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 o add Baylor's nonlinear viscosity docs and his bibliography

1 % $Header: $
2 % $Name: $
3
4 \def\del{{\mathbf \nabla}}
5 \def\av#1{\overline{#1}}
6 \def\pd#1#2{{\frac{\partial{#2}}{\partial#1}}}
7 \def\pds#1#2{{\frac{\partial^2{#2}}{{\partial#1}^2}}}
8 \def\Dt#1{\frac{D{#1}}{Dt}}
9 \def\aDt#1{\frac{\av D{#1}}{\av{Dt}}}
10 \def\d#1{{\,\rm d#1}}
11 \def\Ro{{\rm Ro}}
12 \def\Re{{\rm Re}}
13 \def\Fr{{\rm Fr}}
14 \def\mr{{m_{Ro}}}
15 \def\Mr{{M_{Ro}}}
16 \def\eg{{\emph{e.g.,}\ }}
17 \def\ie{{\emph{i.e.,}\ }}
18 \def\tu{{\tilde u}}
19 \def\tv{{\tilde v}}
20 \def\atu{{\tilde {\av u}}}
21 \def\atv{{\tilde {\av v}}}
22 \def\lesssim{{<\atop\sim}}
23
24
25 \section{Nonlinear Viscosities for Large Eddy Simulation}
26 \label{sect:nonlin-visc}
27
28 In Large Eddy Simulations (LES), a turbulent closure needs to be
29 provided that accounts for the effects of subgridscale motions on the
30 large scale. With sufficiently powerful computers, we could resolve
31 the entire flow down to the molecular viscosity scales
32 {($L_{\nu}\approx 1 \rm cm$)}. Current computation allows perhaps
33 four decades to be resolved, so the largest problem computationally
34 feasible would be about 10m. Most oceanographic problems are much
35 larger in scale, so some form of LES is required, where only the
36 largest scales of motion are resolved, and the subgridscale's effects
37 on the large-scale are parameterized.
38
39 To formalize this process, we can introduce a filter over the
40 subgridscale L: $u_\alpha\rightarrow \av u_\alpha$ and $L:
41 b\rightarrow \av b$. This filter has some intrinsic length and time
42 scales, and we assume that the flow at that scale can be characterized
43 with a single velocity scale ($V$) and vertical buoyancy gradient
44 ($N^2$). The filtered equations of motion in a local Mercator
45 projection about the gridpoint in question (see Appendix for notation
46 and details of approximation) are: \newpage
47 \begin{eqnarray}
48 \aDt \atu- \frac{\atv \sin\theta}{\Ro\sin\theta_0}+\frac{\Mr}{\Ro}\pd{x}{\av\pi}=-\left({\av{\Dt \tu}}-{\aDt \atu}\right)+\frac{\nabla^2{\atu}}{\Re}\label{eq:mercat}\\
49 \aDt\atv+ \frac{\atu\sin\theta}{\Ro\sin\theta_0}+\frac{\Mr}{\Ro}\pd{y}{\av\pi}=-\left({\av{\Dt \tv}}-{\aDt \atv}\right)+\frac{\nabla^2{\atv}}{\Re}\nonumber\\
50 \aDt {\av w} +\frac{\pd{z}{\av\pi}-\av b}{\Fr^2\lambda^2}=-\left(\av{\Dt w}-\aDt {\av{w}}\right)+\frac{\nabla^2\av w}{\Re}\nonumber\\
51 \aDt{\ \av b}+\av w=-\left(\av{\Dt{b}}-\aDt{\ \av b} \right)+\frac{\nabla^2 \av b}{\Pr\Re}\nonumber \\
52 \mu^2\left(\pd x\atu + \pd y\atv \right)+\pd z {\av w} =0\label{eq:cont}
53 \end{eqnarray}
54 Tildes denote multiplication by $\cos\theta/\cos\theta_0$ to account
55 for converging meridians.
56
57 The ocean is usually turbulent, and an operational definition of
58 turbulence is that the terms in parentheses (the 'eddy' terms) on the
59 right of (\ref{eq:mercat}) are of comparable magnitude to the terms on
60 the left-hand side. The terms proportional to the inverse of \Re,
61 instead, are many orders of magnitude smaller than all of the other
62 terms in virtually every oceanic application.
