| 1 |
<HTML> |
<!doctype html public "-//w3c//dtd html 4.0 transitional//en"> |
| 2 |
<HEAD></HEAD> |
<html> |
| 3 |
<BODY bgcolor="#FFFFFFFF"> |
<head> |
| 4 |
<h1>Browse Hypertext Code Online</h1> |
<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1"> |
| 5 |
Browse MITgcm source code in hyperlinked form. |
<meta name="GENERATOR" content="Mozilla/4.74 [en]C-CCK-MCD (Win98; U) [Netscape]"> |
| 6 |
<br> |
<title>callTree</title> |
| 7 |
Select links from the calling tree below or select from the side bar menu to access |
</head> |
| 8 |
alphabetic lists of model subroutines and functions, runtime parameters, compile time parameters |
<body bgcolor="#FFFFFF"> |
| 9 |
and model source files. |
|
| 10 |
<br>The botton link at the side (all symbols) displays lists of all symbols |
<h1> |
| 11 |
used in MITgcm. This list is quite long and can take some time to display. |
Browse Hypertext Code Online</h1> |
| 12 |
|
Browse MITgcm source code in hyperlinked form. |
| 13 |
<h3>MITgcm Release 1 Main Call Tree</h3> |
<p>Select links from the calling tree below or select from the side bar |
| 14 |
<PRE> |
menu to access alphabetic lists of model subroutines and functions, runtime |
| 15 |
|
parameters, compile time parameters and model source files. |
| 16 |
Invocation from WRAPPER level... |
<p>The 'all symbols' link at the bottom on the side displays lists of all |
| 17 |
: |
symbols used in MITgcm. This list is quite long and can take some time |
| 18 |
: |
to display. |
| 19 |
| |
<h3> |
| 20 |
|-<A HREF=vdb/names/6P.htm>THE_MODEL_MAIN</A> :: Primary driver for the MITgcm algorithm |
MITgcm Release 1 Main Call Tree</h3> |
| 21 |
| :: Called from WRAPPER level numerical |
|
| 22 |
| :: code innvocation routine. On entry |
<pre> |
| 23 |
| :: to THE_MODEL_MAIN separate thread and |
Invocation from WRAPPER level... |
| 24 |
| :: separate processes will have been established. |
: |
| 25 |
| :: Each thread and process will have a unique ID |
: |
| 26 |
| :: but as yet it will not be associated with a |
| |
| 27 |
| :: specific region in decomposed discrete space. |
|-<a href="vdb/names/6P.htm">THE_MODEL_MAIN</a> :: Primary driver for the MITgcm algorithm |
| 28 |
| |
| :: Called from WRAPPER level numerical |
| 29 |
|-<A HREF=vdb/names/3F.htm>INITIALISE_FIXED</A> :: Set fixed model arrays such as topography, |
| :: code innvocation routine. On entry |
| 30 |
| | :: grid, solver matrices etc.. |
| :: to THE_MODEL_MAIN separate thread and |
| 31 |
| | |
| :: separate processes will have been established. |
| 32 |
| |-<A HREF=vdb/names/3V.htm>INI_PARMS</A> :: Routine to set kernel model parameters. |
| :: Each thread and process will have a unique ID |
| 33 |
| | :: By default kernel parameters are read from file |
| :: but as yet it will not be associated with a |
| 34 |
| | :: "data" in directory in which code executes. |
| :: specific region in decomposed discrete space. |
| 35 |
| | |
| |
| 36 |
| |-<A HREF=vdb/names/5D.htm>MON_INIT</A> :: Initialises monitor pacakge ( see pkg/monitor ) |
|-<a href="vdb/names/3F.htm">INITIALISE_FIXED</a> :: Set fixed model arrays such as topography, |
| 37 |
| | |
| | :: grid, solver matrices etc.. |
| 38 |
| |-<A HREF=vdb/names/3Q.htm>INI_GRID</A> :: Control grid array (vert. and hori.) initialisation. |
| | |
| 39 |
| | | :: Grid arrays are held and described in GRID.h. |
| |-<a href="vdb/names/3V.htm">INI_PARMS</a> :: Routine to set kernel model parameters. |
| 40 |
| | | |
| | :: By default kernel parameters are read from file |
| 41 |
| | |-<A HREF=vdb/names/42.htm>INI_VERTICAL_GRID</A> :: Initialise vertical grid arrays. |
| | :: "data" in directory in which code executes. |
| 42 |
| | | |
| | |
| 43 |
| | |-<A HREF=vdb/names/3H.htm>INI_CARTESIAN_GRID</A> :: Cartesian horiz. grid initialisation |
| |-<a href="vdb/names/5D.htm">MON_INIT</a> :: Initialises monitor pacakge ( see pkg/monitor ) |
| 44 |
| | | :: (calculate grid from kernel parameters). |
| | |
| 45 |
| | | |
| |-<a href="vdb/names/3Q.htm">INI_GRID</a> :: Control grid array (vert. and hori.) initialisation. |
| 46 |
| | |-<A HREF=vdb/names/3Y.htm>INI_SPHERICAL_POLAR_GRID</A> :: Spherical polar horiz. grid |
| | | :: Grid arrays are held and described in GRID.h. |
| 47 |
| | | :: initialisation (calculate grid from |
| | | |
| 48 |
| | | :: kernel parameters). |
| | |-<a href="vdb/names/42.htm">INI_VERTICAL_GRID</a> :: Initialise vertical grid arrays. |
| 49 |
| | | |
| | | |
| 50 |
| | |-<A HREF=vdb/names/3L.htm>INI_CURVILINEAR_GRID</A> :: General orthogonal, structured horiz. |
| | |-<a href="vdb/names/3H.htm">INI_CARTESIAN_GRID</a> :: Cartesian horiz. grid initialisation |
| 51 |
| | :: grid initialisations. ( input from raw |
| | | :: (calculate grid from kernel parameters). |
| 52 |
| | :: grid files, LONC.bin, DXF.bin etc... ) |
| | | |
| 53 |
| | |
| | |-<a href="vdb/names/3Y.htm">INI_SPHERICAL_POLAR_GRID</a> :: Spherical polar horiz. grid |
| 54 |
| |-<A HREF=vdb/names/3M.htm>INI_DEPTHS</A> :: Read (from "bathyFile") or set bathymetry/orgography. |
| | | :: initialisation (calculate grid from |
| 55 |
| | |
| | | :: kernel parameters). |
| 56 |
| |-<A HREF=vdb/names/3T.htm>INI_MASKS_ETC</A> :: Derive horizontal and vertical cell fractions and |
| | | |
| 57 |
| | :: land masking for solid-fluid boundaries. |
| | |-<a href="vdb/names/3L.htm">INI_CURVILINEAR_GRID</a> :: General orthogonal, structured horiz. |
| 58 |
| | |
| | :: grid initialisations. ( input from raw |
| 59 |
| |-<A HREF=vdb/names/3R.htm>INI_LINEAR_PHISURF</A> :: Set ref. surface Bo_surf |
| | :: grid files, LONC.bin, DXF.bin etc... ) |
| 60 |
| | |
| | |
| 61 |
| |-<A HREF=vdb/names/3K.htm>INI_CORI</A> :: Set coriolis term. zero, f-plane, beta-plane, |
