/[MITgcm]/MITgcm_contrib/darwin2/verification/monod_baltic_76x72x24/input/data.diagnostics
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Annotation of /MITgcm_contrib/darwin2/verification/monod_baltic_76x72x24/input/data.diagnostics

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Revision 1.3 - (hide annotations) (download)
Wed Nov 9 23:59:15 2011 UTC (13 years, 9 months ago) by jahn
Branch: MAIN
CVS Tags: ctrb_darwin2_ckpt64k_20130723, ctrb_darwin2_ckpt65w_20160512, ctrb_darwin2_ckpt65j_20150225, ctrb_darwin2_ckpt63l_20120405, ctrb_darwin2_ckpt66g_20170424, ctrb_darwin2_ckpt64h_20130528, ctrb_darwin2_ckpt66k_20171025, ctrb_darwin2_ckpt66n_20180118, ctrb_darwin2_ckpt65v_20160409, ctrb_darwin2_ckpt65s_20160114, ctrb_darwin2_ckpt65_20140718, ctrb_darwin2_ckpt64m_20130820, ctrb_darwin2_ckpt66d_20170214, ctrb_darwin2_ckpt64r_20131210, ctrb_darwin2_ckpt65m_20150615, ctrb_darwin2_ckpt65q_20151118, ctrb_darwin2_ckpt65o_20150914, ctrb_darwin2_ckpt64f_20130405, ctrb_darwin2_ckpt63f_20111201, ctrb_darwin2_ckpt64a_20121116, ctrb_darwin2_ckpt65p_20151023, ctrb_darwin2_ckpt64n_20130826, ctrb_darwin2_ckpt65e_20140929, ctrb_darwin2_ckpt64o_20131024, ctrb_darwin2_ckpt64v_20140411, ctrb_darwin2_ckpt64z_20140711, ctrb_darwin2_ckpt65l_20150504, ctrb_darwin2_ckpt65z_20160929, ctrb_darwin2_ckpt65n_20150729, ctrb_darwin2_ckpt64y_20140622, ctrb_darwin2_ckpt65d_20140915, ctrb_darwin2_ckpt64t_20140202, ctrb_darwin2_ckpt66h_20170602, ctrb_darwin2_ckpt64i_20130622, ctrb_darwin2_ckpt64s_20140105, ctrb_darwin2_ckpt64x_20140524, ctrb_darwin2_ckpt63o_20120629, ctrb_darwin2_ckpt64e_20130305, ctrb_darwin2_ckpt65x_20160612, ctrb_darwin2_ckpt66f_20170407, ctrb_darwin2_ckpt63i_20120124, ctrb_darwin2_ckpt65g_20141120, ctrb_darwin2_ckpt63m_20120506, ctrb_darwin2_ckpt63s_20120908, ctrb_darwin2_ckpt65k_20150402, ctrb_darwin2_ckpt64w_20140502, ctrb_darwin2_ckpt63j_20120217, ctrb_darwin2_ckpt66a_20161020, ctrb_darwin2_ckpt63r_20120817, ctrb_darwin2_ckpt64g_20130503, ctrb_darwin2_ckpt64l_20130806, ctrb_darwin2_ckpt63g_20111220, ctrb_darwin2_ckpt65f_20141014, ctrb_darwin2_ckpt64c_20130120, ctrb_darwin2_ckpt66b_20161219, ctrb_darwin2_ckpt64u_20140308, ctrb_darwin2_ckpt64j_20130704, ctrb_darwin2_ckpt65i_20150123, ctrb_darwin2_ckpt66j_20170815, ctrb_darwin2_ckpt65y_20160801, ctrb_darwin2_ckpt63h_20111230, ctrb_darwin2_ckpt63p_20120707, ctrb_darwin2_ckpt66c_20170121, ctrb_darwin2_ckpt65a_20140728, ctrb_darwin2_ckpt65b_20140812, ctrb_darwin2_ckpt65t_20160221, ctrb_darwin2_ckpt64p_20131118, ctrb_darwin2_ckpt63q_20120731, ctrb_darwin2_ckpt64b_20121224, ctrb_darwin2_ckpt64d_20130219, ctrb_darwin2_ckpt66o_20180209, ctrb_darwin2_ckpt66e_20170314, ctrb_darwin2_ckpt64_20121012, ctrb_darwin2_ckpt64q_20131118, ctrb_darwin2_ckpt64p_20131024, ctrb_darwin2_ckpt65u_20160315, ctrb_darwin2_ckpt65r_20151221, ctrb_darwin2_ckpt66i_20170718, ctrb_darwin2_ckpt63n_20120604, ctrb_darwin2_ckpt63k_20120317, ctrb_darwin2_ckpt65c_20140830, ctrb_darwin2_ckpt66l_20171025, ctrb_darwin2_ckpt65h_20141217, ctrb_darwin2_ckpt66m_20171213, HEAD
