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\section{Example: 4$^\circ$ Global Climatological Ocean Simulation} |
\section[Global Ocean MITgcm Exmaple]{Global Ocean Simulation at $4^\circ$ Resolution} |
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\label{sec:eg-global} |
\label{www:tutorials} |
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\label{sect:eg-global} |
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\begin{rawhtml} |
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<!-- CMIREDIR:eg-global: --> |
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\bodytext{bgcolor="#FFFFFFFF"} |
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%{\large May 2001} |
%{\large May 2001} |
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%\end{center} |
%\end{center} |
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\subsection{Introduction} |
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This document describes the third example MITgcm experiment. The first |
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two examples illustrated how to configure the code for hydrostatic idealized |
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geophysical fluids simulations. This example illustrates the use of |
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the MITgcm for large scale ocean circulation simulation. |
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\subsection{Overview} |
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This example experiment demonstrates using the MITgcm to simulate |
This example experiment demonstrates using the MITgcm to simulate |
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the planetary ocean circulation. The simulation is configured |
the planetary ocean circulation. The simulation is configured |
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with realistic geography and bathymetry on a |
with realistic geography and bathymetry on a |
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$4^{\circ} \times 4^{\circ}$ spherical polar grid. |
$4^{\circ} \times 4^{\circ}$ spherical polar grid. |
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The files for this experiment are in the verification directory |
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under tutorial\_global\_oce\_latlon. |
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Twenty levels are used in the vertical, ranging in thickness |
Twenty levels are used in the vertical, ranging in thickness |
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from $50\,{\rm m}$ at the surface to $815\,{\rm m}$ at depth, |
from $50\,{\rm m}$ at the surface to $815\,{\rm m}$ at depth, |
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giving a maximum model depth of $6\,{\rm km}$. |
giving a maximum model depth of $6\,{\rm km}$. |
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can be integrated forward for thousands of years on a single |
can be integrated forward for thousands of years on a single |
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processor desktop computer. |
processor desktop computer. |
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\\ |
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\subsection{Overview} |
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\label{www:tutorials} |
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The model is forced with climatological wind stress data and surface |
The model is forced with climatological wind stress data and surface |
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flux data from DaSilva \cite{DaSilva94}. Climatological data |
flux data from DaSilva \cite{DaSilva94}. Climatological data |
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in the model surface layer. |
in the model surface layer. |
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\begin{eqnarray} |
\begin{eqnarray} |
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\label{EQ:global_forcing} |
\label{EQ:eg-global-global_forcing} |
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\label{EQ:global_forcing_fu} |
\label{EQ:eg-global-global_forcing_fu} |
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{\cal F}_{u} & = & \frac{\tau_{x}}{\rho_{0} \Delta z_{s}} |
{\cal F}_{u} & = & \frac{\tau_{x}}{\rho_{0} \Delta z_{s}} |
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\\ |
\\ |
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\label{EQ:global_forcing_fv} |
\label{EQ:eg-global-global_forcing_fv} |
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{\cal F}_{v} & = & \frac{\tau_{y}}{\rho_{0} \Delta z_{s}} |
{\cal F}_{v} & = & \frac{\tau_{y}}{\rho_{0} \Delta z_{s}} |
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\\ |
\\ |
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\label{EQ:global_forcing_ft} |
\label{EQ:eg-global-global_forcing_ft} |
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{\cal F}_{\theta} & = & - \lambda_{\theta} ( \theta - \theta^{\ast} ) |
{\cal F}_{\theta} & = & - \lambda_{\theta} ( \theta - \theta^{\ast} ) |
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- \frac{1}{C_{p} \rho_{0} \Delta z_{s}}{\cal Q} |
