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jmc |
1.1 |
#! /usr/bin/env bash |
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jmc |
1.20 |
# $Header: /u/gcmpack/mitgcm.org/scripts/check_outp,v 1.19 2009/09/01 20:27:24 jmc Exp $ |
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jmc |
1.1 |
# |
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# The purpose of this script is to compare |
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# the latest output with the previous one (from the same platform with |
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# same optfile) |
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usage() |
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{ |
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echo |
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echo "Usage: $0 [OPTIONS]" |
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echo |
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echo "where possible OPTIONS are:" |
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echo " (-h|-help) print usage" |
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echo " (-v|-verbose) verbose mode" |
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echo " (-l |-list )MACHINES check platforms from this list" |
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echo " [def=\"$MACHINES\"]" |
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echo " (-d |-day )FIRSTDAY select output from day=\"YYYYMMDD\"" |
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jmc |
1.5 |
echo " (argument of \"date -d\" is allowed)" |
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jmc |
1.1 |
echo " [def=\"$FIRSTDAY\"]" |
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echo " (-u |-upto )LASTDAY until last day=\"YYYYMMDD\" (=selected period)" |
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echo " [def=\"FIRSTDAY\"]" |
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echo " (-o |-outp )OUTPFIL output file (-1 removed when exit)" |
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echo " [def=\"$OUTPFIL\"]" |
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echo " (-n |-nldf )NBLDIFF max number of diff lines to echo" |
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echo " [def=\"$NBLDIFF\"]" |
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echo " (-a |-addr )ADDRESS send summary to mail ADDRESS list" |
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echo " [def=\"$ADDRESS\"]" |
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echo |
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exit 1 |
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} |
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jmc |
1.16 |
# create list of results dir for one platform: |
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make_resdir_list() |
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{ |
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if test $monthDir == 1 ; then |
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dir_list=`grep $mname ./dir_all` |
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else |
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dir_list=`( cd $INDIR ; ls -1 -t ../$PREV_P/*${mname}*/summary.txt 2> /dev/null | sed 's/\/summary.txt//' )` |
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#echo "dir_list='$dir_list'" |
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fi |
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for i in $dir_list ; do |
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dir=$INDIR"/"$i |
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OPTFILE= |
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if test -r $dir/summary.txt ; then |
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comm=`grep 'OPTFILE=' $dir/summary.txt` |
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eval $comm |
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OPTFILE=${OPTFILE##*/} |
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fi |
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if test "x$OPTFILE" = x -a -r "$dir/genmake_state" ; then |
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comm=`grep 'OPTFILE=' $dir/genmake_state 2>/dev/null` |
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eval $comm |
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OPTFILE=${OPTFILE##*/} |
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fi |
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if test "x$OPTFILE" = x ; then |
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comm=`grep '^# OPTFILE=' $dir/*/Makefile* 2>/dev/null | head -1` |
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comm=${comm##*#} |
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eval $comm |
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OPTFILE=${OPTFILE##*/} |
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fi |
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if test "x$OPTFILE" = x ; then |
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OPTFILE="not_explicitly_specified" |
