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Merging changes on MAIN between checkpoint43 and checkpoint43a-release1mods
Command: cvs -q update -jcheckpoint43 -jcheckpoint43a-release1mods -d -P
These changes are most of the changes between c43 and c44 except those
that occured after "12:45 11 Jan 2002". As far as I can tell it is
checkpoint43 with the following mods:
o fix bug in mom_vi_del2uv
o select when filters are applied ; add options to zonal_filter (data.zonfilt) o gmredi: fix Pb in the adiabatic form ; add options (.e.g. Bolus advection)
o update AIM experiments (NCEP input files)
o improve and extend diagnostics (Monitor, TimeAve with NonLin-FrSurf)
o added some stuff for AD
o Jamar wet-points
This update does not contain the following mods that are in checkpoint44
o bug fix in pkg/generic_advdiff/
- thread related bug, bi,bj arguments in vertical advection routines
o some changes to pkg/autodiff, pkg/cost, pkg/exf, pkg/ecco,
verification/carbon and model/src/ related to adjoint
o some new Matlab scripts for diagnosing model density
- utils/matlab/dens_poly3.m and ini_poly3.m
The list of exclusions is accurate based on a "cvs diff". The list of
inclusions is based on the record in doc/tag-index which may not be complete.
| 1 | function [vals] = grepread(file,varargin) |
| 2 | % VALS = GREPREAD(FILE,EXPR1,...); |
| 3 | % |
| 4 | % Extracts the expressions "expr1","expr2",... from the file "file". |
| 5 | % This assumes output in the standard form defined by the MITgcm |
| 6 | % monitor package and is not a replacement for TEXTREAD. |
| 7 | % |
| 8 | % e.g. |
| 9 | % >> vals=grepread('output.txt','time_secondsf','ke_mean','ke_max'); |
| 10 | % >> plot(vals(:,1)/86400,vals(:,2:3)); |
| 11 | |
| 12 | if nargin<2 |
| 13 | error('You must supply a filename and at least one search expression!') |
| 14 | end |
| 15 | |
| 16 | tfile=sprintf('/tmp/grepexpr%15.15f',rand); |
| 17 | for k=1:nargin-1; |
| 18 | try |
| 19 | eval(['!grep ' varargin{k} ' ' file ' | sed s/.\*=// | sed s/NAN/1.23456789/ >! ' tfile]) |
| 20 | vals(:,k)=textread(tfile,'%f'); |
| 21 | delete(tfile) |
| 22 | catch |
| 23 | delete(tfile) |
| 24 | error(sprintf('An error occured while scanning for: %s',varargin{k})); |
| 25 | end |
| 26 | end |
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