--- manual/manual_references.bib	2006/07/18 04:13:49	1.30
+++ manual/manual_references.bib	2008/01/17 21:28:22	1.33
@@ -131,6 +131,17 @@
  pages		= {1367--1387},
 		  }
 
+@ARTICLE{durr:91,
+  author = {Dale R. Durran},
+  title = {The Third-Order Adams-Bashforth Method: An Attractive Alternative
+           to Leapfrog Time Differencing},
+  journal = mwr,
+  year = {1991},
+  volume = {119},
+  pages  = {702-720},
+}
+ 
+
 @ARTICLE{dutk-etal:06,
   author = {S. Dutkiewicz and M.J. Follows and P. Heimbach and J. Marshall},
   title = {Controls on ocean productivity and air-sea carbon flux:
@@ -381,6 +392,15 @@
  pages          = {658-669}
 		  }
 
+@Article{jam-oze:86,
+ author		= {B.M. Jamart and J. Ozer}, 
+ year		= {1986},
+ title		= {Numerical boundary layers and spurious residual flows}, 
+ journal	= jgr,
+ volume         = {91},
+ pages          = {10,621-10,631}
+		  }
+
 @book{kas-eta:00,
  author		= {P. Kasibhatla and M. Heimann and P. Rayner and
                   N. Mahowald and R.G. Prinn and D.E. Hartley},
@@ -534,7 +554,7 @@
  pages		= {5,753--5,766},
 		  }
  
-@Article{mars-sha:98,
+@Article{mars-eta:98,
  author		= {J. Marshall and H. Jones and C. Hill},
  year		= 1998,
  title		= {Efficient ocean modeling using
@@ -564,6 +584,15 @@
 %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are 
 %%   also available.
 
+@incollection{naum-etal:06,
+	Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},
+	Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},
+	Editor = {{P. Wesseling, E. O~nate and J. Periaux}},
+	Pages = {~},
+	Publisher = {TU Delft},
+	Title = {Adjoint code by source transformation with OpenAD/F},
+	Year = {2006}}
+
 @TechReport{rew:97,
   author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
   title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90}, 
@@ -610,6 +639,15 @@
  address	= {Berlin (Germany)},
 		  }
 
+@article{utke-etal:08,
+	Author = {J. Utke and U. Naumann and M. Fagan and N. Tallent and M. Strout and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch},
+	Date-Modified = {2007-11-19 10:15:08 -0500},
+	Journal = {{ACM} Transactions on Mathematical Software},
+	Pages = {~},
+	Title = {OpenAD/F: A modular open source tool for automatic differentiation of Fortran codes},
+	Volume = {34(4)},
+	Year = {2008}}
+
 @Article{DaSilva94,
  author		= {A. da Silva and A. C. Young and S. Levitus},
  year		= 1994,
@@ -622,7 +660,7 @@
  url            = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
 		  }
  
-@techreport{sta-eta:97,
+@techreport{stam-etal:97,
  author		= {D. Stammer and C. Wunsch and R. Giering and
                   Q. Zhang and J. Marotzke and J. Marshall and
                   C. Hill},
@@ -638,7 +676,7 @@
  address	= {Cambridge (MA), USA},
 		  }
  
-@ARTICLE{stam-eta:01,
+@ARTICLE{stam-etal:02,
   author = {D. Stammer and C. Wunsch and R. Giering and C. Eckert and P. Heimbach and J. Marotzke and A. Adcroft and C.N. Hill and J. Marshall},
   title = {The global ocean circulation and transports during 1992 -- 1997, estimated from ocean observations and a general circulation model.},
   journal = jgr,
@@ -864,6 +902,19 @@
   doi     =      {10.1175/MWR2823.1},
 }
 
+@inproceedings{adcroft:04c,
+  author = 	 {Adcroft, A. and C. Hill and J.-M. Campin and J. Marshall 
+                  and P. Heimbach},
+  title = 	 {Overview of the Formulation and Numerics of the MIT GCM},
+  booktitle =   {Proceedings of the ECMWF seminar series on Numerical Methods,
+                 Recent developments in numerical methods for atmosphere and 
+                 ocean modelling},
+  year = 	 2004,
+  pages =	 {139-149},
+  url   =        {http://mitgcm.org/pdfs/ECMWF2004-Adcroft.pdf},
+ publisher =     ecmwf
+}
+
 @Article{marshall:04,
   author = 	 {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White},
   title = 	 {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms},