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Revision 1.30 - (hide annotations) (download)
Thu Aug 30 16:51:50 2007 UTC (13 years, 11 months ago) by jmc
Branch: MAIN
CVS Tags: HEAD
Changes since 1.29: +0 -0 lines
FILE REMOVED
not maintained for 3 years ; removed.

1 adcroft 1.8 #!/bin/sh
2 adcroft 1.1
3 adcroft 1.8 compare_lines()
4     {
5     # use codelet to compare lines
6 adcroft 1.9 if [ $verbose -gt 1 ]; then
7     cat tmp3.txt 1>&2
8     fi
9 adcroft 1.8 return `./a.out < tmp3.txt`
10     }
11    
12     testoutput_for_prop()
13     {
14 adcroft 1.23 # testoutput_for_prop dir s1 label subdir
15 adcroft 1.8 #
16 adcroft 1.23 # compares files in $dir/$subdir/output.txt and $dir/results/output.txt
17 adcroft 1.8 # using search strings s1 and text label
18    
19     if [ $debug -gt 0 ]; then
20 adcroft 1.23 echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2
21 adcroft 1.8 fi
22 adcroft 1.23 if [ -r $1/$4/output.txt ]; then
23     grep "$2" $1/$4/output.txt | sed 's/.*=//' | nl > tmp1.txt
24 adcroft 1.22 lncnt=`wc -l tmp1.txt | awk '{print $1}' `
25     if [ $lncnt -lt 3 ]; then
26     if [ $verbose -gt 0 ]; then
27     echo Not enough lines of output when searching for "$2" 1>&2
28     fi
29     return 99
30     fi
31 adcroft 1.1 else
32 adcroft 1.8 echo testoutput_for_prop: output.txt from model run was not readable 1>&2
33     return 99
34     fi
35     if [ $debug -gt 0 ]; then
36     echo testoutput_for_prop: grep "$2" $1/results/output.txt 1>&2
37     fi
38     grep "$2" $1/results/output.txt | sed 's/.*=//' | nl > tmp2.txt
39 adcroft 1.22 lncnt=`wc -l tmp2.txt | awk '{print $1}' `
40     if [ $lncnt -lt 3 ]; then
41     if [ $verbose -gt 0 ]; then
42     echo Not enough lines of output when searching for "$2" 1>&2
43     fi
44     return 99
45     fi
46 adcroft 1.8 if [ $debug -gt 0 ]; then
47     echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2
48     fi
49     join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
50     if [ $debug -gt 0 ]; then
51     echo testoutput_for_prop: compare_lines 1>&2
52     fi
53 adcroft 1.9 compare_lines
54 adcroft 1.8 digits_of_similarity=$?
55     if [ $digits_of_similarity -eq 99 ]; then
56     if [ $verbose -gt 0 ]; then
57     echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2
58     fi
59     digits_of_similarity=99
60     else
61     if [ $verbose -gt 0 ]; then
62     echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2
63     fi
64     fi
65     rm tmp1.txt tmp2.txt tmp3.txt
66    
67     return $digits_of_similarity
68     }
69    
70     dashnum()
71     {
72     # dashnum n1 n2 n3 ...
73     #
74     # print numbers using %3i format or "--" if number = 99
75     for num in $@
76     do
77     if [ $num = 99 ]; then
78     printf ' --'
79     else
80     printf '%3i' $num
81     fi
82     done
83     }
84    
85     testoutput()
86     {
87 adcroft 1.23 # testoutput diretory subdir
88 adcroft 1.8 #
89     # test output in "directory"
90    
91     if [ $debug -gt 0 ]; then
92     echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2
93     fi
94 adcroft 1.23 testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2; cg2dres=$?
95 adcroft 1.8 if [ $debug -gt 0 ]; then
96     echo testoutput: cg2dres=$cg2dres 1>&2
97     fi
98    
99 adcroft 1.10 if [ $longtest -gt 0 ]; then
100 adcroft 1.23 testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$?
101     testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$?
102     testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2; tmean=$?
103     testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2; tsd=$?
104     testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$?
105     testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$?
106     testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2; smean=$?
107     testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2; ssd=$?
108     testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$?
109     testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$?
110     testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2; umean=$?
111     testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2; usd=$?
112     testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$?
113     testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$?
114     testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2; vmean=$?
115     testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2; vsd=$?
116 adcroft 1.8 else
117 adcroft 1.23 testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$?
118     testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$?
119     testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$?
120     testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$?
121     testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$?
122     testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$?
123     testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$?
124     testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$?
