--- manual/s_examples/barotropic_gyre/baro.tex	2002/02/28 19:32:19	1.8
+++ manual/s_examples/barotropic_gyre/baro.tex	2006/06/27 19:08:22	1.14
@@ -1,4 +1,4 @@
-% $Header: /home/ubuntu/mnt/e9_copy/manual/s_examples/barotropic_gyre/baro.tex,v 1.8 2002/02/28 19:32:19 cnh Exp $
+% $Header: /home/ubuntu/mnt/e9_copy/manual/s_examples/barotropic_gyre/baro.tex,v 1.14 2006/06/27 19:08:22 molod Exp $
 % $Name:  $
 
 \bodytext{bgcolor="#FFFFFFFF"}
@@ -13,25 +13,18 @@
 %{\large May 2001}
 %\end{center}
 
-This is the first in a series of tutorials describing
-example MITgcm numerical experiments. The example experiments 
-include both straightforward examples of idealized geophysical 
-fluid simulations and more involved cases encompassing
-large scale modeling and
-automatic differentiation. Both hydrostatic and non-hydrostatic 
-experiments are presented, as well as experiments employing
-Cartesian, spherical-polar and cube-sphere coordinate systems.
-These ``case study'' documents include information describing
-the experimental configuration and detailed information on how to
-configure the MITgcm code and input files for each experiment.
-
-\section{Barotropic Ocean Gyre In Cartesian Coordinates}
+\section[Barotropic Gyre MITgcm Example]{Barotropic Ocean Gyre In Cartesian Coordinates}
 \label{sect:eg-baro}
+\label{www:tutorials}
+\begin{rawhtml}
+<!-- CMIREDIR:eg-baro: -->
+\end{rawhtml}
 
 
 This example experiment demonstrates using the MITgcm to simulate
-a Barotropic, wind-forced, ocean gyre circulation. The experiment 
-is a numerical rendition of the gyre circulation problem similar
+a Barotropic, wind-forced, ocean gyre circulation. The files for this
+experiment can be found in the verification directory tutorial\_barotropic\_gyre.
+The experiment is a numerical rendition of the gyre circulation problem similar
 to the problems described analytically by Stommel in 1966 
 \cite{Stommel66} and numerically in Holland et. al \cite{Holland75}.
 
@@ -67,12 +60,17 @@
 Figure \ref{FIG:eg-baro-simulation_config}
 summarizes the configuration simulated.
 
+%% === eh3 ===
 \begin{figure}
-\begin{center}
- \resizebox{7.5in}{5.5in}{
-   \includegraphics*[0.2in,0.7in][10.5in,10.5in]
-    {part3/case_studies/barotropic_gyre/simulation_config.eps} }
-\end{center}
+%% \begin{center}
+%%  \resizebox{7.5in}{5.5in}{
+%%    \includegraphics*[0.2in,0.7in][10.5in,10.5in]
+%%     {part3/case_studies/barotropic_gyre/simulation_config.eps} }
+%% \end{center}
+\centerline{
+  \scalefig{.95}
+  \epsfbox{part3/case_studies/barotropic_gyre/simulation_config.eps}
+}
 \caption{Schematic of simulation domain and wind-stress forcing function 
 for barotropic gyre numerical experiment. The domain is enclosed bu solid
 walls at $x=$~0,1200km and at $y=$~0,1200km.}
@@ -80,6 +78,7 @@
 \end{figure}
 
 \subsection{Equations Solved}
+\label{www:tutorials}
 The model is configured in hydrostatic form. The implicit free surface form of the
 pressure equation described in Marshall et. al \cite{marshall:97a} is
 employed.
@@ -114,6 +113,7 @@
 
 
 \subsection{Discrete Numerical Configuration}
+\label{www:tutorials}
 
  The domain is discretised with 
 a uniform grid spacing in the horizontal set to
@@ -122,6 +122,7 @@
 model is configured with a single layer with depth, $\Delta z$, of $5000$~m. 
 
 \subsubsection{Numerical Stability Criteria}
+\label{www:tutorials}
 
 The Laplacian dissipation coefficient, $A_{h}$, is set to $400 m s^{-1}$.
 This value is chosen to yield a Munk layer width \cite{adcroft:95},
@@ -175,6 +176,7 @@
 of 0.5 and limits $\delta t$ to $1200s$.
 
 \subsection{Code Configuration}
+\label{www:tutorials}
 \label{SEC:eg-baro-code_config}
 
 The model configuration for this experiment resides under the 
@@ -194,6 +196,7 @@
 to these files associated with this experiment.
 
 \subsubsection{File {\it input/data}}
+\label{www:tutorials}
 
 This file, reproduced completely below, specifies the main parameters 
 for the experiment. The parameters that are significant for this configuration
@@ -305,16 +308,19 @@
 \end{small}
 
 \subsubsection{File {\it input/data.pkg}}
+\label{www:tutorials}
 
 This file uses standard default values and does not contain
 customizations for this experiment.
 
 \subsubsection{File {\it input/eedata}}
+\label{www:tutorials}
 
 This file uses standard default values and does not contain
 customizations for this experiment.
 
 \subsubsection{File {\it input/windx.sin\_y}}
+\label{www:tutorials}
 
 The {\it input/windx.sin\_y} file specifies a two-dimensional ($x,y$) 
 map of wind stress ,$\tau_{x}$, values. The units used are $Nm^{-2}$.
@@ -325,6 +331,7 @@
 code for creating the {\it input/windx.sin\_y} file.
 
 \subsubsection{File {\it input/topog.box}}
+\label{www:tutorials}
 
 
 The {\it input/topog.box} file specifies a two-dimensional ($x,y$) 
@@ -336,6 +343,7 @@
 code for creating the {\it input/topog.box} file.
 
 \subsubsection{File {\it code/SIZE.h}}
+\label{www:tutorials}
 
 Two lines are customized in this file for the current experiment
 
@@ -358,12 +366,14 @@
 \end{small}
 
 \subsubsection{File {\it code/CPP\_OPTIONS.h}}
+\label{www:tutorials}
 
 This file uses standard default values and does not contain
 customizations for this experiment.
 
 
 \subsubsection{File {\it code/CPP\_EEOPTIONS.h}}
+\label{www:tutorials}
 
 This file uses standard default values and does not contain
 customizations for this experiment.