| |-<a href="vdb/names/3M.htm">INI_DEPTHS</a> :: Read (from "bathyFile") or set bathymetry/orgography. |
| 62 |
| | :: sphere optins are coded. |
| | |
| 63 |
| | |
| |-<a href="vdb/names/3T.htm">INI_MASKS_ETC</a> :: Derive horizontal and vertical cell fractions and |
| 64 |
| |-<A HREF=vdb/names/1OL.htm>PACKAGES_BOOT</A> :: Start up the optional package environment. |
| | :: land masking for solid-fluid boundaries. |
| 65 |
| | :: Runtime selection of active packages. |
| | |
| 66 |
| | |
| |-<a href="vdb/names/3R.htm">INI_LINEAR_PHISURF</a> :: Set ref. surface Bo_surf |
| 67 |
| |-<A HREF=vdb/names/5Y.htm>PACKAGES_READPARMS</A> :: Call active package internal parameter load. |
| | |
| 68 |
| | | |
| |-<a href="vdb/names/3K.htm">INI_CORI</a> :: Set coriolis term. zero, f-plane, beta-plane, |
| 69 |
| | |-<A HREF=vdb/names/2T.htm>GMREDI_READPARMS</A> :: GM Package. see pkg/gmredi |
| | :: sphere optins are coded. |
| 70 |
| | |-<A HREF=vdb/names/4S.htm>KPP_READPARMS</A> :: KPP Package. see pkg/kpp |
| | |
| 71 |
| | |-<A HREF=vdb/names/6F.htm>SHAP_FILT_READPARMS</A> :: Shapiro filter package. see pkg/shap_filt |
| |-<a href="vdb/names/1OL.htm">PACKAGES_BOOT</a> :: Start up the optional package environment. |
| 72 |
| | |-<A HREF=vdb/names/5Q.htm>OBCS_READPARMS</A> :: Open bndy package. see pkg/obcs |
| | :: Runtime selection of active packages. |
| 73 |
| | |-<A HREF=vdb/names/1B.htm>COST_READPARMS</A> :: Cost function package. see pkg/cost |
| | |
| 74 |
| | |-<A HREF=vdb/names/1E.htm>CTRL_INIT</A> :: Control vector support package. see pkg/ctrl |
| |-<a href="vdb/names/5Y.htm">PACKAGES_READPARMS</a> :: Call active package internal parameter load. |
| 75 |
| | |-<A HREF=vdb/names/5V.htm>OPTIM_READPARMS</A> :: Optimisation support package. see pkg/ctrl |
| | | |
| 76 |
| | |-<A HREF=vdb/names/2W.htm>GRDCHK_READPARMS</A> :: Gradient check package. see pkg/grdchk |
| | |-<a href="vdb/names/2T.htm">GMREDI_READPARMS</a> :: GM Package. see pkg/gmredi |
| 77 |
| | |-<A HREF=vdb/names/1U.htm>ECCO_READPARMS</A> :: ECCO Support Package. see pkg/ecco |
| | |-<a href="vdb/names/4S.htm">KPP_READPARMS</a> :: KPP Package. see pkg/kpp |
| 78 |
| | |
| | |-<a href="vdb/names/6F.htm">SHAP_FILT_READPARMS</a> :: Shapiro filter package. see pkg/shap_filt |
| 79 |
| |-<A HREF=vdb/names/1OM.htm>PACKAGES_CHECK</A> :: Control checking package configuration. |
| | |-<a href="vdb/names/5Q.htm">OBCS_READPARMS</a> :: Open bndy package. see pkg/obcs |
| 80 |
| | | |
| | |-<a href="vdb/names/1B.htm">COST_READPARMS</a> :: Cost function package. see pkg/cost |
| 81 |
| | |-<A HREF=vdb/names/4P.htm>KPP_CHECK</A> :: KPP Package. pkg/kpp |
| | |-<a href="vdb/names/1E.htm">CTRL_INIT</a> :: Control vector support package. see pkg/ctrl |
| 82 |
| | |-<A HREF=vdb/names/5N.htm>OBCS_CHECK</A> :: Open bndy Pacakge. pkg/obcs |
| | |-<a href="vdb/names/5V.htm">OPTIM_READPARMS</a> :: Optimisation support package. see pkg/ctrl |
| 83 |
| | |-<A HREF=vdb/names/2Q.htm>GMREDI_CHECK</A> :: GM Package. pkg/gmredi |
| | |-<a href="vdb/names/2W.htm">GRDCHK_READPARMS</a> :: Gradient check package. see pkg/grdchk |
| 84 |
| | |
| | |-<a href="vdb/names/1U.htm">ECCO_READPARMS</a> :: ECCO Support Package. see pkg/ecco |
| 85 |
| |-<A HREF=vdb/names/1ON.htm>PACKAGES_INIT_FIXED</A> :: Fixed initialisation of packages |
| | |
| 86 |
| | |-<A HREF=vdb/names/5O.htm>OBCS_INIT_FIXED</A> :: Open bndy Package. see pkg/obcs |
| |-<a href="vdb/names/1OM.htm">PACKAGES_CHECK</a> :: Control checking package configuration. |
| 87 |
| | |-<A HREF=vdb/names/2C.htm>FLT_INIT</A> :: Floats Package. see pkg/flt |
| | | |
| 88 |
| | |
| | |-<a href="vdb/names/4P.htm">KPP_CHECK</a> :: KPP Package. pkg/kpp |
| 89 |
| |-<A HREF=vdb/names/7O.htm>ZONAL_FILT_INIT</A> :: FFT filter Package. see pkg/zonal_filt |
| | |-<a href="vdb/names/5N.htm">OBCS_CHECK</a> :: Open bndy Pacakge. pkg/obcs |
| 90 |
| | |
| | |-<a href="vdb/names/2Q.htm">GMREDI_CHECK</a> :: GM Package. pkg/gmredi |
| 91 |
| |-<A HREF=vdb/names/3I.htm>INI_CG2D</A> :: 2d con. grad solver initialisation. |
| | |
| 92 |
| | |
| |-<a href="vdb/names/1ON.htm">PACKAGES_INIT_FIXED</a> :: Fixed initialisation of packages |
| 93 |
| |-<A HREF=vdb/names/3J.htm>INI_CG3D</A> :: 3d con. grad solver initialisation. |
| | |-<a href="vdb/names/5O.htm">OBCS_INIT_FIXED</a> :: Open bndy Package. see pkg/obcs |
| 94 |
| | |
| | |-<a href="vdb/names/2C.htm">FLT_INIT</a> :: Floats Package. see pkg/flt |
| 95 |
| |-<A HREF=vdb/names/14.htm>CONFIG_SUMMARY</A> :: Provide synopsis of kernel setup. |
| | |
| 96 |
| :: Includes annotated table of kernel |
| |-<a href="vdb/names/7O.htm">ZONAL_FILT_INIT</a> :: FFT filter Package. see pkg/zonal_filt |
| 97 |
| :: parameter settings. |
| | |
| 98 |
| |
| |-<a href="vdb/names/3I.htm">INI_CG2D</a> :: 2d con. grad solver initialisation. |
| 99 |
|-<A HREF=vdb/names/1I.htm>CTRL_UNPACK</A> :: Control vector support package. see pkg/ctrl |
| | |
| 100 |
| |
| |-<a href="vdb/names/3J.htm">INI_CG3D</a> :: 3d con. grad solver initialisation. |
| 101 |
|-<A HREF=vdb/names/3.htm>ADTHE_MAIN_LOOP</A> :: Derivative evaluating form of main time stepping loop |
| | |
| 102 |
! :: Auotmatically gerenrated by TAMC/TAF. |
| |-<a href="vdb/names/14.htm">CONFIG_SUMMARY</a> :: Provide synopsis of kernel setup. |
| 103 |
| |
| :: Includes annotated table of kernel |
| 104 |
|-<A HREF=vdb/names/1H.htm>CTRL_PACK</A> :: Control vector support package. see pkg/ctrl |
| :: parameter settings. |
| 105 |
| |
| |
| 106 |
|-<A HREF=vdb/names/2V.htm>GRDCHK_MAIN</A> :: Gradient check package. see pkg/grdchk |
|-<a href="vdb/names/1I.htm">CTRL_UNPACK</a> :: Control vector support package. see pkg/ctrl |
| 107 |
| |
| |
| 108 |
|-<A HREF=vdb/names/6O.htm>THE_MAIN_LOOP</A> :: Main timestepping loop routine. |