- \frac{1}{C_{p} \rho_{0} \Delta z_{s}}{\cal Q} |
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\\ |
\\ |
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\label{EQ:global_forcing_fs} |
\label{EQ:eg-global-global_forcing_fs} |
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{\cal F}_{s} & = & - \lambda_{s} ( S - S^{\ast} ) |
{\cal F}_{s} & = & - \lambda_{s} ( S - S^{\ast} ) |
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+ \frac{S_{0}}{\Delta z_{s}}({\cal E} - {\cal P} - {\cal R}) |
+ \frac{S_{0}}{\Delta z_{s}}({\cal E} - {\cal P} - {\cal R}) |
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\end{eqnarray} |
\end{eqnarray} |
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($\theta^{\ast}$ and $Q$) have units of $^{\circ}{\rm C}$ and ${\rm W}~{\rm m}^{-2}$ |
($\theta^{\ast}$ and $Q$) have units of $^{\circ}{\rm C}$ and ${\rm W}~{\rm m}^{-2}$ |
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respectively. The salinity forcing fields ($S^{\ast}$ and |
respectively. The salinity forcing fields ($S^{\ast}$ and |
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$\cal{E}-\cal{P}-\cal{R}$) have units of ${\rm ppt}$ and ${\rm m}~{\rm s}^{-1}$ |
$\cal{E}-\cal{P}-\cal{R}$) have units of ${\rm ppt}$ and ${\rm m}~{\rm s}^{-1}$ |
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respectively. |
respectively. The source files and procedures for ingesting this data into the |
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simulation are described in the experiment configuration discussion in section |
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\ref{SEC:eg-global-clim_ocn_examp_exp_config}. |
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Figures (\ref{FIG:sim_config_tclim}-\ref{FIG:sim_config_empmr}) show the |
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relaxation temperature ($\theta^{\ast}$) and salinity ($S^{\ast}$) fields, |
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the wind stress components ($\tau_x$ and $\tau_y$), the heat flux ($Q$) |
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and the net fresh water flux (${\cal E} - {\cal P} - {\cal R}$) used |
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in equations \ref{EQ:global_forcing_fu}-\ref{EQ:global_forcing_fs}. The figures |
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also indicate the lateral extent and coastline used in the experiment. |
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Figure ({\ref{FIG:model_bathymetry}) shows the depth contours of the model |
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domain. |
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\subsection{Discrete Numerical Configuration} |
\subsection{Discrete Numerical Configuration} |
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\label{www:tutorials} |
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The model is configured in hydrostatic form. The domain is discretised with |
The model is configured in hydrostatic form. The domain is discretised with |
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$x$ and $y$ are initialized according to |
$x$ and $y$ are initialized according to |
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\begin{eqnarray} |
\begin{eqnarray} |
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x=r\cos(\phi),~\Delta x & = &r\cos(\Delta \phi) \\ |
x=r\cos(\phi),~\Delta x & = &r\cos(\Delta \phi) \\ |
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y=r\lambda,~\Delta x &= &r\Delta \lambda |
y=r\lambda,~\Delta y &= &r\Delta \lambda |
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\end{eqnarray} |
\end{eqnarray} |
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Arctic polar regions are not |
Arctic polar regions are not |
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\Delta z_{18}=725\,{\rm m},\, |
\Delta z_{18}=725\,{\rm m},\, |
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\Delta z_{19}=775\,{\rm m},\, |
\Delta z_{19}=775\,{\rm m},\, |
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\Delta z_{20}=815\,{\rm m} |
\Delta z_{20}=815\,{\rm m} |
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$ (here the numeric subscript indicates the model level index number, ${\tt k}$). |
$ (here the numeric subscript indicates the model level index number, ${\tt k}$) to |
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give a total depth, $H$, of $-5450{\rm m}$. |
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The implicit free surface form of the pressure equation described in Marshall et. al |
The implicit free surface form of the pressure equation described in Marshall et. al |
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\cite{Marshall97a} is employed. A Laplacian operator, $\nabla^2$, provides viscous |
\cite{marshall:97a} is employed. A Laplacian operator, $\nabla^2$, provides viscous |
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dissipation. Thermal and haline diffusion is also represented by a Laplacian operator. |
dissipation. Thermal and haline diffusion is also represented by a Laplacian operator. |
