/[MITgcm]/manual/manual_todo.txt

Diff of /manual/manual_todo.txt

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-revision 1.11 by cnh,
Thu Apr  6 20:04:27 2006 UTC
+revision 1.16 by cnh,
Thu Apr  6 20:34:06 2006 UTC
 Line 14 
 o HTML, scripts and front content
    - pick a URL
      TBD
-   - mitgcm.org very front page.
-     o too many clicks to get to model manual.
-       make doc link go to mitgcm.org/r2_web_testing/latest
-       and add "HowTo" reference etc... to /latest page
    - mitgcm.org/r2_web_testing/latest
      o add another short-cut for quick download
-Line 298 
 in content: Horizontal Dissipation: 2 ti
+Line 293 
 in content: Horizontal Dissipation: 2 ti
    to add: mention the angle of the grid direction relative to
    Eastward, Northward direction.
    + mention horizGridFile= in file "data" (PARM04)
- - add cylindrical grid description
+ - add cylindrical polar grid description
     need to do a better job of relating model variables to this diagram
-Line 325 
 in content: Horizontal Dissipation: 2 ti
+Line 320 
 in content: Horizontal Dissipation: 2 ti
      o need to relate c11, c12 etc.. to COSFAC, USE_COS etc... flags
        in code need to explain why cos()3/2 turns out to be
        scaling (not cos()2)
+  - need to reference the smag/leith section.
 .13.6 Vertical dissipation
   - mention the implicit vertical viscosity option and ref to section 2.5
-Line 348 
 in content: Horizontal Dissipation: 2 ti
+Line 344 
 in content: Horizontal Dissipation: 2 ti
  - does not use std notation
  - would be better as an appendix of section 2.20:
  (e.g changing the tile to:
+ - talk to Baylor
   Appendix: non-dimensional Equations on Spherical-Polar grid.)
  JM
-Line 363 
 Almost all of the 'math mode' text is dr
+Line 361 
 Almost all of the 'math mode' text is dr
  divide chapter 3 more clearly into 2 sections?
     (ie, 3.1-3.6 are more informational, 3.8- 3.18 are examples, and
      then 3.19 and 3.20 are informational again - rearrange subsections?)
+ [DONE]
 .1 - don't need a link to the outside of the document (remove it)
      - link to htdig is broken
-Line 447 
 the verification directory
+Line 446 
 the verification directory
       offline - duplicate inputs, what is it, tidy up cfc v.
                 other offline. JM thinks these need tidying up.
+ Which of the following are which tutorial?
+ ! MLAdjust
+ adjust_nlfs.cs-32x32x1
+ aim.5l_XZ_Equatorial_Slice
+ biogeo
+ aim.5l_zon-ave
+ coupled_ucla
+ cfc_offline
+ exp3
+ global2x2_tot
+ global1x1_tot
+ global_ocean.cubed_wEXF
+ global_with_CFC11
+ goz
+ gop
+ natl_box_obcs
+ natl_box_forward
+ spinup_optim
+ tutorial_held_suarez_cs
+ vero
+ inverted_barometer
+ global_ocean.cubed32x32x30
+ exp1
+ advect_cs
+ dic_example
+ fizhi-gridalt-hs
+ global_ocean_pressure
+ matrix_example
+ exp4
+ solid-body.cs-32x32x1
+ cfc_example
+ flt_example
+ adjustment.cs-32x32x1
+ advect_xz
+ rotating_tank
+ ideal_2D_oce
+ global_ocean.90x40x15
+ front_relax
+ aim.5l_LatLon
+ lab_sea
+ hs94.cs-32x32x5
+ global_with_exf
+ exp2
+ tidal_basin_2d
+ fizhi-cs-32x32x10
+ exp5
+ global_ocean.cs32x15
+ OpenAD
+ hs94.1x64x5
+ fizhi-cs-aqualev10
+ exp0
+ dome
+ aim.5l_Equatorial_Channel
+ aim.5l_cs
+ hs94.128x64x5
+ prm
+ carbon
+ plume_on_slope
+ natl_box_adjoint
+ vermix
+ cpl_aim+ocn
+ global_ocean_ebm
+ internal_wave
+ advect_xy
+ natl_box
+ adjustment.128x64x1
  >>>> From Ed
  Here are the remaining bits for Chap 4 :
-  - The grammar/flow could still use some work.  Boo was an English
-    major and has experience editing/proofing technical papers.  I
-    could print out a copy and ask her to read it and suggest
-    improvements.
   - missing references (if you point me towards URLs, I'll add them
     to the bibliography):
       \ref{ref hoe and hill, ecmwf}
-Line 477 
 Chapter 6
+Line 539 
 Chapter 6
     the master package diagram does not appear in the document
     pkg/ptracers doesn't seem to have any documentation (see packages list below)
+                 martin volunteered - get martin to ask steph
  Master list of packages (add this to beginning of chap 6)
  admtlm/               - autodiff (chapter 5)
  aim/                  - retired
- aim_compon_interf/    - 6.6 (no content yet)
+ aim_compon_interf/    - 6.6 (no content yet)(Daniel + JM)
  aim_ocn_coupler/      - 6.6 (no content yet)
  aim_v23/              - 6.4.1 (content needs fixing - JM to do)
- atm_common/           - 6.6 (no content yet)
+ atm_common/           - nothing in this package (6.4.1 related)
  autodiff/             - autodiff (chapter 5)
  bulk_force/           - 6.3.3
  cal/                  - 6.3.5
- cd_code/              - chapter 2 (JM check)
+ cd_code/              - chapter 2 (JM check add a reference to paper,
- cfc/                  - not sure
+                           mention parameter in data)
- chronos/              - AM to check
+ cfc/                  - not sure  (CNH to talk to Steph and Helen)
- compon_communic/      - 6.6 (no content yet)
+ chronos/              - AM to check (not being used - Andrea to kill it)
+ compon_communic/      - 6.6 (no content yet)(Daniel + JM)
  cost/                 - not sure, check with PH
  ctrl/                 - not sure, check with PH
  debug/                - JM may do something in chapter 7 (utilities)
  diagnostics/          - 7.1
  dic/                  - 6.7.2
- ebm/                  - not sure
+ ebm/                  - (check with PH)
  ecco/                 - chapter 8
  embed_files/          - add something to chapter 7
- ex3/                  - rename to exch3
+ ex3/                  - move to contrib (EH)
  exch2/                - 6.2.2
  exf/                  - 6.3.4
  fizhi/                - 6.4.3

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