|-<a href="vdb/names/3.htm">ADTHE_MAIN_LOOP</a> :: Derivative evaluating form of main time stepping loop |
| 109 |
| | |
! :: Auotmatically gerenrated by TAMC/TAF. |
| 110 |
| |-<A HREF=vdb/names/3G.htm>INITIALISE_VARIA</A> :: Set the initial conditions for time evolving |
| |
| 111 |
| | | :: variables |
|-<a href="vdb/names/1H.htm">CTRL_PACK</a> :: Control vector support package. see pkg/ctrl |
| 112 |
| | | |
| |
| 113 |
| | |-<A HREF=vdb/names/3R.htm>INI_LINEAR_PHISURF</A> :: Set ref. surface Bo_surf |
|-<a href="vdb/names/2V.htm">GRDCHK_MAIN</a> :: Gradient check package. see pkg/grdchk |
| 114 |
| | | |
| |
| 115 |
| | |-<A HREF=vdb/names/3K.htm>INI_CORI</A> :: Set coriolis term. zero, f-plane, beta-plane, |
|-<a href="vdb/names/6O.htm">THE_MAIN_LOOP</a> :: Main timestepping loop routine. |
| 116 |
| | | :: sphere optins are coded. |
| | |
| 117 |
| | | |
| |-<a href="vdb/names/3G.htm">INITIALISE_VARIA</a> :: Set the initial conditions for time evolving |
| 118 |
| | |-<A HREF=vdb/names/3I.htm>INI_CG2D</A> :: 2d con. grad solver initialisation. |
| | | :: variables |
| 119 |
| | |-<A HREF=vdb/names/3J.htm>INI_CG3D</A> :: 3d con. grad solver initialisation. |
| | | |
| 120 |
| | |-<A HREF=vdb/names/3U.htm>INI_MIXING</A> :: Initialise diapycnal diffusivity. |
| | |-<a href="vdb/names/3R.htm">INI_LINEAR_PHISURF</a> :: Set ref. surface Bo_surf |
| 121 |
| | |-<A HREF=vdb/names/3N.htm>INI_DYNVARS</A> :: Initialise to zero all DYNVARS.h arrays (dynamical |
| | | |
| 122 |
| | | :: fields). |
| | |-<a href="vdb/names/3K.htm">INI_CORI</a> :: Set coriolis term. zero, f-plane, beta-plane, |
| 123 |
| | | |
| | | :: sphere optins are coded. |
| 124 |
| | |-<A HREF=vdb/names/3O.htm>INI_FIELDS</A> :: Control initialising model fields to non-zero |
| | | |
| 125 |
| | | |-<A HREF=vdb/names/41.htm>INI_VEL</A> :: Initialize 3D flow field. |
| | |-<a href="vdb/names/3I.htm">INI_CG2D</a> :: 2d con. grad solver initialisation. |
| 126 |
| | | |-<A HREF=vdb/names/3Z.htm>INI_THETA</A> :: Set model initial temperature field. |
| | |-<a href="vdb/names/3J.htm">INI_CG3D</a> :: 3d con. grad solver initialisation. |
| 127 |
| | | |-<A HREF=vdb/names/3X.htm>INI_SALT</A> :: Set model initial salinity field. |
| | |-<a href="vdb/names/3U.htm">INI_MIXING</a> :: Initialise diapycnal diffusivity. |
| 128 |
| | | |-<A HREF=vdb/names/3W.htm>INI_PSURF</A> :: Set model initial free-surface height/pressure. |
| | |-<a href="vdb/names/3N.htm">INI_DYNVARS</a> :: Initialise to zero all DYNVARS.h arrays (dynamical |
| 129 |
| | | |
| | | :: fields). |
| 130 |
| | |-<A HREF=vdb/names/40.htm>INI_TR1</A> :: Set initial tracer 1 distribution. |
| | | |
| 131 |
| | | |
| | |-<a href="vdb/names/3O.htm">INI_FIELDS</a> :: Control initialising model fields to non-zero |
| 132 |
| | |-<A HREF=vdb/names/6M.htm>THE_CORRECTION_STEP</A> :: Step forward to next time step. |
| | | |-<a href="vdb/names/41.htm">INI_VEL</a> :: Initialize 3D flow field. |
| 133 |
| | | | :: Here applied to move restart conditions |
| | | |-<a href="vdb/names/3Z.htm">INI_THETA</a> :: Set model initial temperature field. |
| 134 |
| | | | :: (saved in mid timestep) to correct level in |
| | | |-<a href="vdb/names/3X.htm">INI_SALT</a> :: Set model initial salinity field. |
| 135 |
| | | | :: time (only used for pre-c35). |
| | | |-<a href="vdb/names/3W.htm">INI_PSURF</a> :: Set model initial free-surface height/pressure. |
| 136 |
| | | | |
| | | |
| 137 |
| | | |-<A HREF=vdb/names/Q.htm>CALC_GRAD_PHI_SURF</A> :: Return DDx and DDy of surface pressure |
| | |-<a href="vdb/names/40.htm">INI_TR1</a> :: Set initial tracer 1 distribution. |
| 138 |
| | | |-<A HREF=vdb/names/18.htm>CORRECTION_STEP</A> :: Pressure correction to momentum |
| | | |
| 139 |
| | | |-<A HREF=vdb/names/1J.htm>CYCLE_TRACER</A> :: Move tracers forward in time. |
| | |-<a href="vdb/names/6M.htm">THE_CORRECTION_STEP</a> :: Step forward to next time step. |
| 140 |
| | | |-<A HREF=vdb/names/5K.htm>OBCS_APPLY_UV</A> :: Open bndy package. see pkg/obcs |
| | | | :: Here applied to move restart conditions |
| 141 |
| | | |-<A HREF=vdb/names/6E.htm>SHAP_FILT_APPLY</A> :: Shapiro filter package. see pkg/shap_filt |
| | | | :: (saved in mid timestep) to correct level in |
| 142 |
| | | |-<A HREF=vdb/names/7N.htm>ZONAL_FILT_APPLY</A> :: FFT filter package. see pkg/zonal_filt |
| | | | :: time (only used for pre-c35). |
| 143 |
| | | |-<A HREF=vdb/names/16.htm>CONVECTIVE_ADJUSTMENT</A> :: Control static instability mixing. |
| | | | |
| 144 |
| | | | |-<A HREF=vdb/names/2A.htm>FIND_RHO</A> :: Find adjacent densities. |
| | | |-<a href="vdb/names/Q.htm">CALC_GRAD_PHI_SURF</a> :: Return DDx and DDy of surface pressure |
| 145 |
| | | | |-<A HREF=vdb/names/15.htm>CONVECT</A> :: Mix static instability. |
| | | |-<a href="vdb/names/18.htm">CORRECTION_STEP</a> :: Pressure correction to momentum |
| 146 |
| | | | |-<A HREF=vdb/names/6R.htm>TIMEAVE_CUMULATE</A> :: Update convection statistics. |
| | | |-<a href="vdb/names/1J.htm">CYCLE_TRACER</a> :: Move tracers forward in time. |
| 147 |
| | | | |
| | | |-<a href="vdb/names/5K.htm">OBCS_APPLY_UV</a> :: Open bndy package. see pkg/obcs |
| 148 |
| | | |-<A HREF=vdb/names/O.htm>CALC_EXACT_ETA</A> :: Change SSH to flow divergence. |
| | | |-<a href="vdb/names/6E.htm">SHAP_FILT_APPLY</a> :: Shapiro filter package. see pkg/shap_filt |
| 149 |
| | | |
| | | |-<a href="vdb/names/7N.htm">ZONAL_FILT_APPLY</a> :: FFT filter package. see pkg/zonal_filt |
| 150 |
| | |-<A HREF=vdb/names/17.htm>CONVECTIVE_ADJUSTMENT_INI</A> :: Control static instability mixing |
| | | |-<a href="vdb/names/16.htm">CONVECTIVE_ADJUSTMENT</a> :: Control static instability mixing. |
| 151 |
| | | | :: Extra time history interactions. |
