--- manual/s_examples/baroclinic_gyre/fourlayer.tex 2002/02/28 19:32:19 1.12 +++ manual/s_examples/baroclinic_gyre/fourlayer.tex 2002/05/16 15:54:37 1.13 @@ -1,7 +1,8 @@ -% $Header: /home/ubuntu/mnt/e9_copy/manual/s_examples/baroclinic_gyre/fourlayer.tex,v 1.12 2002/02/28 19:32:19 cnh Exp $ +% $Header: /home/ubuntu/mnt/e9_copy/manual/s_examples/baroclinic_gyre/fourlayer.tex,v 1.13 2002/05/16 15:54:37 adcroft Exp $ % $Name: $ \section{Four Layer Baroclinic Ocean Gyre In Spherical Coordinates} +\label{www:tutorials} \label{sect:eg-fourlayer} \bodytext{bgcolor="#FFFFFFFF"} @@ -26,6 +27,7 @@ for four layers and in a spherical polar coordinate system. \subsection{Overview} +\label{www:tutorials} This example experiment demonstrates using the MITgcm to simulate a baroclinic, wind-forced, ocean gyre circulation. The experiment @@ -118,6 +120,7 @@ \end{figure} \subsection{Equations solved} +\label{www:tutorials} For this problem the implicit free surface, {\bf HPE} (see section \ref{sect:hydrostatic_and_quasi-hydrostatic_forms}) form of the equations described in Marshall et. al \cite{marshall:97a} are @@ -202,6 +205,7 @@ \subsection{Discrete Numerical Configuration} +\label{www:tutorials} The domain is discretised with a uniform grid spacing in latitude and longitude @@ -261,6 +265,7 @@ \ref{sect:finding_the_pressure_field}. \subsubsection{Numerical Stability Criteria} +\label{www:tutorials} The Laplacian viscosity coefficient, $A_{h}$, is set to $400 m s^{-1}$. This value is chosen to yield a Munk layer width, @@ -340,6 +345,7 @@ stability limit of 0.25. \subsection{Code Configuration} +\label{www:tutorials} \label{SEC:eg_fourl_code_config} The model configuration for this experiment resides under the @@ -359,6 +365,7 @@ to these files associated with this experiment. \subsubsection{File {\it input/data}} +\label{www:tutorials} This file, reproduced completely below, specifies the main parameters for the experiment. The parameters that are significant for this configuration @@ -946,16 +953,19 @@ \begin{rawhtml}\end{rawhtml} \subsubsection{File {\it input/data.pkg}} +\label{www:tutorials} This file uses standard default values and does not contain customisations for this experiment. \subsubsection{File {\it input/eedata}} +\label{www:tutorials} This file uses standard default values and does not contain customisations for this experiment. \subsubsection{File {\it input/windx.sin\_y}} +\label{www:tutorials} The {\it input/windx.sin\_y} file specifies a two-dimensional ($x,y$) map of wind stress ,$\tau_{x}$, values. The units used are $Nm^{-2}$ (the @@ -969,6 +979,7 @@ code for creating the {\it input/windx.sin\_y} file. \subsubsection{File {\it input/topog.box}} +\label{www:tutorials} The {\it input/topog.box} file specifies a two-dimensional ($x,y$) @@ -980,6 +991,7 @@ code for creating the {\it input/topog.box} file. \subsubsection{File {\it code/SIZE.h}} +\label{www:tutorials} Two lines are customized in this file for the current experiment @@ -1006,17 +1018,20 @@ \end{small} \subsubsection{File {\it code/CPP\_OPTIONS.h}} +\label{www:tutorials} This file uses standard default values and does not contain customisations for this experiment. \subsubsection{File {\it code/CPP\_EEOPTIONS.h}} +\label{www:tutorials} This file uses standard default values and does not contain customisations for this experiment. \subsubsection{Other Files } +\label{www:tutorials} Other files relevant to this experiment are \begin{itemize} @@ -1029,15 +1044,18 @@ \end{itemize} \subsection{Running The Example} +\label{www:tutorials} \label{SEC:running_the_example} \subsubsection{Code Download} +\label{www:tutorials} In order to run the examples you must first download the code distribution. Instructions for downloading the code can be found in section \ref{sect:obtainingCode}. \subsubsection{Experiment Location} +\label{www:tutorials} This example experiments is located under the release sub-directory @@ -1045,6 +1063,7 @@ {\it verification/exp2/ } \subsubsection{Running the Experiment} +\label{www:tutorials} To run the experiment