125 adcroft 1.8 fi
126    
127     dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \
128     $umin $umax $umean $usd $vmin $vmax $vmean $vsd
129     #printf '%3i' $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \
130     # $umin $umax $umean $usd $vmin $vmax $vmean $vsd
131     }
132    
133     genmakemodel()
134     {
135     # genmakemodel directory
136     ( cd $1;
137     if [ $quick -eq 0 -o ! -r Makefile ]; then
138     printf 'genmake ... ' 1>&2
139 adcroft 1.28 find . -type l -exec rm {} \;
140 adcroft 1.13 if [ $ieee -eq 0 ]; then
141 adcroft 1.26 ../../../tools/genmake2 -mods=../code > make.log 2>&1
142 adcroft 1.13 else
143 adcroft 1.26 ../../../tools/genmake2 -ieee -mods=../code > make.log 2>&1
144 adcroft 1.13 fi
145 adcroft 1.8 if [ $? -ne 0 ]; then
146     tail make.log
147 edhill 1.25 echo genmakemodel: $genmake failed 1>&2
148 adcroft 1.8 return 1
149     else
150     echo succesful 1>&2
151     fi
152     fi
153     )
154     }
155    
156 adcroft 1.18 makecleancompile()
157 adcroft 1.10 {
158 adcroft 1.18 # makecleancompile directory
159     ( cd $1;
160     if [ $force -gt 0 ]; then
161     rm -f output.txt
162     printf 'make clean ... ' 2>&1
163     make CLEAN >> make.log 2>&1
164     if [ $? -ne 0 ]; then
165     tail make.log
166     echo makecleancompile: make clean failed 1>&2
167     return 1
168     else
169     echo succesful 1>&2
170     fi
171     fi
172     )
173     }
174    
175     makecleanupafter()
176     {
177     # makeupafter directory
178 adcroft 1.10 ( cd $1;
179     if [ $clean -gt 0 ]; then
180 adcroft 1.15 rm -f output.txt
181 adcroft 1.10 printf 'make clean ... ' 2>&1
182     make CLEAN >> make.log 2>&1
183     if [ $? -ne 0 ]; then
184     tail make.log
185 adcroft 1.18 echo makeupafter: make clean failed 1>&2
186 adcroft 1.10 return 1
187     else
188     echo succesful 1>&2
189     fi
190     fi
191     )
192     }
193    
194 adcroft 1.8 makedependmodel()
195     {
196     # makedependmodel directory
197     ( cd $1;
198     if [ $quick -eq 0 -o ! -r Makefile ]; then
199     printf 'make depend ... ' 1>&2
200     make cleanlinks >> make.log 2>&1
201     make depend >> make.log 2>&1
202     if [ $? -ne 0 ]; then
203     tail make.log
204     echo makemodel: make depend failed 1>&2
205     return 1
206     else
207     echo succesful 1>&2
208     fi
209     fi
210     )
211     }
212    
213     makemodel()
214     {
215     # makemodel directory
216     ( cd $1;
217     if [ -r Makefile ]; then
218     printf 'make ... ' 1>&2
219     make >> make.log 2>&1
220     if [ $? -ne 0 ]; then
221     tail make.log
222     echo failed 1>&2
223     return 1
224     else
225     echo succesful 1>&2
226     fi
227     fi
228     )
229     }
230    
231 adcroft 1.23 linkdata()
232     {
233 adcroft 1.27 # linkdata flag
234     #
235     # symbolically link data files to run directory
236     if test "x$1" = x1 ; then
237     (
238     cd $2
239     if test "x$ADM" = x ; then
240     files=`( cd ../input ; ls -1 | grep -v CVS )`
241     for i in $files ; do
242     if test ! -d "../input/"$i ; then
243     ln -sf "../input/"$i $i
244     fi
245     done
246     else
247     files=`( cd ../input ; ls -1 *.bin | grep -v CVS )`
248     for i in $files ; do
249     if test ! -d "../input/"$i ; then
250     ln -sf "../input/"$i $i
251     fi
252     done
253     files=`( cd ../input_ad ; ls -1 | grep -v CVS )`
254     for i in $files ; do
255     if test ! -d "../input_ad/"$i ; then
256     ln -sf "../input_ad/"$i $i
257     fi
258     done
259     fi
260     )
261     fi
262 adcroft 1.23 }
263    
264 adcroft 1.8 runmodel()
265     {
266     # runmodel directory exe
267     #
268     # runs the model "exe" in "directory" (exe is relative to directory)