Changes since 1.2: +150 -740 lines
compute some diagnostics, add reference diagstats output

1 jahn 1.1 # Darwin diagnostics
2     # ==================
3     # PAR Photosynthetically active radiation
4     # PP Primary production
5     # Nfix Nitrogen fixation
6     # Rstar01 Rstar^PO4 of Phy01
7     # Diver1 # Phy species over absolute threshold'
8     # Diver2 # Phy species over threshold for proportion of biomass'
9     # Diver3 # Phy species constituting bulk of biomass'
10     # Diver4 # Phy species over threshold for ratio to maximum species'
11     #
12     &diagnostics_list
13     #
14     frequency(1) = 86400.,
15     fields(1,1) = 'THETA ',
16     filename(1) = 'THETA_day',
17     frequency(2) = 86400.,
18     fields(1,2) = 'SALTanom',
19     filename(2) = 'SALTanom_day',
20     frequency(3) = 86400.,
21     fields(1,3) = 'SIarea ',
22     filename(3) = 'SIarea_day',
23     frequency(4) = 86400.,
24     fields(1,4) = 'SIheff ',
25     filename(4) = 'SIheff_day',
26     frequency(5) = 86400.,
27     fields(1,5) = 'SIhsnow ',
28     filename(5) = 'SIhsnow_day',
29     frequency(6) = 86400.,
30     fields(1,6) = 'SIqsw ',
31     filename(6) = 'SIqsw_day',
32     #
33     frequency(11) = 86400.,
34     fields(1,11) = 'PAR ',
35     filename(11) = 'PAR_day',
36     frequency(12) = 86400.,
37     fields(1,12) = 'PP ',
38     filename(12) = 'PP_day',
39     frequency(13) = 86400.,
40     fields(1,13) = 'Nfix ',
41     filename(13) = 'Nfix_day',
42     #
43 jahn 1.3 frequency(14) = 86400.,
44     fields( 1,14) = 'TRAC01 ',
45     fields( 2,14) = 'TRAC02 ',
46     fields( 3,14) = 'TRAC03 ',
47     fields( 4,14) = 'TRAC04 ',
48     fields( 5,14) = 'TRAC05 ',
49     fields( 6,14) = 'TRAC06 ',
50     fields( 7,14) = 'TRAC07 ',
51     fields( 8,14) = 'TRAC08 ',
52     fields( 9,14) = 'TRAC09 ',
53     fields(10,14) = 'TRAC10 ',
54     fields(11,14) = 'TRAC11 ',
55     fields(12,14) = 'TRAC12 ',
56     fields(13,14) = 'TRAC13 ',
57     fields(14,14) = 'TRAC14 ',
58     fields(15,14) = 'TRAC15 ',
59     fields(16,14) = 'TRAC16 ',
60     fields(17,14) = 'TRAC17 ',
61     fields(18,14) = 'TRAC18 ',
62     fields(19,14) = 'TRAC19 ',
63     fields(20,14) = 'TRAC20 ',
64     fields(21,14) = 'TRAC21 ',
65     fields(22,14) = 'TRAC22 ',
66     fields(23,14) = 'TRAC23 ',
67     fields(24,14) = 'TRAC24 ',
68     fields(25,14) = 'TRAC25 ',
69     fields(26,14) = 'TRAC26 ',
70     fields(27,14) = 'TRAC27 ',
71     fields(28,14) = 'TRAC28 ',
72     fields(29,14) = 'TRAC29 ',
73     fields(30,14) = 'TRAC30 ',
74     fields(31,14) = 'TRAC31 ',
75     fields(32,14) = 'TRAC32 ',
76     fields(33,14) = 'TRAC33 ',
77     fields(34,14) = 'TRAC34 ',
78     fields(35,14) = 'TRAC35 ',
79     fields(36,14) = 'TRAC36 ',
80     fields(37,14) = 'TRAC37 ',
81     fields(38,14) = 'TRAC38 ',
82     fields(39,14) = 'TRAC39 ',
83     fields(40,14) = 'TRAC40 ',
84     fields(41,14) = 'TRAC41 ',
85     fields(42,14) = 'TRAC42 ',