63
64 \subsection{Eddy Viscosity}
65 A turbulent closure provides an approximation to the 'eddy' terms on
66 the right of the preceding equations. The simplest form of LES is
67 just to increase the viscosity and diffusivity until the viscous and
68 diffusive scales are resolved. That is, we approximate:
69 \begin{eqnarray}
70 \left({\av{\Dt \tu}}-{\aDt \atu}\right)\approx\frac{\nabla^2_h{\atu}}{\Re_h}+\frac{\pds{z}{\atu}}{\Re_v}\label{eq:eddyvisc},\qquad
71 \left({\av{\Dt \tv}}-{\aDt \atv}\right)\approx\frac{\nabla^2_h{\atv}}{\Re_h}+\frac{\pds{z}{\atv}}{\Re_v}\nonumber\\
72 \left(\av{\Dt w}-\aDt {\av{w}}\right)\approx\frac{\nabla^2_h\av w}{\Re_h}+\frac{\pds{z}{\av w}}{\Re_v}\nonumber,\qquad
73 \left(\av{\Dt{b}}-\aDt{\ \av b} \right)\approx\frac{\nabla^2_h \av b}{\Pr\Re_h}+\frac{\pds{z} {\av b}}{\Pr\Re_v}\nonumber
74 \end{eqnarray}
75
76 \subsubsection{Reynolds-Number Limited Eddy Viscosity}
77 One way of ensuring that the gridscale is sufficiently viscous (\ie
78 resolved) is to choose the eddy viscosity $A_h$ so that the gridscale
79 horizontal Reynolds number based on this eddy viscosity, $\Re_h$, to
80 is O(1). That is, if the gridscale is to be viscous, then the
81 viscosity should be chosen to make the viscous terms as large as the
82 advective ones. \citet{Bryanetal75} note that a computational mode is
83 squelched by using $\Re_h<$2.
84
85 The MITgcm user can select an horizontal eddy viscosity based on
86 $\Re_h$ by two methods. 1) The user may estimate the velocity scale
87 expected from the calculation and grid spacing and set the {\sf
88 viscAh} to satisfy $\Re_h<2$. 2) The user may use {\sf
89 viscAhReMax}, which ensures that the viscosity is always chosen so
90 that $\Re_h<{\sf viscAhReMax}$. This last option should be used with
91 caution, however, since it effectively implies that viscous terms are
92 fixed in magnitude relative to advective terms. While it may be a
93 useful method for specifying a minimum viscosity with little effort,
94 tests have shown that setting {\sf viscAhReMax}=2
95 \citep[per][]{Bryanetal75} often tends to increase the viscosity
96 substantially over other more 'physical' parameterizations below,
97 especially in regions where gradients of velocity are small (and thus
98 turbulence may be weak), so perhaps a more liberal value should be
99 used, \eg {\sf viscAhReMax}=10.
100
101 While it is certainly necessary that viscosity be active at the
102 gridscale, the wavelength where dissipation of energy or enstrophy
103 occurs is not necessarily $L=A_h/U$. In fact, it is by ensuring that
104 the either the dissipation of energy in a 3-d turbulent cascade
105 (Smagorinsky) or dissipation of enstrophy in a 2-d turbulent cascade
106 (Leith) is resolved that these parameterizations derive their physical
107 meaning.
108
109 \subsubsection{Vertical Eddy Viscosities}
110 Vertical eddy viscosities are often chosen in a more subjective way,
111 as model stability is not usually as sensitive to vertical viscosity.
112 Usually the 'observed' value from finescale measurements, etc., is
113 used (\eg {\sf viscAr}$\approx1\times10^{-4} m^2/s$). However,
114 \citet{Smagorinsky93} notes that the Smagorinsky parameterization of
115 isotropic turbulence implies a value of the vertical viscosity as well
116 as the horizontal viscosity (see below).
117
118 \subsubsection{Smagorinsky Viscosity}
119 \citet{sm63} and \citet{Smagorinsky93} suggest choosing a viscosity
120 that \emph{depends on the resolved motions}. Thus, the overall
121 viscous operator has a nonlinear dependence on velocity. Smagorinsky
122 chose his form of viscosity by considering Kolmogorov's ideas about
123 the energy spectrum of 3-d isotropic turbulence.