269    
270     ( cd $1
271     if [ -x $2 ]; then
272 adcroft 1.16 if [ $quick -eq 0 ]; then
273 adcroft 1.15 rm -f output.txt
274 adcroft 1.8 fi
275 adcroft 1.27 if [ $debug -gt 0 ]; then
276     echo -n runmodel: pwd= 1>&2
277     pwd 1>&2
278     fi
279 adcroft 1.19 printf 'runmodel: ' 1>&2
280 adcroft 1.29 rm -f *.nc
281 adcroft 1.23 make output.txt && return 0
282     return 1
283 adcroft 1.8 fi
284     )
285     }
286    
287 adcroft 1.27 copynewresults()
288     {
289     # copynewresults directory
290     #
291     # runs the model "exe" in "directory" (exe is relative to directory)
292    
293     ( cd $1
294     if [ $newresults -eq 1 ]; then
295     if [ -r output.txt ]; then
296     cp -f output.txt ../results/
297     return 0
298     fi
299     fi
300     )
301     }
302    
303 adcroft 1.8 createcodelet()
304     {
305     # create codelet for comparing model output
306     cat > tmp_cmpnum.f <<EOFA
307     program cmpnum
308     implicit none
309     real*8 a,b,diff
310     integer linnum,best
311     best=-16
312     99 read(*,*,end=70,err=60) linnum,a,b
313     diff=0.5*(abs(a)+abs(b))
314 adcroft 1.9 c print *,a,b,diff,abs(a-b)/diff
315     if (diff.gt.1.e-12) then
316 adcroft 1.8 diff=abs(a-b)/diff
317     if (diff.gt.0.) then
318     c print *,int(log10(diff)),diff
319     linnum=int(log10(diff))
320     best=max(best,linnum)
321     endif
322 adcroft 1.9 else
323     if (best.eq.-16.and.diff.ne.0.) best=-22
324 adcroft 1.1 endif
325 adcroft 1.8 goto 99
326     60 stop 'cmpnum: An error occured reading a,b'
327     70 print *,-best
328     end
329     EOFA
330     f77 tmp_cmpnum.f
331     if [ -x ./a.out ]; then
332     return 0
333     else
334     echo createcodelet: failed to compile codelet 1>&2
335     exit 1
336     fi
337     }
338    
339     formatresults()
340     {
341     # formatresults expt genmake depend make run results*
342    
343     nm=$1
344     printf '%s %s %s %s' $2 $3 $4 $5
345     shift; shift; shift; shift; shift;
346     printf '%3s' $@
347    
348     if [ $1 = '--' ]; then
349     printf ' N/O '
350     else
351     if [ $1 -gt 12 ]; then
352     printf ' pass'
353 adcroft 1.1 else
354 adcroft 1.8 printf ' FAIL'
355     fi
356     fi
357     printf ' %s' $nm
358     printf '\n'
359    
360     }
361    
362     show_help()
363     {
364     cat - << EOF
365     $0 [-help] [-quick] [-verbose] dir1 [dir2] [...]
366     -help Show this help message
367     -quick Skip "genmake" and "make depend" if the Makefile exists
368 adcroft 1.27 -newresults Copy the output.txt into results/
369 adcroft 1.8 -quiet Reduce the amount of output
370     -verbose Produce copious amounts of output
371 adcroft 1.10 -debug Produce even more output which will mean nothing to most
372 adcroft 1.18 -force Do "make CLEAN" before compiling. This forces a complete rebuild.
373     -clean Do "make CLEAN" after compiling and testing.
374 adcroft 1.20 -shorttest Don't compare numeric output for mean and s.d. of variables.
375 adcroft 1.14 -noieee By default, $0 uses the -ieee option for genmake. This turns it off.
376 adcroft 1.21 -cleanup Aggresively removes all model output, executables and object files
377     and then exits. Use with care.
378 adcroft 1.8
379     Normal usage:
380     $0 * Configure, compile, run and analyze in all experiment directories
381     EOF
382     }
383    
384 adcroft 1.11 scandirs()
385     {
386     if [ $# -eq 0 ]; then
387     for arg in *
388     do
389     test -d $arg/input && echo $arg
390     done
391     else
392     echo $*
393     fi
394     }
395    
396 adcroft 1.21 clean_up()
397     {
398     # Find all executables, object files, CPP'd source and model output
399     # and DELETE it.
