Diff of /manual/s_getstarted/text/getting_started.tex

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--- manual/s_getstarted/text/getting_started.tex	2004/10/14 19:11:47	1.29
+++ manual/s_getstarted/text/getting_started.tex	2004/10/16 03:40:13	1.30
@@ -1,4 +1,4 @@
-% $Header: /home/ubuntu/mnt/e9_copy/manual/s_getstarted/text/getting_started.tex,v 1.29 2004/10/14 19:11:47 edhill Exp $
+% $Header: /home/ubuntu/mnt/e9_copy/manual/s_getstarted/text/getting_started.tex,v 1.30 2004/10/16 03:40:13 edhill Exp $
 % $Name:  $
 
 %\section{Getting started}
@@ -15,8 +15,12 @@
 this section, we provide information on how to customize the code when
 you are ready to try implementing the configuration you have in mind.
 
+
 \section{Where to find information}
 \label{sect:whereToFindInfo}
+\begin{rawhtml}
+<!-- CMIREDIR:whereToFindInfo: -->
+\end{rawhtml}
 
 A web site is maintained for release 2 (``Pelican'') of MITgcm:
 \begin{rawhtml} <A href=http://mitgcm.org/pelican/ target="idontexist"> \end{rawhtml}
@@ -50,6 +54,9 @@
 
 \section{Obtaining the code}
 \label{sect:obtainingCode}
+\begin{rawhtml}
+<!-- CMIREDIR:obtainingCode: -->
+\end{rawhtml}
 
 MITgcm can be downloaded from our system by following
 the instructions below. As a courtesy we ask that you send e-mail to us at
@@ -256,6 +263,9 @@
 with. So please be sure you understand what you're doing.
 
 \section{Model and directory structure}
+\begin{rawhtml}
+<!-- CMIREDIR:directory_structure: -->
+\end{rawhtml}
 
 The ``numerical'' model is contained within a execution environment
 support wrapper. This wrapper is designed to provide a general
@@ -326,6 +336,9 @@
 
 \section[MITgcm Example Experiments]{Example experiments}
 \label{sect:modelExamples}
+\begin{rawhtml}
+<!-- CMIREDIR:modelExamples: -->
+\end{rawhtml}
 
 %% a set of twenty-four pre-configured numerical experiments
 
@@ -486,6 +499,9 @@
 
 \section[Building MITgcm]{Building the code}
 \label{sect:buildingCode}
+\begin{rawhtml}
+<!-- CMIREDIR:buildingCode: -->
+\end{rawhtml}
 
 To compile the code, we use the {\em make} program. This uses a file
 ({\em Makefile}) that allows us to pre-process source files, specify
@@ -567,6 +583,9 @@
 
 \section[Running MITgcm]{Running the model in prognostic mode}
 \label{sect:runModel}
+\begin{rawhtml}
+<!-- CMIREDIR:runModel: -->
+\end{rawhtml}
 
 If compilation finished succesfuully (section \ref{sect:buildingCode})
 then an executable called \texttt{mitgcmuv} will now exist in the