/[MITgcm]/MITgcm_contrib/darwin2/verification/monod_baltic_76x72x24/input/data.diagnostics
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Contents of /MITgcm_contrib/darwin2/verification/monod_baltic_76x72x24/input/data.diagnostics

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Revision 1.3 - (show annotations) (download)
Wed Nov 9 23:59:15 2011 UTC (13 years, 9 months ago) by jahn
Branch: MAIN
CVS Tags: ctrb_darwin2_ckpt64k_20130723, ctrb_darwin2_ckpt65w_20160512, ctrb_darwin2_ckpt65j_20150225, ctrb_darwin2_ckpt63l_20120405, ctrb_darwin2_ckpt66g_20170424, ctrb_darwin2_ckpt64h_20130528, ctrb_darwin2_ckpt66k_20171025, ctrb_darwin2_ckpt66n_20180118, ctrb_darwin2_ckpt65v_20160409, ctrb_darwin2_ckpt65s_20160114, ctrb_darwin2_ckpt65_20140718, ctrb_darwin2_ckpt64m_20130820, ctrb_darwin2_ckpt66d_20170214, ctrb_darwin2_ckpt64r_20131210, ctrb_darwin2_ckpt65m_20150615, ctrb_darwin2_ckpt65q_20151118, ctrb_darwin2_ckpt65o_20150914, ctrb_darwin2_ckpt64f_20130405, ctrb_darwin2_ckpt63f_20111201, ctrb_darwin2_ckpt64a_20121116, ctrb_darwin2_ckpt65p_20151023, ctrb_darwin2_ckpt64n_20130826, ctrb_darwin2_ckpt65e_20140929, ctrb_darwin2_ckpt64o_20131024, ctrb_darwin2_ckpt64v_20140411, ctrb_darwin2_ckpt64z_20140711, ctrb_darwin2_ckpt65l_20150504, ctrb_darwin2_ckpt65z_20160929, ctrb_darwin2_ckpt65n_20150729, ctrb_darwin2_ckpt64y_20140622, ctrb_darwin2_ckpt65d_20140915, ctrb_darwin2_ckpt64t_20140202, ctrb_darwin2_ckpt66h_20170602, ctrb_darwin2_ckpt64i_20130622, ctrb_darwin2_ckpt64s_20140105, ctrb_darwin2_ckpt64x_20140524, ctrb_darwin2_ckpt63o_20120629, ctrb_darwin2_ckpt64e_20130305, ctrb_darwin2_ckpt65x_20160612, ctrb_darwin2_ckpt66f_20170407, ctrb_darwin2_ckpt63i_20120124, ctrb_darwin2_ckpt65g_20141120, ctrb_darwin2_ckpt63m_20120506, ctrb_darwin2_ckpt63s_20120908, ctrb_darwin2_ckpt65k_20150402, ctrb_darwin2_ckpt64w_20140502, ctrb_darwin2_ckpt63j_20120217, ctrb_darwin2_ckpt66a_20161020, ctrb_darwin2_ckpt63r_20120817, ctrb_darwin2_ckpt64g_20130503, ctrb_darwin2_ckpt64l_20130806, ctrb_darwin2_ckpt63g_20111220, ctrb_darwin2_ckpt65f_20141014, ctrb_darwin2_ckpt64c_20130120, ctrb_darwin2_ckpt66b_20161219, ctrb_darwin2_ckpt64u_20140308, ctrb_darwin2_ckpt64j_20130704, ctrb_darwin2_ckpt65i_20150123, ctrb_darwin2_ckpt66j_20170815, ctrb_darwin2_ckpt65y_20160801, ctrb_darwin2_ckpt63h_20111230, ctrb_darwin2_ckpt63p_20120707, ctrb_darwin2_ckpt66c_20170121, ctrb_darwin2_ckpt65a_20140728, ctrb_darwin2_ckpt65b_20140812, ctrb_darwin2_ckpt65t_20160221, ctrb_darwin2_ckpt64p_20131118, ctrb_darwin2_ckpt63q_20120731, ctrb_darwin2_ckpt64b_20121224, ctrb_darwin2_ckpt64d_20130219, ctrb_darwin2_ckpt66o_20180209, ctrb_darwin2_ckpt66e_20170314, ctrb_darwin2_ckpt64_20121012, ctrb_darwin2_ckpt64q_20131118, ctrb_darwin2_ckpt64p_20131024, ctrb_darwin2_ckpt65u_20160315, ctrb_darwin2_ckpt65r_20151221, ctrb_darwin2_ckpt66i_20170718, ctrb_darwin2_ckpt63n_20120604, ctrb_darwin2_ckpt63k_20120317, ctrb_darwin2_ckpt65c_20140830, ctrb_darwin2_ckpt66l_20171025, ctrb_darwin2_ckpt65h_20141217, ctrb_darwin2_ckpt66m_20171213, HEAD