400 adcroft 1.23 for opt in '-name "mitgcmuv*"' '-name "*.o"' '-name "*.f"' '-name "*.c"' '-name "fort.*"' '-name "make.log"' '-path *results -prune -o -name "*.meta"' '-path *results -prune -o -name "*.data"' '-type l'
401 adcroft 1.21 do
402     echo Cleaning: find . $opt -exec rm {} \;
403     find . $opt -exec rm {} \;
404     done
405     }
406    
407 adcroft 1.8 ###############################################################################
408 adcroft 1.23 ###############################################################################
409     ###############################################################################
410 adcroft 1.8
411     # Main function
412    
413     # Default properties
414     debug=0
415     verbose=1
416     quick=0
417 adcroft 1.27 newresults=0
418 adcroft 1.18 force=0
419 adcroft 1.10 clean=0
420 adcroft 1.14 ieee=1
421 adcroft 1.20 longtest=1
422 adcroft 1.8 expts=''
423 edhill 1.25 genmake=genmake
424 adcroft 1.8
425     # Process arguments
426     for arg in $@
427     do
428     case $arg in
429 adcroft 1.21 -cleanup) clean_up; exit 0;;
430 adcroft 1.8 -quick) quick=1;;
431 adcroft 1.27 -newresults) newresults=1;;
432 adcroft 1.8 -verbose) verbose=2;;
433     -debug) debug=1;;
434 adcroft 1.18 -force) force=1;;
435 adcroft 1.10 -clean) clean=1;;
436 adcroft 1.14 -noieee) ieee=0;;
437 adcroft 1.20 -shorttest) longtest=0;;
438 adcroft 1.8 -quiet) verbose=0;;
439     -help) show_help; exit 0;;
440 adcroft 1.13 -*) echo Unrecognized option:$arg; exit 9;;
441 adcroft 1.8 *) test -d $arg && expts=`echo $expts $arg`;;
442     esac
443     done
444 adcroft 1.15
445 adcroft 1.18 if [ $force -gt 0 -a $quick -gt 0 ]; then
446     echo You specified -quick and -force together which conflict.
447     echo Please specify either -quick or -force or neither but not both.
448 adcroft 1.15 exit 1
449     fi
450 adcroft 1.8
451 adcroft 1.11 #if [ ${#expts} -eq 0 ]; then
452     # echo Scanning all directories
453     # for arg in *
454     # do
455     # test -d $arg && expts=`echo $expts $arg`
456     # done
457     #fi
458     expts=`scandirs $expts`
459 adcroft 1.8
460     createcodelet
461    
462 jmc 1.24 date > summary.txt
463 adcroft 1.10 if [ $longtest -gt 0 ]; then
464 jmc 1.24 cat << EOF >> summary.txt
465 adcroft 1.8 T S U V
466     C D M c m s m s m s m s
467     n p a R g m m e . m m e . m m e . m m e .
468     f n k u 2 i a a d i a a d i a a d i a a d
469     g d e n d n x n . n x n . n x n . n x n .
470    
471     EOF
472     else
473 jmc 1.24 cat << EOF >> summary.txt
474 adcroft 1.8 T S U V
475     C D M c
476     n p a R g m m m m m m m m
477     f n k u 2 i a i a i a i a
478     g d e n d n x n x n x n x
479    
480     EOF
481     fi
482    
483     # Now configue, make, run and test in each directory
484     for dir in $expts
485     do
486     if [ -r $dir/results/output.txt ]; then
487     echo -------------------------------------------------------------------------------
488     echo
489     echo Experiment: $dir
490     echo
491 edhill 1.25 unset genmakepass makedepend make run
492 adcroft 1.12 if [ $longtest -gt 0 ]; then
493     results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --'
494     else
495     results='-- -- -- -- -- -- -- -- --'
496     fi
497 adcroft 1.23 if [ -r $dir/build ]; then
498     seperatebuilddir=1
499     builddir=build
500     rundir=build
501 adcroft 1.27 (cd $dir/input; rm -f *.{o,f,c,F,h} work* output.txt Make* make.log; )
502 adcroft 1.23 else
503     seperatebuilddir=0
504     builddir=input
505     rundir=input
506     fi
507 edhill 1.25 genmakemodel $dir/$builddir && genmakepass=Y \
508 adcroft 1.23 && makecleancompile $dir/$builddir \
509     && makedependmodel $dir/$builddir && makedepend=Y \
510     && makemodel $dir/$builddir && make=Y \
511     && linkdata $seperatebuilddir $dir/$rundir \
512     && runmodel $dir/$builddir mitgcmuv && run=Y \
513     && results=`testoutput $dir $rundir` \
514 adcroft 1.27 && copynewresults $dir/$rundir \
515 adcroft 1.23 && makecleanupafter $dir/$builddir
516 adcroft 1.8 echo
517 edhill 1.25 formatresults $dir ${genmakepass:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results
518 adcroft 1.8 echo
519 edhill 1.25 formatresults $dir ${genmakepass:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results >> summary.txt
520 adcroft 1.8 fi
521     done
522    
523     rm tmp_cmpnum.f a.out
524 adcroft 1.1
525 adcroft 1.8 echo -------------------------------------------------------------------------------
526     echo
527 jmc 1.24 date >> summary.txt
528 adcroft 1.1 cat summary.txt

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