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Revision 1.3 - (show annotations) (download) (as text)
Thu Aug 6 18:12:12 2009 UTC (15 years, 11 months ago) by jmc
Branch: MAIN
CVS Tags: checkpoint01, HEAD
Changes since 1.2: +2 -2 lines
File MIME type: application/x-tex
fix bottom-drag coeff units

1 \newpage
2
3 \begin{table}
4 %\hspace*{-1.5in}
5 \begin{tabular}{lllc}
6
7 \textbf{Name} & \textbf{value}
8 & \textbf{Description} & \textbf{Reference} \\
9 & & & \\
10
11 buoyancyRelation &
12 & buoyancyRelation = OCEANIC
13 & %---ref---
14 \\
15 fluidIsAir & F
16 & fluid major constituent is Air
17 & %---ref---
18 \\
19 fluidIsWater & T
20 & fuild major constituent is Water
21 & %---ref---
22 \\
23 usingPCoords & F
24 & use p (or p
25 & %---ref---
26 \\
27 usingZCoords & T
28 & use z (or z
29 & %---ref---
30 \\
31 tRef & 2.0E+01 at K= top
32 & Reference temperature profile ( oC or K )
33 & %---ref---
34 \\
35 sRef & 3.0E+01 at K= top
36 & Reference salinity profile ( psu )
37 & %---ref---
38 \\
39 viscAh & 0.0E+00
40 & Lateral eddy viscosity ( $m^2/s$ )
41 & %---ref---
42 \\
43 viscAhMax & 1.0E+21
44 & Maximum lateral eddy viscosity ( $m^2/s$ )
45 & %---ref---
46 \\
47 viscAhGrid & 0.0E+00
48 & Grid dependent lateral eddy viscosity ( non-dim. )
49 & %---ref---
50 \\
51 useFullLeith & F
52 & Use Full Form of Leith Viscosity on/off flag
53 & %---ref---
54 \\
55 useStrainTensionVisc & F
56 & Use StrainTension Form of Viscous Operator on/off flag
57 & %---ref---
58 \\
59 useAreaViscLength & F
60 & Use area for visc length instead of geom. mean
61 & %---ref---
62 \\
63 viscC2leith & 0.0E+00
64 & Leith harmonic visc. factor (on grad(vort),non-dim.)
65 & %---ref---
66 \\
67 viscC2leithD & 0.0E+00
68 & Leith harmonic viscosity factor (on grad(div),non-dim.)
69 & %---ref---
70 \\
71 viscC2smag & 0.0E+00
72 & Smagorinsky harmonic viscosity factor (non-dim.)
73 & %---ref---
74 \\
75 viscA4 & 0.0E+00
76 & Lateral biharmonic viscosity ( $m^4/s$ )
77 & %---ref---
78 \\
79 viscA4Max & 1.0E+21
80 & Maximum biharmonic viscosity ( $m^2/s$ )
81 & %---ref---
82 \\
83 viscA4Grid & 0.0E+00
84 & Grid dependent biharmonic viscosity ( non-dim. )
85 & %---ref---
86 \\
87 viscC4leith & 0.0E+00
88 & Leith biharm viscosity factor (on grad(vort), non-dim.)
89 & %---ref---
90 \\
91 viscC4leithD & 0.0E+00
92 & Leith biharm viscosity factor (on grad(div), non-dim.)