| | | | |-<a href="vdb/names/2A.htm">FIND_RHO</a> :: Find adjacent densities. |
| 152 |
| | | | |
| | | | |-<a href="vdb/names/15.htm">CONVECT</a> :: Mix static instability. |
| 153 |
| | | |-<A HREF=vdb/names/2A.htm>FIND_RHO</A> :: Find adjacent densities. |
| | | | |-<a href="vdb/names/6R.htm">TIMEAVE_CUMULATE</a> :: Update convection statistics. |
| 154 |
| | | |-<A HREF=vdb/names/15.htm>CONVECT</A> :: Mix static instability. |
| | | | |
| 155 |
| | | |-<A HREF=vdb/names/6R.htm>TIMEAVE_CUMULATE</A> :: Update convection statistics. |
| | | |-<a href="vdb/names/O.htm">CALC_EXACT_ETA</a> :: Change SSH to flow divergence. |
| 156 |
| | | |
| | | |
| 157 |
| | |-<A HREF=vdb/names/5X.htm>PACKAGES_INIT_VARIABLES</A> :: Does initialisation of time evolving |
| | |-<a href="vdb/names/17.htm">CONVECTIVE_ADJUSTMENT_INI</a> :: Control static instability mixing |
| 158 |
| | | | :: package data. |
| | | | :: Extra time history interactions. |
| 159 |
| | | | |
| | | | |
| 160 |
| | | |-<A HREF=vdb/names/2S.htm>GMREDI_INIT</A> :: GM package. ( see pkg/gmredi ) |
| | | |-<a href="vdb/names/2A.htm">FIND_RHO</a> :: Find adjacent densities. |
| 161 |
| | | |-<A HREF=vdb/names/4R.htm>KPP_INIT</A> :: KPP package. ( see pkg/kpp ) |
| | | |-<a href="vdb/names/15.htm">CONVECT</a> :: Mix static instability. |
| 162 |
| | | |-<A HREF=vdb/names/1P1.htm>KPP_OPEN_DIAGS</A> :: Open diagnostic output files. |
| | | |-<a href="vdb/names/6R.htm">TIMEAVE_CUMULATE</a> :: Update convection statistics. |
| 163 |
| | | |-<A HREF=vdb/names/5P.htm>OBCS_INIT_VARIABLES</A> :: Open bndy. package. ( see pkg/obcs ) |
| | | |
| 164 |
| | | |-<A HREF=vdb/names/6.htm>AIM_INIT</A> :: Interm. atmos package. ( see pkg/aim ) |
| | |-<a href="vdb/names/5X.htm">PACKAGES_INIT_VARIABLES</a> :: Does initialisation of time evolving |
| 165 |
| | | |-<A HREF=vdb/names/1G.htm>CTRL_MAP_INI</A> :: Control vector package.( see pkg/ctrl ) |
| | | | :: package data. |
| 166 |
| | | |-<A HREF=vdb/names/1A.htm>COST_INIT</A> :: Cost function package. ( see pkg/cost ) |
| | | | |
| 167 |
| | | |-<A HREF=vdb/names/1T.htm>ECCO_INIT</A> :: ECCO support package. ( see pkg/ecco ) |
| | | |-<a href="vdb/names/2S.htm">GMREDI_INIT</a> :: GM package. ( see pkg/gmredi ) |
| 168 |
| | | |-<A HREF=vdb/names/3P.htm>INI_FORCING</A> :: Set model initial forcing fields. |
| | | |-<a href="vdb/names/4R.htm">KPP_INIT</a> :: KPP package. ( see pkg/kpp ) |
| 169 |
| | | | :: Either set in-line or from file as shown. |
| | | |-<a href="vdb/names/1P1.htm">KPP_OPEN_DIAGS</a> :: Open diagnostic output files. |
| 170 |
| | | |-<A HREF=vdb/names/1LC.htm>READ_FLD_XY_RS</A>(zonalWindFile) :: Load forcing file |
| | | |-<a href="vdb/names/5P.htm">OBCS_INIT_VARIABLES</a> :: Open bndy. package. ( see pkg/obcs ) |
| 171 |
| | | |-<A HREF=vdb/names/1LC.htm>READ_FLD_XY_RS</A>(meridWindFile) :: Load forcing file |
| | | |-<a href="vdb/names/6.htm">AIM_INIT</a> :: Interm. atmos package. ( see pkg/aim ) |
| 172 |
| | | |-<A HREF=vdb/names/1LC.htm>READ_FLD_XY_RS</A>(surfQFile) :: Load forcing file |
| | | |-<a href="vdb/names/1G.htm">CTRL_MAP_INI</a> :: Control vector package.( see pkg/ctrl ) |
| 173 |
| | | |-<A HREF=vdb/names/1LC.htm>READ_FLD_XY_RS</A>(EmPmRfile) :: Load forcing file |
| | | |-<a href="vdb/names/1A.htm">COST_INIT</a> :: Cost function package. ( see pkg/cost ) |
| 174 |
| | | |-<A HREF=vdb/names/1LC.htm>READ_FLD_XY_RS</A>(thetaClimFile) :: Load forcing file |
| | | |-<a href="vdb/names/1T.htm">ECCO_INIT</a> :: ECCO support package. ( see pkg/ecco ) |
| 175 |
| | | |-<A HREF=vdb/names/1LC.htm>READ_FLD_XY_RS</A>(saltClimFile) :: Load forcing file |
| | | |-<a href="vdb/names/3P.htm">INI_FORCING</a> :: Set model initial forcing fields. |
| 176 |
| | | |-<A HREF=vdb/names/1LC.htm>READ_FLD_XY_RS</A>(surfQswFile) :: Load forcing file |
| | | | :: Either set in-line or from file as shown. |
| 177 |
| | | |
| | | |-<a href="vdb/names/1LC.htm">READ_FLD_XY_RS</a>(zonalWindFile) :: Load forcing file |
| 178 |
| | |-<A HREF=vdb/names/Y.htm>CALC_SURF_DR</A> :: Calculate the new surface level thickness. |
| | | |-<a href="vdb/names/1LC.htm">READ_FLD_XY_RS</a>(meridWindFile) :: Load forcing file |
| 179 |
| | |-<A HREF=vdb/names/73.htm>UPDATE_SURF_DR</A> :: Update the surface-level thickness fraction. |
| | | |-<a href="vdb/names/1LC.htm">READ_FLD_XY_RS</a>(surfQFile) :: Load forcing file |
| 180 |
| | |-<A HREF=vdb/names/72.htm>UPDATE_CG2D</A> :: Update 2d conjugate grad. for Free-Surf. |
| | | |-<a href="vdb/names/1LC.htm">READ_FLD_XY_RS</a>(EmPmRfile) :: Load forcing file |
| 181 |
| | |-<A HREF=vdb/names/6J.htm>STATE_SUMMARY</A> :: Summarize model prognostic variables. |
| | | |-<a href="vdb/names/1LC.htm">READ_FLD_XY_RS</a>(thetaClimFile) :: Load forcing file |
| 182 |
| | |-<A HREF=vdb/names/6T.htm>TIMEAVE_STATVARS</A> :: Time averaging package ( see pkg/timeave ). |
| | | |-<a href="vdb/names/1LC.htm">READ_FLD_XY_RS</a>(saltClimFile) :: Load forcing file |
| 183 |
| | |
| | | |-<a href="vdb/names/1LC.htm">READ_FLD_XY_RS</a>(surfQswFile) :: Load forcing file |
| 184 |
| |-<A HREF=vdb/names/7K.htm>WRITE_STATE</A> :: Controlling routine for IO to dump model state. |
| | | |
| 185 |
| | |-<A HREF=vdb/names/7J.htm>WRITE_REC_XYZ_RL</A> :: Single file I/O |
| | |-<a href="vdb/names/Y.htm">CALC_SURF_DR</a> :: Calculate the new surface level thickness. |
| 186 |
| | |-<A HREF=vdb/names/7I.htm>WRITE_FLD_XYZ_RL</A> :: Multi-file I/O |
| | |-<a href="vdb/names/73.htm">UPDATE_SURF_DR</a> :: Update the surface-level thickness fraction. |
| 187 |
| | |
| | |-<a href="vdb/names/72.htm">UPDATE_CG2D</a> :: Update 2d conjugate grad. for Free-Surf. |
| 188 |
| |-<A HREF=vdb/names/5B.htm>MONITOR</A> :: Monitor state ( see pkg/monitor ) |