Changes since 1.2: +150 -740 lines
compute some diagnostics, add reference diagstats output

1 # Darwin diagnostics
2 # ==================
3 # PAR Photosynthetically active radiation
4 # PP Primary production
5 # Nfix Nitrogen fixation
6 # Rstar01 Rstar^PO4 of Phy01
7 # Diver1 # Phy species over absolute threshold'
8 # Diver2 # Phy species over threshold for proportion of biomass'
9 # Diver3 # Phy species constituting bulk of biomass'
10 # Diver4 # Phy species over threshold for ratio to maximum species'
11 #
12 &diagnostics_list
13 #
14 frequency(1) = 86400.,
15 fields(1,1) = 'THETA ',
16 filename(1) = 'THETA_day',
17 frequency(2) = 86400.,
18 fields(1,2) = 'SALTanom',
19 filename(2) = 'SALTanom_day',
20 frequency(3) = 86400.,
21 fields(1,3) = 'SIarea ',
22 filename(3) = 'SIarea_day',
23 frequency(4) = 86400.,
24 fields(1,4) = 'SIheff ',
25 filename(4) = 'SIheff_day',
26 frequency(5) = 86400.,
27 fields(1,5) = 'SIhsnow ',
28 filename(5) = 'SIhsnow_day',
29 frequency(6) = 86400.,
30 fields(1,6) = 'SIqsw ',
31 filename(6) = 'SIqsw_day',
32 #
33 frequency(11) = 86400.,
34 fields(1,11) = 'PAR ',
35 filename(11) = 'PAR_day',
36 frequency(12) = 86400.,
37 fields(1,12) = 'PP ',
38 filename(12) = 'PP_day',
39 frequency(13) = 86400.,
40 fields(1,13) = 'Nfix ',
41 filename(13) = 'Nfix_day',
42 #
43 frequency(14) = 86400.,
44 fields( 1,14) = 'TRAC01 ',
45 fields( 2,14) = 'TRAC02 ',
46 fields( 3,14) = 'TRAC03 ',
47 fields( 4,14) = 'TRAC04 ',
48 fields( 5,14) = 'TRAC05 ',
49 fields( 6,14) = 'TRAC06 ',
50 fields( 7,14) = 'TRAC07 ',
51 fields( 8,14) = 'TRAC08 ',
52 fields( 9,14) = 'TRAC09 ',
53 fields(10,14) = 'TRAC10 ',
54 fields(11,14) = 'TRAC11 ',
55 fields(12,14) = 'TRAC12 ',
56 fields(13,14) = 'TRAC13 ',
57 fields(14,14) = 'TRAC14 ',
58 fields(15,14) = 'TRAC15 ',
59 fields(16,14) = 'TRAC16 ',
60 fields(17,14) = 'TRAC17 ',
61 fields(18,14) = 'TRAC18 ',
62 fields(19,14) = 'TRAC19 ',
63 fields(20,14) = 'TRAC20 ',
64 fields(21,14) = 'TRAC21 ',
65 fields(22,14) = 'TRAC22 ',
66 fields(23,14) = 'TRAC23 ',
67 fields(24,14) = 'TRAC24 ',
68 fields(25,14) = 'TRAC25 ',
69 fields(26,14) = 'TRAC26 ',
70 fields(27,14) = 'TRAC27 ',
71 fields(28,14) = 'TRAC28 ',
72 fields(29,14) = 'TRAC29 ',
73 fields(30,14) = 'TRAC30 ',
74 fields(31,14) = 'TRAC31 ',
75 fields(32,14) = 'TRAC32 ',
76 fields(33,14) = 'TRAC33 ',
77 fields(34,14) = 'TRAC34 ',
