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revision 1.42 by mlosch, Wed Mar 2 13:18:42 2011 UTC revision 1.53 by mlosch, Mon Jul 27 09:51:45 2015 UTC
# Line 4  Line 4 
4  @string{blm     = {Bound.~Layer~Meteorol.}}  @string{blm     = {Bound.~Layer~Meteorol.}}
5  @string{climd   = {Clim.~Dynamics}}  @string{climd   = {Clim.~Dynamics}}
6  @string{cch     = {Clim.\ Change}}  @string{cch     = {Clim.\ Change}}
7  @string{jgr     = {J.~Geophys.~Res.}}  @string{cup     = {Cambridge University Press}}
8  @string{ijrs    = {Int.~J.~Remote Sensing}}  @string{dao     = {Dyn.~Atmos.~Oceans}}
9  @string{jas     = {J.~Atmos.~Sci.}}  @string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}}
10    @string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}}
11    @string{dsr     = {Deep Sea Res.}}
12    @string{ecmwf   = {ECMWF}}
13    @string{eos     = {Eos~Trans.\ AGU}}
14    @string{esa     = {European Space Agency (ESA)}}
15    @string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}}
16    @string{estec   = {European Space Research and Technology Centre (ESTEC)}}
17    @string{gaos    = {Global Atmos.~Ocean System}}
18    @string{grl     = {Geophys.~Res.~Lett.}}
19    @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}
20    @string{ifremer = {IFREMER/CERSAT}}
21    @string{igarss  = {IEEE Press, Piscataway, N.J., USA}}
22  @string{jam     = {J.~Appl.~Meteor.}}  @string{jam     = {J.~Appl.~Meteor.}}
23  @string{jpo     = {J.~Phys.~Oceanogr.}}  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}
24    @string{jas     = {J.~Atmos.~Sci.}}
25  @string{jclim   = {J.~Clim.}}  @string{jclim   = {J.~Clim.}}
26  @string{jcp     = {J.~Comput.~Phys.}}  @string{jcp     = {J.~Comput.~Phys.}}
 @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}  
27  @string{jfm     = {J.~Fluid Mech.}}  @string{jfm     = {J.~Fluid Mech.}}
28  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}  @string{jgr     = {J.~Geophys.~Res.}}
29    @string{ijrs    = {Int.~J.~Remote Sensing}}
30  @string{jms     = {J.~Mar.~Sys.}}  @string{jms     = {J.~Mar.~Sys.}}
31  @string{om      = {Ocean Modelling}}  @string{jpo     = {J.~Phys.~Oceanogr.}}
32  @string{gaos    = {Global Atmos.~Ocean System}}  @string{mpi     = {MPI f\"ur Meteorologie}}
 @string{grl     = {Geophys.~Res.~Lett.}}  
 @string{dsr     = {Deep Sea Res.}}  
 @string{dao     = {Dyn.~Atmos.~Oceans}}  
33  @string{mwr     = {Mon.~Wea.~Rev.}}  @string{mwr     = {Mon.~Wea.~Rev.}}
34    @string{om      = {Ocean Modelling}}
35    @string{ptrsl   = {{Phil.~Trans.~R.~Soc.~Lond.}}}
36  @string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}}  @string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}}
37    @string{siscicom= {SIAM J.\ Sci.\ Comput.}}
38  @string{tel     = {Tellus}}  @string{tel     = {Tellus}}
 @string{cup     = {Cambridge University Press}}  
 @string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}}  
 @string{ifremer = {IFREMER/CERSAT}}  
 @string{igarss  = {IEEE Press, Piscataway, N.J., USA}}  
 @string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}}  
 @string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}}  
 @string{mpi     = {MPI f\"ur Meteorologie}}  
 @string{ecmwf   = {ECMWF}}  
 @string{estec   = {European Space Research and Technology Centre  
                         (ESTEC)}}  
 @string{esa     = {European Space Agency (ESA)}}  
 @string{eos     = {Eos~Trans.\ AGU}}  
39    
40  @Article{bis-eta:92,  @Article{bis-eta:92,
41   author         = {C.H. Bishof and G.F. Corliss and L. Green and   author         = {C.H. Bishof and G.F. Corliss and L. Green and
# Line 46  Line 47 
47   volume         = {3},   volume         = {3},
48   pages          = {625--638},   pages          = {625--638},
49                    }                    }
50    
51  @incollection{bis:94,  @incollection{bis:94,
52   author         = {C.H. Bishof},   author         = {C.H. Bishof},
53   year           = 1994,   year           = 1994,
# Line 59  Line 60 
60   publisher      = {Kluwer},   publisher      = {Kluwer},
61   address        = {Dordrecht, NL},   address        = {Dordrecht, NL},
