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edhill |
1.2 |
\section{Monitor: Simulation state monitoring toolkit} |
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molod |
1.1 |
\label{sec:pkg:monitor} |
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\begin{rawhtml} |
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<!-- CMIREDIR:package_monitor: --> |
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\end{rawhtml} |
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edhill |
1.3 |
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edhill |
1.4 |
\subsection{Introduction} |
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edhill |
1.3 |
\label{sec:pkg:monitor:overview} |
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The \texttt{monitor} package is primarily intended as a convenient |
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method for calculating and writing the following statistics: |
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\begin{center} |
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minimum, maximum, mean, and standard deviation |
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\end{center} |
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for spatially distributed fields. By default, \texttt{monitor} output |
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is sent to the ``standard output'' channel where it appears as ASCII |
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text containing a \texttt{\%MON} string such as this example: |
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\begin{verbatim} |
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(PID.TID 0000.0001) %MON time_tsnumber = 3 |
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(PID.TID 0000.0001) %MON time_secondsf = 3.6000000000000E+03 |
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(PID.TID 0000.0001) %MON dynstat_eta_max = 1.0025466645951E-03 |
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(PID.TID 0000.0001) %MON dynstat_eta_min = -1.0008899950901E-03 |
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(PID.TID 0000.0001) %MON dynstat_eta_mean = 2.1037438449350E-14 |
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(PID.TID 0000.0001) %MON dynstat_eta_sd = 5.0985228723396E-04 |
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(PID.TID 0000.0001) %MON dynstat_eta_del2 = 3.5216706549525E-07 |
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(PID.TID 0000.0001) %MON dynstat_uvel_max = 3.7594045977254E-05 |
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(PID.TID 0000.0001) %MON dynstat_uvel_min = -2.8264287531564E-05 |
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(PID.TID 0000.0001) %MON dynstat_uvel_mean = 9.1369201945671E-06 |
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(PID.TID 0000.0001) %MON dynstat_uvel_sd = 1.6868439193567E-05 |
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(PID.TID 0000.0001) %MON dynstat_uvel_del2 = 8.4315445301916E-08 |
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\end{verbatim} |
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The \texttt{monitor} text can be readily parsed by the |
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\texttt{testreport} script to determine, somewhat crudely but quickly, |
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how similar the output from two experiments are when run on different |
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platforms or before/after code changes. |
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The \texttt{monitor} output can also be useful for quickly diagnosing |
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practical problems such as CFL limitations, model progress (through |
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iteration counts), and behavior within some packages that use it. |
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\subsection{Using Monitor} |
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\label{sec:pkg:monitor:using} |
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As with most packages, \texttt{monitor} can be turned on or off at |
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compile and/or run times using the \texttt{packages.conf} and |
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\texttt{data.pkg} files. |
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The monitor output can be sent to the standard output channel, to an |
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\texttt{mnc}--generated file, or to both simultaneously. For |
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\texttt{mnc} output, the flag: |
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\begin{verbatim} |
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monitor_mnc=.TRUE., |
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\end{verbatim} |
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should be set within the \texttt{data.mnc} file. For output to both |
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ASCII and \texttt{mnc}, the flag |
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\begin{verbatim} |
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outputTypesInclusive=.TRUE., |
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\end{verbatim} |
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should be set within the \texttt{PARM03} section of the main |
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\texttt{data} file. It should be noted that the |
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\texttt{outputTypesInclusive} flag will make \textbf{ALL} kinds of |
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output (that is, everything written by \texttt{mdsio}, \texttt{mnc}, |
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and \texttt{monitor}) simultaneously active so it should be used only |
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with caution--and perhaps only for debugging purposes. |
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