93 & %---ref---
94 \\
95 viscC4Smag & 0.0E+00
96 & Smagorinsky biharm viscosity factor (non-dim)
97 & %---ref---
98 \\
99 no\_slip\_sides & T
100 & Viscous BCs: No-slip sides
101 & %---ref---
102 \\
103 sideDragFactor & 2.0E+00
104 & side-drag scaling factor (non-dim)
105 & %---ref---
106 \\
107 viscAr & 0.0E+00
108 & Vertical eddy viscosity ( units of $r^2/s$ )
109 & %---ref---
110 \\
111 no\_slip\_bottom & T
112 & Viscous BCs: No-slip bottom
113 & %---ref---
114 \\
115 bottomDragLinear & 0.0E+00
116 & linear bottom-drag coefficient ( m/s )
117 & %---ref---
118 \\
119 bottomDragQuadratic & 0.0E+00
120 & quadratic bottom-drag coeff. ( 1 )
121 & %---ref---
122 \\
123 diffKhT & 0.0E+00
124 & Laplacian diffusion of heat laterally ( $m^2/s$ )
125 & %---ref---
126 \\
127 diffK4T & 0.0E+00
128 & Bihaarmonic diffusion of heat laterally ( $m^4/s$ )
129 & %---ref---
130 \\
131 diffKhS & 0.0E+00
132 & Laplacian diffusion of salt laterally ( $m^2/s$ )
133 & %---ref---
134 \\
135 diffK4S & 0.0E+00
136 & Bihaarmonic diffusion of salt laterally ( $m^4/s$ )
137 & %---ref---
138 \\
139 diffKrNrT & 0.0E+00 at K= top
140 & vertical profile of vertical diffusion of Temp ( $m^2/s$ )
141 & %---ref---
142 \\
143 diffKrNrS & 0.0E+00 at K= top
144 & vertical profile of vertical diffusion of Salt ( $m^2/s$ )
145 & %---ref---
146 \\
147 diffKrBL79surf & 0.0E+00
148 & Surface diffusion for Bryan and Lewis 1979 ( $m^2/s$ )
149 & %---ref---
150 \\
151 diffKrBL79deep & 0.0E+00
152 & Deep diffusion for Bryan and Lewis 1979 ( $m^2/s$ )
153 & %---ref---
154 \\
155 diffKrBL79scl & 2.0E+02
156 & Depth scale for Bryan and Lewis 1979 ( m )
157 & %---ref---
158 \\
159 diffKrBL79Ho & -2.0E+03
160 & Turning depth for Bryan and Lewis 1979 ( m )
161 & %---ref---
162 \\
163 eosType & LINEAR
164 & Equation of State
165 & %---ref---
166 \\
167 tAlpha & 2.0E-04
168 & Linear EOS thermal expansion coefficient ( 1/oC )
169 & %---ref---
170 \\
171 \end{tabular}
172 \end{table}
173
174 \newpage
175 \begin{table}
176 %\hspace*{-1.5in}
177 \begin{tabular}{lllc}
178
179 \textbf{Name} & \textbf{value}
180 & \textbf{Description} & \textbf{Reference} \\
181 & & & \\
182 sBeta & 7.4E-04
183 & Linear EOS haline contraction coef ( 1/psu )
184 & %---ref---
185 \\
186 rhonil & 9.998E+02
187 & Reference density ( $kg/m^3$ )
188 & %---ref---
189 \\
190 rhoConst & 9.998E+02
191 & Reference density ( $kg/m^3$ )
192 & %---ref---
193 \\
194 rhoConstFresh & 9.998E+02
195 & Reference density ( $kg/m^3$ )
196 & %---ref---
197 \\
198 gravity & 9.81E+00
199 & Gravitational acceleration ( $m/s^2$ )
200 & %---ref---
201 \\
202 gBaro & 9.81E+00
203 & Barotropic gravity ( $m/s^2$ )
204 & %---ref---
205 \\
206 rotationPeriod & 8.6164E+04
207 & Rotation Period ( s )
208 & %---ref---
209 \\
210 omega & 7.292123516990375E-05
211 & Angular velocity ( rad/s )
212 & %---ref---
213 \\
214 f0 & 1.0E-04
215 & Reference coriolis parameter ( 1/s )
216 & %---ref---
217 \\
218 beta & 9.999999999999999E-12
219 & Beta ( 1/(m.s) )
220 & %---ref---
221 \\
222 freeSurfFac & 1.0E+00
223 & Implicit free surface factor
224 & %---ref---
225 \\
226 implicitFreeSurface & T
227 & Implicit free surface on/off flag
228 & %---ref---
229 \\
230 rigidLid & F
231 & Rigid lid on/off flag