| | |-<a href="vdb/names/6J.htm">STATE_SUMMARY</a> :: Summarize model prognostic variables. |
| 189 |
| |-<A HREF=vdb/names/1F.htm>CTRL_MAP_FORCING</A> :: Control vector support package. ( see pkg/ctrl ) |
| | |-<a href="vdb/names/6T.htm">TIMEAVE_STATVARS</a> :: Time averaging package ( see pkg/timeave ). |
| 190 |
====|>| |
| | |
| 191 |
====|>| **************************** |
| |-<a href="vdb/names/7K.htm">WRITE_STATE</a> :: Controlling routine for IO to dump model state. |
| 192 |
====|>| BEGIN MAIN TIMESTEPPING LOOP |
| | |-<a href="vdb/names/7J.htm">WRITE_REC_XYZ_RL</a> :: Single file I/O |
| 193 |
====|>| **************************** |
| | |-<a href="vdb/names/7I.htm">WRITE_FLD_XYZ_RL</a> :: Multi-file I/O |
| 194 |
====|>| |
| | |
| 195 |
/\ | |-<A HREF=vdb/names/2E.htm>FORWARD_STEP</A> :: Step forward a time-step ( AT LAST !!! ) |
| |-<a href="vdb/names/5B.htm">MONITOR</a> :: Monitor state ( see pkg/monitor ) |
| 196 |
/\ | | | |
| |-<a href="vdb/names/1F.htm">CTRL_MAP_FORCING</a> :: Control vector support package. ( see pkg/ctrl ) |
| 197 |
/\ | | |-<A HREF=vdb/names/1R.htm>DUMMY_IN_STEPPING</A> :: autodiff package ( pkg/autoduff ). |
====|>| |
| 198 |
/\ | | |-<A HREF=vdb/names/O.htm>CALC_EXACT_ETA</A> :: Change SSH to flow divergence. |
====|>| **************************** |
| 199 |
/\ | | |-<A HREF=vdb/names/Y.htm>CALC_SURF_DR</A> :: Calculate the new surface level thickness. |
====|>| BEGIN MAIN TIMESTEPPING LOOP |
| 200 |
/\ | | |-<A HREF=vdb/names/23.htm>EXF_GETFORCING</A> :: External forcing package. ( pkg/exf ) |
====|>| **************************** |
| 201 |
/\ | | |-<A HREF=vdb/names/24.htm>EXTERNAL_FIELDS_LOAD</A> :: Control loading time dep. external data. |
====|>| |
| 202 |
/\ | | | | :: Simple interpolcation between end-points |
/\ | |-<a href="vdb/names/2E.htm">FORWARD_STEP</a> :: Step forward a time-step ( AT LAST !!! ) |
| 203 |
/\ | | | | :: for forcing datasets. |
/\ | | | |
| 204 |
/\ | | | | |
/\ | | |-<a href="vdb/names/1R.htm">DUMMY_IN_STEPPING</a> :: autodiff package ( pkg/autoduff ). |
| 205 |
/\ | | | |-<A HREF=vdb/names/.htm>EXCH_XY_RX</A> :: Sync forcing. in overlap regions. |
/\ | | |-<a href="vdb/names/O.htm">CALC_EXACT_ETA</a> :: Change SSH to flow divergence. |
| 206 |
/\ | | | |
/\ | | |-<a href="vdb/names/Y.htm">CALC_SURF_DR</a> :: Calculate the new surface level thickness. |
| 207 |
/\ | | |-<A HREF=vdb/names/6L.htm>THERMODYNAMICS</A> :: theta, salt + tracer equations driver. |
/\ | | |-<a href="vdb/names/23.htm">EXF_GETFORCING</a> :: External forcing package. ( pkg/exf ) |
| 208 |
/\ | | | | |
/\ | | |-<a href="vdb/names/24.htm">EXTERNAL_FIELDS_LOAD</a> :: Control loading time dep. external data. |
| 209 |
/\ | | | |-<A HREF=vdb/names/43.htm>INTEGRATE_FOR_W</A> :: Integrate for vertical velocity. |
/\ | | | | :: Simple interpolcation between end-points |
| 210 |
/\ | | | |-<A HREF=vdb/names/5L.htm>OBCS_APPLY_W</A> :: Open bndy. package ( see pkg/obcs ). |
/\ | | | | :: for forcing datasets. |
| 211 |
/\ | | | |-<A HREF=vdb/names/2A.htm>FIND_RHO</A> :: Calculates [rho(S,T,z)-Rhonil] of a slice |
/\ | | | | |
| 212 |
/\ | | | |-<A HREF=vdb/names/2U.htm>GRAD_SIGMA</A> :: Calculate isoneutral gradients |
/\ | | | |-<a href="vdb/names/.htm">EXCH_XY_RX</a> :: Sync forcing. in overlap regions. |
| 213 |
/\ | | | |-<A HREF=vdb/names/W.htm>CALC_IVDC</A> :: Set Implicit Vertical Diffusivity for Convection |
/\ | | | |
| 214 |
/\ | | | | |
/\ | | |-<a href="vdb/names/6L.htm">THERMODYNAMICS</a> :: theta, salt + tracer equations driver. |
| 215 |
/\ | | | |-<A HREF=vdb/names/5M.htm>OBCS_CALC</A> :: Open bndy. package ( see pkg/obcs ). |
/\ | | | | |
| 216 |
/\ | | | |-<A HREF=vdb/names/26.htm>EXTERNAL_FORCING_SURF</A> :: Accumulates appropriately dimensioned |
/\ | | | |-<a href="vdb/names/43.htm">INTEGRATE_FOR_W</a> :: Integrate for vertical velocity. |
| 217 |
/\ | | | | :: forcing terms. |
/\ | | | |-<a href="vdb/names/5L.htm">OBCS_APPLY_W</a> :: Open bndy. package ( see pkg/obcs ). |
| 218 |
/\ | | | | |
/\ | | | |-<a href="vdb/names/2A.htm">FIND_RHO</a> :: Calculates [rho(S,T,z)-Rhonil] of a slice |
| 219 |
/\ | | | |-<A HREF=vdb/names/2O.htm>GMREDI_CALC_TENSOR</A> :: GM package ( see pkg/gmredi ). |
/\ | | | |-<a href="vdb/names/2U.htm">GRAD_SIGMA</a> :: Calculate isoneutral gradients |
| 220 |
/\ | | | |-<A HREF=vdb/names/2P.htm>GMREDI_CALC_TENSOR_DUMMY</A> :: GM package ( see pkg/gmredi ). |
/\ | | | |-<a href="vdb/names/W.htm">CALC_IVDC</a> :: Set Implicit Vertical Diffusivity for Convection |
| 221 |
/\ | | | |-<A HREF=vdb/names/4L.htm>KPP_CALC</A> :: KPP package ( see pkg/kpp ). |
/\ | | | | |
| 222 |
/\ | | | |-<A HREF=vdb/names/4N.htm>KPP_CALC_DUMMY</A> :: KPP package ( see pkg/kpp ). |
/\ | | | |-<a href="vdb/names/5M.htm">OBCS_CALC</a> :: Open bndy. package ( see pkg/obcs ). |
| 223 |
/\ | | | |-<A HREF=vdb/names/5.htm>AIM_DO_ATMOS_PHYSICS</A> :: Intermed. atmos package ( see pkg/aim ). |
/\ | | | |-<a href="vdb/names/26.htm">EXTERNAL_FORCING_SURF</a> :: Accumulates appropriately dimensioned |
| 224 |
/\ | | | |-<A HREF=vdb/names/2I.htm>GAD_ADVECTION</A> :: Generalised advection driver (multi-dim |
/\ | | | | :: forcing terms. |
| 225 |
/\ | | | | advection case) (see pkg/gad). |
/\ | | | | |
| 226 |
/\ | | | |-<A HREF=vdb/names/L.htm>CALC_COMMON_FACTORS</A> :: Calculate common data (such as volume flux) |
/\ | | | |-<a href="vdb/names/2O.htm">GMREDI_CALC_TENSOR</a> :: GM package ( see pkg/gmredi ). |
| 227 |
/\ | | | |-<A HREF=vdb/names/M.htm>CALC_DIFFUSIVITY</A> :: Calculate net vertical diffusivity |
/\ | | | |-<a href="vdb/names/2P.htm">GMREDI_CALC_TENSOR_DUMMY</a> :: GM package ( see pkg/gmredi ). |
| 228 |
/\ | | | | | |
/\ | | | |-<a href="vdb/names/4L.htm">KPP_CALC</a> :: KPP package ( see pkg/kpp ). |