124
125 Kolmogorov suppposed that is that energy is injected into the flow at
126 large scales (small $k$) and is 'cascaded' or transferred
127 conservatively by nonlinear processes to smaller and smaller scales
128 until it is dissipated near the viscous scale. By setting the energy
129 flux through a particular wavenumber $k$, $\epsilon$, to be a constant
130 in $k$, there is only one combination of viscosity and energy flux
131 that has the units of length, the Kolmogorov wavelength. It is
132 $L_\epsilon(\nu)\propto\pi\epsilon^{-1/4}\nu^{3/4}$ (the $\pi$ stems
133 from conversion from wavenumber to wavelength). To ensure that this
134 viscous scale is resolved in a numerical model, the gridscale should
135 be decreased until $L_\epsilon(\nu)>L$ (so-called Direct Numerical
136 Simulation, or DNS). Alternatively, an eddy viscosity can be used and
137 the corresponding Kolmogorov length can be made larger than the
138 gridscale, $L_\epsilon(A_h)\propto\pi\epsilon^{-1/4}A_h^{3/4}$ (for
139 Large Eddy Simulation or LES).
140
141 There are two methods of ensuring that the Kolmogorov length is
142 resolved in the MITgcm. 1) The user can estimate the flux of energy
143 through spectral space for a given simulation and adjust grid spacing
144 or {\sf viscAh} to ensure that $L_\epsilon(A_h)>L$. 2) The user may
145 use the approach of Smagorinsky with {\sf viscC2Smag}, which estimates
146 the energy flux at every grid point, and adjusts the viscosity
147 accordingly.
148
149 Smagorinsky formed the energy equation from the momentum equations by
150 dotting them with velocity. \citep[There are some complications when
151 using the hydrostatic approximation, see][]{Smagorinsky93}. The
152 positive definite energy dissipation by horizontal viscosity in a
153 hydrostatic flow is $\nu D^2$, where D is the deformation rate at the
154 viscous scale. According to Kolmogorov's theory, this should be a
155 good approximation to the energy flux at any wavenumber
156 $\epsilon\approx\nu D^2$. Kolmogorov and Smagorinsky noted that using
157 an eddy viscosity that exceeds the molecular value $\nu$ should ensure
158 that the energy flux through viscous scale set by the eddy viscosity
159 is the same as it would have been had we resolved all the way to the
160 true viscous scale. That is, $\epsilon\approx A_{hSmag} \av D^2$. If
161 we use this approximation to estimate the Kolmogorov viscous length,
162 then
163 \begin{eqnarray}
164 L_\epsilon(A_{hSmag})\propto\pi\epsilon^{-1/4}A_{hSmag}^{3/4}\approx\pi(A_{hSmag} \av D^2)^{-1/4}A_{hSmag}^{3/4}=\pi A_{hSmag}^{1/2}\av D^{-1/2}
165 \end{eqnarray}
166 To make $L_\epsilon(A_{hSmag})$ scale with the gridscale, then
167 \begin{eqnarray}
168 A_{hSmag}=\left(\frac{{\sf viscC2Smag}}{\pi}\right)^2L^2|\av D|
169 \end{eqnarray}
170 Where the deformation rate appropriate for hydrostatic flows with
171 shallow-water scaling is
172 \begin{eqnarray}
173 |\av D|=\sqrt{\left(\pd{x}{\av \tu}-\pd{y}{\av \tv}\right)^2+\left(\pd{y}{\av \tu}+\pd{x}{\av \tv}\right)^2}
174 \end{eqnarray}
175 The coefficient {\sf viscC2Smag} is what the MITgcm user sets, and it
176 replaces the proportionality in the Kolmogorov length with an
177 equality. \citet{grha00} suggest values of {\sf viscC2Smag} from 2.2
178 to 4 for oceanic problems. \citet{Smagorinsky93} shows that values
179 from 0.2 to 0.9 have been used in atmospheric modeling.
180
181 \citet{Smagorinsky93} shows that a corresponding vertical viscosity
182 should be used:
183 \begin{eqnarray}
184 A_{vSmag}=\left(\frac{{\sf viscC2Smag}}{\pi}\right)^2H^2\sqrt{\left(\pd{z}{\av \tu}\right)^2+\left(\pd{z}{\av \tv}\right)^2}\nonumber
185 \end{eqnarray}
186 This vertical viscosity is currently not implemented in the MITgcm
187 (although it may be soon).
188
189 \subsubsection{Leith Viscosity}
190 \citet{Leith68,Leith96} notes that 2-d turbulence is quite different
191 from 3-d. In two-dimensional turbulence, energy cascades to larger
192 scales, so there is no concern about resolving the scales of energy
193 dissipation. Instead, another quantity, enstrophy, (which is the
194 vertical component of vorticity squared) is conserved in 2-d
195 turbulence, and it cascades to smaller scales where it is dissipated.
