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revision 1.46 by jmc, Wed May 15 22:49:36 2013 UTC revision 1.54 by mlosch, Tue Mar 29 14:51:17 2016 UTC
# Line 4  Line 4 
4  @string{blm     = {Bound.~Layer~Meteorol.}}  @string{blm     = {Bound.~Layer~Meteorol.}}
5  @string{climd   = {Clim.~Dynamics}}  @string{climd   = {Clim.~Dynamics}}
6  @string{cch     = {Clim.\ Change}}  @string{cch     = {Clim.\ Change}}
7  @string{jgr     = {J.~Geophys.~Res.}}  @string{cup     = {Cambridge University Press}}
8  @string{ijrs    = {Int.~J.~Remote Sensing}}  @string{dao     = {Dyn.~Atmos.~Oceans}}
9  @string{jas     = {J.~Atmos.~Sci.}}  @string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}}
10    @string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}}
11    @string{dsr     = {Deep Sea Res.}}
12    @string{ecmwf   = {ECMWF}}
13    @string{eos     = {Eos~Trans.\ AGU}}
14    @string{esa     = {European Space Agency (ESA)}}
15    @string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}}
16    @string{estec   = {European Space Research and Technology Centre (ESTEC)}}
17    @string{gaos    = {Global Atmos.~Ocean System}}
18    @string{grl     = {Geophys.~Res.~Lett.}}
19    @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}
20    @string{ifremer = {IFREMER/CERSAT}}
21    @string{igarss  = {IEEE Press, Piscataway, N.J., USA}}
22  @string{jam     = {J.~Appl.~Meteor.}}  @string{jam     = {J.~Appl.~Meteor.}}
23  @string{jpo     = {J.~Phys.~Oceanogr.}}  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}
24    @string{jas     = {J.~Atmos.~Sci.}}
25  @string{jclim   = {J.~Clim.}}  @string{jclim   = {J.~Clim.}}
26  @string{jcp     = {J.~Comput.~Phys.}}  @string{jcp     = {J.~Comput.~Phys.}}
 @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}  
27  @string{jfm     = {J.~Fluid Mech.}}  @string{jfm     = {J.~Fluid Mech.}}
28  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}  @string{jgr     = {J.~Geophys.~Res.}}
29    @string{ijrs    = {Int.~J.~Remote Sensing}}
30  @string{jms     = {J.~Mar.~Sys.}}  @string{jms     = {J.~Mar.~Sys.}}
31  @string{om      = {Ocean Modelling}}  @string{jpo     = {J.~Phys.~Oceanogr.}}
32  @string{gaos    = {Global Atmos.~Ocean System}}  @string{mpi     = {MPI f\"ur Meteorologie}}
 @string{grl     = {Geophys.~Res.~Lett.}}  
 @string{dsr     = {Deep Sea Res.}}  
 @string{dao     = {Dyn.~Atmos.~Oceans}}  
33  @string{mwr     = {Mon.~Wea.~Rev.}}  @string{mwr     = {Mon.~Wea.~Rev.}}
34    @string{om      = {Ocean Modelling}}
35    @string{ptrsl   = {{Phil.~Trans.~R.~Soc.~Lond.}}}
36  @string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}}  @string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}}
37    @string{siscicom= {SIAM J.\ Sci.\ Comput.}}
38  @string{tel     = {Tellus}}  @string{tel     = {Tellus}}
 @string{cup     = {Cambridge University Press}}  
 @string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}}  
 @string{ifremer = {IFREMER/CERSAT}}  
 @string{igarss  = {IEEE Press, Piscataway, N.J., USA}}  
 @string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}}  
 @string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}}  
 @string{mpi     = {MPI f\"ur Meteorologie}}  
 @string{ecmwf   = {ECMWF}}  
 @string{estec   = {European Space Research and Technology Centre  
                         (ESTEC)}}  
 @string{esa     = {European Space Agency (ESA)}}  
 @string{eos     = {Eos~Trans.\ AGU}}  
39    
40  @Article{bis-eta:92,  @Article{bis-eta:92,
41   author         = {C.H. Bishof and G.F. Corliss and L. Green and   author         = {C.H. Bishof and G.F. Corliss and L. Green and
# Line 75  Line 76 
76   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
77                    }                    }
78    
79    @Article{bouillon13,
