/[MITgcm]/manual/manual_todo.txt

Diff of /manual/manual_todo.txt

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-revision 1.17 by edhill,
Thu Apr  6 20:38:43 2006 UTC
+revision 1.29 by molod,
Wed Apr 19 22:44:49 2006 UTC
 Line 25 
 o HTML, scripts and front content
        Tutorials (broken)
        Browse Code
-     o mitgcm.org (front content) [DONE]
-       Get Code (where does this go to?)
-       get rid of * CVS current bullet
-       make HTML-enabled CVS code browser leap to MITgcm/MITgcm
-     o authors
-       John, Alistair, Jean-Michel, Patrick, Andrea, Steph, Helen,
-       Martin, Baylor, Dimitris, David, Ed, Mick, Chris, Constantinos,
-       Gael - others?
      o words on http://mitgcm.org/r2_web_testing/latest
        change to
         "access on-line Auser manual/A and Atable of contents/A
-Line 358 
 Chapter 3
+Line 348 
 Chapter 3
  Almost all of the 'math mode' text is dropped down as subscripts
- divide chapter 3 more clearly into 2 sections?
-    (ie, 3.1-3.6 are more informational, 3.8- 3.18 are examples, and
-     then 3.19 and 3.20 are informational again - rearrange subsections?)
- [DONE]
 .1 - don't need a link to the outside of the document (remove it)
      - link to htdig is broken
-Line 408 
 divide chapter 3 more clearly into 2 sec
+Line 393 
 divide chapter 3 more clearly into 2 sec
          are written.
 .6.1.2 - needs to be moved to inside section 3.6.2
-.7 - this section is superfluous - remove it -OR- put the tutorial sections (3.8-3.18)
-       underneath this one and leave the text for 3.7 in place
  All the 'overview' sections need some reference to the name of the experiment in
  the verification directory
-Line 538 
 Chapter 6
+Line 520 
 Chapter 6
     the master package diagram does not appear in the document
-    pkg/ptracers doesn't seem to have any documentation (see packages list below)
-                 martin volunteered - get martin to ask steph
  Master list of packages (add this to beginning of chap 6)
  admtlm/               - autodiff (chapter 5)
-Line 569 
 embed_files/          - add something to
+Line 547 
 embed_files/          - add something to
  exch2/                - 6.2.2
  exf/                  - 6.3.4
  fizhi/                - 6.4.3
- flt/                  - in chapter 2 (JM check)
+ flt/                  - (PH check)
  gchem/                - 6.7.1
  generic_advdiff/      - in chapter 2 (JM check)
  ggl90/                - nothing, (Martin?)
  gmredi/               - in chapter 2 (JM check). also need
-                         Ferrari & Mc tapering
+                         Ferrari & Mc transition zone stuff (Samar doing this)
+                         get dfer to read this
  grdchk/               - grdchk (chapter 5 - check with PH)
  gridalt/              - 6.2.4
  kpp/                  - 6.3.2
- land/                 - 6.4.2 (not connected to code - JM to fix)
+ land/                 - 6.4.2 (not connected to code Rong's notes - JM to fix)
  matrix/               - Samar
  mdsio/                - 7.3.1
  mnc/                  - 7.2.1
-Line 587 
 mom_fluxform/         - in chapter 2 (JM
+Line 566 
 mom_fluxform/         - in chapter 2 (JM
  mom_vecinv/           - in chapter 2 (JM check)
  monitor/              - 7.4
  my82/                 - nothing, (martin?)
- obcs/                 - 6.3 (needs a check)
+ obcs/                 - 6.3 (needs a check - ask PH to read)
  ocn_compon_interf/    - 6.6 (no content yet)
  offline/              - nothing, tutorials that need work but no package   section entry
+                         trivial to document (CNH to do)
  opps/                 - nothing, (martin?)
  pp81/                 - nothing, (martin?)
  profiles/             - GAEL
- ptracers/             - JM + SD to write something
+ ptracers/             - JM + SD + Martin to write something (nothing for this
- rbcs/                 - talk to steph
+                           at the moment)
- runclock/             - runclock
+                         AM has diagnostics table for this.
- rw/                   - not sure
+ rbcs/                 - CNH to talk to steph
+ runclock/             - runclock - CNH
+ rw/                   - not sure - going to stay says JMC. quick IO calls
+                         JMC to write a quick note for that.
  sbo/                  - text in sbo_descruption.tex but not linked into
-                         part6
+                         part6 - CNH
  seaice/               - 6.5.2 - no equations, dimitris has promised some
  shap_filt/            - chapter 2, JM to check
  shelfice/             - nothing yet (martin?)
- solver/               - empty
+ solver/               - empty (go away?)
  sphere/               - chapter 5 or 8 (PH to check)
- therm_seaice/         - empty
+ therm_seaice/         - empty (go away?)
  thsice/               - 6.5.1 (JM to update?)
  timeave/              - retiring......
  zonal_filt/           - chapter 2 (JM to check)
- Possible for chap 7 - Daniels grafix/ stuff
+ list an expeiment which uses package? CNH
- Need to get packages to contain their available diagnostics (i.e. calls to DIAGNOSTICS_ADD). these are listed in stdout when pacakages are started.
- Figure 6.8 is missing
 .3.1.7 Tapering: Large, Danabasoglu and Doney, JPO 1997
   Figure 6.8 is missing
-Line 634 
 to do list for chap 7:
+Line 613 
 to do list for chap 7:
  andrea
-. Model uses
+. Publications using MITgcm --> "Previous Applications of MITgcm"
     Spall, Gianmaria, Legg, Dewar, Cessi, Cournelle, Follows, Adcroft, etc...
     (check in support for more names)
+. Under development
+ Bibliography
+  tidy up from misc - .tex

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