196
197 Following a similar argument to that above about energy flux, the
198 enstrophy flux is estimated to be equal to the positive-definite
199 gridscale dissipation rate of enstrophy $\eta\approx A_{hLeith}
200 |\nabla\av \omega_3|^2$. By dimensional analysis, the
201 enstrophy-dissipation scale is $L_\eta(A_{hLeith})\propto\pi
202 A_{hLeith}^{1/2}\eta^{-1/6}$. Thus, the Leith-estimated length scale
203 of enstrophy-dissipation and the resulting eddy viscosity are
204 \begin{eqnarray}
205 L_\eta(A_{hLeith})\propto\pi A_{hLeith}^{1/2}\eta^{-1/6}=\pi A_{hLeith}^{1/3}|\nabla \av \omega_3|^{-1/3}\\
206 A_{hLeith}={\sf viscC2Leith}|\nabla \av \omega_3|L^3\\
207 |\nabla\omega_3|\equiv\sqrt{\left[\pd{x}{\ }\left(\pd{x}{\av \tv}-\pd{y}{\av \tu}\right)\right]^2+\left[\pd{y}{\ }\left(\pd{x}{\av \tv}-\pd{y}{\av \tu}\right)\right]^2}
208 \end{eqnarray}
209 NOTE:: may be useful to redefine viscC2Leith for consistency with Smag...
210 \begin{eqnarray}
211 A_{hLeith}=\left(\frac{{\sf viscC2Leith}}{\pi}\right)^3L^3|\nabla \av \omega_3|
212 \end{eqnarray}
213
214 \subsubsection{Modified Leith Viscosity}
215 The argument above for the Leith viscosity parameterization uses
216 concepts from purely 2-dimensional turbulence, where the horizontal
217 flow field is assumed to be divergenceless. However, oceanic flows
218 are only quasi-two dimensional. While the barotropic flow, or the
219 flow within isopycnal layers may behave nearly as two-dimensional
220 turbulence, there is a possibility that these flows will be divergent.
221 In a high-resolution numerical model, these flows may be substantially
222 divergent near the grid scale, and in fact, numerical instabilities
223 exist which are only horizontally divergent and have little vertical
224 vorticity. This causes a difficulty with the Leith viscosity, which
225 can only responds to buildup of vorticity at the grid scale.
226
227 The MITgcm offers two options for dealing with this problem. 1) The
228 Smagorinsky viscosity can be used instead of Leith, or in conjunction
229 with Leith--a purely divergent flow does cause an increase in
230 Smagorinsky viscosity. 2) The {\sf viscC2LeithD} parameter can be
231 set. This is a damping specifically targeting purely divergent
232 instabilities near the gridscale. The combined viscosity has the
233 form:
234 \begin{eqnarray}
235 A_{hLeith}=L^3\sqrt{\left(\frac{{\sf viscC2Leith}}{\pi}\right)^6|\nabla \av \omega_3|^2+\left(\frac{{\sf viscC2LeithD}}{\pi}\right)^6|\nabla \nabla\cdot \av {\tilde u}_h|^2}\nonumber\\
236 |\nabla \nabla\cdot \av {\tilde u}_h|\equiv\sqrt{\left[\pd{x}{\ }\left(\pd{x}{\av \tu}+\pd{y}{\av \tv}\right)\right]^2+\left[\pd{y}{\ }\left(\pd{x}{\av \tu}+\pd{y}{\av \tv}\right)\right]^2}
237 \end{eqnarray}
238 Whether there is any physical rationale for this correction is unclear
239 at the moment, but the numerical consequences are good. The
240 divergence in flows with the grid scale larger or comparable to the
241 Rossby radius is typically much smaller than the vorticity, so this
242 adjustment only rarely adjusts the viscosity if ${\sf
243 viscC2LeithD}={\sf viscC2Leith}$. However, the rare regions where
244 this viscosity acts are often the locations for the largest vales of
245 vertical velocity in the domain. Since the CFL condition on vertical
246 velocity is often what sets the maximum timestep, this viscosity may
247 substantially increase the allowable timestep without severely
248 compromising the verity of the simulation. Tests have shown that in
249 some calculations, a timestep three times larger was allowed when
250 ${\sf viscC2LeithD}={\sf viscC2Leith}$.