80      author =       {Sylvain Bouillon and Thierry Fichefet and Vincent
81                      Legat and Gurvan Madec},
82      title =        {The Elastic-Viscous-Plastic Method Revisited},
83      journal =      om,
84      volume =       71,
85      number =       0,
86      pages =        {2--12},
87      year =         2013,
88      note =         {Arctic Ocean},
89      issn =         {1463-5003},
90      doi =          {10.1016/j.ocemod.2013.05.013},
91      url =          {http://dx.doi.org/10.1016/j.ocemod.2013.05.013},
92    }
93  @ARTICLE{bryan:84,  @ARTICLE{bryan:84,
94    author = {Kirk Bryan},    author = {Kirk Bryan},
95    title = {Accelerating the convergence to equilibrium of Ocean-Climate Models},    title = {Accelerating the convergence to equilibrium of Ocean-Climate Models},
# Line 111  Line 126 
126   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
127                    }                    }
128    
129    @Article{castro-morales14,
130      author =       {Karel Castro-Morales and Frank Kauker and Martin
131                      Losch and Stefan Hendricks and Kathrin Riemann-Campe
132                      and R{\"u}diger Gerdes},
133      title =        {Sensitivity of Simulated {A}rctic Sea Ice to
134                      Realistic Ice Thickness Distributions and Snow
135                      Parameterizations},
136      journal =      jgr,
137      issn =         {2169-9291},
138      year =         2014,
139      volume =       119,
140      number =       1,
141      pages =        {559--571},
142      url =          {http://dx.doi.org/10.1002/2013JC009342},
143      doi =          {10.1002/2013JC009342},
144    }
145    
146  @Article{cou-tal:87,  @Article{cou-tal:87,
147   author         = {P. Courtier and O. Talagrand},   author         = {P. Courtier and O. Talagrand},
148   year           = 1987,   year           = 1987,
# Line 694  Line 726 
726                    }                    }
727    
728  @article{utke-etal:08,  @article{utke-etal:08,
729          Author = {J. Utke and U. Naumann and M. Fagan and N. Tallent and M. Strout and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch},    Author =       {J. Utke and U. Naumann and M. Fagan and N. Tallent
730          Date-Modified = {2007-11-19 10:15:08 -0500},                    and M. Strout and P. Heimbach and C. Hill and
731          Journal = {{ACM} Transactions on Mathematical Software},                    D. Ozyurt and C. Wunsch},
732          Pages = {~},    Date-Modified ={2007-11-19 10:15:08 -0500},
733          Title = {OpenAD/F: A modular open source tool for automatic differentiation of Fortran codes},    Journal =      {{ACM} Transactions on Mathematical Software},
734          Volume = {34(4)},    Pages =        {~},
735          Year = {2008}}    Title =        {OpenAD/F: A modular open source tool for automatic
736                      differentiation of Fortran codes},
737      Volume =       {34(4)},
738      Year =         2008
739    }
740    
741  @Article{DaSilva94,  @Article{DaSilva94,
742   author         = {A. da Silva and A. C. Young and S. Levitus},   author         = {A. da Silva and A. C. Young and S. Levitus},
# Line 730  Line 766 
766   address        = {Cambridge (MA), USA},   address        = {Cambridge (MA), USA},
767                    }                    }
768    
769  @ARTICLE{stam-etal:02,  @article{stam-etal:02,
770    author = {D. Stammer and C. Wunsch and R. Giering and C. Eckert and P. Heimbach and J. Marotzke and A. Adcroft and C.N. Hill and J. Marshall},    author =       {D. Stammer and C. Wunsch and R. Giering and
771    title = {The global ocean circulation and transports during 1992 -- 1997, estimated from ocean observations and a general circulation model.},                    C. Eckert and P. Heimbach and J. Marotzke and
