/[MITgcm]/manual/s_autodiff/text/doc_ad_2.tex
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revision 1.9 by heimbach, Tue Nov 13 21:06:21 2001 UTC revision 1.13 by heimbach, Fri Jan 18 22:56:45 2002 UTC
# Line 1258  In this section we describe in a general Line 1258  In this section we describe in a general
1258  the parts of the code that are relevant for automatic  the parts of the code that are relevant for automatic
1259  differentiation using the software tool TAMC.  differentiation using the software tool TAMC.
1260    
 \begin{figure}[b!]  
1261  \input{part5/doc_ad_the_model}  \input{part5/doc_ad_the_model}
 \caption{~}  
 \label{fig:adthemodel}  
 \end{figure}  
1262    
1263  The basic flow is depicted in \ref{fig:adthemodel}.  The basic flow is depicted in \ref{fig:adthemodel}.
1264  If the option {\tt ALLOW\_AUTODIFF\_TAMC} is defined, the driver routine  If the option {\tt ALLOW\_AUTODIFF\_TAMC} is defined, the driver routine
# Line 1299  All aspects relevant to the treatment of Line 1295  All aspects relevant to the treatment of
1295  (parameter setting, initialization, accumulation,  (parameter setting, initialization, accumulation,
1296  final evaluation), are controlled by the package {\it pkg/cost}.  final evaluation), are controlled by the package {\it pkg/cost}.
1297    
 \begin{figure}[h!]  
1298  \input{part5/doc_cost_flow}  \input{part5/doc_cost_flow}
 \caption{~}  
 \label{fig:costflow}  
 \end{figure}  
1299    
1300  \subsubsection{genmake and CPP options}  \subsubsection{genmake and CPP options}
1301  %  %
# Line 1434  tamc -output 'fc' ... Line 1426  tamc -output 'fc' ...
1426    
1427  %%%% \end{document}  %%%% \end{document}
1428    
 \begin{figure}  
1429  \input{part5/doc_ad_the_main}  \input{part5/doc_ad_the_main}
 \caption{~}  
 \label{fig:adthemain}  
 \end{figure}  
1430    
1431  \subsection{The control variables (independent variables)  \subsection{The control variables (independent variables)
1432  \label{section_ctrl}}  \label{section_ctrl}}
# Line 1458  All aspects relevant to the treatment of Line 1446  All aspects relevant to the treatment of
1446  (parameter setting, initialization, perturbation)  (parameter setting, initialization, perturbation)
1447  are controlled by the package {\it pkg/ctrl}.  are controlled by the package {\it pkg/ctrl}.
1448    
 \begin{figure}[h!]  
1449  \input{part5/doc_ctrl_flow}  \input{part5/doc_ctrl_flow}
 \caption{~}  
 \label{fig:ctrlflow}  
 \end{figure}  
1450    
1451  \subsubsection{genmake and CPP options}  \subsubsection{genmake and CPP options}
1452  %  %
# Line 1913  to {\it adxx\_...$<$k$>$}, again via the Line 1897  to {\it adxx\_...$<$k$>$}, again via the
1897  Finally, {\it ctrl\_pack} collects all adjoint files  Finally, {\it ctrl\_pack} collects all adjoint files
1898  and writes them to the compressed vector file  and writes them to the compressed vector file
1899  {\bf vector\_grad\_$<$k$>$}.  {\bf vector\_grad\_$<$k$>$}.
   
 \subsection{TLM and ADM generation via TAMC}  
   
   
   
 \subsection{Flow directives and adjoint support routines \label{section_flowdir}}  
   
 \subsection{Store directives and checkpointing \label{section_checkpointing}}  
   
 \subsection{Gradient checks \label{section_grdchk}}  
   
 \subsection{Second derivative generation via TAMC}  
   
 \section{Example of adjoint code}  
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