251
252 \subsubsection{Courant--Freidrichs--Lewy Constraint on Viscosity}
253 Whatever viscosities are used in the model, the choice is constrained
254 by gridscale and timestep by the Courant--Freidrichs--Lewy (CFL)
255 constraint on stability:
256 \begin{eqnarray}
257 A_h<\frac{L^2}{4\Delta t}\nonumber\\
258 A_4 \le \frac{L^4}{32\Delta t}\nonumber
259 %% A_4\lesssim\frac{L^4}{32\Delta t}\nonumber
260 \end{eqnarray}
261 The viscosities may be automatically limited to be no greater than
262 these values in the MITgcm by specifying {\sf viscAhGridMax}$<1$ and
263 {\sf viscA4GridMax}$<1$. Similarly-scaled minimum values of
264 viscosities are provided by {\sf viscAhGridMin} and {\sf
265 viscA4GridMin}, which if used, should be set to values $\ll 1$. $L$
266 is roughly the gridscale (see below).
267
268 Following \citet{grha00}, we note that there is a factor of $\Delta
269 x^2/8$ difference between the harmonic and biharmonic viscosities.
270 Thus, whenever a non-dimensional harmonic coefficient is used in the
271 MITgcm (\eg {\sf viscAhGridMax}$<1$), the biharmonic equivalent is
272 scaled so that the same non-dimensional value can be used (\eg {\sf
273 viscA4GridMax}$<1$).
274
275 \subsubsection{Biharmonic Viscosity}
276 \citet{ho78} suggested that eddy viscosities ought to be focuses on
277 the dynamics at the grid scale, as larger motions would be 'resolved'.
278 To enhance the scale selectivity of the viscous operator, he suggested
279 a biharmonic eddy viscosity instead of a harmonic (or Laplacian)
280 viscosity:
281 \begin{eqnarray}
282 \left({\av{\Dt \tu}}-{\aDt \atu}\right)\approx\frac{-\nabla^4_h{\atu}}{\Re_4}+\frac{\pds{z}{\atu}}{\Re_v}\label{eq:bieddyvisc},\qquad
283 \left({\av{\Dt \tv}}-{\aDt \atv}\right)\approx\frac{-\nabla^4_h{\atv}}{\Re_4}+\frac{\pds{z}{\atv}}{\Re_v}\nonumber\\
284 \left(\av{\Dt w}-\aDt {\av{w}}\right)\approx\frac{-\nabla^4_h\av w}{\Re_4}+\frac{\pds{z}{\av w}}{\Re_v}\nonumber,\qquad
285 \left(\av{\Dt{b}}-\aDt{\ \av b} \right)\approx\frac{-\nabla^4_h \av b}{\Pr\Re_4}+\frac{\pds{z} {\av b}}{\Pr\Re_v}\nonumber
286 \end{eqnarray}
287 \citet{grha00} propose that if one scales the biharmonic viscosity by
288 stability considerations, then the biharmonic viscous terms will be
289 similarly active to harmonic viscous terms at the gridscale of the
290 model, but much less active on larger scale motions. Similarly, a
291 biharmonic diffusivity can be used for less diffusive flows.
292
293 In practice, biharmonic viscosity and diffusivity allow a less
294 viscous, yet numerically stable, simulation than harmonic viscosity
295 and diffusivity. However, there is no physical rationale for such
296 operators being of leading order, and more boundary conditions must be
297 specified than for the harmonic operators. If one considers the
298 approximations of \ref{eq:eddyvisc} and \ref{eq:bieddyvisc} to be
299 terms in the Taylor series expansions of the eddy terms as functions
300 of the large-scale gradient, then one can argue that both harmonic and
301 biharmonic terms would occur in the series, and the only question is
302 the choice of coefficients. Using biharmonic viscosity alone implies
303 that one zeros the first non-vanishing term in the Taylor series,
304 which is unsupported by any fluid theory or observation.