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fi |
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ADJOINT= |
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RESTART=0 |
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NOI3E=0 |
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MTH=0 |
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if test -r $dir/summary.txt ; then |
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comm=`grep 'ADJOINT=true' $dir/summary.txt 2>/dev/null` |
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eval $comm |
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RESTART=`grep -c 'test 2+2=4 summary' $dir/summary.txt` |
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NOI3E=`grep -c "^run: .*testreport.* '*-noieee'*" $dir/summary.txt` |
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MTH=`grep -c "^run: .*testreport.* -mth" $dir/summary.txt` |
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fi |
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if test "x$RESTART" = x0 ; then |
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kind="forward" |
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test "x$ADJOINT" = xtrue && kind="adjoint" |
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else |
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kind="restart" |
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fi |
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if test "x$MTH" = x1 ; then |
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yy=`echo $OPTFILE | grep -c '+mth$'` |
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if test $yy = 0 ; then OPTFILE="${OPTFILE}+mth" ; fi |
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fi |
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if test "x$NOI3E" = x1 ; then |
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OPTFILE="${OPTFILE}.noieee" |
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fi |
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day=`echo $i | sed -e 's/_[0-9]$//' | sed -e 's/_[0-9][0-9]$//'` |
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ttt=`echo $day | sed -e 's/_[0-9]$//' | sed -e 's/_[0-9][0-9]$//'` |
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day=`echo $ttt | sed -e 's|_| |g' |awk '{print $NF}'` |
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if [ $day -lt $FIRSTDAY ] ; then |
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echo "$OPTFILE$kind $day $OPTFILE $kind $i" >> ./plist |
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elif [ $day -le $LASTDAY ] ; then |
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echo "$OPTFILE$kind $day $OPTFILE $kind $i" >> ./slist |
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else |
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if test $dBug = 't' ; then |
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echo "discard day='$day' from: $i" | tee -a $OUTPFIL |
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fi |
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fi |
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done |
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if test $dBug = 't' ; then |
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if test $monthDir == 1 ; then |
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echo "---- current list (n=$monthDir) :" | tee -a $OUTPFIL |
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cat ./slist | tee -a $OUTPFIL |
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fi |
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num1=`wc -l ./slist | awk '{print $1}'` |
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if test $num1 -gt 0 ; then |
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echo ".... previous list (n=$monthDir):" | tee -a $OUTPFIL |
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cat ./plist | tee -a $OUTPFIL | head -20 |
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fi |
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echo "----" | tee -a $OUTPFIL |
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fi |
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} |
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#-------------------------------------------------------------------------- |
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# here starts the sequential part of the script: |
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jmc |
1.1 |
#CURR_PER=`date +%Y`"_"`date +%m` |
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CURR_DAY=`date +%Y%m%d` |
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# defaults |
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MACHINES='_All_' |
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FIRSTDAY=$CURR_DAY |
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LASTDAY="30000000" |
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OUTPFIL=`basename $0`'.log' |
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NBLDIFF=5 |
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ADDRESS='none' |