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Wind-stress forcing is added to the momentum equations for both |
Wind-stress forcing is added to the momentum equations in (\ref{EQ:eg-global-model_equations}) |
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the zonal flow, $u$ and the meridional flow $v$, according to equations |
for both the zonal flow, $u$ and the meridional flow $v$, according to equations |
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(\ref{EQ:global_forcing_fu}) and (\ref{EQ:global_forcing_fv}). |
(\ref{EQ:eg-global-global_forcing_fu}) and (\ref{EQ:eg-global-global_forcing_fv}). |
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Thermodynamic forcing inputs are added to the equations for |
Thermodynamic forcing inputs are added to the equations |
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in (\ref{EQ:eg-global-model_equations}) for |
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potential temperature, $\theta$, and salinity, $S$, according to equations |
potential temperature, $\theta$, and salinity, $S$, according to equations |
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(\ref{EQ:global_forcing_ft}) and (\ref{EQ:global_forcing_fs}). |
(\ref{EQ:eg-global-global_forcing_ft}) and (\ref{EQ:eg-global-global_forcing_fs}). |
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This produces a set of equations solved in this configuration as follows: |
This produces a set of equations solved in this configuration as follows: |
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\begin{eqnarray} |
\begin{eqnarray} |
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\label{EQ:model_equations} |
\label{EQ:eg-global-model_equations} |
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\frac{Du}{Dt} - fv + |
\frac{Du}{Dt} - fv + |
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\frac{1}{\rho}\frac{\partial p^{'}}{\partial x} - |
\frac{1}{\rho}\frac{\partial p^{'}}{\partial x} - |
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\nabla_{h}\cdot A_{h}\nabla_{h}u - |
\nabla_{h}\cdot A_{h}\nabla_{h}u - |
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$v=\frac{Dy}{Dt}=r \frac{D \phi}{Dt}$ |
$v=\frac{Dy}{Dt}=r \frac{D \phi}{Dt}$ |
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are the zonal and meridional components of the |
are the zonal and meridional components of the |
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flow vector, $\vec{u}$, on the sphere. As described in |
flow vector, $\vec{u}$, on the sphere. As described in |
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MITgcm Numerical Solution Procedure \cite{MITgcm_Numerical_Scheme}, the time |
MITgcm Numerical Solution Procedure \ref{chap:discretization}, the time |
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evolution of potential temperature, $\theta$, equation is solved prognostically. |
evolution of potential temperature, $\theta$, equation is solved prognostically. |
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The total pressure, $p$, is diagnosed by summing pressure due to surface |
The total pressure, $p$, is diagnosed by summing pressure due to surface |
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elevation $\eta$ and the hydrostatic pressure. |
elevation $\eta$ and the hydrostatic pressure. |
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\\ |
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\subsubsection{Numerical Stability Criteria} |
\subsubsection{Numerical Stability Criteria} |
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\label{www:tutorials} |
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The Laplacian dissipation coefficient, $A_{h}$, is set to $5 \times 10^5 m s^{-1}$. |
The Laplacian dissipation coefficient, $A_{h}$, is set to $5 \times 10^5 m s^{-1}$. |
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This value is chosen to yield a Munk layer width \cite{Adcroft_thesis}, |
This value is chosen to yield a Munk layer width \cite{adcroft:95}, |
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\begin{eqnarray} |
\begin{eqnarray} |
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\label{EQ:munk_layer} |
\label{EQ:eg-global-munk_layer} |
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M_{w} = \pi ( \frac { A_{h} }{ \beta } )^{\frac{1}{3}} |
&& M_{w} = \pi ( \frac { A_{h} }{ \beta } )^{\frac{1}{3}} |
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\end{eqnarray} |
\end{eqnarray} |
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\noindent of $\approx 600$km. This is greater than the model |
\noindent of $\approx 600$km. This is greater than the model |
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\noindent The model is stepped forward with a |
\noindent The model is stepped forward with a |
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time step $\delta t_{\theta}=30~{\rm hours}$ for thermodynamic variables and |
time step $\delta t_{\theta}=30~{\rm hours}$ for thermodynamic variables and |
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$\delta t_{v}=40~{\rm minutes}$ for momentum terms. With this time step, the stability |
