49 |
\begin{itemize} |
\begin{itemize} |
50 |
\item The exch2 package is included when \file{genmake2} is run. The |
\item The exch2 package is included when \file{genmake2} is run. The |
51 |
easiest way to do this is to add the line \code{exch2} to the |
easiest way to do this is to add the line \code{exch2} to the |
52 |
\file{packages.conf} file -- see Section \ref{sect:buildingCode} |
\file{packages.conf} file -- see Section \ref{sec:buildingCode} |
53 |
\sectiontitle{Building the code} for general |
\sectiontitle{Building the code} for general |
54 |
details. |
details. |
55 |
|
|
81 |
and \ref{sec:exch2mpi} \sectiontitle{exch2, SIZE.h, and |
and \ref{sec:exch2mpi} \sectiontitle{exch2, SIZE.h, and |
82 |
Multiprocessing}; a more general background on the subject |
Multiprocessing}; a more general background on the subject |
83 |
relevant to MITgcm is presented in Section |
relevant to MITgcm is presented in Section |
84 |
\ref{sect:specifying_a_decomposition} |
\ref{sec:specifying_a_decomposition} |
85 |
\sectiontitle{Specifying a decomposition}. |
\sectiontitle{Specifying a decomposition}. |
86 |
\end{itemize} |
\end{itemize} |
87 |
|
|
199 |
|
|
200 |
Once the topology configuration files are created, the Fortran |
Once the topology configuration files are created, the Fortran |
201 |
\code{PARAMETER}s in \file{SIZE.h} must be configured to match. |
\code{PARAMETER}s in \file{SIZE.h} must be configured to match. |
202 |
Section \ref{sect:specifying_a_decomposition} \sectiontitle{Specifying |
Section \ref{sec:specifying_a_decomposition} \sectiontitle{Specifying |
203 |
a decomposition} provides a general description of domain |
a decomposition} provides a general description of domain |
204 |
decomposition within MITgcm and its relation to \file{SIZE.h}. The |
decomposition within MITgcm and its relation to \file{SIZE.h}. The |
205 |
current section specifies constraints that the exch2 package imposes |
current section specifies constraints that the exch2 package imposes |
512 |
|
|
513 |
Most of the subroutines particular to exch2 handle the exchanges |
Most of the subroutines particular to exch2 handle the exchanges |
514 |
themselves and are of the same format as those described in |
themselves and are of the same format as those described in |
515 |
\ref{sect:cube_sphere_communication} \sectiontitle{Cube sphere |
\ref{sec:cube_sphere_communication} \sectiontitle{Cube sphere |
516 |
communication}. Like the original routines, they are written as |
communication}. Like the original routines, they are written as |
517 |
templates which the local Makefile converts from \code{RX} into |
templates which the local Makefile converts from \code{RX} into |
518 |
\code{RL} and \code{RS} forms. \\ |
\code{RL} and \code{RS} forms. \\ |
543 |
|
|
544 |
\begin{itemize} |
\begin{itemize} |
545 |
\item{Held Suarez tutorial, in tutorial\_held\_suarez\_cs verification directory, |
\item{Held Suarez tutorial, in tutorial\_held\_suarez\_cs verification directory, |
546 |
described in section \ref{sect:eg-hs} } |
described in section \ref{sec:eg-hs} } |
547 |
\end{itemize} |
\end{itemize} |