62                    }                    }
63    
64  @techreport{bis-eta:94,  @techreport{bis-eta:94,
65   author         = {C. Bishof and A. Carle and P. Khademi and   author         = {C. Bishof and A. Carle and P. Khademi and
66                    A. Maurer},                    A. Maurer},
# Line 70  Line 71 
71                    Computer Science Division},                    Computer Science Division},
72   type           = {Argonne Preprint},   type           = {Argonne Preprint},
73   number         = {ANL-MCS-P981-1194},   number         = {ANL-MCS-P981-1194},
74   address        = {ANL; 9700 South Cass Ave.;   address        = {ANL; 9700 South Cass Ave.;
75                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
76   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
77                    }                    }
78    
79    @Article{bouillon13,
80      author =       {Sylvain Bouillon and Thierry Fichefet and Vincent
81                      Legat and Gurvan Madec},
82      title =        {The Elastic-Viscous-Plastic Method Revisited},
83      journal =      om,
84      volume =       71,
85      number =       0,
86      pages =        {2--12},
87      year =         2013,
88      note =         {Arctic Ocean},
89      issn =         {1463-5003},
90      doi =          {10.1016/j.ocemod.2013.05.013},
91      url =          {http://dx.doi.org/10.1016/j.ocemod.2013.05.013},
92    }
93    @ARTICLE{bryan:84,
94      author = {Kirk Bryan},
95      title = {Accelerating the convergence to equilibrium of Ocean-Climate Models},
96      journal = jpo,
97      year = {1984},
98      volume = {14},
99      number = {4},
100      pages = {666-673},
101    }
102    
103  @ARTICLE{bugi-hill:06,  @ARTICLE{bugi-hill:06,
104    author = {V. Bugnion and C. Hill},    author = {V. Bugnion and C. Hill},
105    title = {Equilibration mechanisms in an adjoint ocean general    title = {Equilibration mechanisms in an adjoint ocean general
# Line 86  Line 111 
111    pages = {51-61},    pages = {51-61},
112    doi   = {10.1007/s10236-005-0052-z},    doi   = {10.1007/s10236-005-0052-z},
113  }  }
114    
115  @techreport{bis-roh:97,  @techreport{bis-roh:97,
116   author         = {C. Bishof and L. Roh},   author         = {C. Bishof and L. Roh},
117   year           = 1997,   year           = 1997,
# Line 96  Line 121 
121                    Computer Science Division},                    Computer Science Division},
122   type           = {Argonne Preprint},   type           = {Argonne Preprint},
123   number         = {ANL-MCS-P626-1196},   number         = {ANL-MCS-P626-1196},
124   address        = {ANL; 9700 South Cass Ave.;   address        = {ANL; 9700 South Cass Ave.;
125                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
126   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
127                    }                    }
128    
129    @Article{castro-morales14,
130      author =       {Karel Castro-Morales and Frank Kauker and Martin
131                      Losch and Stefan Hendricks and Kathrin Riemann-Campe
132                      and R{\"u}diger Gerdes},
133      title =        {Sensitivity of Simulated {A}rctic Sea Ice to
134                      Realistic Ice Thickness Distributions and Snow
135                      Parameterizations},
136      journal =      jgr,
137      issn =         {2169-9291},
138      year =         2014,
139      volume =       119,
140      number =       1,
141      pages =        {559--571},
142      url =          {http://dx.doi.org/10.1002/2013JC009342},
143      doi =          {10.1002/2013JC009342},
144    }
145    
146  @Article{cou-tal:87,  @Article{cou-tal:87,
147   author         = {P. Courtier and O. Talagrand},   author         = {P. Courtier and O. Talagrand},
148   year           = 1987,   year           = 1987,
149   title          = {Variational assimilation of meteorological   title          = {Variational assimilation of meteorological
150                    observations with the adjoint vorticity equation.                    observations with the adjoint vorticity equation.
