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1 @string{arfm = {Annu.~Rev.~Fluid Mech.}}
2 @string{bams = {Bull.~Am.~Met.~Soc.}}
3 @string{blm = {Bound.~Layer~Meteorol.}}
4 @string{climd = {Clim.~Dynamics}}
5 @string{jgr = {J.~Geophys.~Res.}}
6 @string{ijrs = {Int.~J.~Remote Sensing}}
7 @string{jas = {J.~Atmos.~Sci.}}
8 @string{jam = {J.~Appl.~Meteor.}}
9 @string{jpo = {J.~Phys.~Oceanogr.}}
10 @string{jclim = {J.~Clim.}}
11 @string{jcp = {J.~Comput.~Phys.}}
12 @string{ieee = {IEEE Trans.~Geosci. Remote Sensing}}
13 @string{jfm = {J.~Fluid Mech.}}
14 @string{jaot = {J.~Atmos.~Ocean.~Technol.}}
15 @string{jms = {J.~Mar.~Sys.}}
16 @string{om = {Ocean Modelling}}
17 @string{gaos = {Global Atmos.~Ocean System}}
18 @string{grl = {Geophys.~Res.~Lett.}}
19 @string{dsr = {Deep Sea Res.}}
20 @string{dao = {Dyn.~Atmos.~Oceans}}
21 @string{mwr = {Mon.~Wea.~Rev.}}
22 @string{qjrms = {{Q.~J.~R.~Meteorol.~Soc.}}}
23 @string{tel = {Tellus}}
24 @string{cup = {Cambridge University Press}}
25 @string{esapub = {ESA Publications Division, ESTEC, Noordwijk (NL)}}
26 @string{ifremer = {IFREMER/CERSAT}}
27 @string{igarss = {IEEE Press, Piscataway, N.J., USA}}
28 @string{dnmi = {The Norwegian Meteorological Institute (DNMI)}}
29 @string{dkrz = {Deutsches Klimarechenzentrum (DKRZ)}}
30 @string{mpi = {MPI f\"ur Meteorologie}}
31 @string{ecmwf = {ECMWF}}
32 @string{estec = {European Space Research and Technology Centre
33 (ESTEC)}}
34 @string{esa = {European Space Agency (ESA)}}
35
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40 title = {Automatic differentiation of advanced GFD codes
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44 pages = {625--638},
45 }
46
47 @incollection{bis:94,
48 author = {C.H. Bishof},
49 year = 1994,
50 title = {Automatic differentiation, tangent linear models
51 and pseudo-adjoints},
52 booktitle = {High Performance Computing in the Geosciences},
53 series = {Series C: Mathematical and Physical Sciences},
54 pages = {59--80},
55 editor = {F.X. {Le Dimet}},
56 publisher = {Kluwer},
57 address = {Dordrecht, NL},
58 }
59
60 @techreport{bis-eta:94,
61 author = {C. Bishof and A. Carle and P. Khademi and
62 A. Maurer},
63 year = 1994,
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65 differentiation of FORTRAN 77 programs},
66 institution = {Argonne National Laboratory, Mathematics and
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68 type = {Argonne Preprint},
69 number = {ANL-MCS-P981-1194},
70 address = {ANL; 9700 South Cass Ave.;
71 Argonne (ILL), 90439; USA},
72 note = {http://www.mcs.anl.gov/autodiff/},
73 }
74
75 @ARTICLE{bugi-hill:06,
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77 title = {Equilibration mechanisms in an adjoint ocean general
78 circulation model},
79 journal = {Ocean Dynamics},
80 year = {2006},
81 volume = {56},
82 number = {1},
83 pages = {51-61},
84 doi = {10.1007/s10236-005-0052-z},
85 }
86
87 @techreport{bis-roh:97,
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89 year = 1997,
90 title = {ADIC: An extensible automatic differentiation tool
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92 institution = {Argonne National Laboratory, Mathematics and
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94 type = {Argonne Preprint},
95 number = {ANL-MCS-P626-1196},
96 address = {ANL; 9700 South Cass Ave.;
97 Argonne (ILL), 90439; USA},
98 note = {http://www.mcs.anl.gov/autodiff/},
99 }
100
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102 author = {P. Courtier and O. Talagrand},
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104 title = {Variational assimilation of meteorological
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129 journal = qjrms,
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188 title = {Generalized stability theory. Part I:
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201 type = {Rapport Technique},
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203 address = {INRIA; 2004, route des Luciolis, B.P. 93;
204 06902 Sophia Antipolis Cedex; France},
205 note = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},
206 }
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213 note = {in press},
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215
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223 }
224
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227 and J.C. McWilliams},
228 year = 1995,
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231 journal = jpo,
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234 }
235
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238 year = 1998,
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240 journal = {ACM Transactions on Mathematical Software},
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243 }
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250 institution = {Massachusetts Institute of Technology},
251 type = {Report},
252 number = {~},
253 address = {MIT/EAPS; 77 Massachusetts Ave.; Cambridge (MA)