| 229 |
/\ | | | | |-<A HREF=vdb/names/2N.htm>GMREDI_CALC_DIFF</A> :: GM package ( see pkg/gmredi ). |
/\ | | | |-<a href="vdb/names/4N.htm">KPP_CALC_DUMMY</a> :: KPP package ( see pkg/kpp ). |
| 230 |
/\ | | | | |-<A HREF=vdb/names/4M.htm>KPP_CALC_DIFF</A> :: KPP package ( see pkg/kpp ). |
/\ | | | |-<a href="vdb/names/5.htm">AIM_DO_ATMOS_PHYSICS</a> :: Intermed. atmos package ( see pkg/aim ). |
| 231 |
/\ | | | | |
/\ | | | |-<a href="vdb/names/2I.htm">GAD_ADVECTION</a> :: Generalised advection driver (multi-dim |
| 232 |
/\ | | | |-<A HREF=vdb/names/T.htm>CALC_GT</A> :: Calculate the temperature tendency terms |
/\ | | | | advection case) (see pkg/gad). |
| 233 |
/\ | | | | | |
/\ | | | |-<a href="vdb/names/L.htm">CALC_COMMON_FACTORS</a> :: Calculate common data (such as volume flux) |
| 234 |
/\ | | | | |-<A HREF=vdb/names/2J.htm>GAD_CALC_RHS</A> :: Generalised advection package |
/\ | | | |-<a href="vdb/names/M.htm">CALC_DIFFUSIVITY</a> :: Calculate net vertical diffusivity |
| 235 |
/\ | | | | | :: ( see pkg/gad ) |
/\ | | | | | |
| 236 |
/\ | | | | |-<A HREF=vdb/names/27.htm>EXTERNAL_FORCING_T</A> :: Problem specific forcing for temperature. |
/\ | | | | |-<a href="vdb/names/2N.htm">GMREDI_CALC_DIFF</a> :: GM package ( see pkg/gmredi ). |
| 237 |
/\ | | | | |-<A HREF=vdb/names/2.htm>ADAMS_BASHFORTH2</A> :: Extrapolate tendencies forward in time. |
/\ | | | | |-<a href="vdb/names/4M.htm">KPP_CALC_DIFF</a> :: KPP package ( see pkg/kpp ). |
| 238 |
/\ | | | | |-<A HREF=vdb/names/2F.htm>FREESURF_RESCALE_G</A> :: Re-scale Gt for free-surface height. |
/\ | | | | |
| 239 |
/\ | | | | |
/\ | | | |-<a href="vdb/names/T.htm">CALC_GT</a> :: Calculate the temperature tendency terms |
| 240 |
/\ | | | |-<A HREF=vdb/names/6X.htm>TIMESTEP_TRACER</A> :: Step tracer field forward in time |
/\ | | | | | |
| 241 |
/\ | | | | |
/\ | | | | |-<a href="vdb/names/2J.htm">GAD_CALC_RHS</a> :: Generalised advection package |
| 242 |
/\ | | | |-<A HREF=vdb/names/S.htm>CALC_GS</A> :: Calculate the salinity tendency terms |
/\ | | | | | :: ( see pkg/gad ) |
| 243 |
/\ | | | | | |
/\ | | | | |-<a href="vdb/names/27.htm">EXTERNAL_FORCING_T</a> :: Problem specific forcing for temperature. |
| 244 |
/\ | | | | |-<A HREF=vdb/names/2J.htm>GAD_CALC_RHS</A> :: Generalised advection package |
/\ | | | | |-<a href="vdb/names/2.htm">ADAMS_BASHFORTH2</a> :: Extrapolate tendencies forward in time. |
| 245 |
/\ | | | | | :: ( see pkg/gad ) |
/\ | | | | |-<a href="vdb/names/2F.htm">FREESURF_RESCALE_G</a> :: Re-scale Gt for free-surface height. |
| 246 |
/\ | | | | |-<A HREF=vdb/names/25.htm>EXTERNAL_FORCING_S</A> :: Problem specific forcing for salt. |
/\ | | | | |
| 247 |
/\ | | | | |-<A HREF=vdb/names/2.htm>ADAMS_BASHFORTH2</A> :: Extrapolate tendencies forward in time. |
/\ | | | |-<a href="vdb/names/6X.htm">TIMESTEP_TRACER</a> :: Step tracer field forward in time |
| 248 |
/\ | | | | |-<A HREF=vdb/names/2F.htm>FREESURF_RESCALE_G</A> :: Re-scale Gs for free-surface height. |
/\ | | | | |
| 249 |
/\ | | | | |
/\ | | | |-<a href="vdb/names/S.htm">CALC_GS</a> :: Calculate the salinity tendency terms |
| 250 |
/\ | | | |-<A HREF=vdb/names/6X.htm>TIMESTEP_TRACER</A> :: Step tracer field forward in time |
/\ | | | | | |
| 251 |
/\ | | | | |
/\ | | | | |-<a href="vdb/names/2J.htm">GAD_CALC_RHS</a> :: Generalised advection package |
| 252 |
/\ | | | |-<A HREF=vdb/names/U.htm>CALC_GTR1</A> :: Calculate other tracer(s) tendency terms |
/\ | | | | | :: ( see pkg/gad ) |
| 253 |
/\ | | | | | |
/\ | | | | |-<a href="vdb/names/25.htm">EXTERNAL_FORCING_S</a> :: Problem specific forcing for salt. |
| 254 |
/\ | | | | |-<A HREF=vdb/names/2J.htm>GAD_CALC_RHS</A> :: Generalised advection package |
/\ | | | | |-<a href="vdb/names/2.htm">ADAMS_BASHFORTH2</a> :: Extrapolate tendencies forward in time. |
| 255 |
/\ | | | | | :: ( see pkg/gad ) |
/\ | | | | |-<a href="vdb/names/2F.htm">FREESURF_RESCALE_G</a> :: Re-scale Gs for free-surface height. |
| 256 |
/\ | | | | |-<A HREF=vdb/names/28.htm>EXTERNAL_FORCING_TR</A> :: Problem specific forcing for tracer. |
/\ | | | | |
| 257 |
/\ | | | | |-<A HREF=vdb/names/2.htm>ADAMS_BASHFORTH2</A> :: Extrapolate tendencies forward in time. |
/\ | | | |-<a href="vdb/names/6X.htm">TIMESTEP_TRACER</a> :: Step tracer field forward in time |
| 258 |
/\ | | | | |-<A HREF=vdb/names/2F.htm>FREESURF_RESCALE_G</A> :: Re-scale Gs for free-surface height. |
/\ | | | | |
| 259 |
/\ | | | | |
/\ | | | |-<a href="vdb/names/U.htm">CALC_GTR1</a> :: Calculate other tracer(s) tendency terms |
| 260 |
/\ | | | |-<A HREF=vdb/names/6X.htm>TIMESTEP_TRACER</A> :: Step tracer field forward in time |
/\ | | | | | |
| 261 |
/\ | | | |-<A HREF=vdb/names/5I.htm>OBCS_APPLY_TS</A> :: Open bndy. package (see pkg/obcs ). |
/\ | | | | |-<a href="vdb/names/2J.htm">GAD_CALC_RHS</a> :: Generalised advection package |
| 262 |
/\ | | | |-<A HREF=vdb/names/2H.htm>FREEZE</A> :: Limit range of temperature. |
/\ | | | | | :: ( see pkg/gad ) |
| 263 |
/\ | | | | |
/\ | | | | |-<a href="vdb/names/28.htm">EXTERNAL_FORCING_TR</a> :: Problem specific forcing for tracer. |
| 264 |
/\ | | | |-<A HREF=vdb/names/3E.htm>IMPLDIFF</A> :: Solve vertical implicit diffusion equation. |
/\ | | | | |-<a href="vdb/names/2.htm">ADAMS_BASHFORTH2</a> :: Extrapolate tendencies forward in time. |
| 265 |
/\ | | | |-<A HREF=vdb/names/5I.htm>OBCS_APPLY_TS</A> :: Open bndy. package (see pkg/obcs ). |
/\ | | | | |-<a href="vdb/names/2F.htm">FREESURF_RESCALE_G</a> :: Re-scale Gs for free-surface height. |
| 266 |
/\ | | | | |
/\ | | | | |
| 267 |
/\ | | | |-<A HREF=vdb/names/4.htm>AIM_AIM2DYN_EXCHANGES</A> :: Inetermed. atmos (see pkg/aim). |
/\ | | | |-<a href="vdb/names/6X.htm">TIMESTEP_TRACER</a> :: Step tracer field forward in time |