151                    II: Numerical results},                    II: Numerical results},
152   journal        = qjrms,   journal        = qjrms,
153   volume         = {113},   volume         = {113},
154   pages          = {1329--1347},   pages          = {1329--1347},
155                    }                    }
156    
157  @Article{cou-tal:90,  @Article{cou-tal:90,
158   author         = {P. Courtier and O. Talagrand},   author         = {P. Courtier and O. Talagrand},
159   year           = 1990,   year           = 1990,
# Line 122  Line 164 
164   volume         = {42A},   volume         = {42A},
165   pages          = {531--549},   pages          = {531--549},
166                    }                    }
167    
168  @Article{cou-eta:94,  @Article{cou-eta:94,
169   author         = {P. Courtier and J.-N. Th{\'e}paut and   author         = {P. Courtier and J.-N. Th{\'e}paut and
170                    A. Hollingsworth},                    A. Hollingsworth},
# Line 143  Line 185 
185    volume = {119},    volume = {119},
186    pages  = {702-720},    pages  = {702-720},
187  }  }
188    
189    
190  @ARTICLE{dutk-etal:06,  @ARTICLE{dutk-etal:06,
191    author = {S. Dutkiewicz and M.J. Follows and P. Heimbach and J. Marshall},    author = {S. Dutkiewicz and M.J. Follows and P. Heimbach and J. Marshall},
# Line 155  Line 197 
197    pages  = {L02603},    pages  = {L02603},
198    doi    = {10.1029/2005GL024987},    doi    = {10.1029/2005GL024987},
199  }  }
200    
201  @Article{err:97,  @Article{err:97,
202   author         = {R.M. Errico},   author         = {R.M. Errico},
203   year           = 1997,   year           = 1997,
# Line 164  Line 206 
206   volume         = {78},   volume         = {78},
207   pages          = {2577--2591},   pages          = {2577--2591},
208                    }                    }
209    
210  @Article{far-moo:92,  @Article{far-moo:92,
211   author         = {B.F. Farrell and A.M. Moore},   author         = {B.F. Farrell and A.M. Moore},
212   year           = {1992},   year           = {1992},
# Line 174  Line 216 
216   volume         = {22},   volume         = {22},
217   pages          = {338--349},   pages          = {338--349},
218                    }                    }
219    
220  @Article{far-ioa:96a,  @Article{far-ioa:96a,
221   author         = {B.F. Farrell and P. Ioannou},   author         = {B.F. Farrell and P. Ioannou},
222   year           = {1996a},   year           = {1996a},
# Line 184  Line 226 
226   volume         = {53},   volume         = {53},
227   pages          = {2025--2040},   pages          = {2025--2040},
228                    }                    }
229    
230  @Article{far-ioa:96b,  @Article{far-ioa:96b,
231   author         = {B.F. Farrell and P. Ioannou},   author         = {B.F. Farrell and P. Ioannou},
232   year           = {1996b},   year           = {1996b},
# Line 194  Line 236 
236   volume         = {53},   volume         = {53},
237   pages          = {2041--2053},   pages          = {2041--2053},
238                    }                    }
239    
240  @techreport{fau-pap:98,  @techreport{fau-pap:98,
241   author         = {C. Faure and Y. Papegay},   author         = {C. Faure and Y. Papegay},
242   year           = 1998,   year           = 1998,
# Line 207  Line 249 
249                    06902 Sophia Antipolis Cedex; France},                    06902 Sophia Antipolis Cedex; France},
250   note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},   note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},
251                    }                    }
252    
253  @Article{fau:00,  @Article{fau:00,
254   author         = {C. Faure},   author         = {C. Faure},
255   year           = {2000},   year           = {2000},
# Line 215  Line 257 
257   journal        = {Optimisation Methods and Software},   journal        = {Optimisation Methods and Software},
258   note           = {in press},   note           = {in press},
259                    }                    }
260    
261  @Article{fer-eta:05,  @Article{fer-eta:05,
262   author         = {D. Ferreira and J. Marshall and P. Heimbach},   author         = {D. Ferreira and J. Marshall and P. Heimbach},
263   year           = 2005,   year           = 2005,
# Line 227  Line 269 
269                    }                    }
270    
271  @Article{gas-eta:90,  @Article{gas-eta:90,
272   author         = {P. Gaspar and Y. Gr\'egoris and J.-M. Lefevre},   author         = {P. Gaspar and Y. Gr\'egoris and J.-M. Lefevre},
273   year           = 1990,   year           = 1990,
274   title          = {A Simple Eddy Kinetic Energy Model for Simulations of the   title          = {A Simple Eddy Kinetic Energy Model for Simulations of the
275                     Oceanic Vertical Mixing: Tests at Station Papa and Long-Term                     Oceanic Vertical Mixing: Tests at Station Papa and Long-Term
276                     Upper Ocean Study Site},                     Upper Ocean Study Site},
277   journal        = jgr,   journal        = jgr,
278   volume         = {95 (C9)},   volume         = {95 (C9)},
# Line 238  Line 280 
280                    }                    }
281    
282  @Article{gen-mcw:90,  @Article{gen-mcw:90,
283   author         = {P.R. Gent and J.C. McWilliams},   author         = {P. R. Gent and J. C. McWilliams},
284   year           = 1990,   year           = 1990,
285   title          = {Isopycnal mixing in ocean circulation models},   title          = {Isopycnal mixing in ocean circulation models},
286   journal        = jpo,   journal        = jpo,
287   volume         = {20},   volume         = {20},
288   pages          = {150--155},   pages          = {150--155},
289                    }                    }
290    
291  @Article{gen-eta:95,  @Article{gen-eta:95,
292   author         = {P.R. Gent and J. Willebrand and T.J. McDougall   author         = {P. R. Gent and J. Willebrand and T. J. McDougall and J. C. McWilliams},
                   and J.C. McWilliams},  
293   year           = 1995,   year           = 1995,
294   title          = {Parameterizing eddy-induced tracer transports in   title          = {Parameterizing eddy-induced tracer transports in ocean circulation models},
                   ocean circulation models},  
295   journal        = jpo,   journal        = jpo,
296   volume         = {25},   volume         = {25},
297   pages          = {463--474},   pages          = {463--474},
298                    }                    }
299    
300  @Article{gie-kam:98,  @Article{gie-kam:98,
301   author         = {R. Giering and T. Kaminski},   author         = {R. Giering and T. Kaminski},
302   year           = 1998,   year           = 1998,
# Line 269  Line 309 
309  @techreport{gie:99,  @techreport{gie:99,
310   author         = {R. Giering},   author         = {R. Giering},
311   year           = 1999,   year           = 1999,
312   title          = {Tangent linear and Adjoint Model Compiler.   title          = {Tangent linear and Adjoint Model Compiler.