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dBug=f |
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sTime=`date` |
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jmc |
1.12 |
#- to get case insensitive "ls" (and order of tested experiments) |
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export LC_ALL="en_US.UTF-8" |
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jmc |
1.1 |
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# Parse options |
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ac_prev= |
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for ac_option ; do |
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# If the previous option needs an argument, assign it. |
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if test -n "$ac_prev"; then |
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eval "$ac_prev=\$ac_option" |
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ac_prev= |
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continue |
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fi |
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ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'` |
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case $ac_option in |
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-help | --help | -h | --h) |
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usage ;; |
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-verbose | --verbose | -v | --v) |
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dBug=t ;; |
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-list | --list | -l | --l) |
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ac_prev=MACHINES ;; |
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-list=* | --list=*) |
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MACHINES=$ac_optarg ;; |
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-day | --day | -d | --d) |
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ac_prev=FIRSTDAY ;; |
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-day=* | --day=*) |
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FIRSTDAY=$ac_optarg ;; |
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-upto | --upto | -u | --u) |
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ac_prev=LASTDAY ;; |
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-upto=* | --upto=*) |
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LASTDAY=$ac_optarg ;; |
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-outp | --outp | -o | --o) |
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ac_prev=OUTPFIL ;; |
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-outp=* | --outp=*) |
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OUTPFIL=$ac_optarg ;; |
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-nldf | --nldf | -n | --n) |
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ac_prev=NBLDIFF ;; |
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-nldf=* | --nldf=*) |
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NBLDIFF=$ac_optarg ;; |
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-addr | --addr | -a | --a) |
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ac_prev=ADDRESS ;; |
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-addr=* | --addr=*) |
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ADDRESS=$ac_optarg ;; |
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*) |
| 189 |
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echo "Error: don't understand argument \"$ac_option\"" |
| 190 |
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usage |
| 191 |
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;; |
| 192 |
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| 193 |
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esac |
| 194 |
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| 195 |
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done |
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jmc |
1.5 |
#-- test FIRSTDAY content ; interpret as "date -d" arg. if not YYYYMMDD |
| 197 |
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ttt=`echo "y$FIRSTDAY" | sed 's/[0-9][0-9][0-9][0-9][0-9][0-9][0-9][0-9]/z/'` |
| 198 |
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if test "x$ttt" != 'xyz' ; then |
| 199 |
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FIRSTDAY=`date -d "$FIRSTDAY" +%Y%m%d` |
| 200 |
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fi |
| 201 |
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ttt=`echo "y$FIRSTDAY" | sed 's/[0-9][0-9][0-9][0-9][0-9][0-9][0-9][0-9]/z/'` |
| 202 |
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if test "x$ttt" != 'xyz' ; then |
| 203 |
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echo "Error: FIRSTDAY='$FIRSDAY' not recognized" |
| 204 |
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exit 2 |
| 205 |
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fi |
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jmc |
1.1 |
if test $LASTDAY = "30000000" ; then LASTDAY=$FIRSTDAY ; fi |
| 207 |
