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1 @string{arfm = {Annu.~Rev.~Fluid Mech.}}
2 @string{bams = {Bull.~Am.~Met.~Soc.}}
3 @string{blm = {Bound.~Layer~Meteorol.}}
4 @string{climd = {Clim.~Dynamics}}
5 @string{jgr = {J.~Geophys.~Res.}}
6 @string{ijrs = {Int.~J.~Remote Sensing}}
7 @string{jas = {J.~Atmos.~Sci.}}
8 @string{jpo = {J.~Phys.~Oceanogr.}}
9 @string{jclim = {J.~Clim.}}
10 @string{ieee = {IEEE Trans.~Geosci. Remote Sensing}}
11 @string{jfm = {J.~Fluid Mech.}}
12 @string{jaot = {J.~Atmos.~Ocean.~Technol.}}
13 @string{jms = {J.~Mar.~Sys.}}
14 @string{om = {Ocean Modelling}}
15 @string{gaos = {Global Atmos.~Ocean System}}
16 @string{grl = {Geophys.~Res.~Lett.}}
17 @string{dsr = {Deep Sea Res.}}
18 @string{dao = {Dyn.~Atmos.~Oceans}}
19 @string{mwr = {Mon.~Wea.~Rev.}}
20 @string{qjrms = {{Q.~J.~R.~Meteorol.~Soc.}}}
21 @string{tel = {Tellus}}
22 @string{cup = {Cambridge University Press}}
23 @string{esapub = {ESA Publications Division, ESTEC, Noordwijk (NL)}}
24 @string{ifremer = {IFREMER/CERSAT}}
25 @string{igarss = {IEEE Press, Piscataway, N.J., USA}}
26 @string{dnmi = {The Norwegian Meteorological Institute (DNMI)}}
27 @string{dkrz = {Deutsches Klimarechenzentrum (DKRZ)}}
28 @string{mpi = {MPI f\"ur Meteorologie}}
29 @string{ecmwf = {ECMWF}}
30 @string{estec = {European Space Research and Technology Centre
31 (ESTEC)}}
32 @string{esa = {European Space Agency (ESA)}}
33
34 @Article{bis-eta:92,
35 author = {C.H. Bishof and G.F. Corliss and L. Green and
36 A. Griewank and K. Haigler and P. Newman},
37 year = 1992,
38 title = {Automatic differentiation of advanced GFD codes
39 for multidisciplinary design},
40 journal = {Journal on Computing Systems in Engineering},
41 volume = {3},
42 pages = {625--638},
43 }
44
45 @incollection{bis:94,
46 author = {C.H. Bishof},
47 year = 1994,
48 title = {Automatic differentiation, tangent linear models
49 and pseudo-adjoints},
50 booktitle = {High Performance Computing in the Geosciences},
51 series = {Series C: Mathematical and Physical Sciences},
52 pages = {59--80},
53 editor = {F.X. {Le Dimet}},
54 publisher = {Kluwer},
55 address = {Dordrecht, NL},
56 }
57
58 @techreport{bis-eta:94,
59 author = {C. Bishof and A. Carle and P. Khademi and
60 A. Maurer},
61 year = 1994,
62 title = {The ADIFOR 2.0 system for the automatic
63 differentiation of FORTRAN 77 programs},
64 institution = {Argonne National Laboratory, Mathematics and
65 Computer Science Division},
66 type = {Argonne Preprint},
67 number = {ANL-MCS-P981-1194},
68 address = {ANL; 9700 South Cass Ave.;
69 Argonne (ILL), 90439; USA},
70 note = {http://www.mcs.anl.gov/autodiff/},
71 }
72
73 @techreport{bis-roh:97,
74 author = {C. Bishof and L. Roh},
75 year = 1997,
76 title = {ADIC: An extensible automatic differentiation tool
77 for ANSI-C},
78 institution = {Argonne National Laboratory, Mathematics and
79 Computer Science Division},
80 type = {Argonne Preprint},
81 number = {ANL-MCS-P626-1196},
82 address = {ANL; 9700 South Cass Ave.;
83 Argonne (ILL), 90439; USA},
84 note = {http://www.mcs.anl.gov/autodiff/},
85 }
86
87 @Article{cou-tal:87,
88 author = {P. Courtier and O. Talagrand},
89 year = 1987,
90 title = {Variational assimilation of meteorological
91 observations with the adjoint vorticity equation.