313                    Users manual 1.4 (TAMC Version 5.2)},                    Users manual 1.4 (TAMC Version 5.2)},
314   institution    = {Massachusetts Institute of Technology},   institution    = {Massachusetts Institute of Technology},
315   type           = {Report},   type           = {Report},
# Line 278  Line 318 
318                    02139; USA},                    02139; USA},
319   note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},   note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},
320                    }                    }
321    
322  @incollection{gie:00,  @incollection{gie:00,
323   author         = {R. Giering},   author         = {R. Giering},
324   editor         = {P. Kasibhatla and M. Heimann and P. Rayner and   editor         = {P. Kasibhatla and M. Heimann and P. Rayner and
# Line 302  Line 342 
342   volume         = {45},   volume         = {45},
343   pages          = {407--435},   pages          = {407--435},
344                    }                    }
345    
346  @book{gil-eta:81,  @book{gil-eta:81,
347   author         = {P.E. Gill and W. Murray and M.H. Wright},   author         = {P.E. Gill and W. Murray and M.H. Wright},
348   title          = {Practical optimization},   title          = {Practical optimization},
349   year           = 1981,   year           = 1981,
350   publisher      = {Academic Press},   publisher      = {Academic Press},
351   address        = {London},   address        = {London},
352   pages          = {401 pp.},   pages          = {401 pp.},
353                    }                    }
354                                                                      
355  @incollection{gri:89,  @incollection{gri:89,
356   author         = {A. Griewank},   author         = {A. Griewank},
357   year           = 1989,   year           = 1989,
# Line 323  Line 363 
363   publisher      = {Kluwer},   publisher      = {Kluwer},
364   address        = {Dordrecht, NL},   address        = {Dordrecht, NL},
365                    }                    }
366    
367  @Article{gri:92,  @Article{gri:92,
368    author =       {A.~Griewank},    author =       {A.~Griewank},
369    title =        {Achieving logarithmic growth of temporal and spatial    title =        {Achieving logarithmic growth of temporal and spatial
# Line 342  Line 382 
382   series         = {Frontiers in Applied Mathematics},   series         = {Frontiers in Applied Mathematics},
383   volume         = {19},   volume         = {19},
384   publisher      = {SIAM},   publisher      = {SIAM},
385   address        = {Philadelphia},   address        = {Philadelphia},
386   pages          = {369 pp.},   pages          = {369 pp.},
387                    }                    }
388                                                                      
389  @Article{hal-eta:82,  @Article{hal-eta:82,
390   author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},   author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},
391   year           = 1982,   year           = 1982,
# Line 365  Line 405 
405    volume =       1,    volume =       1,
406    pages =        {241--248}    pages =        {241--248}
407  }  }
408    
409  @Article{held-suar:94,  @Article{held-suar:94,
410   author         = {I.M. Held and M.J. Suarez},   author         = {I.M. Held and M.J. Suarez},
411   year           = {1994},   year           = {1994},
# Line 374  Line 414 
414   volume         = {75(10)},   volume         = {75(10)},
415   pages          = {1825-1830}   pages          = {1825-1830}
416  }  }
417    
418  @Article{hil-eta:01,  @Article{hil-eta:01,
419   author         = {C. Hill and M. Follows and V. Bugnion and   author         = {C. Hill and M. Follows and V. Bugnion and
420                    J. Marshall},                    J. Marshall},
421   year           = {2002},   year           = {2002},
422   title          = {Spatial and Temporal Impacts of ocean general   title          = {Spatial and Temporal Impacts of ocean general
423                    circulation on carbon sequestration},                    circulation on carbon sequestration},
424   journal        = {Global Biogeochemical Cycles},   journal        = {Global Biogeochemical Cycles},
425   note           = {submitted},   note           = {submitted},