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CMDLINE=$0 |
| 208 |
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for xx in "$@" ; do nw=`echo $xx | wc -w` |
| 209 |
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if test $nw = '1' ; then CMDLINE="$CMDLINE $xx" |
| 210 |
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else CMDLINE="$CMDLINE '$xx'" ; fi |
| 211 |
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done |
| 212 |
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| 213 |
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PERIOD=`echo $FIRSTDAY | sed 's/[0-9][0-9]$//'` |
| 214 |
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PP=`expr $PERIOD - 1` |
| 215 |
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PM=`echo $PP | sed 's/^[0-9][0-9][0-9][0-9]//'` |
| 216 |
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PY=`echo $PP | sed 's/[0-9][0-9]$//'` |
| 217 |
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if test $PM == '00' ; then PM='12' ; PY=`expr $PY - 1` ; fi |
| 218 |
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PREV_P="${PY}_${PM}"; |
| 219 |
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PERIOD=`echo $PERIOD | sed 's/^[0-9][0-9][0-9][0-9]/&_/'` |
| 220 |
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| 221 |
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#INDIR="/net/orwell/export/export-9/mitgcm-testing/results/$PERIOD" |
| 222 |
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INDIR="/u/u0/httpd/html/testing/results/$PERIOD" |
| 223 |
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#INDIR="/export/export-7/u/u2/jmc/mitgcm/test_web/results/$PERIOD" |
| 224 |
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| 225 |
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if test $OUTPFIL = '-1' ; then |
| 226 |
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OUTPFIL='TTT.'$$ |
| 227 |
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elif test -e $OUTPFIL ; then |
| 228 |
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mv -f $OUTPFIL $OUTPFIL'_bak' |
| 229 |
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fi |
| 230 |
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echo "CMDLINE='$CMDLINE'" > $OUTPFIL |
| 231 |
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echo "PERIOD='$PERIOD' , PREV_P='$PREV_P'" >> $OUTPFIL |
| 232 |
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echo "INDIR='$INDIR'" >> $OUTPFIL |
| 233 |
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echo "Checking latest output from $FIRSTDAY until $LASTDAY" >> $OUTPFIL |
| 234 |
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| 235 |
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if test $dBug = 't' ; then |
| 236 |
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echo "PERIOD='$PERIOD' , PREV_P='$PREV_P'" |
| 237 |
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echo "FIRSTDAY='$FIRSTDAY' , LASTDAY='$LASTDAY'" |
| 238 |
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fi |
| 239 |
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if test -d $INDIR ; then |
| 240 |
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dirP=`echo $INDIR | sed "s/$PERIOD/$PREV_P/"` |
| 241 |
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if test -d $dirP ; then |
| 242 |
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listNum='1 2' |
| 243 |
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else |
| 244 |
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echo "$dirP is not a directory" |
| 245 |
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listNum='1' |
| 246 |
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fi |
| 247 |
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else |
| 248 |
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echo "$INDIR is not a directory" |
| 249 |
jmc |
1.5 |
exit 3 |
| 250 |
jmc |
1.1 |
fi |
| 251 |
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| 252 |
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#- a short summary of this checking : |
| 253 |
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OUTPSUM=`echo $FIRSTDAY | sed 's/^20../_/'` |
| 254 |
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OUTPSUM=`basename $0`"$OUTPSUM.txt" |
| 255 |
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if test -e $OUTPSUM ; then mv -f $OUTPSUM $OUTPSUM'_bak' ; fi |
| 256 |
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echo ' '$CMDLINE > $OUTPSUM |
| 257 |
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| 258 |
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if test $FIRSTDAY = $LASTDAY ; then |
| 259 |
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echo -n "Checking latest output from $FIRSTDAY" | tee -a $OUTPSUM |
| 260 |
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else |
| 261 |
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echo -n "Checking latest output from $FIRSTDAY until $LASTDAY" | tee -a $OUTPSUM |
| 262 |
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fi |
| 263 |
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echo " versus latest prior to this period" | tee -a $OUTPSUM |