92 II: Numerical results},
93 journal = qjrms,
94 volume = {113},
95 pages = {1329--1347},
96 }
97
98 @Article{cou-tal:90,
99 author = {P. Courtier and O. Talagrand},
100 year = 1990,
101 title = {Variational assimilation of meteorological
102 observations with direct and adjoint shallow-water
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104 journal = tel,
105 volume = {42A},
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107 }
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109 @Article{cou-eta:94,
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112 year = 1994,
113 title = {A strategy for operational implementation of
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115 journal = qjrms,
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117 pages = {1367--1387},
118 }
119
120 @Article{err:97,
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122 year = 1997,
123 title = {What is an adjoint model},
124 journal = bams,
125 volume = {78},
126 pages = {2577--2591},
127 }
128
129 @Article{far-moo:92,
130 author = {B.F. Farrell and A.M. Moore},
131 year = {1992},
132 title = {An adjoint method for obtaining the most rapidly
133 growing perturbation to oceanic flows},
134 journal = jpo,
135 volume = {22},
136 pages = {338--349},
137 }
138
139 @Article{far-ioa:96a,
140 author = {B.F. Farrell and P. Ioannou},
141 year = {1996a},
142 title = {Generalized stability theory. Part I:
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144 journal = jas,
145 volume = {53},
146 pages = {2025--2040},
147 }
148
149 @Article{far-ioa:96b,
150 author = {B.F. Farrell and P. Ioannou},
151 year = {1996b},
152 title = {Generalized stability theory. Part I:
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154 journal = jas,
155 volume = {53},
156 pages = {2041--2053},
157 }
158
159 @techreport{fau-pap:98,
160 author = {C. Faure and Y. Papegay},
161 year = 1998,
162 title = {Odyss{\'e}e User's Guide. Version 1.7},
163 institution = {Institut National de Recherche en Informatique
164 et en Automatique},
165 type = {Rapport Technique},
166 number = {0224},
167 address = {INRIA; 2004, route des Luciolis, B.P. 93;
168 06902 Sophia Antipolis Cedex; France},
169 note = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},
170 }
171
172 @Article{fau:00,
173 author = {C. Faure},
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176 journal = {Optimisation Methods and Software},
177 note = {in press},
178 }
179
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183 title = {Isopycnal mixing in ocean circulation models},
184 journal = jpo,
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192 year = 1995,
193 title = {Parameterizing eddy-induced tracer transports in
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196 volume = {25},
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199
200 @Article{gie-kam:98,
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202 year = 1998,
203 title = {Recipes for adjoint code construction},
204 journal = {ACM Transactions on Mathematical Software},
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207 }
208
209 @techreport{gie:99,
210 author = {R. Giering},
211 year = 1999,
212 title = {Tangent linear and Adjoint Model Compiler.
213 Users manual 1.4 (TAMC Version 5.2)},
214 institution = {Massachusetts Institute of Technology},
215 type = {Report},
216 number = {~},
217 address = {MIT/EAPS; 77 Massachusetts Ave.; Cambridge (MA)
218 02139; USA},
219 note = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},
220 }
221
222 @incollection{gie:00,
223 author = {R. Giering},
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225 N. Mahowald and R.G. Prinn and D.E. Hartley},
226 year = 2000,
227 booktitle = {Inverse methods in global biogeochemical cycles},
228 title = {Tangent linear and adjoint biogeochemical models},
229 publisher = {American Geophysical Union},
230 series = {Geophysical Monograph},
231 volume = {114},
232 address = {Washington, DC},
233 pages = {33--48},
234 }
235
236 @Article{gil-lem:89,
237 author = {J.C. Gilbert and C. Lemar\'echal},
238 year = 1989,
239 title = {Some numerical experiments with variable-storage
240 quasi-Newton algorithms},
241 journal = {Math. Programming},
242 volume = {45},
243 pages = {407--435},
244 }
245
246 @book{gil-eta:81,
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248 title = {Practical optimization},
249 year = 1981,
250 publisher = {Academic Press},
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252 pages = {401 pp.},
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256 author = {A. Griewank},
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258 title = {On automatic differentiation},
259 booktitle = {Mathematical Programming: Recent Developments and
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261 pages = {83--108},
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263 publisher = {Kluwer},
264 address = {Dordrecht, NL},
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266
267 @Article{gri:92,
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281 year = 2000,
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283 volume = {19},
284 publisher = {SIAM},
285 address = {Philadelphia},
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290 author = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},
291 year = 1982,
292 title = {Sensitivity analysis of a radiative-convective
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294 journal = jas,
295 volume = {39},
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298
299 @Article{Haney,