305
306 Nonetheless, the MITgcm supports a plethora of biharmonic viscosities
307 and diffusivities, which are controlled with parameters named
308 similarly to the harmonic viscosities and diffusivities with the
309 substitution $h\rightarrow 4$. The MITgcm also supports a biharmonic
310 Leith and Smagorinsky viscosities:
311 \begin{eqnarray}
312 A_{4Smag}=\left(\frac{{\sf viscC4Smag}}{\pi}\right)^2\frac{L^4}{8}|D|\nonumber\\
313 A_{4Leith}=\frac{L^5}{8}\sqrt{\left(\frac{{\sf viscC4Leith}}{\pi}\right)^6|\nabla \av \omega_3|^2+\left(\frac{{\sf viscC4LeithD}}{\pi}\right)^6|\nabla \nabla\cdot \av {\bf \tu}_h|^2}\nonumber
314 \end{eqnarray}
315 However, it should be noted that unlike the harmonic forms, the
316 biharmonic scaling does not easily relate to whether
317 energy-dissipation or enstrophy-dissipation scales are resolved. If
318 similar arguments are used to estimate these scales and scale them to
319 the gridscale, the resulting biharmonic viscosities should be:
320 \begin{eqnarray}
321 A_{4Smag}=\left(\frac{{\sf viscC4Smag}}{\pi}\right)^5L^5|\nabla^2\av {\bf \tu}_h|\nonumber\\
322 A_{4Leith}=L^6\sqrt{\left(\frac{{\sf viscC4Leith}}{\pi}\right)^{12}|\nabla^2 \av \omega_3|^2+\left(\frac{{\sf viscC4LeithD}}{\pi}\right)^{12}|\nabla^2 \nabla\cdot \av {\bf \tu}_h|^2}\nonumber
323 \end{eqnarray}
324 Thus, the biharmonic scaling suggested by \citet{grha00} implies:
325 \begin{eqnarray}
326 |D|\propto L|\nabla^2\av {\bf \tu}_h|\\
327 |\nabla \av \omega_3|\propto L|\nabla^2 \av \omega_3|
328 \end{eqnarray}
329 It is not at all clear that these assumptions ought to hold. Only the \citet{grha00} forms are currently implemented in the MITgcm.
330
331 \subsubsection{Selection of Length Scale}
332 Above, the length scale of the grid has been denoted $L$. However, in
333 strongly anisotropic grids, $L_x$ and $L_y$ will be quite different in
334 some locations. In that case, the CFL condition suggests that the
335 minimum of $L_x$ and $L_y$ be used. On the other hand, other
336 viscosities which involve whether a particular wavelength is
337 'resolved' might be better suited to use the maximum of $L_x$ and
338 $L_y$. Currently the MITgcm uses {\sf useAreaViscLength} to select
339 between two options. If false, the geometric mean of $L^2_x$ and
340 $L^2_y$ is used for all viscosities, which is closer to the minimum
341 and occurs naturally in the CFL constraint. If {\sf
342 useAreaViscLength} is true, then the square root of the area of the
343 grid cell is used.
344
345 % The Appendices part is started with the command \appendix;
346 % appendix sections are then done as normal sections
347 % \appendix
348
349 \subsection{Mercator, Nondimensional Equations}
350 The rotating, incompressible, Boussinesq equations of motion
351 \citep{Gill1982} on a sphere can be written in Mercator projection
352 about a latitude $\theta_0$ and geopotential height $z=r-r_0$. The
353 nondimensional form of these equations is:
354 \begin{eqnarray}
355 \Ro\Dt\tu- \frac{\tv \sin\theta}{\sin\theta_0}+\Mr\pd{x}{\pi}+\frac{\lambda\Fr^2\Mr\cos \theta}{\mu\sin\theta_0} w=-\frac{\Fr^2\Mr \tu w}{r/H}+\frac{\Ro{\bf \hat x}\cdot\nabla^2{\bf u}}{\Re}\nonumber\\
356 \Ro\Dt\tv+ \frac{\tu\sin\theta}{\sin\theta_0}+\Mr\pd{y}{\pi}=-\frac{\mu\Ro\tan\theta(\tu^2+\tv^2)}{r/L} -\frac{\Fr^2\Mr \tv w}{r/H}+\frac{\Ro{\bf \hat y}\cdot\nabla^2{\bf u}}{\Re}\nonumber\\