| 264 |
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echo " Machine Tot. Nb. no Nb with Nb diff" >> $OUTPSUM |
| 265 |
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echo " name checked comp Diff lines" >> $OUTPSUM |
| 266 |
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| 267 |
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( cd $INDIR ; ls -1 -t */summary.txt | sed 's/\/summary.txt//' ) > ./dir_all |
| 268 |
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| 269 |
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if test "x$MACHINES" = "x_All_" ; then |
| 270 |
jmc |
1.14 |
MACHINES="faulks meander lagoon harbor dickens danton aces" |
| 271 |
jmc |
1.20 |
MACHINES="$MACHINES beagle columbia pleiades edvir rays solasrv sx8 xd1" |
| 272 |
jmc |
1.14 |
MACHINES="$MACHINES bigred starp" |
| 273 |
jmc |
1.1 |
|
| 274 |
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MALL=`cat ./dir_all | sed -e 's|_| |g' | awk '{print $2}' | sort | uniq` |
| 275 |
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for madd in $MALL ; do |
| 276 |
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present=0 |
| 277 |
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for m in $MACHINES ; do |
| 278 |
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echo $madd | grep $m > /dev/null 2>&1 |
| 279 |
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RETVAL=$? |
| 280 |
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test $RETVAL = 0 && present=1 |
| 281 |
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continue |
| 282 |
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done |
| 283 |
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test $present = 0 && MACHINES="$MACHINES $madd" |
| 284 |
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done |
| 285 |
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fi |
| 286 |
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| 287 |
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for mname in $MACHINES ; do |
| 288 |
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| 289 |
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if test $dBug = 't' ; then echo " $mname" ; fi |
| 290 |
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echo " name='$mname'" >> $OUTPFIL |
| 291 |
|
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ctot=0 ; cmis=0 ; cdif=0 |
| 292 |
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| 293 |
|
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# put results from selected period in "slist", |
| 294 |
|
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# results from previous period in "plist" |
| 295 |
|
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rm -f ./plist ./slist ; touch ./plist ./slist |
| 296 |
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| 297 |
jmc |
1.16 |
#- create list of results (slist & plist) from current month directory |
| 298 |
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monthDir=1 |
| 299 |
|
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make_resdir_list |
| 300 |
jmc |
1.1 |
|
| 301 |
|
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# Do we have any data? If so, create the latest pointer. |
| 302 |
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num=`wc -l ./slist | awk '{print $1}'` |
| 303 |
|
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if test $num -gt 0 ; then |
| 304 |
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| 305 |
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keys=`cat ./slist | cut -d " " -f 1 | sort | uniq` |
| 306 |
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| 307 |
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for key in $keys ; do |
| 308 |
|
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ctot=`expr $ctot + 1` |
| 309 |
|
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sline=`grep "^$key " ./slist | head -1` |
| 310 |
|
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sdir=`echo $sline | cut -d " " -f 5` |
| 311 |
jmc |
1.17 |
type=`echo $sline | cut -d " " -f 4` |
| 312 |
jmc |
1.1 |
optf=`echo $sline | cut -d " " -f 3` |
| 313 |
|
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num=`grep -c "^$key" ./plist` |
| 314 |
jmc |
1.16 |
if test $num = 0 -a $monthDir = 1 ; then |
| 315 |
|
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#- add results from previous month directory to "plist". |
| 316 |
|
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monthDir=2 |
| 317 |
|
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make_resdir_list |
| 318 |
|
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num=`grep -c "^$key" ./plist` |
| 319 |
|
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fi |
| 320 |
jmc |
1.1 |
#- discard unsafe test: |
| 321 |
jmc |
1.18 |
dd=`echo $optf | grep -c 'gfortran+mth'` |
| 322 |
jmc |
1.13 |
#if test $mname = 'lagoon' -a $dd = 1 ; then num=-1 ; fi |
| 323 |
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#if test $mname = 'harbor' -a $dd = 1 ; then num=-1 ; fi |
| 324 |
|
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#if test $mname = 'aces' -a $optf = 'linux_ia32_open64' ; then num=-1 ; fi |
