--- manual/s_examples/text/model_examples.tex	2010/08/27 18:21:43	1.22
+++ manual/s_examples/text/model_examples.tex	2010/08/30 23:09:20	1.23
@@ -1,8 +1,8 @@
-% $Header: /home/ubuntu/mnt/e9_copy/manual/s_examples/text/model_examples.tex,v 1.22 2010/08/27 18:21:43 jmc Exp $
+% $Header: /home/ubuntu/mnt/e9_copy/manual/s_examples/text/model_examples.tex,v 1.23 2010/08/30 23:09:20 jmc Exp $
 % $Name:  $
 
 \section[MITgcm Example Experiments]{Example experiments}
-\label{sect:modelExamples}
+\label{sec:modelExamples}
 \begin{rawhtml}
 <!-- CMIREDIR:modelExamples: -->
 \end{rawhtml}
@@ -13,8 +13,8 @@
 numerical experiments.  Some of these example experiments are tests of
 individual parts of the model code, but many are fully fledged
 numerical simulations. Full tutorials exist for a few of the examples,
-and are documented in sections \ref{sect:eg-baro} -
-\ref{sect:eg-tank}. The other examples follow the same general
+and are documented in sections \ref{sec:eg-baro} -
+\ref{sec:eg-tank}. The other examples follow the same general
 structure as the tutorial examples. However, they only include brief
 instructions in a text file called {\it README}.  The examples are
 located in subdirectories under the directory \texttt{verification}.
@@ -27,56 +27,56 @@
 \item \texttt{tutorial\_advection\_in\_gyre} - Test of various
   advection schemes in a single-layer double-gyre experiment.
   This experiment is described in detail in section
-  \ref{sect:eg-adv-gyre}.
+  \ref{sec:eg-adv-gyre}.
 
 \item \texttt{tutorial\_baroclinic\_gyre} - Four layer, ocean double
   gyre. This experiment is described in detail in section
-  \ref{sect:eg-fourlayer}.
+  \ref{sec:eg-fourlayer}.
 
 \item \texttt{tutorial\_barotropic\_gyre} - Single layer, ocean double
   gyre (barotropic with free-surface). 
-  This experiment is described in detail in section \ref{sect:eg-baro}.
+  This experiment is described in detail in section \ref{sec:eg-baro}.
 
 \item \texttt{tutorial\_cfc\_offline} - Offline form of the MITgcm to
   study advection of a passive tracer and CFCs.
-  This experiment is described in detail in section \ref{sect:eg-offline-cfc}.
+  This experiment is described in detail in section \ref{sec:eg-offline-cfc}.
 
 \item \texttt{tutorial\_deep\_convection} - Inhomogenously forced
   ocean convection in a doubly periodic box. This experiment is
-  described in detail in section \ref{sect:eg-bconv}.
+  described in detail in section \ref{sec:eg-bconv}.
 
 \item \texttt{tutorial\_global\_oce\_biogeo} - Ocean model coupled to
   the dissolved inorganic carbon biogeochemistry model. This
   experiment is described in detail in section
-  \ref{sect:eg-biogeochem_tutorial}.
+  \ref{sec:eg-biogeochem_tutorial}.
 
 \item \texttt{tutorial\_global\_oce\_in\_p} - Global ocean simulation in
   pressure coordinate (non-Boussinesq ocean model). Described in
-  detail in section \ref{sect:eg-globalpressure}.
+  detail in section \ref{sec:eg-globalpressure}.
 
 \item \texttt{tutorial\_global\_oce\_latlon} - 4x4 degree global ocean
   simulation with steady climatological forcing. This experiment is
-  described in detail in section \ref{sect:eg-global}.
+  described in detail in section \ref{sec:eg-global}.
 
 \item \texttt{tutorial\_global\_oce\_optim} - Global ocean state
   estimation at $4^\circ$ resolution.  This experiment is described in
-  detail in section \ref{sect:eg-global_state_estimate}.
+  detail in section \ref{sec:eg-global_state_estimate}.
 
 \item \texttt{tutorial\_held\_suarez\_cs} - 3D atmosphere dynamics
   using Held and Suarez (1994) forcing on cubed sphere grid.  This
-  experiment is described in detail in section \ref{sect:eg-hs}.
+  experiment is described in detail in section \ref{sec:eg-hs}.
   
 \item \texttt{tutorial\_offline} - Offline form of the MITgcm to study
   advection of a passive tracer.  This experiment is described in
-  detail in section \ref{sect:eg-offline}.
+  detail in section \ref{sec:eg-offline}.
 
 \item \texttt{tutorial\_plume\_on\_slope} - Gravity Plume on a
   continental slope.  This experiment is described in detail in
-  section \ref{sect:eg-gravityplume}.
+  section \ref{sec:eg-gravityplume}.
 
 \item \texttt{tutorial\_tracer\_adjsens} - Simple passive tracer
   experiment. Includes derivative calculation. This experiment is
-  described in detail in section \ref{sect:eg-simple-tracer-adjoint}.
+  described in detail in section \ref{sec:eg-simple-tracer-adjoint}.
 
 \item \texttt{adjustment.128x64x1} - Barotropic adjustment problem on
   latitude longitude grid with 128x64 grid points ($2.8^\circ$ resolution).
@@ -257,7 +257,7 @@
 
 \item \texttt{rotating\_tank} Rotating tank simulation in cylindrical
   coordinates.  This experiment is described in detail in section
-  \ref{sect:eg-tank}.
+  \ref{sec:eg-tank}.
 
 \item \texttt{seaice\_obcs} similar to "lab\_sea" ({\it input.salt\_plume/})
   experiment with only a fraction of the domain and open-boundary conditions