86     fields(43,14) = 'TRAC43 ',
87     fields(44,14) = 'TRAC44 ',
88     fields(45,14) = 'TRAC45 ',
89     fields(46,14) = 'TRAC46 ',
90     fields(47,14) = 'TRAC47 ',
91     fields(48,14) = 'TRAC48 ',
92     fields(49,14) = 'TRAC49 ',
93     fields(50,14) = 'TRAC50 ',
94     fields(51,14) = 'TRAC51 ',
95     fields(52,14) = 'TRAC52 ',
96     fields(53,14) = 'TRAC53 ',
97     fields(54,14) = 'TRAC54 ',
98     fields(55,14) = 'TRAC55 ',
99     fields(56,14) = 'TRAC56 ',
100     fields(57,14) = 'TRAC57 ',
101     fields(58,14) = 'TRAC58 ',
102     fields(59,14) = 'TRAC59 ',
103     fields(60,14) = 'TRAC60 ',
104     fields(61,14) = 'TRAC61 ',
105     fields(62,14) = 'TRAC62 ',
106     fields(63,14) = 'TRAC63 ',
107     fields(64,14) = 'TRAC64 ',
108     fields(65,14) = 'TRAC65 ',
109     fields(66,14) = 'TRAC66 ',
110     fields(67,14) = 'TRAC67 ',
111     fields(68,14) = 'TRAC68 ',
112     fields(69,14) = 'TRAC69 ',
113     fields(70,14) = 'TRAC70 ',
114     fields(71,14) = 'TRAC71 ',
115     fields(72,14) = 'TRAC72 ',
116     fields(73,14) = 'TRAC73 ',
117     fields(74,14) = 'TRAC74 ',
118     fields(75,14) = 'TRAC75 ',
119     fields(76,14) = 'TRAC76 ',
120     fields(77,14) = 'TRAC77 ',
121     fields(78,14) = 'TRAC78 ',
122     fields(79,14) = 'TRAC79 ',
123     fields(80,14) = 'TRAC80 ',
124     fields(81,14) = 'TRAC81 ',
125     fields(82,14) = 'TRAC82 ',
126     fields(83,14) = 'TRAC83 ',
127     fields(84,14) = 'TRAC84 ',
128     fields(85,14) = 'TRAC85 ',
129     fields(86,14) = 'TRAC86 ',
130     fields(87,14) = 'TRAC87 ',
131     fields(88,14) = 'TRAC88 ',
132     fields(89,14) = 'TRAC89 ',
133     fields(90,14) = 'TRAC90 ',
134     fields(91,14) = 'TRAC91 ',
135     fields(92,14) = 'TRAC92 ',
136     fields(93,14) = 'TRAC93 ',
137     fields(94,14) = 'TRAC94 ',
138     fields(95,14) = 'TRAC95 ',
139     fields(96,14) = 'TRAC96 ',
140     fields(97,14) = 'TRAC97 ',
141     fields(98,14) = 'TRAC98 ',
142     fields(99,14) = 'TRAC99 ',
143     filename( 14) = 'ptracers',
144 jahn 1.1 #
145 jahn 1.3 frequency(15) = 86400.,
146     fields(1,15) = 'Diver1 ',
147     filename(15) = 'Diver1',
148     frequency(16) = 86400.,
149     fields(1,16) = 'Diver2 ',
150     filename(16) = 'Diver2',
151 jahn 1.1 frequency(17) = 86400.,
152 jahn 1.3 fields(1,17) = 'Diver3 ',
153     filename(17) = 'Diver3',
154 jahn 1.1 frequency(18) = 86400.,
155 jahn 1.3 fields(1,18) = 'Diver4 ',
156     filename(18) = 'Diver4',
157 jahn 1.1 frequency(19) = 86400.,
158 jahn 1.3 fields(1,19) = 'Shannon ',
159     filename(19) = 'Shannon',
160 jahn 1.1 frequency(20) = 86400.,
161 jahn 1.3 fields(1,20) = 'Simpson ',
162     filename(20) = 'Simpson',
163 jahn 1.1 #
164     &
165    
166     # Parameter for Diagnostics of per level statistics:
167     #-----------------
168     # for each output-stream:
169     # stat_fname(n) : prefix of the output file name (only 8.c long) for
170     #outp.stream n
171     # stat_freq(n):< 0 : write snap-shot output every |stat_freq| seconds