$\delta t_{v}=40~{\rm minutes}$ for momentum terms. With this time step, the stability |
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parameter to the horizontal Laplacian friction \cite{Adcroft_thesis} |
parameter to the horizontal Laplacian friction \cite{adcroft:95} |
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\begin{eqnarray} |
\begin{eqnarray} |
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\label{EQ:laplacian_stability} |
\label{EQ:eg-global-laplacian_stability} |
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S_{l} = 4 \frac{A_{h} \delta t_{v}}{{\Delta x}^2} |
&& S_{l} = 4 \frac{A_{h} \delta t_{v}}{{\Delta x}^2} |
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\end{eqnarray} |
\end{eqnarray} |
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\noindent evaluates to 0.16 at a latitude of $\phi=80^{\circ}$, which is below the |
\noindent evaluates to 0.16 at a latitude of $\phi=80^{\circ}$, which is below the |
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\noindent The vertical dissipation coefficient, $A_{z}$, is set to |
\noindent The vertical dissipation coefficient, $A_{z}$, is set to |
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$1\times10^{-3} {\rm m}^2{\rm s}^{-1}$. The associated stability limit |
$1\times10^{-3} {\rm m}^2{\rm s}^{-1}$. The associated stability limit |
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\begin{eqnarray} |
\begin{eqnarray} |
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\label{EQ:laplacian_stability_z} |
\label{EQ:eg-global-laplacian_stability_z} |
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S_{l} = 4 \frac{A_{z} \delta t_{v}}{{\Delta z}^2} |
S_{l} = 4 \frac{A_{z} \delta t_{v}}{{\Delta z}^2} |
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\end{eqnarray} |
\end{eqnarray} |
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related to $K_{h}$ will be at $\phi=80^{\circ}$ where $\Delta x \approx 77 {\rm km}$. |
related to $K_{h}$ will be at $\phi=80^{\circ}$ where $\Delta x \approx 77 {\rm km}$. |
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Here the stability parameter |
Here the stability parameter |
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\begin{eqnarray} |
\begin{eqnarray} |
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\label{EQ:laplacian_stability_xtheta} |
\label{EQ:eg-global-laplacian_stability_xtheta} |
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S_{l} = \frac{4 K_{h} \delta t_{\theta}}{{\Delta x}^2} |
S_{l} = \frac{4 K_{h} \delta t_{\theta}}{{\Delta x}^2} |
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\end{eqnarray} |
\end{eqnarray} |
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evaluates to $0.07$, well below the stability limit of $S_{l} \approx 0.5$. The |
evaluates to $0.07$, well below the stability limit of $S_{l} \approx 0.5$. The |
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stability parameter related to $K_{z}$ |
stability parameter related to $K_{z}$ |
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\begin{eqnarray} |
\begin{eqnarray} |
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\label{EQ:laplacian_stability_ztheta} |
\label{EQ:eg-global-laplacian_stability_ztheta} |
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S_{l} = \frac{4 K_{z} \delta t_{\theta}}{{\Delta z}^2} |
S_{l} = \frac{4 K_{z} \delta t_{\theta}}{{\Delta z}^2} |
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\end{eqnarray} |
\end{eqnarray} |
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evaluates to $0.005$ for $\min(\Delta z)=50{\rm m}$, well below the stability limit |
evaluates to $0.005$ for $\min(\Delta z)=50{\rm m}$, well below the stability limit |
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\\ |
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\noindent The numerical stability for inertial oscillations |
\noindent The numerical stability for inertial oscillations |
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\cite{Adcroft_thesis} |
\cite{adcroft:95} |
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\begin{eqnarray} |
\begin{eqnarray} |
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\label{EQ:inertial_stability} |
\label{EQ:eg-global-inertial_stability} |
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S_{i} = f^{2} {\delta t_v}^2 |
S_{i} = f^{2} {\delta t_v}^2 |
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\end{eqnarray} |
\end{eqnarray} |
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the $S_{i} < 1$ upper limit for stability. |
the $S_{i} < 1$ upper limit for stability. |
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\\ |
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\noindent The advective CFL \cite{Adcroft_thesis} for a extreme maximum |
\noindent The advective CFL \cite{adcroft:95} for a extreme maximum |
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horizontal flow |
horizontal flow |
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speed of $ | \vec{u} | = 2 ms^{-1}$ |
speed of $ | \vec{u} | = 2 ms^{-1}$ |
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\begin{eqnarray} |
\begin{eqnarray} |
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\label{EQ:cfl_stability} |