232 & %---ref---
233 \\
234 implicSurfPress & 1.0E+00
235 & Surface Pressure implicit factor (0-1)
236 & %---ref---
237 \\
238 implicDiv2Dflow & 1.0E+00
239 & Barot. Flow Div. implicit factor (0-1)
240 & %---ref---
241 \\
242 exactConserv & F
243 & Exact Volume Conservation on/off flag
244 & %---ref---
245 \\
246 uniformLin\_PhiSurf & T
247 & use uniform Bo\_surf on/off flag
248 & %---ref---
249 \\
250 nonlinFreeSurf & 0
251 & Non-linear Free Surf. options (-1,0,1,2,3)
252 & %---ref---
253 \\
254 hFacInf & 2.0E-01
255 & lower threshold for hFac (nonlinFreeSurf only)
256 & %---ref---
257 \\
258 hFacSup & 2.0E+00
259 & upper threshold for hFac (nonlinFreeSurf only)
260 & %---ref---
261 \\
262 select\_rStar & 0
263 & r
264 & %---ref---
265 \\
266 useRealFreshWaterFlux & F
267 & Real Fresh Water Flux on/off flag
268 & %---ref---
269 \\
270 convertFW2Salt & 3.5E+01
271 & convert F.W. Flux to Salt Flux (-1=use local S)
272 & %---ref---
273 \\
274 use3Dsolver & F
275 & use 3-D pressure solver on/off flag
276 & %---ref---
277 \\
278 nonHydrostatic & F
279 & Non-Hydrostatic on/off flag
280 & %---ref---
281 \\
282 nh\_Am2 & 1.0E+00
283 & Non-Hydrostatic terms scaling factor
284 & %---ref---
285 \\
286 quasiHydrostatic & F
287 & Quasi-Hydrostatic on/off flag
288 & %---ref---
289 \\
290 momStepping & T
291 & Momentum equation on/off flag
292 & %---ref---
293 \\
294 vectorInvariantMomentum & F
295 & Vector-Invariant Momentum on/off
296 & %---ref---
297 \\
298 momAdvection & T
299 & Momentum advection on/off flag
300 & %---ref---
301 \\
302 momViscosity & T
303 & Momentum viscosity on/off flag
304 & %---ref---
305 \\
306 momImplVertAdv & F
307 & Momentum implicit vert. advection on/off
308 & %---ref---
309 \\
310 implicitViscosity & F
311 & Implicit viscosity on/off flag
312 & %---ref---
313 \\
314 metricTerms & F
315 & metric-Terms on/off flag
316 & %---ref---
317 \\
318 useNHMTerms & F
319 & Non-Hydrostatic Metric-Terms on/off
320 & %---ref---
321 \\
322 useCoriolis & T
323 & Coriolis on/off flag
324 & %---ref---
325 \\
326 useCDscheme & F
327 & CD scheme on/off flag
328 & %---ref---
329 \\
330 useJamartWetPoints & F
331 & Coriolis WetPoints method flag
332 & %---ref---
333 \\
334 useJamartMomAdv & F
335 & V.I. Non-linear terms Jamart flag
336 & %---ref---
337 \\
338 \end{tabular}
339 \end{table}
340
341 \newpage
342 \begin{table}
343 %\hspace*{-1.5in}
344 \begin{tabular}{lllc}
345
346 \textbf{Name} & \textbf{value}
347 & \textbf{Description} & \textbf{Reference} \\
348 & & & \\
349 SadournyCoriolis & F
350 & Sadourny Coriolis discr. flag
351 & %---ref---
352 \\
353 upwindVorticity & F
354 & Upwind bias vorticity flag
355 & %---ref---
356 \\
357 useAbsVorticity & F
358 & Work with f
359 & %---ref---
360 \\
361 highOrderVorticity & F
362 & High order interp. of vort. flag
363 & %---ref---
364 \\
365 upwindShear & F
366 & Upwind vertical Shear advection flag
367 & %---ref---
368 \\
369 selectKEscheme & 0
370 & Kinetic Energy scheme selector
371 & %---ref---
372 \\
373 momForcing & T
374 & Momentum forcing on/off flag
375 & %---ref---
376 \\
377 momPressureForcing & T
378 & Momentum pressure term on/off flag
379 & %---ref---
380 \\
381 implicitIntGravWave & F
382 & Implicit Internal Gravity Wave flag
383 & %---ref---