357 \Fr^2\lambda^2\Dt w -b+\pd{z}{\pi}-\frac{\lambda\cot \theta_0 \tu}{\Mr}=\frac{\lambda\mu^2(\tu^2+\tv^2)}{\Mr(r/L)}+\frac{\Fr^2\lambda^2{\bf \hat z}\cdot\nabla^2{\bf u}}{\Re}\nonumber\\
358 \Dt b+w=\frac{\nabla^2 b}{\Pr\Re}\nonumber, \qquad
359 \mu^2\left(\pd x\tu + \pd y\tv \right)+\pd z w =0\nonumber
360 \end{eqnarray}
361 Where
362 \begin{eqnarray}
363 \mu\equiv\frac{\cos\theta_0}{\cos\theta},\qquad\tu=\frac{u^*}{V\mu},\qquad\tv=\frac{v^*}{V\mu} , \qquad \Dt\ \equiv \mu^2\left(\tu\pd x\ +\tv \pd y\ \right)+\frac{\Fr^2\Mr}{\Ro} w\pd z \nonumber \\
364 f_0\equiv2\Omega\sin\theta_0,\qquad x\equiv \frac{r}{L} \phi \cos \theta_0, \qquad y\equiv \frac{r}{L} \int_{\theta_0}^\theta\frac{\cos \theta_0 \d \theta'}{\cos\theta'}, \qquad z\equiv \lambda\frac{r-r_0}{L}\nonumber\\
365 t^*=t \frac{L}{V},\qquad b^*= b\frac{V f_0\Mr}{\lambda},\qquad \pi^*=\pi V f_0 L\Mr,\qquad w^*=w V \frac{\Fr^2\lambda\Mr}{\Ro}\nonumber\\
366 \Ro\equiv\frac{V}{f_0 L},\qquad \Mr\equiv \max[1,\Ro], \qquad \Fr\equiv\frac{V}{N \lambda L}, \qquad \Re\equiv\frac{VL}{\nu}, \qquad \Pr\equiv\frac{\nu}{\kappa}\nonumber
367 \end{eqnarray}
368 Dimensional variables are denoted by an asterisk where necessary. If
369 we filter over a grid scale typical for ocean models ($1m<L<100km$,
370 $0.0001<\lambda<1$, $0.001m/s <V<1 m/s$, $f_0<0.0001 s^{-1}$, $0.01
371 s^{-1}<N<0.0001 s^{-1}$), these equations are very well approximated
372 by
373 \begin{eqnarray}
374 \Ro{\Dt\tu}- \frac{\tv \sin\theta}{\sin\theta_0}+\Mr\pd{x}{\pi}=-\frac{\lambda\Fr^2\Mr\cos \theta}{\mu\sin\theta_0} w+\frac{\Ro\nabla^2{\tu}}{\Re}\nonumber\\
375 \Ro\Dt\tv+ \frac{\tu\sin\theta}{\sin\theta_0}+\Mr\pd{y}{\pi}=\frac{\Ro\nabla^2{\tv}}{\Re}\nonumber\\
376 \Fr^2\lambda^2\Dt w -b+\pd{z}{\pi}=\frac{\lambda\cot \theta_0 \tu}{\Mr}\nonumber+\frac{\Fr^2\lambda^2\nabla^2w}{\Re}\\
377 \Dt b+w=\frac{\nabla^2 b}{\Pr\Re}\nonumber, \qquad
378 \mu^2\left(\pd x\tu + \pd y\tv \right)+\pd z w =0\nonumber\\
379 \nabla^2\approx\left(\frac{\partial^2}{\partial x^2}+\frac{\partial^2}{\partial y^2}+\frac{\partial^2}{\lambda^2\partial z^2}\right)\nonumber
380 \end{eqnarray}
381 Neglecting the non-frictional terms on the right-hand side is usually
382 called the 'traditional' approximation. It is appropriate, with
383 either large aspect ratio or far from the tropics. This approximation
384 is used here, as it does not affect the form of the eddy stresses
385 which is the main topic. The frictional terms are preserved in this
386 approximate form for later comparison with eddy stresses.
387 % \label{}
388
389 % Bibliographic references with the natbib package:
390 % Parenthetical: \citep{Bai92} produces (Bailyn 1992).
391 % Textual: \citet{Bai95} produces Bailyn et al. (1995).
392 % An affix and part of a reference:
393 % \citep[e.g.][Ch. 2]{Bar76}
394 % produces (e.g. Barnes et al. 1976, Ch. 2).
395 %\bibliography{biblio}
396 %\begin{thebibliography}{}
397
398 % \bibitem[Names(Year)]{label} or \bibitem[Names(Year)Long names]{label}.
399 % (\harvarditem{Name}{Year}{label} is also supported.)
400 % Text of bibliographic item
401
402 %\bibitem[]{}
403
404 %\end{thebibliography}
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