265 |
>> evaluated explicitly in time |
>> evaluated explicitly in time |
266 |
<- Leave it general. |
<- Leave it general. |
267 |
|
|
268 |
|
o Time-stepping outline |
269 |
|
- what gets called when |
270 |
|
|
271 |
|
|
272 |
2.2 rigid-lid: |
2.2 rigid-lid: |
273 |
|
|
417 |
3.14.5.4 -- ALL of the bold links to variable names are broken |
3.14.5.4 -- ALL of the bold links to variable names are broken |
418 |
line 34: link to equation is broken |
line 34: link to equation is broken |
419 |
|
|
420 |
|
o Update basic intro with one and four layer gyres |
421 |
|
- include advection options |
422 |
|
- conservation analysis |
423 |
|
- diagnostics |
424 |
|
|
425 |
|
o Four degree adjoint |
426 |
|
- both TAF and OpenAD based. |
427 |
|
|
428 |
|
o Coupled with biogeo setup |
429 |
|
- based on CCGS setup |
430 |
|
|
431 |
|
|
432 |
>>>> From Ed |
>>>> From Ed |
433 |
|
|
434 |
Here are the remaining bits for Chap 4 : |
Here are the remaining bits for Chap 4 : |
451 |
|
|
452 |
Chapter 6 |
Chapter 6 |
453 |
|
|
454 |
the master package diagram does not appear in the document |
the master package diagram does not appear in the document <- done |
455 |
|
(<- needs an update: e.g. atm2d, salt_plume, shelfice ...) |
456 |
|
|
457 |
Master list of packages (add this to beginning of chap 6) |
Master list of packages (add this to beginning of chap 6) |
458 |
|
(<- needs an update: e.g. atm2d, salt_plume, shelfice ...) |
459 |
|
|
460 |
admtlm/ - autodiff (chapter 5) |
admtlm/ - autodiff (chapter 5) |
461 |
aim/ - retired |
aim/ - retired |
482 |
exch2/ - 6.2.2 |
exch2/ - 6.2.2 |
483 |
exf/ - 6.3.4 |
exf/ - 6.3.4 |
484 |
fizhi/ - 6.4.3 |
fizhi/ - 6.4.3 |
485 |
|
o Including FIZHI doc |
486 |
|
- get things up to date |
487 |
flt/ - (PH check) |
flt/ - (PH check) |
488 |
gchem/ - 6.7.1 |
gchem/ - 6.7.1 |
489 |
generic_advdiff/ - in chapter 2 (JM check) |
generic_advdiff/ - in chapter 2 (JM check) |
529 |
timeave/ - retiring...... |
timeave/ - retiring...... |
530 |
zonal_filt/ - chapter 2 (JM to check) |
zonal_filt/ - chapter 2 (JM to check) |
531 |
|
|
532 |
|
o Cost function packages |
533 |
|
- floats, weights, profiles etc... |
534 |
|
|
535 |
|
|
536 |
list an expeiment which uses package? CNH |
list an expeiment which uses package? CNH |
537 |
|
|
538 |
6.3.1.7 Tapering: Large, Danabasoglu and Doney, JPO 1997 |
6.3.1.7 Tapering: Large, Danabasoglu and Doney, JPO 1997 |
545 |
- diagstat |
- diagstat |
546 |
- new temporal averaging feature |
- new temporal averaging feature |
547 |
|
|
548 |
|
+ update the RW / MDSIO description |
549 |
|
-> new meta file |
550 |
|
-> list all RW S/R that one should use instead of calling directly MDSIO |
551 |
|
|
552 |
+ add Graphix to the list of stuff in utils/matlab (Daniel) |
+ add Graphix to the list of stuff in utils/matlab (Daniel) |
553 |
|
|
554 |
+ get bathymetry pre-processing stuff from Patrick and then describe it |
+ get bathymetry pre-processing stuff from Patrick and then describe it |
555 |
|
|
556 |
+ add something on spgrid mesh generator |
+ add something on spgrid mesh generator |
557 |
|
o Grid generation |
558 |
|
- more explanation and some step-by-step examples |
559 |
|
- plotting grid examples |
560 |
|
|
561 |
|
|
562 |
+ add in gmaze PV calculation scripts plus write up on how it is calculated |
+ add in gmaze PV calculation scripts plus write up on how it is calculated |
563 |
http://mitgcm.org/cgi-bin/viewcvs.cgi/MITgcm_contrib/gmaze_pv/ |
http://mitgcm.org/cgi-bin/viewcvs.cgi/MITgcm_contrib/gmaze_pv/ |
573 |
10. Under development |
10. Under development |
574 |
|
|
575 |
Constantinos LCML |
Constantinos LCML |
576 |
|
o Legend/LCML examples and explanation |
577 |
|
- examples and explanation! |
578 |
|
|
579 |
|
|
580 |
|
|
581 |
Bibliography |
Bibliography |
582 |
|
|
583 |
tidy up from misc - .tex |
tidy up from misc - .tex |
584 |
|
|
585 |
|
Also |
586 |
|
|
587 |
|
a link to the new manual |
588 |
|
should appear on the front page (even if it's under construction). |
589 |
|
|
590 |
|
updating: |
591 |
|
http://mitgcm.org/r2_web_testing/latest/code_reference/callTree.html |
592 |
|
which points to a 1.5 years old code. Would be good to generate a |
593 |
|
new one, and even better, to try to keep it up-to-date. |
594 |
|
|