172     # > 0 : write time-average output every stat_freq seconds
173     # stat_phase(n) : write at time = stat_phase + multiple of |stat_freq|
174     # stat_region(:,n) : list of "regions" (default: 1 region only=global)
175     # stat_fields(:,n) : list of diagnostics fields (8.c) (see
176     #"available_diagnostics.log"
177     # file for the list of all available diag. in this particular
178     #config)
179     #-----------------
180     &DIAG_STATIS_PARMS
181     #- an example just to check the agreement with MONITOR output:
182     stat_fields(1,1)= 'SIqsw '
183 jahn 1.3 stat_fname(1)= 'stat_SIqsw',
184 jahn 1.1 stat_freq(1)= 1200.,
185     stat_phase(1)= 0.,
186     stat_fields(1,2)= 'oceQsw '
187 jahn 1.3 stat_fname(2)= 'stat_oceQsw',
188 jahn 1.1 stat_freq(2)= 1200.,
189     stat_phase(2)= 0.,
190     stat_fields(1,3)= 'PAR '
191 jahn 1.3 stat_fname(3)= 'stat_PAR',
192 jahn 1.1 stat_freq(3)= 1200.,
193     stat_phase(3)= 0.,
194     stat_fields(1,4)= 'EXFswnet'
195 jahn 1.3 stat_fname(4)= 'stat_EXFswnet',
196 jahn 1.1 stat_freq(4)= 1200.,
197     stat_phase(4)= 0.,
198     stat_fields(1,5)= 'EXFswdn '
199 jahn 1.3 stat_fname(5)= 'stat_EXFswdn',
200 jahn 1.1 stat_freq(5)= 1200.,
201     stat_phase(5)= 0.,
202     stat_fields(1,6)= 'THETA '
203 jahn 1.3 stat_fname(6)= 'stat_THETA',
204 jahn 1.1 stat_freq(6)= 1200.,
205     stat_phase(6)= 0.,
206     stat_fields(1,7)= 'SALTanom'
207 jahn 1.3 stat_fname(7)= 'stat_SALTanom',
208 jahn 1.1 stat_freq(7)= 1200.,
209     stat_phase(7)= 0.,
210     stat_fields(1,8)= 'PP '
211 jahn 1.3 stat_fname(8)= 'stat_PP',
212 jahn 1.1 stat_freq(8)= 1200.,
213     stat_phase(8)= 0.,
214     stat_fields(1,9)= 'TRAC79 '
215 jahn 1.3 stat_fname(9)= 'stat_Phy58',
216 jahn 1.1 stat_freq(9)= 1200.,
217     stat_phase(9)= 0.,
218     stat_fields(1,10)= 'ETAN '
219 jahn 1.3 stat_fname(10)= 'stat_ETAN',
220 jahn 1.1 stat_freq(10)= 1200.,
221     stat_phase(10)= 0.,
222     stat_fields(1,11)= 'TRAC03 '
223 jahn 1.3 stat_fname(11)= 'stat_FeT',
224 jahn 1.1 stat_freq(11)= 1200.,
225     stat_phase(11)= 0.,
226 jahn 1.3 stat_fields(1,12)= 'Diver1 '
227     stat_fname(12)= 'stat_Diver1',
228     stat_freq(12)= 1200.,
229     stat_phase(12)= 0.,
230     stat_fields(1,13)= 'Diver2 '
231     stat_fname(13)= 'stat_Diver2',
232     stat_freq(13)= 1200.,
233     stat_phase(13)= 0.,
234     stat_fields(1,14)= 'Diver3 '
235     stat_fname(14)= 'stat_Diver3',
236     stat_freq(14)= 1200.,
237     stat_phase(14)= 0.,
238     stat_fields(1,15)= 'Diver4 '
239     stat_fname(15)= 'stat_Diver4',
240     stat_freq(15)= 1200.,
241     stat_phase(15)= 0.,
242     stat_fields(1,16)= 'Shannon '
243     stat_fname(16)= 'stat_Shannon',
244     stat_freq(16)= 1200.,
245     stat_phase(16)= 0.,
246     stat_fields(1,17)= 'Simpson '
247     stat_fname(17)= 'stat_Simpson',
248     stat_freq(17)= 1200.,
249     stat_phase(17)= 0.,
250 jahn 1.1 &

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