# Line 397  Line 437 
437  @Article{Holland75,  @Article{Holland75,
438   author         = {W.R. Holland and L. B. Lin},   author         = {W.R. Holland and L. B. Lin},
439   year           = {1975a},   year           = {1975a},
440   title          = {On the origin of mesoscale eddies and their contribution   title          = {On the origin of mesoscale eddies and their contribution
441                     to the general circulation of the ocean. I. A preliminary                     to the general circulation of the ocean. I. A preliminary
442                     numerical experiment},                     numerical experiment},
443   journal        = jpo,   journal        = jpo,
444   volume         = {5},   volume         = {5},
# Line 408  Line 448 
448  @Article{hol-lin:75b,  @Article{hol-lin:75b,
449   author         = {W.R. Holland and L. B. Lin},   author         = {W.R. Holland and L. B. Lin},
450   year           = {1975b},   year           = {1975b},
451   title          = {On the origin of mesoscale eddies and their contribution   title          = {On the origin of mesoscale eddies and their contribution
452                     to the general circulation of the ocean. II. A parameter                     to the general circulation of the ocean. II. A parameter
453                     study},                     study},
454   journal        = jpo,   journal        = jpo,
# Line 417  Line 457 
457                    }                    }
458    
459  @Article{jam-oze:86,  @Article{jam-oze:86,
460   author         = {B.M. Jamart and J. Ozer},   author         = {B.M. Jamart and J. Ozer},
461   year           = {1986},   year           = {1986},
462   title          = {Numerical boundary layers and spurious residual flows},   title          = {Numerical boundary layers and spurious residual flows},
463   journal        = jgr,   journal        = jgr,
464   volume         = {91},   volume         = {91},
465   pages          = {10,621-10,631}   pages          = {10,621-10,631}
# Line 440  Line 480 
480  @Article{lar-eta:94,  @Article{lar-eta:94,
481   author         = {W.G. Large and J.C. McWilliams and S.C. Doney},   author         = {W.G. Large and J.C. McWilliams and S.C. Doney},
482   year           = 1994,   year           = 1994,
483   title          = {Oceanic vertical mixing: A review and a model   title          = {Oceanic vertical mixing: A review and a model with nonlocal boundary layer parameterization},
                   with nonlocal boundary layer parameterization},  
484   journal        = {Rev.~Geophys.},   journal        = {Rev.~Geophys.},
485   volume         = {32},   volume         = {32},
486   pages          = {363--403},   pages          = {363--403},
487                    }                    }
488    
489  @Article{lar-eta:97,  @Article{lar-eta:97,
490   author         = {W.G. Large and G. Danabasoglu and S.C. Doney   author         = {W. G. Large and G. Danabasoglu and S. C. Doney
491                    and J.C. McWilliams},                    and J. C. McWilliams},
492   year           = 1997,   year           = 1997,
493   title          = {Sensitivity to surface forcing and boundary layer   title          = {Sensitivity to surface forcing and boundary layer
494                    mixing in a global ocean model: annual-mean                    mixing in a global ocean model: Annual-mean climatology},
                   climatology},  
495   journal        = jpo,   journal        = jpo,
496   volume         = {27},   volume         = {27},
497     number         = 11,
498   pages          = {2418--2447},   pages          = {2418--2447},
499                    }                    }
500    
501  @Article{led-tal:86,  @Article{led-tal:86,
502   author         = {F.-X. {Le Dimet} and O. Talagrand},   author         = {F.-X. {Le Dimet} and O. Talagrand},
503   year           = 1986,   year           = 1986,
# Line 499  Line 538 
538    OPTannote =    {}    OPTannote =    {}
539  }  }
540    
541    
542  @Article{lew-der:85,  @Article{lew-der:85,
543   author         = {J. Lewis and J. Derber},   author         = {J. Lewis and J. Derber},
544   year           = {1985},   year           = {1985},
# Line 509  Line 548 
548   volume         = {37A},   volume         = {37A},
549   pages          = {309--322},   pages          = {309--322},