| 268 |
/\ | | | |-<A HREF=vdb/names/.htm>EXCH_XYZ_RX</A> :: Update overlaps |
/\ | | | |-<a href="vdb/names/5I.htm">OBCS_APPLY_TS</a> :: Open bndy. package (see pkg/obcs ). |
| 269 |
/\ | | | |
/\ | | | |-<a href="vdb/names/2H.htm">FREEZE</a> :: Limit range of temperature. |
| 270 |
/\ | | |-<A HREF=vdb/names/1S.htm>DYNAMICS</A> :: Momentum equations driver. |
/\ | | | | |
| 271 |
/\ | | | | |
/\ | | | |-<a href="vdb/names/3E.htm">IMPLDIFF</a> :: Solve vertical implicit diffusion equation. |
| 272 |
/\ | | | |-<A HREF=vdb/names/Q.htm>CALC_GRAD_PHI_SURF</A> :: Calculate the gradient of the surface |
/\ | | | |-<a href="vdb/names/5I.htm">OBCS_APPLY_TS</a> :: Open bndy. package (see pkg/obcs ). |
| 273 |
/\ | | | | Potential anomaly. |
/\ | | | | |
| 274 |
/\ | | | |-<A HREF=vdb/names/Z.htm>CALC_VISCOSITY</A> :: Calculate net vertical viscosity |
/\ | | | |-<a href="vdb/names/4.htm">AIM_AIM2DYN_EXCHANGES</a> :: Inetermed. atmos (see pkg/aim). |
| 275 |
/\ | | | | |-<A HREF=vdb/names/4O.htm>KPP_CALC_VISC</A> :: KPP package ( see pkg/kpp ). |
/\ | | | |-<a href="vdb/names/.htm">EXCH_XYZ_RX</a> :: Update overlaps |
| 276 |
/\ | | | | |
/\ | | | |
| 277 |
/\ | | | |-<A HREF=vdb/names/X.htm>CALC_PHI_HYD</A> :: Integrate the hydrostatic relation. |
/\ | | |-<a href="vdb/names/1S.htm">DYNAMICS</a> :: Momentum equations driver. |
| 278 |
/\ | | | |-<A HREF=vdb/names/59.htm>MOM_FLUXFORM</A> :: Flux form mom eqn. package ( see |
/\ | | | | |
| 279 |
/\ | | | | pkg/mom_fluxform ). |
/\ | | | |-<a href="vdb/names/Q.htm">CALC_GRAD_PHI_SURF</a> :: Calculate the gradient of the surface |
| 280 |
/\ | | | |-<A HREF=vdb/names/5A.htm>MOM_VECINV</A> :: Vector invariant form mom eqn. package ( see |
/\ | | | | Potential anomaly. |
| 281 |
/\ | | | | pkg/mom_vecinv ). |
/\ | | | |-<a href="vdb/names/Z.htm">CALC_VISCOSITY</a> :: Calculate net vertical viscosity |
| 282 |
/\ | | | |-<A HREF=vdb/names/6W.htm>TIMESTEP</A> :: Step momentum fields forward in time |
/\ | | | | |-<a href="vdb/names/4O.htm">KPP_CALC_VISC</a> :: KPP package ( see pkg/kpp ). |
| 283 |
/\ | | | |-<A HREF=vdb/names/5K.htm>OBCS_APPLY_UV</A> :: Open bndy. package (see pkg/obcs ). |
/\ | | | | |
| 284 |
/\ | | | | |
/\ | | | |-<a href="vdb/names/X.htm">CALC_PHI_HYD</a> :: Integrate the hydrostatic relation. |
| 285 |
/\ | | | |-<A HREF=vdb/names/3E.htm>IMPLDIFF</A> :: Solve vertical implicit diffusion equation. |
/\ | | | |-<a href="vdb/names/59.htm">MOM_FLUXFORM</a> :: Flux form mom eqn. package ( see |
| 286 |
/\ | | | |-<A HREF=vdb/names/5K.htm>OBCS_APPLY_UV</A> :: Open bndy. package (see pkg/obcs ). |
/\ | | | | pkg/mom_fluxform ). |
| 287 |
/\ | | | | |
/\ | | | |-<a href="vdb/names/5A.htm">MOM_VECINV</a> :: Vector invariant form mom eqn. package ( see |
| 288 |
/\ | | | |-<A HREF=vdb/names/6S.htm>TIMEAVE_CUMUL_1T</A> :: Time averaging package ( see pkg/timeave ). |
/\ | | | | pkg/mom_vecinv ). |
| 289 |
/\ | | | |-<A HREF=vdb/names/6R.htm>TIMEAVE_CUMULATE</A> :: Time averaging package ( see pkg/timeave ). |
/\ | | | |-<a href="vdb/names/6W.htm">TIMESTEP</a> :: Step momentum fields forward in time |
| 290 |
/\ | | | |-<A HREF=vdb/names/1O.htm>DEBUG_STATS_RL</A> :: Quick debug package ( see pkg/debug ). |
/\ | | | |-<a href="vdb/names/5K.htm">OBCS_APPLY_UV</a> :: Open bndy. package (see pkg/obcs ). |
| 291 |
/\ | | | |
/\ | | | | |
| 292 |
/\ | | |-<A HREF=vdb/names/V.htm>CALC_GW</A> :: vert. momentum tendency terms ( NH, QH only ). |
/\ | | | |-<a href="vdb/names/3E.htm">IMPLDIFF</a> :: Solve vertical implicit diffusion equation. |
| 293 |
/\ | | | |
/\ | | | |-<a href="vdb/names/5K.htm">OBCS_APPLY_UV</a> :: Open bndy. package (see pkg/obcs ). |
| 294 |
/\ | | |-<A HREF=vdb/names/73.htm>UPDATE_SURF_DR</A> :: Update the surface-level thickness fraction. |
/\ | | | | |
| 295 |
/\ | | | |
/\ | | | |-<a href="vdb/names/6S.htm">TIMEAVE_CUMUL_1T</a> :: Time averaging package ( see pkg/timeave ). |
| 296 |
/\ | | |-<A HREF=vdb/names/72.htm>UPDATE_CG2D</A> :: Update 2d conjugate grad. for Free-Surf. |
/\ | | | |-<a href="vdb/names/6R.htm">TIMEAVE_CUMULATE</a> :: Time averaging package ( see pkg/timeave ). |
| 297 |
/\ | | | |
/\ | | | |-<a href="vdb/names/1O.htm">DEBUG_STATS_RL</a> :: Quick debug package ( see pkg/debug ). |
| 298 |
/\ | | |-<A HREF=vdb/names/6I.htm>SOLVE_FOR_PRESSURE</A> :: Find surface pressure. |
/\ | | | |
| 299 |
/\ | | | |-<A HREF=vdb/names/N.htm>CALC_DIV_GHAT</A> :: Form the RHS of the surface pressure eqn. |
/\ | | |-<a href="vdb/names/V.htm">CALC_GW</a> :: vert. momentum tendency terms ( NH, QH only ). |
| 300 |
/\ | | | |-<A HREF=vdb/names/10.htm>CG2D</A> :: Two-dim pre-con. conjugate-gradient. |
/\ | | | |
| 301 |
/\ | | | |-<A HREF=vdb/names/12.htm>CG3D</A> :: Three-dim pre-con. conjugate-gradient solver. |
/\ | | |-<a href="vdb/names/73.htm">UPDATE_SURF_DR</a> :: Update the surface-level thickness fraction. |
| 302 |
/\ | | | |
/\ | | | |
| 303 |
/\ | | |-<A HREF=vdb/names/6M.htm>THE_CORRECTION_STEP</A> :: Step forward to next time step. |
/\ | | |-<a href="vdb/names/72.htm">UPDATE_CG2D</a> :: Update 2d conjugate grad. for Free-Surf. |
| 304 |
/\ | | | | |
/\ | | | |
| 305 |
/\ | | | |-<A HREF=vdb/names/Q.htm>CALC_GRAD_PHI_SURF</A> :: Return DDx and DDy of surface pressure |
/\ | | |-<a href="vdb/names/6I.htm">SOLVE_FOR_PRESSURE</a> :: Find surface pressure. |
| 306 |
/\ | | | |-<A HREF=vdb/names/18.htm>CORRECTION_STEP</A> :: Pressure correction to momentum |
/\ | | | |-<a href="vdb/names/N.htm">CALC_DIV_GHAT</a> :: Form the RHS of the surface pressure eqn. |
| 307 |
/\ | | | |-<A HREF=vdb/names/1J.htm>CYCLE_TRACER</A> :: Move tracers forward in time. |
/\ | | | |-<a href="vdb/names/10.htm">CG2D</a> :: Two-dim pre-con. conjugate-gradient. |