772    journal = jgr,                    A. Adcroft and C.N. Hill and J. Marshall},
773    year = {2002a},    title =        {The global ocean circulation and transports during
774    volume = {107(C9)},                    1992 -- 1997, estimated from ocean observations and
775    pages = {3118},                    a general circulation model.},
776    doi   = {10.1029/2001JC000888},    journal =      jgr,
777      year =         {2002a},
778      volume =       {107(C9)},
779      pages =        {3118},
780      doi =          {10.1029/2001JC000888},
781  }  }
782    
783    
# Line 1852  atmospheric boundary layer.}, Line 1892  atmospheric boundary layer.},
1892    number =       {393--426}    number =       {393--426}
1893  }  }
1894    
1895  @ARTICLE{menemenlis05,  @Article{menemenlis05,
1896    author =       {D. Menemenlis and C. Hill and A. Adcroft and    author =       {D. Menemenlis and C. Hill and A. Adcroft and
1897                    J.-M. Campin and B. Cheng and B. Ciotti and                    J.-M. Campin and B. Cheng and B. Ciotti and
1898                    I. Fukumori and A. Koehl and P. Heimbach and                    I. Fukumori and A. Koehl and P. Heimbach and
# Line 1959  atmospheric boundary layer.}, Line 1999  atmospheric boundary layer.},
1999    pages =        {1787--1800}    pages =        {1787--1800}
2000  }  }
2001    
2002    @Article{hutchings04,
2003      author =       {Jennifer K. Hutchings and Hrvoje Jasak and Seymour
2004                      W. Laxon},
2005      title =        {A Strength Implicit Correction Scheme for the
2006                      Viscous-Plastic Sea Ice Model},
2007      journal =      om,
2008      year =         2004,
2009      volume =       7,
2010      number =       {1--2},
2011      pages =        {111-133},
2012      doi =          {10.1016/S1463-5003(03)00040-4}
2013    }
2014    
2015  @Article{jenkins01,  @Article{jenkins01,
2016    author =       {Adrian Jenkins and Hartmut H. Hellmer and David    author =       {Adrian Jenkins and Hartmut H. Hellmer and David
2017                    M. Holland},                    M. Holland},
# Line 1970  atmospheric boundary layer.}, Line 2023  atmospheric boundary layer.},
2023    volume =       31,    volume =       31,
2024    pages =        {285--296}}    pages =        {285--296}}
2025    
2026    @Article{kalnay96,
2027      author =       {E. Kalnay and M. Kanamitsu and R. Kistler and
2028                      W. Collins and D. Deaven and L. Gandin and
2029                      M. Iredell and S. Saha and G. White and J. Woollen
2030                      and Y. Zhu and M. Chelliah and W. Ebisuzaki and
2031                      W. Higgins and J. Janowiak and K. C. Mo and
2032                      C. Ropelewski and J. Wang and A. Leetmaa and
2033                      R. Reynolds and R. Jenne and D. Joseph},
2034      title =        {The {NMC/NCAR} 40-Year Reanalysis Project},
2035      journal =      bams,
2036      year =         1996,
2037      volume =       77,
2038      pages =        {437--471}
2039    }
2040    
2041    @Article{kimmritz15,
2042      author =       {Madlen Kimmritz and Sergey Danilov and Martin Losch},
2043      title =        {On the Convergence of the Modified
2044                      Elastic-Viscous-Plastic Method of Solving for
2045                      Sea-Ice Dynamics},
2046      journal =      jcp,
2047      year =         2015,
2048      volume =       296,
2049      pages =        {90--100},
2050      doi =          {10.1016/j.jcp.2015.04.051}}
2051    
2052    @Article{kimmritz16,
2053      author =       {Madlen Kimmritz and Sergey Danilov and Martin Losch},
2054      title =        {The Adaptive {EVP} Method for Solving the Sea Ice Momentum Equation},
2055      journal =      om,
