| 3 |
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| 4 |
\chapter{Physical Parameterization and Packages} |
\chapter{Physical Parameterization and Packages} |
| 5 |
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|
| 6 |
In this chapter the schemes for parameterizing processes |
Within this chapter, the MITgcm ``packages'' are described. |
| 7 |
that are not represented explicitly in MITgcm are described. |
Initially, ``packages'' were conceived to group source code files |
| 8 |
Some of these processes are sub-grid scale (SGS) phenomena, |
together based upon their functionality. Each package was assigned a |
| 9 |
other processes, such as open-boundaries, are external to the |
separate subdirectory (within \texttt{pkg}) and, usually, contained |
| 10 |
simulation. |
source code for implimenting different physical parametizations. This |
| 11 |
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was a convenient method for both segregating and rapidly including or |
| 12 |
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excluding parameterizations during the software build process. |
| 13 |
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| 14 |
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Over time, package use has increased. The number of packages has |
| 15 |
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grown and they have evolved to contain much of the model functionality |
| 16 |
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including momentum schemes, I/O utilities, diagnostics, ``exchange'' |
| 17 |
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algorithms for domain decomposition, and numerous physical |
| 18 |
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parameterizations. The following sections describe how to use the |
| 19 |
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existing packages and how to modify them and create new ones. |
| 20 |
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%% In this chapter the schemes for parameterizing processes that are not |
| 22 |
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%% represented explicitly in MITgcm are described. Some of these |
| 23 |
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%% processes are sub-grid scale (SGS) phenomena, other processes, such as |
| 24 |
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%% open-boundaries, are external to the simulation. |
| 25 |
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| 26 |
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\newpage |
| 27 |
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\input{part6/packages.tex} |
| 28 |
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|
| 29 |
\newpage |
\newpage |
| 30 |
\input{part6/gmredi.tex} |
\input{part6/gmredi.tex} |
| 31 |
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|
| 32 |
\newpage |
\newpage |
| 33 |
|
\input{part6/dic.tex} |
| 34 |
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|
| 35 |
|
\newpage |
| 36 |
\input{part6/kpp.tex} |
\input{part6/kpp.tex} |
| 37 |
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|
| 38 |
\newpage |
\newpage |
| 42 |
\input{part6/bulk_force.tex} |
\input{part6/bulk_force.tex} |
| 43 |
|
|
| 44 |
\newpage |
\newpage |
| 45 |
|
\input{part6/generic_advdiff.tex} |
| 46 |
|
|
| 47 |
|
\newpage |
| 48 |
\input{part6/aim.tex} |
\input{part6/aim.tex} |
| 49 |
|
|
| 50 |
\newpage |
\newpage |
| 61 |
|
|
| 62 |
\newpage |
\newpage |
| 63 |
\input{part6/mnc.tex} |
\input{part6/mnc.tex} |
| 64 |
|
|
| 65 |
|
\newpage |
| 66 |
\input{part6/mdsio.tex} |
\input{part6/mdsio.tex} |
| 67 |
|
|
| 68 |
\newpage |
\newpage |
| 71 |
\newpage |
\newpage |
| 72 |
\input{part6/exch2.tex} |
\input{part6/exch2.tex} |
| 73 |
|
|
| 74 |
|
%% FIZHI is *** PRIVATE *** |
| 75 |
|
\begin{versionprivate} |
| 76 |
|
\newpage |
| 77 |
|
\input{part6/fizhi.tex} |
| 78 |
|
\end{versionprivate} |
| 79 |
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|
| 80 |
\newpage |
\newpage |
| 81 |
\input{part6/fizhi.tex} |
\input{part6/diagnostics.tex} |
| 82 |
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|
| 83 |
\newpage |
\newpage |
| 84 |
\input{part6/rw.tex} |
\input{part6/rw.tex} |
| 85 |
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|
| 86 |
\newpage |
\newpage |
| 87 |
\input{part6/zonal_filt.tex} |
\input{part6/zonal_filt.tex} |
| 88 |
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|
| 89 |
|
\newpage |
| 90 |
|
\input{part6/gchem.tex} |
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