| 49 |
\begin{itemize} |
\begin{itemize} |
| 50 |
\item The exch2 package is included when \file{genmake2} is run. The |
\item The exch2 package is included when \file{genmake2} is run. The |
| 51 |
easiest way to do this is to add the line \code{exch2} to the |
easiest way to do this is to add the line \code{exch2} to the |
| 52 |
\file{packages.conf} file -- see Section \ref{sect:buildingCode} |
\file{packages.conf} file -- see Section \ref{sec:buildingCode} |
| 53 |
\sectiontitle{Building the code} for general |
\sectiontitle{Building the code} for general |
| 54 |
details. |
details. |
| 55 |
|
|
| 81 |
and \ref{sec:exch2mpi} \sectiontitle{exch2, SIZE.h, and |
and \ref{sec:exch2mpi} \sectiontitle{exch2, SIZE.h, and |
| 82 |
Multiprocessing}; a more general background on the subject |
Multiprocessing}; a more general background on the subject |
| 83 |
relevant to MITgcm is presented in Section |
relevant to MITgcm is presented in Section |
| 84 |
\ref{sect:specifying_a_decomposition} |
\ref{sec:specifying_a_decomposition} |
| 85 |
\sectiontitle{Specifying a decomposition}. |
\sectiontitle{Specifying a decomposition}. |
| 86 |
\end{itemize} |
\end{itemize} |
| 87 |
|
|
| 199 |
|
|
| 200 |
Once the topology configuration files are created, the Fortran |
Once the topology configuration files are created, the Fortran |
| 201 |
\code{PARAMETER}s in \file{SIZE.h} must be configured to match. |
\code{PARAMETER}s in \file{SIZE.h} must be configured to match. |
| 202 |
Section \ref{sect:specifying_a_decomposition} \sectiontitle{Specifying |
Section \ref{sec:specifying_a_decomposition} \sectiontitle{Specifying |
| 203 |
a decomposition} provides a general description of domain |
a decomposition} provides a general description of domain |
| 204 |
decomposition within MITgcm and its relation to \file{SIZE.h}. The |
decomposition within MITgcm and its relation to \file{SIZE.h}. The |
| 205 |
current section specifies constraints that the exch2 package imposes |
current section specifies constraints that the exch2 package imposes |
| 512 |
|
|
| 513 |
Most of the subroutines particular to exch2 handle the exchanges |
Most of the subroutines particular to exch2 handle the exchanges |
| 514 |
themselves and are of the same format as those described in |
themselves and are of the same format as those described in |
| 515 |
\ref{sect:cube_sphere_communication} \sectiontitle{Cube sphere |
\ref{sec:cube_sphere_communication} \sectiontitle{Cube sphere |
| 516 |
communication}. Like the original routines, they are written as |
communication}. Like the original routines, they are written as |
| 517 |
templates which the local Makefile converts from \code{RX} into |
templates which the local Makefile converts from \code{RX} into |
| 518 |
\code{RL} and \code{RS} forms. \\ |
\code{RL} and \code{RS} forms. \\ |
| 543 |
|
|
| 544 |
\begin{itemize} |
\begin{itemize} |
| 545 |
\item{Held Suarez tutorial, in tutorial\_held\_suarez\_cs verification directory, |
\item{Held Suarez tutorial, in tutorial\_held\_suarez\_cs verification directory, |
| 546 |
described in section \ref{sect:eg-hs} } |
described in section \ref{sec:eg-hs} } |
| 547 |
\end{itemize} |
\end{itemize} |