254 02139; USA},
255 note = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},
256 }
257
258 @incollection{gie:00,
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262 year = 2000,
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264 title = {Tangent linear and adjoint biogeochemical models},
265 publisher = {American Geophysical Union},
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267 volume = {114},
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270 }
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297 pages = {83--108},
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302
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317 year = 2000,
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360 journal = {Global Biogeochemical Cycles},
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366 TITLE = "Modeling a Variable Thickness Sea Ice Cover",
367 JOURNAL = mwr,
368 YEAR = 1980,
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406 N. Mahowald and R.G. Prinn and D.E. Hartley},
407 year = 2000,
408 title = {Inverse methods in global biogeochemical cycles},
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448
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450 author = {S. Levitus and T.P.Boyer},
451 title = {{World Ocean Atlas 1994 Volume 3: Salinity}},
452 institution = {NOAA Atlas NESDIS 3},
453 year = 1994,
454 OPTkey = {},
455 OPTtype = {},
456 OPTnumber = {},
457 OPTaddress = {U.S. Department of Commerce, Washington D.C.},
458 OPTmonth = {},
459 OPTnote = {},
460 OPTannote = {}
461 }
462
463
464 @TechReport{Levitus94,
465 author = {S. Levitus and T.P.Boyer},
466 title = {{World Ocean Atlas 1994 Volume 4: Temperature}},
467 institution = {NOAA Atlas NESDIS 4},
468 year = 1994,
469 OPTkey = {},
470 OPTtype = {},
471 OPTnumber = {},
472 OPTaddress = {U.S. Department of Commerce, Washington D.C.},
473 OPTmonth = {},
474 OPTnote = {},
475 OPTannote = {}
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494 institution = {Delft Hydraulics},
495 type = {Report},
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499 }
500
501 @ARTICLE{losc-heim:06,
502 author = {M. Losch and P. Heimbach},
503 title = {Adjoint sensitivity of an ocean general circulation model
504 to bottom topography},
505 journal = jpo,
506 year = {2006},
507 volume = {{in press}},
508 url = {http://mitgcm.org/pdfs/Los2006a.pdf},
509 }
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531 volume = {104, C12},
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534
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542 volume = {102, C3},
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545
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547 author = {J. Marshall and A. Adcroft and C. Hill and
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550 title = {Hydrostatic, quasi-hydrostatic and
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560 title = {Efficient ocean modeling using
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564 pages = {115--134},
565 url = {http://mitgcm.org/pdfs/journal_of_marine_systems_1998.pdf},
566 doi = {10.1016/S0924-7963\%2898\%2900008-6},
567 }
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577
578 %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
579 %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.
580 %% (Available from Unidata or in PostScript form by anonymous FTP from
581 %% ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also
582 %% a hypertext version of the User's Guide available at
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584 %% Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are
585 %% also available.
586
587 @incollection{naum-etal:06,
588 Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},
589 Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},
590 Editor = {{P. Wesseling, E. O~nate and J. Periaux}},
591 Pages = {~},
592 Publisher = {TU Delft},
593 Title = {Adjoint code by source transformation with OpenAD/F},
594 Year = {2006}}
595
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598 title = {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},
599 An Interface for Data Access, Version 3},
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636 volume = {C 284},
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642 @article{utke-etal:08,
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644 Date-Modified = {2007-11-19 10:15:08 -0500},
645 Journal = {{ACM} Transactions on Mathematical Software},
646 Pages = {~},
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650
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658 address = {Washington, D.C. (USA)},
659 note = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
660 url = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
661 }
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675 pages = {40 pp.},
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