384 \\
385 staggerTimeStep & F
386 & Stagger time stepping on/off flag
387 & %---ref---
388 \\
389 multiDimAdvection & T
390 & enable/disable Multi-Dim Advection
391 & %---ref---
392 \\
393 useMultiDimAdvec & F
394 & Multi-Dim Advection is/is-not used
395 & %---ref---
396 \\
397 implicitDiffusion & F
398 & Implicit Diffusion on/off flag
399 & %---ref---
400 \\
401 tempStepping & T
402 & Temperature equation on/off flag
403 & %---ref---
404 \\
405 tempAdvection & T
406 & Temperature advection on/off flag
407 & %---ref---
408 \\
409 tempImplVertAdv & F
410 & Temp. implicit vert. advection on/off
411 & %---ref---
412 \\
413 tempForcing & T
414 & Temperature forcing on/off flag
415 & %---ref---
416 \\
417 saltStepping & T
418 & Salinity equation on/off flag
419 & %---ref---
420 \\
421 saltAdvection & T
422 & Salinity advection on/off flag
423 & %---ref---
424 \\
425 saltImplVertAdv & F
426 & Sali. implicit vert. advection on/off
427 & %---ref---
428 \\
429 saltForcing & T
430 & Salinity forcing on/off flag
431 & %---ref---
432 \\
433 readBinaryPrec & 32
434 & Precision used for reading binary files
435 & %---ref---
436 \\
437 writeBinaryPrec & 32
438 & Precision used for writing binary files
439 & %---ref---
440 \\
441 globalFiles & F
442 & write "global" (=not per tile) files
443 & %---ref---
444 \\
445 useSingleCpuIO & F
446 & only master MPI process does I/O
447 & %---ref---
448 \\
449 debugMode & F
450 & Debug Mode on/off flag
451 & %---ref---
452 \\
453 debLevA & 1
454 & 1rst level of debugging
455 & %---ref---
456 \\
457 debLevB & 2
458 & 2nd level of debugging
459 & %---ref---
460 \\
461 debugLevel & 1
462 & select debugging level
463 & %---ref---
464 \\
465 cg2dMaxIters & 150
466 & Upper limit on 2d con. grad iterations
467 & %---ref---
468 \\
469 cg2dChkResFreq & 1
470 & 2d con. grad convergence test frequency
471 & %---ref---
472 \\
473 cg2dTargetResidual & 1.0E-07
474 & 2d con. grad target residual
475 & %---ref---
476 \\
477 cg2dTargetResWunit & -1.0E+00
478 & CG2d target residual [W units]
479 & %---ref---
480 \\
481 cg2dPreCondFreq & 1
482 & Freq. for updating cg2d preconditioner
483 & %---ref---
484 \\
485 nIter0 & 0
486 & Run starting timestep number
487 & %---ref---
488 \\
489 nTimeSteps & 0
490 & Number of timesteps
491 & %---ref---
492 \\
493 deltatTmom & 6.0E+01
494 & Momentum equation timestep ( s )
495 & %---ref---
496 \\
497 deltaTfreesurf & 6.0E+01
498 & FreeSurface equation timestep ( s )
499 & %---ref---
500 \\
501 dTtracerLev & 6.0E+01 at K= top
502 & Tracer equation timestep ( s )
503 & %---ref---
504 \\
505 deltatTClock & 6.0E+01
506 & Model clock timestep ( s )
507 & %---ref---
508 \\
509 \end{tabular}
510 \end{table}
511
512 \newpage
513 \begin{table}
514 %\hspace*{-1.5in}
515 \begin{tabular}{lllc}
516
517 \textbf{Name} & \textbf{value}
518 & \textbf{Description} & \textbf{Reference} \\
519 & & & \\
520 cAdjFreq & 0.0E+00
521 & Convective adjustment interval ( s )
522 & %---ref---
523 \\
524 momForcingOutAB & 0
525 & =1: take Momentum Forcing out of Adams-Bash.
526 & %---ref---
527 \\
528 tracForcingOutAB & 0
529 & =1: take T,S,pTr Forcing out of Adams-Bash.
530 & %---ref---
531 \\
532 momDissip\_In\_AB & T
533 & put Dissipation Tendency in Adams-Bash.