| 308 |
/\ | | | |-<A HREF=vdb/names/5K.htm>OBCS_APPLY_UV</A> :: Open bndy package. see pkg/obcs |
/\ | | | |-<a href="vdb/names/12.htm">CG3D</a> :: Three-dim pre-con. conjugate-gradient solver. |
| 309 |
/\ | | | |-<A HREF=vdb/names/6E.htm>SHAP_FILT_APPLY</A> :: Shapiro filter package. see pkg/shap_filt |
/\ | | | |
| 310 |
/\ | | | |-<A HREF=vdb/names/7N.htm>ZONAL_FILT_APPLY</A> :: FFT filter package. see pkg/zonal_filt |
/\ | | |-<a href="vdb/names/6M.htm">THE_CORRECTION_STEP</a> :: Step forward to next time step. |
| 311 |
/\ | | | |-<A HREF=vdb/names/16.htm>CONVECTIVE_ADJUSTMENT</A> :: Control static instability mixing. |
/\ | | | | |
| 312 |
/\ | | | | |-<A HREF=vdb/names/2A.htm>FIND_RHO</A> :: Find adjacent densities. |
/\ | | | |-<a href="vdb/names/Q.htm">CALC_GRAD_PHI_SURF</a> :: Return DDx and DDy of surface pressure |
| 313 |
/\ | | | | |-<A HREF=vdb/names/15.htm>CONVECT</A> :: Mix static instability. |
/\ | | | |-<a href="vdb/names/18.htm">CORRECTION_STEP</a> :: Pressure correction to momentum |
| 314 |
/\ | | | | |-<A HREF=vdb/names/6R.htm>TIMEAVE_CUMULATE</A> :: Update convection statistics. |
/\ | | | |-<a href="vdb/names/1J.htm">CYCLE_TRACER</a> :: Move tracers forward in time. |
| 315 |
/\ | | | | |
/\ | | | |-<a href="vdb/names/5K.htm">OBCS_APPLY_UV</a> :: Open bndy package. see pkg/obcs |
| 316 |
/\ | | | |-<A HREF=vdb/names/O.htm>CALC_EXACT_ETA</A> :: Change SSH to flow divergence. |
/\ | | | |-<a href="vdb/names/6E.htm">SHAP_FILT_APPLY</a> :: Shapiro filter package. see pkg/shap_filt |
| 317 |
/\ | | | |
/\ | | | |-<a href="vdb/names/7N.htm">ZONAL_FILT_APPLY</a> :: FFT filter package. see pkg/zonal_filt |
| 318 |
/\ | | |-<A HREF=vdb/names/1P.htm>DO_FIELDS_BLOCKING_EXCHANGES</A> :: Sync up overlap regions. |
/\ | | | |-<a href="vdb/names/16.htm">CONVECTIVE_ADJUSTMENT</a> :: Control static instability mixing. |
| 319 |
/\ | | | |-<A HREF=vdb/names/.htm>EXCH_XYZ_RX</A> :: Update overlaps |
/\ | | | | |-<a href="vdb/names/2A.htm">FIND_RHO</a> :: Find adjacent densities. |
| 320 |
/\ | | | |
/\ | | | | |-<a href="vdb/names/15.htm">CONVECT</a> :: Mix static instability. |
| 321 |
/\ | | |-<A HREF=vdb/names/2D.htm>FLT_MAIN</A> :: Float package ( pkg/flt ). |
/\ | | | | |-<a href="vdb/names/6R.htm">TIMEAVE_CUMULATE</a> :: Update convection statistics. |
| 322 |
/\ | | | |
/\ | | | | |
| 323 |
/\ | | |-<A HREF=vdb/names/5B.htm>MONITOR</A> :: Monitor package ( pkg/monitor ). |
/\ | | | |-<a href="vdb/names/O.htm">CALC_EXACT_ETA</a> :: Change SSH to flow divergence. |
| 324 |
/\ | | | |
/\ | | | |
| 325 |
/\ | | |-<A HREF=vdb/names/1Q.htm>DO_THE_MODEL_IO</A> :: Standard diagnostic I/O. |
/\ | | |-<a href="vdb/names/1P.htm">DO_FIELDS_BLOCKING_EXCHANGES</a> :: Sync up overlap regions. |
| 326 |
/\ | | | |-<A HREF=vdb/names/7K.htm>WRITE_STATE</A> :: Core state I/O |
/\ | | | |-<a href="vdb/names/.htm">EXCH_XYZ_RX</a> :: Update overlaps |
| 327 |
/\ | | | |-<A HREF=vdb/names/6U.htm>TIMEAVE_STATV_WRITE</A> :: Time averages. see pkg/timeave |
/\ | | | |
| 328 |
/\ | | | |-<A HREF=vdb/names/8.htm>AIM_WRITE_DIAGS</A> :: Intermed. atmos diags. see pkg/aim |
/\ | | |-<a href="vdb/names/2D.htm">FLT_MAIN</a> :: Float package ( pkg/flt ). |
| 329 |
/\ | | | |-<A HREF=vdb/names/2R.htm>GMREDI_DIAGS</A> :: GM diags. see pkg/gmredi |
/\ | | | |
| 330 |
/\ | | | |-<A HREF=vdb/names/4Q.htm>KPP_DO_DIAGS</A> :: KPP diags. see pkg/kpp |
/\ | | |-<a href="vdb/names/5B.htm">MONITOR</a> :: Monitor package ( pkg/monitor ). |
| 331 |
/\ | | | |
/\ | | | |
| 332 |
/\ | | |-<A HREF=vdb/names/7G.htm>WRITE_CHECKPOINT</A> :: Do I/O for restart files. |
/\ | | |-<a href="vdb/names/1Q.htm">DO_THE_MODEL_IO</a> :: Standard diagnostic I/O. |
| 333 |
/\ | | |
/\ | | | |-<a href="vdb/names/7K.htm">WRITE_STATE</a> :: Core state I/O |
| 334 |
/\ | |-<A HREF=vdb/names/1C.htm>COST_TILE</A> :: Cost function package. ( see pkg/cost ) |
/\ | | | |-<a href="vdb/names/6U.htm">TIMEAVE_STATV_WRITE</a> :: Time averages. see pkg/timeave |
| 335 |
<===|=| |
/\ | | | |-<a href="vdb/names/8.htm">AIM_WRITE_DIAGS</a> :: Intermed. atmos diags. see pkg/aim |
| 336 |
<===|=| ************************** |
/\ | | | |-<a href="vdb/names/2R.htm">GMREDI_DIAGS</a> :: GM diags. see pkg/gmredi |
| 337 |
<===|=| END MAIN TIMESTEPPING LOOP |
/\ | | | |-<a href="vdb/names/4Q.htm">KPP_DO_DIAGS</a> :: KPP diags. see pkg/kpp |
| 338 |
<===|=| ************************** |
/\ | | | |
| 339 |
<===|=| |
/\ | | |-<a href="vdb/names/7G.htm">WRITE_CHECKPOINT</a> :: Do I/O for restart files. |
| 340 |
| |-<A HREF=vdb/names/19.htm>COST_FINAL</A> :: Cost function package. ( see pkg/cost ) |
/\ | | |
| 341 |
| |
/\ | |-<a href="vdb/names/1C.htm">COST_TILE</a> :: Cost function package. ( see pkg/cost ) |
| 342 |
|-<A HREF=vdb/names/7G.htm>WRITE_CHECKPOINT</A> :: Final state storage, for restart. |
<===|=| |
| 343 |
| |
<===|=| ************************** |
| 344 |
|-<A HREF=vdb/names/6V.htm>TIMER_PRINTALL</A> :: Computational timing summary |
<===|=| END MAIN TIMESTEPPING LOOP |
| 345 |
| |
<===|=| ************************** |
| 346 |
|-<A HREF=vdb/names/13.htm>COMM_STATS</A> :: Summarise inter-proc and inter-thread communication |
<===|=| |
| 347 |
:: events. |
| |-<a href="vdb/names/19.htm">COST_FINAL</a> :: Cost function package. ( see pkg/cost ) |
| 348 |
|
| |
| 349 |
</PRE> |
|-<a href="vdb/names/7G.htm">WRITE_CHECKPOINT</a> :: Final state storage, for restart. |
| 350 |
</BODY> |
| |
| 351 |
</HTML> |
|-<a href="vdb/names/6V.htm">TIMER_PRINTALL</a> :: Computational timing summary |
| 352 |
|
| |
| 353 |
|
|-<a href="vdb/names/13.htm">COMM_STATS</a> :: Summarise inter-proc and inter-thread communication |
| 354 |
|
:: events. |
| 355 |
|
</pre> |
| 356 |
|
|
| 357 |
|
</body> |
| 358 |
|
</html> |