--- manual/s_getstarted/text/getting_started.tex 2004/04/09 15:06:18 1.24 +++ manual/s_getstarted/text/getting_started.tex 2004/10/13 05:06:25 1.26 @@ -1,4 +1,4 @@ -% $Header: /home/ubuntu/mnt/e9_copy/manual/s_getstarted/text/getting_started.tex,v 1.24 2004/04/09 15:06:18 edhill Exp $ +% $Header: /home/ubuntu/mnt/e9_copy/manual/s_getstarted/text/getting_started.tex,v 1.26 2004/10/13 05:06:25 cnh Exp $ % $Name: $ %\section{Getting started} @@ -324,7 +324,7 @@ \end{itemize} -\section{Example experiments} +\section[MITgcm Example Experiments]{Example experiments} \label{sect:modelExamples} %% a set of twenty-four pre-configured numerical experiments @@ -484,7 +484,7 @@ Once you have chosen the example you want to run, you are ready to compile the code. -\section{Building the code} +\section[Building MITgcm]{Building the code} \label{sect:buildingCode} To compile the code, we use the {\em make} program. This uses a file @@ -932,9 +932,25 @@ \end{enumerate} +An example of the above process on the MITgcm cluster (``cg01'') using +the GNU g77 compiler and the mpich MPI library is: + +{\footnotesize \begin{verbatim} + % cd MITgcm/verification/exp5 + % mkdir build + % cd build + % ../../../tools/genmake2 -mpi -mods=../code \ + -of=../../../tools/build_options/linux_ia32_g77+mpi_cg01 + % make depend + % make + % cd ../input + % /usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/g77/bin/mpirun.ch_gm \ + -machinefile mf --gm-kill 5 -v -np 2 ../build/mitgcmuv +\end{verbatim} } + -\section{Running the model} +\section[Running MITgcm]{Running the model in prognostic mode} \label{sect:runModel} If compilation finished succesfuully (section \ref{sect:buildingCode}) @@ -1043,7 +1059,7 @@ >> for n=1:11; imagesc(eta(:,:,n)');axis ij;colorbar;pause(.5);end \end{verbatim} -\section{Doing it yourself: customizing the code} +\section[Customizing MITgcm]{Doing it yourself: customizing the code} When you are ready to run the model in the configuration you want, the easiest thing is to use and adapt the setup of the case studies