| 325 |
|
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#if test $mname = 'aces' -a $optf = 'linux_ia32_g95' ; then num=-1 ; fi |
| 326 |
jmc |
1.18 |
dd=`echo $optf | grep -c 'bigred.*+mth'` |
| 327 |
|
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#if test $mname = 'bigred' -a $dd = 1 ; then num=-1 ; fi |
| 328 |
|
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if test $num -lt 0 ; then |
| 329 |
|
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echo " discard $sdir : $type , of='$optf'" | tee -a $OUTPFIL |
| 330 |
|
|
cmis=`expr $cmis + 1` |
| 331 |
|
|
elif test $num = '0' ; then |
| 332 |
|
|
echo "no previous test for:" $key | tee -a $OUTPFIL |
| 333 |
|
|
cmis=`expr $cmis + 1` |
| 334 |
|
|
else |
| 335 |
jmc |
1.1 |
pline=`grep "^$key " ./plist | head -1` |
| 336 |
|
|
if test $dBug = 't' ; then |
| 337 |
|
|
echo "s='$sline'" | tee -a $OUTPFIL |
| 338 |
|
|
echo "p='$pline'" | tee -a $OUTPFIL |
| 339 |
|
|
fi |
| 340 |
|
|
pdir=`echo $pline | cut -d " " -f 5` |
| 341 |
|
|
outs="$INDIR/$sdir/summary.txt" |
| 342 |
|
|
sed -n "5,$ p" $outs | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' \ |
| 343 |
jmc |
1.4 |
| sed 's/ OPTFILE=.*\// OPTFILE=/g' \ |
| 344 |
jmc |
1.1 |
| grep -v '^[A-S][a-t]* time: ' > tmpfs |
| 345 |
|
|
outp="$INDIR/$pdir/summary.txt" |
| 346 |
|
|
sed -n "5,$ p" $outp | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' \ |
| 347 |
jmc |
1.4 |
| sed 's/ OPTFILE=.*\// OPTFILE=/g' \ |
| 348 |
jmc |
1.1 |
| grep -v '^[A-S][a-t]* time: ' > tmpfp |
| 349 |
jmc |
1.11 |
#-- re-order list of exp (according to local "sort" order) |
| 350 |
jmc |
1.19 |
listD=`grep '^[YN] [YN] [YN] [YN]' tmpfs | awk '{print $NF}' | sort` |
| 351 |
jmc |
1.11 |
for xx in $listD |
| 352 |
|
|
do |
| 353 |
|
|
sed "/ $xx\$/d" tmpfs > tmpfn |
| 354 |
|
|
sed -n "/ $xx\$/p" tmpfs >> tmpfn |
| 355 |
|
|
mv tmpfn tmpfs |
| 356 |
|
|
done |
| 357 |
jmc |
1.19 |
listD=`grep '^[YN] [YN] [YN] [YN]' tmpfp | awk '{print $NF}' | sort` |
| 358 |
jmc |
1.11 |
for xx in $listD |
| 359 |
|
|
do |
| 360 |
|
|
sed "/ $xx\$/d" tmpfp > tmpfn |
| 361 |
|
|
sed -n "/ $xx\$/p" tmpfp >> tmpfn |
| 362 |
|
|
mv tmpfn tmpfp |
| 363 |
|
|
done |
| 364 |
jmc |
1.1 |
echo -n "=== diff $sdir $pdir :" | tee -a $OUTPFIL |
| 365 |
|
|
diff tmpfs tmpfp > tmpdf |
| 366 |
|
|
yy=$? |
| 367 |
|
|
if test $yy != '0' ; then |
| 368 |
jmc |
1.17 |
echo " $type , of='$optf'" | tee -a $OUTPFIL |
| 369 |
jmc |
1.1 |
#grep '^run: ' $outp |
| 370 |
|
|
#grep '^run: ' $outs |
| 371 |
|
|
#-- score for each test: |
| 372 |
|
|
grep '^[YN] [YN] [YN] [YN]' tmpfs > tmploc 2>/dev/null |
| 373 |
|
|
t_tot=`cat tmploc | wc -l | sed -e 's| ||g'` |
| 374 |
|
|
t_pass=`grep '^Y Y Y Y' tmploc | grep 'pass ' | wc -l | sed -e 's| ||g'` |
| 375 |
|
|
score_s=`printf '%2i' $t_pass`":$t_tot" |
| 376 |
|
|
grep '^[YN] [YN] [YN] [YN]' tmpfp > tmploc 2>/dev/null |
| 377 |
|
|
t_tot=`cat tmploc | wc -l | sed -e 's| ||g'` |
| 378 |
|
|
t_pass=`grep '^Y Y Y Y' tmploc | grep 'pass ' | wc -l | sed -e 's| ||g'` |
| 379 |
|
|
score_p=`printf '%2i' $t_pass`":$t_tot" |
| 380 |
|
|
rm -f tmploc |
| 381 |
|
|
#-- count Nb of different lines |
| 382 |
|
|
ndf=`wc -l tmpdf | awk '{print $1}'` |
| 383 |
|
|
ndf=`expr $ndf / 2` |
| 384 |
|
|
nn=`grep -c '^---' tmpdf` |
| 385 |
|
|
ndf=`expr $ndf - $nn` |
| 386 |
|
|
if [ $ndf -le $NBLDIFF ] ; then |
| 387 |
|
|
cat tmpdf |
| 388 |
|
|
else |
| 389 |
|
|
echo " $ndf lines differ ( $score_s , $score_p )" |
| 390 |
|
|
fi |
| 391 |
|
|
echo "< "`head -1 $outs`" ( $score_s )" >> $OUTPFIL |
| 392 |
|
|
echo "> "`head -1 $outp`" ( $score_p )" >> $OUTPFIL |
| 393 |
|
|
cat tmpdf >> $OUTPFIL |
| 394 |
|
|
if [ $cdif -eq 0 ] ; then |
| 395 |
|
|
clin=`printf '%3i (%5s,%5s)' $ndf $score_s $score_p` |
| 396 |
|
|
else |
| 397 |
|
|
clin="$clin,"`printf '%3i (%5s,%5s)' $ndf $score_s $score_p` |
| 398 |
|
|
fi |
| 399 |
|
|
cdif=`expr $cdif + 1` |
| 400 |
|
|
echo '----------------------------------------' | tee -a $OUTPFIL |
| 401 |
|
|
else |
| 402 |
jmc |
1.18 |
echo " $type , of='$optf'" | tee -a $OUTPFIL |
| 403 |
jmc |
1.1 |
fi |
| 404 |
|
|
rm -f tmpfs tmpfp tmpdf |
| 405 |
|
|
fi |
| 406 |
|
|
done |
| 407 |
|
|
if [ $cmis -gt 0 ] ; then tmis='(-'$cmis')' ; else tmis='(--)' ; fi |
| 408 |
|
|
printf '%11s : %3i %4s %3i ' $mname $ctot $tmis $cdif >> $OUTPSUM |
| 409 |
|
|
if [ $cdif -gt 0 ] ; then |
| 410 |
|
|
echo " $clin" >> $OUTPSUM |
| 411 |
|
|
else echo "" >> $OUTPSUM ; fi |
| 412 |
|
|
fi |
| 413 |
|
|
|
| 414 |
|
|
done |
| 415 |
|
|
|
| 416 |
|
|
echo "Start time: $sTime" | tee -a $OUTPFIL |
| 417 |
|
|
echo "End time: "`date` | tee -a $OUTPFIL | tee -a $OUTPSUM |
| 418 |
|
|
|
| 419 |
|
|
rm -f ./dir_all ./slist ./plist |
| 420 |
|
|
if test $OUTPFIL = "TTT.$$" ; then rm -f $OUTPFIL ; fi |
| 421 |
|
|
if test "x$ADDRESS" != 'xnone' ; then |
| 422 |
|
|
echo ".. send $OUTPSUM to $ADDRESS" |
| 423 |
|
|
mail -s $OUTPSUM $ADDRESS < $OUTPSUM |
| 424 |
|
|
fi |
| 425 |
|
|
echo ".. cat $OUTPSUM" |
| 426 |
|
|
cat $OUTPSUM |
| 427 |
jmc |
1.5 |
exit 0 |
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