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303 journal = jpo,
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312 title = {A proposal for the intercomparison of the dynamical cores of atmospheric general circulation models},
313 journal = {Bulletin of the American Meteorological Society},
314 volume = {75(10)},
315 pages = {1825-1830}
316 }
317
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321 year = {2002},
322 title = {Spatial and Temporal Impacts of ocean general
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324 journal = {Global Biogeochemical Cycles},
325 note = {submitted},
326 }
327
328 @ARTICLE{hib80,
329 AUTHOR = "W. D. {Hibler, III}",
330 TITLE = "Modeling a Variable Thickness Sea Ice Cover",
331 JOURNAL = mwr,
332 YEAR = 1980,
333 VOLUME = 1,
334 PAGES = "1943-1973"
335 }
336
337 @Article{Holland75,
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339 year = {1975a},
340 title = {On the origin of mesoscale eddies and their contribution
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344 volume = {5},
345 pages = {642-657}
346 }
347
348 @Article{hol-lin:75b,
349 author = {W.R. Holland and L. B. Lin},
350 year = {1975b},
351 title = {On the origin of mesoscale eddies and their contribution
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354 journal = jpo,
355 volume = {5},
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357 }
358
359 @book{kas-eta:00,
360 author = {P. Kasibhatla and M. Heimann and P. Rayner and
361 N. Mahowald and R.G. Prinn and D.E. Hartley},
362 year = 2000,
363 title = {Inverse methods in global biogeochemical cycles},
364 publisher = {American Geophysical Union},
365 series = {Geophysical Monograph},
366 volume = {114},
367 address = {Washington, DC},
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373 year = 1994,
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380
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384 year = 1997,
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395 year = 1986,
396 title = {Variational algorithms for analysis and
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403
404 @TechReport{lev:94a,
405 author = {S. Levitus and T.P.Boyer},
406 title = {{World Ocean Atlas 1994 Volume 3: Salinity}},
407 institution = {NOAA Atlas NESDIS 3},
408 year = 1994,
409 OPTkey = {},
410 OPTtype = {},
411 OPTnumber = {},
412 OPTaddress = {U.S. Department of Commerce, Washington D.C.},
413 OPTmonth = {},
414 OPTnote = {},
415 OPTannote = {}
416 }
417
418
419 @TechReport{Levitus94,
420 author = {S. Levitus and T.P.Boyer},
421 title = {{World Ocean Atlas 1994 Volume 4: Temperature}},
422 institution = {NOAA Atlas NESDIS 4},
423 year = 1994,
424 OPTkey = {},
425 OPTtype = {},
426 OPTnumber = {},
427 OPTaddress = {U.S. Department of Commerce, Washington D.C.},
428 OPTmonth = {},
429 OPTnote = {},
430 OPTannote = {}
431 }
432
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444 @techreport{lon:88,
445 author = {R.B. Long},
446 year = 1988,
447 title = {Notes on assimilating observations into
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449 institution = {Delft Hydraulics},
450 type = {Report},
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454 }
455
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465 }
466
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475 volume = {104, C12},
476 pages = {29,529--29,547},
477 }
478
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480 author = {J. Marshall and C. Hill and L. Perelman and
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485 journal = jgr,
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487 pages = {5,733--5,752},
488 }
489
490 @Article{mars-eta:97b,
491 author = {J. Marshall and A. Adcroft and C. Hill and
492 L. Perelman and C. Heisey},
493 year = {1997b},
494 title = {Hydrostatic, quasi-hydrostatic and
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496 journal = jgr,
497 volume = {102, C3},
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499 }
500
501 @Article{mars-sha:98,
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503 year = 1998,
504 title = {Efficient ocean modeling using
505 non-hydrostatic algorithms},
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509 }
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512 author = {J. McWilliams},
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514 title = {Modeling the oceanic general circulation},
515 journal = arfm,
516 volume = {28},
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518 }
519
520 %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
521 %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.
522 %% (Available from Unidata or in PostScript form by anonymous FTP from
523 %% ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also
524 %% a hypertext version of the User's Guide available at
525 %% http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's
526 %% Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are
527 %% also available.
528
529 @TechReport{rew:97,
530 author = {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
531 title = {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},
532 An Interface for Data Access, Version 3},
533 institution = {Unidata Program Center},
534 type = {Report},
535 address = {Boulder, Colorado},
536 year = 1997,
537 note = {http://www.unidata.ucar.edu/packages/netcdf/},
538 }
539
540
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570 editor = {{D.L.T. Anderson and J. Willebrand}},
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