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<!doctype html public "-//w3c//dtd html 4.0 transitional//en"> |
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<html> |
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<head> |
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<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1"> |
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<meta name="GENERATOR" content="Mozilla/4.77 [en] (X11; U; Linux 2.2.19-7.0.10 i686) [Netscape]"> |
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<title>manual</title> |
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</head> |
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<body bgcolor="#FFFFFF"> |
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<font size=+1>Documentation of MITgcm takes several forms:</font> |
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<ul> |
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<li> |
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<font size=+1>a <a href="manual/node3.html">manual</a></font></li> |
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|
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<li> |
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<font size=+1>a hyper-linked <a href="../code_reference/index.html" target="mainFrame">browsable |
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code</a></font></li> |
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|
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<li> |
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<font size=+1>in-source documentation (<a href="#prologues">subroutine |
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descriptions</a>)</font></li> |
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</ul> |
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|
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<center> |
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<h2> |
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The Manual</h2></center> |
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The manual, documenting the formulation, descretization and implementation, |
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can be accessed by following the links on the left. These take you to the |
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main sections of the document: |
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<ol> |
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<li> |
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<b><font size=+1><a href="manual/overview.html">Overview of MITgcm</a></font></b></li> |
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|
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<br>Discusses the |
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<a href="manual/continuous.html">continuous formulation |
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</a>of |
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the model and illustrates some |
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<a href="manual/illustrations.html">applications</a> |
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<li> |
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<b><font size=+1><a href="manual/discrete.html">Discretization and Algorithm</a></font></b></li> |
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|
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<br>Describes the spatial and temporal discretization of the model equations |
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<li> |
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<b><font size=+1><a href="manual/getting.html">Getting started and using |
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the MITgcm</a></font></b></li> |
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|
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<br>Describes how to <a href="manual/obtaining.html">download</a>, |
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<a href="manual/compiling.html">compile</a>, |
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<a href="manual/running.html">run</a> |
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and <a href="manual/doing.html">modify</a> the model. |
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<li> |
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<b><font size=+1><a href="manual/sarch.html">Software Architecture</a></font></b></li> |
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|
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<br>Describes the software <a href="manual/wrapper.html">infrastructure</a> |
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for |
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<a href="manual/using_wrapper.html">running on parallel systems</a>. |
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<li> |
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<b><font size=+1><a href="manual/autodiff.html">Automatic Differentiation</a></font></b></li> |
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|
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<br>Describes how to generate the adjoint and tangent linear forms of the |
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model. |
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<li> |
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<b><font size=+1><a href="manual/packages.html">Physical Parameterizations |
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and Packages</a></font></b></li> |
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|
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<br>Describes the optional parameterizations and features available in |
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the model. |
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<li> |
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<b><font size=+1><a href="manual/diags.html">Diagnostics and other tools</a></font></b></li> |
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|
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<br>Details of off-line tools used in conjuction with the model. |
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<li> |
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<b><font size=+1><a href="manual/ecco.html">Interface with ECCO</a></font></b></li> |
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|
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<br>Describes the interface of MITgcm in the <a href="http://www.ecco-group.org" target="idontexist">ECCO</a> |
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suite of optimization software tailored to large-scale ocean state-estimation</ol> |
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Jump to the full <a href="manual/contents.html">table of contents</a>. |
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<p>The manual is also downloadable in <a href="manual.ps.gz">PostScript</a> |
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and |
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<a href="manual.pdf">PDF</a>. |
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<br> |
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<center> |
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<h2> |
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<font size=+1>The hyper-linked <a href="../code_reference/index.html" target="mainFrame">browsable |
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code</a></font></h2></center> |
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This allows you to peruse the source code by following hyper-links for |
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variables, subroutines and functions. It allows you to find instances of |
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variables, find where subroutines and functions are called from and inspect |
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full model code. |
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<center> |
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<h2> |
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<a NAME="prologues"></a>In-source documentation</h2></center> |
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Comments in the source code itself have been formatted to render subroutine |
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descriptions (written as prologues at the top of each routine). It is downloadable |
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as: |
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<ul> |
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<li> |
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<a href="prologues.ps.gz">PostScript</a></li> |
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|
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<li> |
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<a href="prologues.pdf">PDF</a></li> |
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</ul> |
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|
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</body> |
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</html> |
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