550                    }                    }
551    
552  @techreport{lon:88,  @techreport{lon:88,
553   author         = {R.B. Long},   author         = {R.B. Long},
554   year           = 1988,   year           = 1988,
# Line 535  Line 574 
574    url    = {http://mitgcm.org/pdfs/Los2006a.pdf},    url    = {http://mitgcm.org/pdfs/Los2006a.pdf},
575  }  }
576    
577    
578  @Article{maro-wun:93,  @Article{maro-wun:93,
579   author         = {J. Marotzke and C. Wunsch},   author         = {J. Marotzke and C. Wunsch},
580   year           = 1993,   year           = 1993,
# Line 546  Line 585 
585   volume         = {98, C11},   volume         = {98, C11},
586   pages          = {20,149--20,167},   pages          = {20,149--20,167},
587                    }                    }
588    
589  @Article{maro-eta:99,  @Article{maro-eta:99,
590   author         = {J. Marotzke and R. Giering and K.Q. Zhang and   author         = {J. Marotzke and R. Giering and K.Q. Zhang and
591                    D. Stammer and C. Hill and T. Lee},                    D. Stammer and C. Hill and T. Lee},
592   year           = 1999,   year           = 1999,
593   title          = {Construction of the adjoint MIT ocean general   title          = {Construction of the adjoint MIT ocean general
# Line 558  Line 597 
597   volume         = {104, C12},   volume         = {104, C12},
598   pages          = {29,529--29,547},   pages          = {29,529--29,547},
599                    }                    }
600    
601  @Article{mars-eta:97a,  @Article{mars-eta:97a,
602   author         = {J. Marshall and C. Hill and L. Perelman and   author         = {J. Marshall and C. Hill and L. Perelman and
603                    A. Adcroft},                    A. Adcroft},
# Line 569  Line 608 
608   volume         = {102, C3},   volume         = {102, C3},
609   pages          = {5,733--5,752},   pages          = {5,733--5,752},
610                    }                    }
611    
612  @Article{mars-eta:97b,  @Article{mars-eta:97b,
613   author         = {J. Marshall and A. Adcroft and C. Hill and   author         = {J. Marshall and A. Adcroft and C. Hill and
614                    L. Perelman and C. Heisey},                    L. Perelman and C. Heisey},
615   year           = {1997b},   year           = {1997b},
616   title          = {Hydrostatic, quasi-hydrostatic and   title          = {Hydrostatic, quasi-hydrostatic and
# Line 580  Line 619 
619   volume         = {102, C3},   volume         = {102, C3},
620   pages          = {5,753--5,766},   pages          = {5,753--5,766},
621                    }                    }
622    
623  @Article{mars-eta:98,  @Article{mars-eta:98,
624   author         = {J. Marshall and H. Jones and C. Hill},   author         = {J. Marshall and H. Jones and C. Hill},
625   year           = 1998,   year           = 1998,
# Line 592  Line 631 
631   url            = {http://mitgcm.org/pdfs/journal_of_marine_systems_1998.pdf},   url            = {http://mitgcm.org/pdfs/journal_of_marine_systems_1998.pdf},
632   doi            = {10.1016/S0924-7963\%2898\%2900008-6},   doi            = {10.1016/S0924-7963\%2898\%2900008-6},
633                    }                    }
634    
635  @Article{mol:09,  @Article{mol:09,
636   author         = {Andrea Molod},   author         = {Andrea Molod},
637   year           = 2009,   year           = 2009,
# Line 605  Line 644 
644    
645  %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies  %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
646  %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.  %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.
647  %% (Available from Unidata or in PostScript form by anonymous FTP from  %% (Available from Unidata or in PostScript form by anonymous FTP from
648  %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also  %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also
649  %%   a hypertext version of the User's Guide available at  %%   a hypertext version of the User's Guide available at
650  %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's  %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's
651  %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are  %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are
652  %%   also available.  %%   also available.
