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Wed Feb 11 18:09:17 2004 UTC (21 years, 5 months ago) by edhill
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 o added some discussion of packages & genmake2

1 edhill 1.25 % $Header: /u/u3/gcmpack/manual/part6/part6.tex,v 1.24 2004/02/04 04:49:19 edhill Exp $
2 adcroft 1.2 % $Name: $
3 adcroft 1.1
4     \chapter{Physical Parameterization and Packages}
5 cnh 1.4
6 edhill 1.25 Within this chapter, the MITgcm ``packages'' are described.
7     Initially, ``packages'' were conceived to group source code files
8     together based upon their functionality. Each package was assigned a
9     separate subdirectory (within \texttt{pkg}) and, usually, contained
10     source code for implimenting different physical parametizations. This
11     was a convenient method for both segregating and rapidly including or
12     excluding parameterizations during the software build process.
13    
14     Over time, package use increased. The number of packages has grown
15     and they have evolved to contain much of the model functionality
16     including momentum schemes, I/O utilities, diagnostics, ``exchange''
17     algorithms, and numerous other processes that have no direct
18     connection to any specific physical parameterizations. The following
19     sections describe how to use the existing packages and how to modify
20     them or create new ones.
21    
22     %% In this chapter the schemes for parameterizing processes that are not
23     %% represented explicitly in MITgcm are described. Some of these
24     %% processes are sub-grid scale (SGS) phenomena, other processes, such as
25     %% open-boundaries, are external to the simulation.
26    
27     \newpage
28     \input{part6/packages.tex}
29 cnh 1.4
30 edhill 1.19 \newpage
31     \input{part6/gmredi.tex}
32    
33     \newpage
34     \input{part6/kpp.tex}
35    
36     \newpage
37     \input{part6/thsice.tex}
38    
39     \newpage
40     \input{part6/bulk_force.tex}
41 edhill 1.24
42     \newpage
43     \input{part6/generic_advdiff.tex}
44 jmc 1.20
45     \newpage
46     \input{part6/aim.tex}
47 edhill 1.19
48     \newpage
49     \input{part6/land.tex}
50    
51     \newpage
52     \input{part6/aim_compon_interf.tex}
53    
54     \newpage
55     \input{part6/aim_ocn_coupler.tex}
56    
57     \newpage
58     \input{part6/component_communications.tex}
59    
60     \newpage
61     \input{part6/mnc.tex}
62 edhill 1.23
63     \newpage
64 edhill 1.19 \input{part6/mdsio.tex}
65    
66     \newpage
67     \input{part6/monitor.tex}
68    
69     \newpage
70     \input{part6/exch2.tex}
71 cnh 1.15
72     \newpage
73 edhill 1.19 \input{part6/fizhi.tex}
74 molod 1.21
75     \newpage
76     \input{part6/diagnostics.tex}
77 cnh 1.15
78 edhill 1.19 \newpage
79     \input{part6/rw.tex}
80    
81     \newpage
82     \input{part6/zonal_filt.tex}
83 edhill 1.22
84     \newpage
85     \input{part6/gchem.tex}

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