\label{EQ:eg-global-cfl_stability} |
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S_{a} = \frac{| \vec{u} | \delta t_{v}}{ \Delta x} |
S_{a} = \frac{| \vec{u} | \delta t_{v}}{ \Delta x} |
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\end{eqnarray} |
\end{eqnarray} |
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\noindent The stability parameter for internal gravity waves propagating |
\noindent The stability parameter for internal gravity waves propagating |
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with a maximum speed of $c_{g}=10~{\rm ms}^{-1}$ |
with a maximum speed of $c_{g}=10~{\rm ms}^{-1}$ |
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\cite{Adcroft_thesis} |
\cite{adcroft:95} |
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\begin{eqnarray} |
\begin{eqnarray} |
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\label{EQ:cfl_stability} |
\label{EQ:eg-global-gfl_stability} |
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S_{c} = \frac{c_{g} \delta t_{v}}{ \Delta x} |
S_{c} = \frac{c_{g} \delta t_{v}}{ \Delta x} |
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\end{eqnarray} |
\end{eqnarray} |
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stability limit of 0.5. |
stability limit of 0.5. |
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\subsection{Experiment Configuration} |
\subsection{Experiment Configuration} |
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\label{SEC:clim_ocn_examp_exp_config} |
\label{www:tutorials} |
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\label{SEC:eg-global-clim_ocn_examp_exp_config} |
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The model configuration for this experiment resides under the |
The model configuration for this experiment resides under the |
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directory {\it verification/exp2/}. The experiment files |
directory {\it tutorial\_examples/global\_ocean\_circulation/}. |
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The experiment files |
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\begin{itemize} |
\begin{itemize} |
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\item {\it input/data} |
\item {\it input/data} |
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\item {\it input/data.pkg} |
\item {\it input/data.pkg} |
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experiments. Below we describe the customizations |
experiments. Below we describe the customizations |
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to these files associated with this experiment. |
to these files associated with this experiment. |
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\subsubsection{Driving Datasets} |
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\label{www:tutorials} |
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Figures (\ref{FIG:sim_config_tclim}-\ref{FIG:sim_config_empmr}) show the |
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relaxation temperature ($\theta^{\ast}$) and salinity ($S^{\ast}$) fields, |
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the wind stress components ($\tau_x$ and $\tau_y$), the heat flux ($Q$) |
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and the net fresh water flux (${\cal E} - {\cal P} - {\cal R}$) used |
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in equations \ref{EQ:global_forcing_fu}-\ref{EQ:global_forcing_fs}. The figures |
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also indicate the lateral extent and coastline used in the experiment. |
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Figure ({\ref{FIG:model_bathymetry}) shows the depth contours of the model |
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domain. |
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\subsubsection{File {\it input/data}} |
\subsubsection{File {\it input/data}} |
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\label{www:tutorials} |
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This file, reproduced completely below, specifies the main parameters |
This file, reproduced completely below, specifies the main parameters |
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for the experiment. The parameters that are significant for this configuration |
for the experiment. The parameters that are significant for this configuration |
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\begin{verbatim} tRef= 16.0 , 15.2 , 14.5 , 13.9 , 13.3 , \end{verbatim} |
\begin{verbatim} tRef= 16.0 , 15.2 , 14.5 , 13.9 , 13.3 , \end{verbatim} |
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$\cdots$ \\ |
$\cdots$ \\ |
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set reference values for potential |
set reference values for potential |
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temperature and salinity at each model level in units of $^{\circ}$C and |
temperature and salinity at each model level in units of $^{\circ}\mathrm{C}$ and |
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${\rm ppt}$. The entries are ordered from surface to depth. |
