/[MITgcm]/manual/manual_todo.txt
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revision 1.14 by edhill, Thu Apr 6 20:14:48 2006 UTC revision 1.17 by edhill, Thu Apr 6 20:38:43 2006 UTC
# Line 320  in content: Horizontal Dissipation: 2 ti Line 320  in content: Horizontal Dissipation: 2 ti
320      o need to relate c11, c12 etc.. to COSFAC, USE_COS etc... flags      o need to relate c11, c12 etc.. to COSFAC, USE_COS etc... flags
321        in code need to explain why cos()3/2 turns out to be        in code need to explain why cos()3/2 turns out to be
322        scaling (not cos()2)        scaling (not cos()2)
323     - need to reference the smag/leith section.
324    
325  2.13.6 Vertical dissipation  2.13.6 Vertical dissipation
326   - mention the implicit vertical viscosity option and ref to section 2.5   - mention the implicit vertical viscosity option and ref to section 2.5
# Line 360  Almost all of the 'math mode' text is dr Line 361  Almost all of the 'math mode' text is dr
361  divide chapter 3 more clearly into 2 sections?  divide chapter 3 more clearly into 2 sections?
362     (ie, 3.1-3.6 are more informational, 3.8- 3.18 are examples, and     (ie, 3.1-3.6 are more informational, 3.8- 3.18 are examples, and
363      then 3.19 and 3.20 are informational again - rearrange subsections?)      then 3.19 and 3.20 are informational again - rearrange subsections?)
364    [DONE]
365    
366  3.1 - don't need a link to the outside of the document (remove it)  3.1 - don't need a link to the outside of the document (remove it)
367      - link to htdig is broken      - link to htdig is broken
# Line 444  the verification directory Line 446  the verification directory
446    
447       offline - duplicate inputs, what is it, tidy up cfc v.       offline - duplicate inputs, what is it, tidy up cfc v.
448                 other offline. JM thinks these need tidying up.                 other offline. JM thinks these need tidying up.
449    
450    Which of the following are which tutorial?
451    ! MLAdjust
452    adjust_nlfs.cs-32x32x1
453    aim.5l_XZ_Equatorial_Slice
454    biogeo
455    aim.5l_zon-ave
456    coupled_ucla
457    cfc_offline
458    exp3
459    global2x2_tot
460    global1x1_tot
461    global_ocean.cubed_wEXF
462    global_with_CFC11
463    goz
464    gop
465    natl_box_obcs
466    natl_box_forward
467    spinup_optim
468    tutorial_held_suarez_cs
469    vero
470    inverted_barometer
471    global_ocean.cubed32x32x30
472    exp1
473    advect_cs
474    dic_example
475    fizhi-gridalt-hs
476    global_ocean_pressure
477    matrix_example
478    exp4
479    solid-body.cs-32x32x1
480    cfc_example
481    flt_example
482    adjustment.cs-32x32x1
483    advect_xz
484    rotating_tank
485    ideal_2D_oce
486    global_ocean.90x40x15
487    front_relax
488    aim.5l_LatLon
489    lab_sea
490    hs94.cs-32x32x5
491    global_with_exf
492    exp2
493    tidal_basin_2d
494    fizhi-cs-32x32x10
495    exp5
496    global_ocean.cs32x15
497    OpenAD
498    hs94.1x64x5
499    fizhi-cs-aqualev10
500    exp0
501    dome
502    aim.5l_Equatorial_Channel
503    aim.5l_cs
504    hs94.128x64x5
505    prm
506    carbon
507    plume_on_slope
508    natl_box_adjoint
509    vermix
510    cpl_aim+ocn
511    global_ocean_ebm
512    internal_wave
513    advect_xy
514    natl_box
515    adjustment.128x64x1
516    
517  >>>> From Ed  >>>> From Ed
518    
519  Here are the remaining bits for Chap 4 :  Here are the remaining bits for Chap 4 :
520    
  - The grammar/flow could still use some work.  Boo was an English  
    major and has experience editing/proofing technical papers.  I  
    could print out a copy and ask her to read it and suggest  
    improvements.  
   
521   - missing references (if you point me towards URLs, I'll add them   - missing references (if you point me towards URLs, I'll add them
522     to the bibliography):     to the bibliography):
523       \ref{ref hoe and hill, ecmwf}       \ref{ref hoe and hill, ecmwf}
# Line 474  Chapter 6 Line 539  Chapter 6
539     the master package diagram does not appear in the document     the master package diagram does not appear in the document
540    
541     pkg/ptracers doesn't seem to have any documentation (see packages list below)     pkg/ptracers doesn't seem to have any documentation (see packages list below)
542                    martin volunteered - get martin to ask steph
543    
544    
545  Master list of packages (add this to beginning of chap 6)  Master list of packages (add this to beginning of chap 6)
546    
547  admtlm/               - autodiff (chapter 5)  admtlm/               - autodiff (chapter 5)
548  aim/                  - retired  aim/                  - retired
549  aim_compon_interf/    - 6.6 (no content yet)  aim_compon_interf/    - 6.6 (no content yet)(Daniel + JM)
550  aim_ocn_coupler/      - 6.6 (no content yet)  aim_ocn_coupler/      - 6.6 (no content yet)
551  aim_v23/              - 6.4.1 (content needs fixing - JM to do)  aim_v23/              - 6.4.1 (content needs fixing - JM to do)
552  atm_common/           - 6.6 (no content yet)  atm_common/           - nothing in this package (6.4.1 related)
553  autodiff/             - autodiff (chapter 5)  autodiff/             - autodiff (chapter 5)
554  bulk_force/           - 6.3.3  bulk_force/           - 6.3.3
555  cal/                  - 6.3.5  cal/                  - 6.3.5
556  cd_code/              - chapter 2 (JM check)  cd_code/              - chapter 2 (JM check add a reference to paper,
557  cfc/                  - not sure                            mention parameter in data)
558  chronos/              - AM to check  cfc/                  - not sure  (CNH to talk to Steph and Helen)
559  compon_communic/      - 6.6 (no content yet)  chronos/              - AM to check (not being used - Andrea to kill it)
560    compon_communic/      - 6.6 (no content yet)(Daniel + JM)
561  cost/                 - not sure, check with PH  cost/                 - not sure, check with PH
562  ctrl/                 - not sure, check with PH  ctrl/                 - not sure, check with PH
563  debug/                - JM may do something in chapter 7 (utilities)  debug/                - JM may do something in chapter 7 (utilities)
564  diagnostics/          - 7.1  diagnostics/          - 7.1
565  dic/                  - 6.7.2  dic/                  - 6.7.2
566  ebm/                  - not sure  ebm/                  - (check with PH)
567  ecco/                 - chapter 8  ecco/                 - chapter 8
568  embed_files/          - add something to chapter 7  embed_files/          - add something to chapter 7
 ex3/                  - rename to exch3  
569  exch2/                - 6.2.2  exch2/                - 6.2.2
570  exf/                  - 6.3.4  exf/                  - 6.3.4
571  fizhi/                - 6.4.3  fizhi/                - 6.4.3
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