2056      year =         2016,
2057      url =          {http://mitgcm.org/~mlosch/adaptiveEVP_accepted.pdf},
2058      OPTvolume =    {},
2059      OPTnumber =    {},
2060      OPTpages =     {},
2061      OPTmonth =     {},
2062      OPTnote =      {},
2063      OPTannote =    {},
2064      OPTdoi =       {}}
2065    
2066    @Article{klymaklegg10,
2067      author =       {Klymak, Jody M. and Sonya M. Legg},
2068      title =        {A simple mixing scheme for models that resolve
2069                      breaking internal waves},
2070      journal =      om,
2071      year =         2010,
2072      volume =       33,
2073      pages =        {224--234},
2074      doi =          {10.1016/j.ocemod.2010.02.005}
2075    }
2076    
2077  @Article{losch08,  @Article{losch08,
2078    author =       {Martin Losch},    author =       {Martin Losch},
2079    title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean    title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean
# Line 1981  atmospheric boundary layer.}, Line 2085  atmospheric boundary layer.},
2085    doi =          {10.1029/2007JC004368}    doi =          {10.1029/2007JC004368}
2086  }  }
2087    
2088    @Article{losch10:_mitsim,
2089      author =       {Losch, Martin and Menemenlis, Dimitris and Campin,
2090                      Jean-Michel and Heimbach, Patrick and Hill, Chris},
2091      title =        {On the formulation of sea-ice models. {P}art 1:
2092                      Effects of different solver implementations and
2093                      parameterizations},
2094      journal =      om,
2095      year =         2010,
2096      volume =       33,
2097      number =       {1--2},
2098      pages =        {129--144},
2099      doi =          {10.1016/j.ocemod.2009.12.008}
2100    }
2101    
2102    @Article{losch14:_jfnk,
2103      author =       {Martin Losch and Annika Fuchs and
2104                      Jean-Fran{\c{c}}ois Lemieux and Anna Vanselow},
2105      title =        {A Parallel {J}Acobian-Free {N}ewton-{K}rylov Solver
2106                      for a Coupled Sea Ice-Ocean Model },
2107      journal =      jcp,
2108      volume =       {257},
2109      number =       {A},
2110      pages =        {901--910},
2111      year =         {2014},
2112      doi =          {10.1016/j.jcp.2013.09.026}
2113    }
2114    
2115    @Article{lemieux09,
2116      author =       {Jean-Fran{\c{c}}ois Lemieux and Bruno Tremblay},
2117      title =        {Numerical Convergence of Viscous-Plastic Sea Ice
2118                      Models},
2119      journal =      jgr,
2120      year =         2009,
2121      volume =       114,
2122      number =       {C05009},
2123      doi =          {10.1029/2008JC005017}}
2124    
2125    @Article{lemieux10,
2126      author =       {Jean-Fran{\c{c}}ois Lemieux and Bruno Tremblay and Jan
2127                      Sedl{\'a}{\v{c}}ek and Paul Tupper and Stephen
2128                      Thomas and David Huard and Jean-Pierre Auclair},
2129      title =        {Improving the Numerical Convergence of
2130                      Viscous-Plastic Sea Ice Models with the
2131                      {J}acobian-Free {N}ewton-{K}rylov Method},
2132      journal =      jcp,
2133      year =         2010,
2134      volume =       229,
2135      pages =        {2840--2852},
2136      doi =          {10.1016/j.jcp.2009.12.011c}}
2137    
2138    @Article{lemieux12,
2139      author =       {Jean-Fran{\c{c}}ois Lemieux and Dana Knoll and Bruno
2140                      Tremblay and David M. Holland and Martin Losch},
2141      title =        {A Comparison of the {J}acobian-free
2142                      {N}ewton-{K}rylov Method and the {EVP} Model for
2143                      Solving the Sea Ice Momentum Equation with a