${\rm ppt}$. The entries are ordered from surface to depth. |
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Density is calculated from anomalies at each level evaluated |
Density is calculated from anomalies at each level evaluated |
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with respect to the reference values set here.\\ |
with respect to the reference values set here.\\ |
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\fbox{ |
\fbox{ |
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\begin{minipage}{5.0in} |
\begin{minipage}{5.0in} |
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{\it S/R INI\_PARMS}({\it ini\_parms.F})\\ |
{\it S/R INI\_PARMS}({\it ini\_parms.F})\\ |
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{\it S/R CALC\_MOM\_RHS}({\it calc\_mom\_rhs.F}) |
{\it S/R MOM\_FLUXFORM}({\it mom\_fluxform.F}) |
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\end{minipage} |
\end{minipage} |
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} |
} |
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\end{small} |
\end{small} |
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\subsubsection{File {\it input/data.pkg}} |
\subsubsection{File {\it input/data.pkg}} |
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\label{www:tutorials} |
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This file uses standard default values and does not contain |
This file uses standard default values and does not contain |
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customisations for this experiment. |
customisations for this experiment. |
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\subsubsection{File {\it input/eedata}} |
\subsubsection{File {\it input/eedata}} |
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\label{www:tutorials} |
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This file uses standard default values and does not contain |
This file uses standard default values and does not contain |
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customisations for this experiment. |
customisations for this experiment. |
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\subsubsection{File {\it input/windx.sin\_y}} |
\subsubsection{File {\it input/windx.sin\_y}} |
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\label{www:tutorials} |
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The {\it input/windx.sin\_y} file specifies a two-dimensional ($x,y$) |
The {\it input/windx.sin\_y} file specifies a two-dimensional ($x,y$) |
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map of wind stress ,$\tau_{x}$, values. The units used are $Nm^{-2}$. |
map of wind stress ,$\tau_{x}$, values. The units used are $Nm^{-2}$. |
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code for creating the {\it input/windx.sin\_y} file. |
code for creating the {\it input/windx.sin\_y} file. |
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\subsubsection{File {\it input/topog.box}} |
\subsubsection{File {\it input/topog.box}} |
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\label{www:tutorials} |
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The {\it input/topog.box} file specifies a two-dimensional ($x,y$) |
The {\it input/topog.box} file specifies a two-dimensional ($x,y$) |
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code for creating the {\it input/topog.box} file. |
code for creating the {\it input/topog.box} file. |
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\subsubsection{File {\it code/SIZE.h}} |
\subsubsection{File {\it code/SIZE.h}} |
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\label{www:tutorials} |
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Two lines are customized in this file for the current experiment |
Two lines are customized in this file for the current experiment |
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\end{small} |
\end{small} |
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\subsubsection{File {\it code/CPP\_OPTIONS.h}} |
\subsubsection{File {\it code/CPP\_OPTIONS.h}} |
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\label{www:tutorials} |
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This file uses standard default values and does not contain |
This file uses standard default values and does not contain |
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customisations for this experiment. |
customisations for this experiment. |
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|
709 |
\subsubsection{File {\it code/CPP\_EEOPTIONS.h}} |
\subsubsection{File {\it code/CPP\_EEOPTIONS.h}} |
710 |
|
\label{www:tutorials} |
711 |
|
|
712 |
This file uses standard default values and does not contain |
This file uses standard default values and does not contain |
713 |
customisations for this experiment. |
customisations for this experiment. |
714 |
|
|
715 |
\subsubsection{Other Files } |
\subsubsection{Other Files } |
716 |
|
\label{www:tutorials} |
717 |
|
|
718 |
Other files relevant to this experiment are |
Other files relevant to this experiment are |
719 |
\begin{itemize} |
\begin{itemize} |