653      
654  @incollection{naum-etal:06,  @incollection{naum-etal:06,
655          Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},          Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},
656          Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},          Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},
# Line 642  Line 681 
681    
682  @TechReport{rew:97,  @TechReport{rew:97,
683    author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},    author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
684    title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},    title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},
685                    An Interface for Data Access, Version 3},                    An Interface for Data Access, Version 3},
686    institution =  {Unidata Program Center},    institution =  {Unidata Program Center},
687    type =         {Report},    type =         {Report},
# Line 661  Line 700 
700   volume         = {19},   volume         = {19},
701   pages          = {1586--1605},   pages          = {1586--1605},
702                    }                    }
703    
704  @Article{ros-eta:93,  @Article{ros-eta:93,
705   author         = {N. Rostaing and S. Dalmas and A. Galligo},   author         = {N. Rostaing and S. Dalmas and A. Galligo},
706   year           = 1993,   year           = 1993,
# Line 670  Line 709 
709   volume         = {45A},   volume         = {45A},
710   pages          = {558--568},   pages          = {558--568},
711                    }                    }
712    
713  @incollection{she-and:89,  @incollection{she-and:89,
714   author         = {J. Sheinbaum and D.L.T. Anderson},   author         = {J. Sheinbaum and D.L.T. Anderson},
715   year           = 1989,   year           = 1989,
716   title          = {Assimilation of XBT data using a variational   title          = {Assimilation of XBT data using a variational
717                    technique},                    technique},
718   booktitle      = {Oceanic circulation models:   booktitle      = {Oceanic circulation models:
719                    Combining data and dynamics},                    Combining data and dynamics},
# Line 687  Line 726 
726                    }                    }
727    
728  @article{utke-etal:08,  @article{utke-etal:08,
729          Author = {J. Utke and U. Naumann and M. Fagan and N. Tallent and M. Strout and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch},    Author =       {J. Utke and U. Naumann and M. Fagan and N. Tallent
730          Date-Modified = {2007-11-19 10:15:08 -0500},                    and M. Strout and P. Heimbach and C. Hill and
731          Journal = {{ACM} Transactions on Mathematical Software},                    D. Ozyurt and C. Wunsch},
732          Pages = {~},    Date-Modified ={2007-11-19 10:15:08 -0500},
733          Title = {OpenAD/F: A modular open source tool for automatic differentiation of Fortran codes},    Journal =      {{ACM} Transactions on Mathematical Software},
734          Volume = {34(4)},    Pages =        {~},
735          Year = {2008}}    Title =        {OpenAD/F: A modular open source tool for automatic
736                      differentiation of Fortran codes},
737      Volume =       {34(4)},
738      Year =         2008
739    }
740    
741  @Article{DaSilva94,  @Article{DaSilva94,
742   author         = {A. da Silva and A. C. Young and S. Levitus},   author         = {A. da Silva and A. C. Young and S. Levitus},
# Line 706  Line 749 
749   note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},   note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
750   url            = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},   url            = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
751                    }                    }
752    
753  @techreport{stam-etal:97,  @techreport{stam-etal:97,
754   author         = {D. Stammer and C. Wunsch and R. Giering and   author         = {D. Stammer and C. Wunsch and R. Giering and
755                    Q. Zhang and J. Marotzke and J. Marshall and                    Q. Zhang and J. Marotzke and J. Marshall and
756                    C. Hill},                    C. Hill},
757   year           = 1997,   year           = 1997,
758   title          = {The global ocean circulation estimated from   title          = {The global ocean circulation estimated from
759                    TOPEX/POSEIDON altimetry and a general circulation                    TOPEX/POSEIDON altimetry and a general circulation
760                    model},                    model},
761   institution    = {Center for Global Change Science, Massachusetts   institution    = {Center for Global Change Science, Massachusetts
# Line 722  Line 765 
765   pages          = {40 pp.},   pages          = {40 pp.},
766   address        = {Cambridge (MA), USA},   address        = {Cambridge (MA), USA},
767                    }                    }
768    
769  @ARTICLE{stam-etal:02,  @article{stam-etal:02,
770    author = {D. Stammer and C. Wunsch and R. Giering and C. Eckert and P. Heimbach and J. Marotzke and A. Adcroft and C.N. Hill and J. Marshall},    author =       {D. Stammer and C. Wunsch and R. Giering and
771    title = {The global ocean circulation and transports during 1992 -- 1997, estimated from ocean observations and a general circulation model.},                    C. Eckert and P. Heimbach and J. Marotzke and
772    journal = jgr,                    A. Adcroft and C.N. Hill and J. Marshall},
773    year = {2002a},    title =        {The global ocean circulation and transports during
774    volume = {107(C9)},                    1992 -- 1997, estimated from ocean observations and
775    pages = {3118},                    a general circulation model.},
776    doi   = {10.1029/2001JC000888},    journal =      jgr,
777      year =         {2002a},
778      volume =       {107(C9)},
779      pages =        {3118},
780      doi =          {10.1029/2001JC000888},
781  }  }
782    
783    
# Line 746  Line 793 
793  @Article{tal-cou:87,  @Article{tal-cou:87,
794   author         = {O. Talagrand and P. Courtier},   author         = {O. Talagrand and P. Courtier},
795   year           = 1987,   year           = 1987,
796   title          = {Variational assimilation of meteorological   title          = {Variational assimilation of meteorological
797                    observations with the adjoint vorticity equation.                    observations with the adjoint vorticity equation.
