| 205 | o coupled aqua, ridge world etc... | o coupled aqua, ridge world etc... | 
| 206 | - links to ingrid output | - links to ingrid output | 
| 207 | get stuff from Daniel | get stuff from Daniel | 
| 208 |  | Davids donut movie | 
| 209 |  |  | 
| 210 | o constrained lab simulation | o constrained lab simulation | 
| 211 | - links to ingrid output for model and lab | - links to ingrid output for model and lab | 
| 233 | - would be nice to have an active link to the fortran-file | - would be nice to have an active link to the fortran-file | 
| 234 | for all the S/R & eq.Number in the "calling-tree" boxes | for all the S/R & eq.Number in the "calling-tree" boxes | 
| 235 | - search for CALC_MOM_RHS and replace it by the appropriate S/R | - search for CALC_MOM_RHS and replace it by the appropriate S/R | 
| 236 | (mom_flux_form, mom_vecinv, dynamics) | (mom_flux_form, mom_vecinv, dynamics) <- DONE | 
| 237 | - Problem with notation: in section.1 \vec{\bf v_h} (or \vec{\mathbf{v}}_{h}) | - Problem with notation: in section.1 \vec{\bf v_h} (or \vec{\mathbf{v}}_{h}) | 
| 238 | was used for the horizontal velocity vector, and the 3.D vector was \vec{\mathbf{v}} | was used for the horizontal velocity vector, and the 3.D vector was \vec{\mathbf{v}} | 
| 239 | in section.2, \vec{\bf v} is used instead and 3.D velocity vector is | in section.2, \vec{\bf v} is used instead and 3.D velocity vector is | 
| 244 | the 2 sections. | the 2 sections. | 
| 245 |  |  | 
| 246 | in content: Horizontal Dissipation: 2 times in vector-invariant section | in content: Horizontal Dissipation: 2 times in vector-invariant section | 
| 247 |  | <- DONE | 
| 248 |  |  | 
| 249 | 2.1 time-stepping (part2/time_stepping.tex) | 2.1 time-stepping (part2/time_stepping.tex) | 
| 250 |  |  | 
| 253 | >> In all the above configurations it is also possible to substitute the | >> In all the above configurations it is also possible to substitute the | 
| 254 | >> Adams-Bashforth with an alternative time-stepping scheme for terms | >> Adams-Bashforth with an alternative time-stepping scheme for terms | 
| 255 | >> evaluated explicitly in time | >> evaluated explicitly in time | 
| 256 |  | <- Leave it general. | 
| 257 |  |  | 
| 258 |  |  | 
| 259 | 2.2 rigid-lid: | 2.2 rigid-lid: | 
| 287 | - add link & S/R names: CALC_GW, SOLVE_FOR_PRESSURE, CG3D | - add link & S/R names: CALC_GW, SOLVE_FOR_PRESSURE, CG3D | 
| 288 |  |  | 
| 289 | 2.9 Variants on Free-Surface | 2.9 Variants on Free-Surface | 
| 290 | - Delta.t mis-written (eq.2.73) | - Delta.t mis-written (eq.2.73) <- DONE | 
| 291 | - Eq.Num missing (has been fixed since) | - Eq.Num missing <- DONE | 
| 292 | - u* is stored in gU (and not in gUnm1) | - u* is stored in gU (and not in gUnm1) <- DONE | 
| 293 | - Phi_nh in NH_VARS.h | - Phi_nh in NH_VARS.h <- DONE | 
| 294 | - add link to S/R file: SOLVE_FOR_PRESSURE, CALC_DIV_GHAT, CG2D, CG3D, | - add link to S/R file: SOLVE_FOR_PRESSURE, CALC_DIV_GHAT, CG2D, CG3D, | 
| 295 | INI_CG2D, INI_CG3D | INI_CG2D, INI_CG3D | 
| 296 |  |  | 
| 300 | 2.9.2 NLFS | 2.9.2 NLFS | 
| 301 | - eq.Nb are wrong in html | - eq.Nb are wrong in html | 
| 302 | - 2.9.2.4 : set of eq. appears wrong in html (but right in .dvi) | - 2.9.2.4 : set of eq. appears wrong in html (but right in .dvi) | 
| 303 |  | <- DONE | 
| 304 |  |  | 
| 305 | 2.10.1 Notation | 2.10.1 Notation | 
| 306 | - Area definition is not really used like this | - Area definition is not really used like this | 
| 309 |  |  | 
| 310 | Instead, in the following section, Ac,Aw,As,A_zeta (= corresponding to | Instead, in the following section, Ac,Aw,As,A_zeta (= corresponding to | 
| 311 | the model variables) are used (e.g., see section 2.10.5) | the model variables) are used (e.g., see section 2.10.5) | 
| 312 |  | <- DONE | 
| 313 |  |  | 
| 314 | 2.10.5 Horizontal grid: | 2.10.5 Horizontal grid: | 
| 315 | - fig.2.8 : should use Aw,As consistently in this figure description, | - fig.2.8 : should use Aw,As consistently in this figure description, | 
| 316 | in the figure itself, as it is in the text. | in the figure itself, as it is in the text. <- DONE | 
| 317 | - curvilinear: | - curvilinear: | 
| 318 | to add: mention the angle of the grid direction relative to | to add: mention the angle of the grid direction relative to | 
| 319 | Eastward, Northward direction. | Eastward, Northward direction. | 
| 364 |  |  | 
| 365 | 2.16 & 2.17 & 2.18 : | 2.16 & 2.17 & 2.18 : | 
| 366 | - add 1rst Order upwind option & DST-2 (Lax-Wendroff) options | - add 1rst Order upwind option & DST-2 (Lax-Wendroff) options | 
| 367 | - fix equations 2.202 & 2.203 (thanks to Martin) | - fix equations 2.202 & 2.203 (thanks to Martin) <- DONE | 
| 368 |  |  | 
| 369 | 2.20.2 mercator, non-dimensional Equations: | 2.20.2 mercator, non-dimensional Equations: | 
| 370 | - does not use std notation | - does not use std notation | 
| 372 | (e.g changing the tile to: | (e.g changing the tile to: | 
| 373 | - talk to Baylor | - talk to Baylor | 
| 374 | Appendix: non-dimensional Equations on Spherical-Polar grid.) | Appendix: non-dimensional Equations on Spherical-Polar grid.) | 
| 375 |  | <- No (Chris said) | 
| 376 |  |  | 
| 377 |  |  | 
| 378 | Diagrams of grid locations etc.... and what variables and output files | Diagrams of grid locations etc.... and what variables and output files | 
| 643 | 7.5.2 - get bathymetry pre-processing stuff from Patrick | 7.5.2 - get bathymetry pre-processing stuff from Patrick | 
| 644 | and then describe it | and then describe it | 
| 645 |  |  | 
| 646 |  | add something on spgrid mesh generator (maybe)? | 
| 647 |  |  | 
| 648 |  |  | 
| 649 | andrea | andrea | 
| 650 |  |  |