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% $Name$ |
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\chapter{Physical Parameterization and Packages} |
\chapter{Physical Parameterizations - Packages I} |
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\begin{rawhtml} |
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<!-- CMIREDIR:packages: --> |
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\end{rawhtml} |
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Within this chapter, the MITgcm ``packages'' are described. |
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Initially, ``packages'' were conceived to group source code files |
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together based upon their functionality. Each package was assigned a |
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separate subdirectory (within \texttt{pkg}) and, usually, contained |
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source code for implimenting different physical parametizations. This |
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was a convenient method for both segregating and rapidly including or |
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excluding parameterizations during the software build process. |
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Over time, package use has increased. The number of packages has |
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grown and they have evolved to contain much of the model functionality |
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including momentum schemes, I/O utilities, diagnostics, ``exchange'' |
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algorithms for domain decomposition, and numerous physical |
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parameterizations. The following sections describe how to use the |
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existing packages and how to modify them and create new ones. |
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%% In this chapter the schemes for parameterizing processes that are not |
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%% represented explicitly in MITgcm are described. Some of these |
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%% processes are sub-grid scale (SGS) phenomena, other processes, such as |
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%% open-boundaries, are external to the simulation. |
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% Overview |
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\newpage |
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\input{part6/packages.tex} |
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% Packages Related to Hydrodynamical Kernel |
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\newpage |
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\section{Packages Related to Hydrodynamical Kernel} |
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\input{part6/generic_advdiff.tex} |
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\newpage |
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\input{part6/zonal_filt.tex} |
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\newpage |
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\input{part6/exch2.tex} |
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\newpage |
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\input{part6/gridalt.tex} |
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% Some Mention of Packages that are part of the main model document |
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% Ocean Packages |
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\newpage |
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\section{Ocean Packages} |
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\input{part6/gmredi.tex} |
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In this chapter the schemes for parameterizing processes |
\newpage |
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that are not represented explicitly in MITgcm are described. |
\input{part6/kpp.tex} |
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Some of these processes are sub-grid scale (SGS) phenomena, |
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other processes, such as open-boundaries, are external to the |
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simulation. |
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\newpage |
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\input{part6/bulk_force.tex} |
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\input{part6/gmredi.tex} |
\newpage |
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\input{part6/exf.tex} |
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\input{part6/kpp.tex} |
\newpage |
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\input{part6/cal.tex} |
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\section{Atmosphere Packages} |
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\newpage |
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\input{part6/aim.tex} |
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\newpage |
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\input{part6/land.tex} |
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%% FIZHI is *** PRIVATE *** |
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%\begin{versionprivate} |
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\newpage |
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\input{part6/fizhi.tex} |
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%\end{versionprivate} |
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\section{Sea Ice Packages} |
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\newpage |
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\input{part6/thsice.tex} |
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\newpage |
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\input{part6/seaice.tex} |
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\section{Packages Related to Coupled Model} |
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\newpage |
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\input{part6/aim_compon_interf.tex} |
\input{part6/aim_compon_interf.tex} |
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\newpage |
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\input{part6/aim_ocn_coupler.tex} |
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\newpage |
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\input{part6/component_communications.tex} |
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\section{Biogeochemistry Packages} |
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\newpage |
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\input{part6/gchem.tex} |
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\newpage |
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\input{part6/dic.tex} |
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