Diff of /manual/s_ecco/text/ecco.tex

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--- manual/s_ecco/text/ecco.tex	2016/09/21 12:50:01	1.4
+++ manual/s_ecco/text/ecco.tex	2016/09/23 18:26:49	1.5
@@ -92,7 +92,8 @@
 \texttt{gencost\_enddate1} 	&	integer	&	Not fully implemented (used only in sec.~\ref{v4custom})\\
 \texttt{gencost\_enddate2} 	&	integer	&	Not fully implemented (used only in sec.~\ref{v4custom})\\
 \end{tabular}
-\caption{Parameters in \texttt{ecco\_gencost\_nml} namelist in \texttt{data.ecco}. All parameters are vectors of length \texttt{NGENCOST} (the \# of available cost terms) except for \texttt{gencost\_*proc*} are arrays of size \texttt{NGENPPROC}$\times$\texttt{NGENCOST}. Notes: \texttt{gencost\_is3d} is automatically reset to true in all 3D cases in table~\ref{tbl:gencost_ecco_barfile}.}
+\caption{Parameters in \texttt{ecco\_gencost\_nml} namelist in \texttt{data.ecco}. All parameters are vectors of length \texttt{NGENCOST} (the \# of available cost terms) except for \texttt{gencost\_*proc*} are arrays of size \texttt{NGENPPROC}$\times$\texttt{NGENCOST}. Notes: \texttt{gencost\_is3d} is automatically reset to true in all 3D cases in table~\ref{tbl:gencost_ecco_barfile}; 
+NGENCOST (20) and NGENPPROC (10) can be changed in ecco.h only at compile time.}
 \label{tbl:gencost_ecco_params}
 \end{table}
 
@@ -205,8 +206,21 @@
 
 \subsection{Key Routines}
 
-TBA... \texttt{cost\_generic.F}, \texttt{cost\_gencost\_boxmean.F}, \texttt{ecco\_phys.F}, \texttt{cost\_gencost\_customize.F}, \texttt{cost\_averagesfields.F}, \texttt{ecco\_toolbox.F}, ... \texttt{ecco\_readparms.F}, \texttt{ecco\_check.F}, \texttt{ecco\_summary.F}, ...
+TBA... 
+\bigskip
+\texttt{ecco\_readparms.F}, \texttt{ecco\_check.F}, \texttt{ecco\_summary.F}, ...
+\texttt{cost\_generic.F}, \texttt{cost\_gencost\_boxmean.F}, \texttt{ecco\_toolbox.F}, ... 
+\texttt{ecco\_phys.F}, \texttt{cost\_gencost\_customize.F}, \texttt{cost\_averagesfields.F}, ...
 
 \subsection{Compile Options}
 
-TBA... ALLOW\_GENCOST3D, ALLOW\_PSBAR\_STERIC, ECCO\_CTRL\_DEPRECATED, ...
+TBA... 
+\bigskip
+ALLOW\_GENCOST\_CONTRIBUTION, ALLOW\_GENCOST3D, ... 
+ALLOW\_PSBAR\_STERIC, ALLOW\_SHALLOW\_ALTIMETRY, ALLOW\_HIGHLAT\_ALTIMETRY, ...
+ALLOW\_PROFILES\_CONTRIBUTION, ... 
+ALLOW\_ECCO\_OLD\_FC\_PRINT, ...
+ECCO\_CTRL\_DEPRECATED, ...
+\bigskip
+packages required for some functionalities: smooth, profiles, ctrl
+