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edhill |
1.30 |
% $Header: /u/gcmpack/manual/part6/part6.tex,v 1.29 2004/08/30 19:25:41 edhill Exp $ |
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adcroft |
1.2 |
% $Name: $ |
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adcroft |
1.1 |
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\chapter{Physical Parameterization and Packages} |
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edhill |
1.30 |
\begin{rawhtml} |
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<!-- CMIREDIR:packages: --> |
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\end{rawhtml} |
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cnh |
1.4 |
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edhill |
1.25 |
Within this chapter, the MITgcm ``packages'' are described. |
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Initially, ``packages'' were conceived to group source code files |
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together based upon their functionality. Each package was assigned a |
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separate subdirectory (within \texttt{pkg}) and, usually, contained |
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source code for implimenting different physical parametizations. This |
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was a convenient method for both segregating and rapidly including or |
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excluding parameterizations during the software build process. |
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edhill |
1.26 |
Over time, package use has increased. The number of packages has |
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grown and they have evolved to contain much of the model functionality |
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edhill |
1.25 |
including momentum schemes, I/O utilities, diagnostics, ``exchange'' |
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edhill |
1.26 |
algorithms for domain decomposition, and numerous physical |
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parameterizations. The following sections describe how to use the |
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existing packages and how to modify them and create new ones. |
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edhill |
1.25 |
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%% In this chapter the schemes for parameterizing processes that are not |
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%% represented explicitly in MITgcm are described. Some of these |
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%% processes are sub-grid scale (SGS) phenomena, other processes, such as |
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%% open-boundaries, are external to the simulation. |
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\newpage |
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\input{part6/packages.tex} |
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cnh |
1.4 |
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edhill |
1.19 |
\newpage |
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\input{part6/gmredi.tex} |
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edhill |
1.27 |
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\newpage |
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\input{part6/dic.tex} |
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edhill |
1.19 |
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\newpage |
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\input{part6/kpp.tex} |
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\newpage |
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\input{part6/thsice.tex} |
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\newpage |
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edhill |
1.29 |
\input{part6/seaice.tex} |
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\newpage |
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edhill |
1.19 |
\input{part6/bulk_force.tex} |
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edhill |
1.24 |
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\newpage |
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\input{part6/generic_advdiff.tex} |
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jmc |
1.20 |
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\newpage |
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\input{part6/aim.tex} |
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edhill |
1.19 |
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\newpage |
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\input{part6/land.tex} |
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\newpage |
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\input{part6/aim_compon_interf.tex} |
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\newpage |
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\input{part6/aim_ocn_coupler.tex} |
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\newpage |
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\input{part6/component_communications.tex} |
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\newpage |
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\input{part6/mnc.tex} |
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edhill |
1.23 |
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\newpage |
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edhill |
1.19 |
\input{part6/mdsio.tex} |
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\newpage |
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\input{part6/monitor.tex} |
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\newpage |
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\input{part6/exch2.tex} |
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cnh |
1.15 |
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edhill |
1.28 |
%% FIZHI is *** PRIVATE *** |
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\begin{versionprivate} |
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\newpage |
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\input{part6/fizhi.tex} |
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\end{versionprivate} |
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molod |
1.21 |
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\newpage |
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\input{part6/diagnostics.tex} |
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cnh |
1.15 |
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edhill |
1.19 |
\newpage |
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\input{part6/rw.tex} |
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\newpage |
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\input{part6/zonal_filt.tex} |
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edhill |
1.22 |
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\newpage |
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\input{part6/gchem.tex} |
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