534 & %---ref---
535 \\
536 doAB\_onGtGs & T
537 & apply AB on Tendencies (rather than on T,S)
538 & %---ref---
539 \\
540 abEps & 1.0E-02
541 & Adams-Bashforth-2 stabilizing weight
542 & %---ref---
543 \\
544 baseTime & 0.0E+00
545 & Model base time ( s ).
546 & %---ref---
547 \\
548 startTime & 0.0E+00
549 & Run start time ( s ).
550 & %---ref---
551 \\
552 endTime & 0.0E+00
553 & Integration ending time ( s ).
554 & %---ref---
555 \\
556 pChkPtFreq & 0.0E+00
557 & Permanent restart/checkpoint file interval ( s ).
558 & %---ref---
559 \\
560 chkPtFreq & 0.0E+00
561 & Rolling restart/checkpoint file interval ( s ).
562 & %---ref---
563 \\
564 pickup\_write\_mdsio & T
565 & Model IO flag.
566 & %---ref---
567 \\
568 pickup\_read\_mdsio & T
569 & Model IO flag.
570 & %---ref---
571 \\
572 pickup\_write\_immed & F
573 & Model IO flag.
574 & %---ref---
575 \\
576 dumpFreq & 0.0E+00
577 & Model state write out interval ( s ).
578 & %---ref---
579 \\
580 dumpInitAndLast & T
581 & write out Initial and Last iter. model state
582 & %---ref---
583 \\
584 snapshot\_mdsio & T
585 & Model IO flag.
586 & %---ref---
587 \\
588 monitorFreq & 6.0E+01
589 & Monitor output interval ( s ).
590 & %---ref---
591 \\
592 monitor\_stdio & T
593 & Model IO flag.
594 & %---ref---
595 \\
596 externForcingPeriod & 0.0E+00
597 & forcing period (s)
598 & %---ref---
599 \\
600 externForcingCycle & 0.0E+00
601 & period of the cyle (s).
602 & %---ref---
603 \\
604 tauThetaClimRelax & 0.0E+00
605 & relaxation time scale (s)
606 & %---ref---
607 \\
608 tauSaltClimRelax & 0.0E+00
609 & relaxation time scale (s)
610 & %---ref---
611 \\
612 latBandClimRelax & 3.703701E+05
613 & max. Lat. where relaxation
614 & %---ref---
615 \\
616 usingCartesianGrid & T
617 & Cartesian coordinates flag ( True / False )
618 & %---ref---
619 \\
620 usingSphericalPolarGrid & F
621 & Spherical coordinates flag ( True / False )
622 & %---ref---
623 \\
624 usingCylindricalGrid & F
625 & Spherical coordinates flag ( True / False )
626 & %---ref---
627 \\
628 Ro\_SeaLevel & 0.0E+00
629 & r(1) ( units of r )
630 & %---ref---
631 \\
632 rkSign & -1.0E+00
633 & index orientation relative to vertical coordinate
634 & %---ref---
635 \\
636 horiVertRatio & 1.0E+00
637 & Ratio on units : Horiz - Vertical
638 & %---ref---
639 \\
640 drC & 5.0E+03 at K=1
641 & C spacing ( units of r )
642 & %---ref---
643 \\
644 drF & 1.0E+04 at K= top
645 & W spacing ( units of r )
646 & %---ref---
647 \\
648 delX & 1.234567E+05 at I= east
649 & U spacing ( m - cartesian, degrees - spherical )
650 & %---ref---
651 \\
652 delY & 1.234567E+05 at J=1
653 & V spacing ( m - cartesian, degrees - spherical )
654 & %---ref---
655 \\
656 ygOrigin & 0.0E+00
657 & South edge Y-axis origin (cartesian: m, spherical: deg.)
658
659 & %---ref---
660 \\
661 xgOrigin & 0.0E+00
662 & West edge X-axis origin (cartesian: m, spherical: deg.)