2144                      Viscous-Plastic Formulation: a Serial Algorithm
2145                      Study},
2146      journal =      jcp,
2147      year =         2012,
2148      volume =       231,
2149      number =       17,
2150      pages =        {5926--5944},
2151      doi =          {10.1016/j.jcp.2012.05.024}}
2152    
2153    @article{knoll04:_jfnk,
2154      Author =       {D.A. Knoll and D.E. Keyes},
2155      Title =        {{J}acobian-free {N}ewton-{K}rylov Methods: a Survey
2156                      of Approaches and Applications},
2157      Journal =      jcp,
2158      Year =         2004,
2159      Volume =       193,
2160      Pages =        {357--397},
2161      doi =          {10.1016/j.jcp.2003.08.010},
2162    }
2163    
2164    @Article{saad93:_fgmres,
2165      author =       {Y. Saad},
2166      title =        {A Flexible Inner-Outer Preconditioned {GMRES}
2167                      Method},
2168      journal =      siscicom,
2169      year =         1993,
2170      volume =       14,
2171      number =       2,
2172      pages =        {461--469}}
2173    
2174  @Article{Dutay02,  @Article{Dutay02,
2175   author         = {Dutay, J.-C. and J.L. Bullister and S.C. Doney and J.C. Orr   author         = {Dutay, J.-C. and J.L. Bullister and S.C. Doney and J.C. Orr
2176      and R. Najjar and K. Caldeira and J.-M. Campin and H. Drange and M. Follows      and R. Najjar and K. Caldeira and J.-M. Campin and H. Drange and M. Follows
# Line 2022  atmospheric boundary layer.}, Line 2212  atmospheric boundary layer.},
2212    journal =      {Geophys. Astrophys. Fl. Dyn.},    journal =      {Geophys. Astrophys. Fl. Dyn.},
2213    year =         1990,    year =         1990,
2214    volume =       51,    volume =       51,
2215    pages =        {103--133}}    pages =        {103--133}
2216    }
2217    
2218  @Article{kalnay96,  
2219    author =       {E. Kalnay and M. Kanamitsu and R. Kistler and  @Article{moum96,
2220                    W. Collins and D. Deaven and L. Gandin and    author        = {Moum, J.N.},
2221                    M. Iredell and S. Saha and G. White and J. Woollen    title         = {Energy-containing scales of turbulence in the ocean thermocline},
2222                    and Y. Zhu and M. Chelliah and W. Ebisuzaki and    journal       = jgr,
2223                    W. Higgins and J. Janowiak and K. C. Mo and    year          = 1996,
2224                    C. Ropelewski and J. Wang and A. Leetmaa and    volume        = {101 (C3)},
2225                    R. Reynolds and R. Jenne and D. Joseph},    pages         = {14095--14109}
2226    title =        {The {NMC/NCAR} 40-Year Reanalysis Project},  }
2227    journal =      bams,  
2228    year =         1996,  @Article{seimgregg94,
2229    volume =       77,    author        = {Seim, Harvey E. and Michael C. Gregg},
2230    pages =        {437--471}    title         = {Detailed observations of a naturally occurring shear instability},
2231      journal       = jgr,
2232      year          = 1994,
2233      volume        = {99 (C5)},
2234      pages         = {10049--10073},
2235    }
2236    
2237    @Article{thorpe77,
2238      author        = {Thorpe, S.A.},
2239      title         = {Turbulence and mixing in a Scottish loch},
2240      journal       = ptrsl,
2241      year          = 1977,
2242      volume        = {286},
2243      pages         = {125--181}
2244    }
2245    
2246    @Article{wesson94,
2247      author        = {Wesson, J. C. and  Michael C. Gregg},
2248      title         = {Mixing at Camarinal Sill in the Strait of Gibraltar},
2249      journal       = jgr,
2250      year          = 1994,
2251      volume        = {99 (C5)},
2252      pages         = { 9847--9878}
2253  }  }
2254    
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