78 fields(35,14) = 'TRAC35 ',
79 fields(36,14) = 'TRAC36 ',
80 fields(37,14) = 'TRAC37 ',
81 fields(38,14) = 'TRAC38 ',
82 fields(39,14) = 'TRAC39 ',
83 fields(40,14) = 'TRAC40 ',
84 fields(41,14) = 'TRAC41 ',
85 fields(42,14) = 'TRAC42 ',
86 fields(43,14) = 'TRAC43 ',
87 fields(44,14) = 'TRAC44 ',
88 fields(45,14) = 'TRAC45 ',
89 fields(46,14) = 'TRAC46 ',
90 fields(47,14) = 'TRAC47 ',
91 fields(48,14) = 'TRAC48 ',
92 fields(49,14) = 'TRAC49 ',
93 fields(50,14) = 'TRAC50 ',
94 fields(51,14) = 'TRAC51 ',
95 fields(52,14) = 'TRAC52 ',
96 fields(53,14) = 'TRAC53 ',
97 fields(54,14) = 'TRAC54 ',
98 fields(55,14) = 'TRAC55 ',
99 fields(56,14) = 'TRAC56 ',
100 fields(57,14) = 'TRAC57 ',
101 fields(58,14) = 'TRAC58 ',
102 fields(59,14) = 'TRAC59 ',
103 fields(60,14) = 'TRAC60 ',
104 fields(61,14) = 'TRAC61 ',
105 fields(62,14) = 'TRAC62 ',
106 fields(63,14) = 'TRAC63 ',
107 fields(64,14) = 'TRAC64 ',
108 fields(65,14) = 'TRAC65 ',
109 fields(66,14) = 'TRAC66 ',
110 fields(67,14) = 'TRAC67 ',
111 fields(68,14) = 'TRAC68 ',
112 fields(69,14) = 'TRAC69 ',
113 fields(70,14) = 'TRAC70 ',
114 fields(71,14) = 'TRAC71 ',
115 fields(72,14) = 'TRAC72 ',
116 fields(73,14) = 'TRAC73 ',
117 fields(74,14) = 'TRAC74 ',
118 fields(75,14) = 'TRAC75 ',
119 fields(76,14) = 'TRAC76 ',
120 fields(77,14) = 'TRAC77 ',
121 fields(78,14) = 'TRAC78 ',
122 fields(79,14) = 'TRAC79 ',
123 fields(80,14) = 'TRAC80 ',
124 fields(81,14) = 'TRAC81 ',
125 fields(82,14) = 'TRAC82 ',
126 fields(83,14) = 'TRAC83 ',
127 fields(84,14) = 'TRAC84 ',
128 fields(85,14) = 'TRAC85 ',
129 fields(86,14) = 'TRAC86 ',
130 fields(87,14) = 'TRAC87 ',
131 fields(88,14) = 'TRAC88 ',
132 fields(89,14) = 'TRAC89 ',
133 fields(90,14) = 'TRAC90 ',
134 fields(91,14) = 'TRAC91 ',
135 fields(92,14) = 'TRAC92 ',
136 fields(93,14) = 'TRAC93 ',
137 fields(94,14) = 'TRAC94 ',
138 fields(95,14) = 'TRAC95 ',
139 fields(96,14) = 'TRAC96 ',
140 fields(97,14) = 'TRAC97 ',
141 fields(98,14) = 'TRAC98 ',
142 fields(99,14) = 'TRAC99 ',
143 filename( 14) = 'ptracers',
144 #
145 frequency(15) = 86400.,
146 fields(1,15) = 'Diver1 ',
147 filename(15) = 'Diver1',
148 frequency(16) = 86400.,
149 fields(1,16) = 'Diver2 ',
150 filename(16) = 'Diver2',
151 frequency(17) = 86400.,
152 fields(1,17) = 'Diver3 ',
153 filename(17) = 'Diver3',
154 frequency(18) = 86400.,
155 fields(1,18) = 'Diver4 ',
156 filename(18) = 'Diver4',
157 frequency(19) = 86400.,
158 fields(1,19) = 'Shannon ',
159 filename(19) = 'Shannon',
160 frequency(20) = 86400.,
161 fields(1,20) = 'Simpson ',
162 filename(20) = 'Simpson',
163 #
164 &
165
166 # Parameter for Diagnostics of per level statistics:
167 #-----------------
168 # for each output-stream:
169 # stat_fname(n) : prefix of the output file name (only 8.c long) for
170 #outp.stream n
171 # stat_freq(n):< 0 : write snap-shot output every |stat_freq| seconds
172 # > 0 : write time-average output every stat_freq seconds
173 # stat_phase(n) : write at time = stat_phase + multiple of |stat_freq|
174 # stat_region(:,n) : list of "regions" (default: 1 region only=global)
175 # stat_fields(:,n) : list of diagnostics fields (8.c) (see
176 #"available_diagnostics.log"
177 # file for the list of all available diag. in this particular
178 #config)
179 #-----------------
180 &DIAG_STATIS_PARMS
181 #- an example just to check the agreement with MONITOR output:
182 stat_fields(1,1)= 'SIqsw '
183 stat_fname(1)= 'stat_SIqsw',
184 stat_freq(1)= 1200.,
185 stat_phase(1)= 0.,
186 stat_fields(1,2)= 'oceQsw '
187 stat_fname(2)= 'stat_oceQsw',
188 stat_freq(2)= 1200.,
189 stat_phase(2)= 0.,
190 stat_fields(1,3)= 'PAR '
191 stat_fname(3)= 'stat_PAR',
192 stat_freq(3)= 1200.,
193 stat_phase(3)= 0.,
194 stat_fields(1,4)= 'EXFswnet'
195 stat_fname(4)= 'stat_EXFswnet',
196 stat_freq(4)= 1200.,
197 stat_phase(4)= 0.,
198 stat_fields(1,5)= 'EXFswdn '
199 stat_fname(5)= 'stat_EXFswdn',
200 stat_freq(5)= 1200.,
201 stat_phase(5)= 0.,
202 stat_fields(1,6)= 'THETA '
203 stat_fname(6)= 'stat_THETA',
204 stat_freq(6)= 1200.,
205 stat_phase(6)= 0.,
206 stat_fields(1,7)= 'SALTanom'
207 stat_fname(7)= 'stat_SALTanom',
208 stat_freq(7)= 1200.,
209 stat_phase(7)= 0.,
210 stat_fields(1,8)= 'PP '
211 stat_fname(8)= 'stat_PP',
212 stat_freq(8)= 1200.,
213 stat_phase(8)= 0.,
214 stat_fields(1,9)= 'TRAC79 '
215 stat_fname(9)= 'stat_Phy58',
216 stat_freq(9)= 1200.,
217 stat_phase(9)= 0.,
218 stat_fields(1,10)= 'ETAN '
219 stat_fname(10)= 'stat_ETAN',
220 stat_freq(10)= 1200.,
221 stat_phase(10)= 0.,
222 stat_fields(1,11)= 'TRAC03 '
223 stat_fname(11)= 'stat_FeT',
224 stat_freq(11)= 1200.,
225 stat_phase(11)= 0.,
226 stat_fields(1,12)= 'Diver1 '
227 stat_fname(12)= 'stat_Diver1',
228 stat_freq(12)= 1200.,
229 stat_phase(12)= 0.,
230 stat_fields(1,13)= 'Diver2 '
231 stat_fname(13)= 'stat_Diver2',
232 stat_freq(13)= 1200.,
233 stat_phase(13)= 0.,
234 stat_fields(1,14)= 'Diver3 '
235 stat_fname(14)= 'stat_Diver3',
236 stat_freq(14)= 1200.,
237 stat_phase(14)= 0.,
238 stat_fields(1,15)= 'Diver4 '
239 stat_fname(15)= 'stat_Diver4',
240 stat_freq(15)= 1200.,
241 stat_phase(15)= 0.,
242 stat_fields(1,16)= 'Shannon '
243 stat_fname(16)= 'stat_Shannon',
244 stat_freq(16)= 1200.,
245 stat_phase(16)= 0.,
246 stat_fields(1,17)= 'Simpson '
247 stat_fname(17)= 'stat_Simpson',
248 stat_freq(17)= 1200.,
249 stat_phase(17)= 0.,
250 &

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