663 & %---ref---
664 \\
665 rSphere & 6.37E+06
666 & Radius ( ignored - cartesian, m - spherical )
667 & %---ref---
668 \\
669 xcoord & 6.172835E+04 at I=1
670 & P-point X coord ( m - cartesian, degrees - spherical )
671 & %---ref---
672 \\
673 ycoord & 6.172835E+04 at J=1
674 & P-point Y coord ( m - cartesian, degrees - spherical )
675 & %---ref---
676 \\
677 rcoord & -5.0E+03 at K=1
678 & P-point R coordinate ( units of r )
679 & %---ref---
680 \\
681 rF & 0.0E+00 at K=1
682 & W-Interf. R coordinate ( units of r )
683 & %---ref---
684 \\
685 dBdrRef & 0.0E+00 at K= top
686 & Vertical gradient of reference boyancy [$(m/s/r)^2)$]
687 & %---ref---
688 \\
689 \end{tabular}
690 \end{table}
691
692 \newpage
693 \begin{table}
694 %\hspace*{-1.5in}
695 \begin{tabular}{lllc}
696
697 \textbf{Name} & \textbf{value}
698 & \textbf{Description} & \textbf{Reference} \\
699 & & & \\
700 dxF & 1.234567E+05 at K= top
701 & dxF(:,1,:,1) ( m - cartesian, degrees - spherical )
702 & %---ref---
703 \\
704 dyF & 1.234567E+05 at I= east
705 & dyF(:,1,:,1) ( m - cartesian, degrees - spherical )
706 & %---ref---
707 \\
708 dxG & 1.234567E+05 at I= east
709 & dxG(:,1,:,1) ( m - cartesian, degrees - spherical )
710 & %---ref---
711 \\
712 dyG & 1.234567E+05 at I= east
713 & dyG(:,1,:,1) ( m - cartesian, degrees - spherical )
714 & %---ref---
715 \\
716 dxC & 1.234567E+05 at I= east
717 & dxC(:,1,:,1) ( m - cartesian, degrees - spherical )
718 & %---ref---
719 \\
720 dyC & 1.234567E+05 at I= east
721 & dyC(:,1,:,1) ( m - cartesian, degrees - spherical )
722 & %---ref---
723 \\
724 dxV & 1.234567E+05 at I= east
725 & dxV(:,1,:,1) ( m - cartesian, degrees - spherical )
726 & %---ref---
727 \\
728 dyU & 1.234567E+05 at I= east
729 & dyU(:,1,:,1) ( m - cartesian, degrees - spherical )
730 & %---ref---
731 \\
732 rA & 1.524155677489E+10 at I= east
733 & rA(:,1,:,1) ( m - cartesian, degrees - spherical )
734 & %---ref---
735 \\
736 rAw & 1.524155677489E+10 at K= top
737 & rAw(:,1,:,1) ( m - cartesian, degrees - spherical )
738 & %---ref---
739 \\
740 rAs & 1.524155677489E+10 at K= top
741 & rAs(:,1,:,1) ( m - cartesian, degrees - spherical )
742 & %---ref---
743 \\
744
745 \end{tabular}
746 \end{table}
747
748 \begin{table}
749 %\hspace*{-1.5in}
750 \begin{tabular}{lllc}
751
752 \textbf{Name} & \textbf{Default value}
753 & \textbf{Description} & \textbf{Reference} \\
754 & & & \\
755
756 tempAdvScheme & 2
757 & Temp. Horiz.Advection scheme selector
758 & %---ref---
759 \\
760 tempVertAdvScheme & 2
761 & Temp. Vert. Advection scheme selector
762 & %---ref---
763 \\
764 tempMultiDimAdvec & F
765 & use Muti-Dim Advec method for Temp
766 & %---ref---
767 \\
768 tempAdamsBashforth & T
769 & use Adams-Bashforth time-stepping for Temp
770 & %---ref---
771 \\
772 saltAdvScheme & 2
773 & Salt. Horiz.advection scheme selector
774 & %---ref---
775 \\
776 saltVertAdvScheme & 2
777 & Salt. Vert. Advection scheme selector
778 & %---ref---
779 \\
780 saltMultiDimAdvec & F
781 & use Muti-Dim Advec method for Salt
782 & %---ref---
783 \\
784 saltAdamsBashforth & T
785 & use Adams-Bashforth time-stepping for Salt
786 & %---ref---
787 \\
788
789 \end{tabular}
790 \end{table}
791

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