798                    I: Theory},                    I: Theory},
799   journal        = qjrms,   journal        = qjrms,
800   volume         = {113},   volume         = {113},
801   pages          = {1311--1328},   pages          = {1311--1328},
802                    }                    }
803    
804  @Article{tal:97,  @Article{tal:97,
805   author         = {O. Talagrand},   author         = {O. Talagrand},
806   year           = 1997,   year           = 1997,
# Line 762  Line 809 
809   volume         = {75},   volume         = {75},
810   pages          = {191--209},   pages          = {191--209},
811                    }                    }
812    
813  @book{tar:87,  @book{tar:87,
814   author         = {A. Tarantola},   author         = {A. Tarantola},
815   title          = {Inverse Problem Theory: Methods for data fitting   title          = {Inverse Problem Theory: Methods for data fitting
816                    and model parameter estimation},                    and model parameter estimation},
817   year           = 1987,   year           = 1987,
818   publisher      = {Elsevier},   publisher      = {Elsevier},
819   address        = {Amsterdam},   address        = {Amsterdam},
820   pages          = {629 pp.},   pages          = {629 pp.},
821                    }                    }
822                                                                      
823  @techreport{tha:87,  @techreport{tha:87,
824   author         = {W.C. Thacker},   author         = {W.C. Thacker},
825   year           = 1987,   year           = 1987,
# Line 784  Line 831 
831   pages          = {64 pp.},   pages          = {64 pp.},
832   address        = {Geesthacht (D)},   address        = {Geesthacht (D)},
833                    }                    }
834    
835  @Article{tha-lon:88,  @Article{tha-lon:88,
836   author         = {W.C. Thacker and R.B. Long},   author         = {W.C. Thacker and R.B. Long},
837   year           = 1988,   year           = 1988,
# Line 793  Line 840 
840   volume         = {93, C2},   volume         = {93, C2},
841   pages          = {1,227--1,240},   pages          = {1,227--1,240},
842                    }                    }
843    
844  @Article{tha:88,  @Article{tha:88,
845   author         = {W.C. Thacker},   author         = {W.C. Thacker},
846   year           = 1988,   year           = 1988,
# Line 803  Line 850 
850   volume         = {93},   volume         = {93},
851   pages          = {10,655--10,665},   pages          = {10,655--10,665},
852                    }                    }
853    
854  @Article{tha:89,  @Article{tha:89,
855   author         = {W.C. Thacker},   author         = {W.C. Thacker},
856   year           = 1989,   year           = 1989,
# Line 813  Line 860 
860   volume         = {94, C5},   volume         = {94, C5},
861   pages          = {6,177--6,196},   pages          = {6,177--6,196},
862                    }                    }
863    
864  @Article{tha-rag:94,  @Article{tha-rag:94,
865   author         = {W.C. Thacker and R. Raghunath},   author         = {W.C. Thacker and R. Raghunath},
866   year           = 1994,   year           = 1994,
# Line 823  Line 870 
870   volume         = {99, C5},   volume         = {99, C5},
871   pages          = {10,131--10,141},   pages          = {10,131--10,141},
872                    }                    }
873    
874  @Article{tzi-tha:89,  @Article{tzi-tha:89,
875   author         = {E. Tziperman and W.C. Thacker},   author         = {E. Tziperman and W.C. Thacker},
876   year           = {1989},   year           = {1989},
# Line 833  Line 880 
880   volume         = {19},   volume         = {19},
881   pages          = {1471--1485},   pages          = {1471--1485},
882                    }                    }
883    
884  @Article{tzi-eta:92a,  @Article{tzi-eta:92a,
885   author         = {E. Tziperman and W.C. Thacker and R.B. Long and   author         = {E. Tziperman and W.C. Thacker and R.B. Long and
886                    S. Hwang},                    S. Hwang},
# Line 844  Line 891 
891   volume         = {22},   volume         = {22},
892   pages          = {1434--1457},   pages          = {1434--1457},
893                    }                    }
894    
895  @Article{tzi-eta:92b,  @Article{tzi-eta:92b,
896   author         = {E. Tziperman and W.C. Thacker and R.B. Long and   author         = {E. Tziperman and W.C. Thacker and R.B. Long and
897                    S. Hwang and S.R. Rintoul},                    S. Hwang and S.R. Rintoul},
# Line 855  Line 902 
902   volume         = {22},   volume         = {22},
903   pages          = {1458--1485},   pages          = {1458--1485},
904                    }                    }
905    
906  @book{wun:96,  @book{wun:96,
907   author         = {C. Wunsch},   author         = {C. Wunsch},
908   title          = {The ocean circulation inverse problem},   title          = {The ocean circulation inverse problem},
909   year           = 1996,   year           = 1996,
910   publisher      = cup,   publisher      = cup,
911   address        = {Cambridge (UK)},   address        = {Cambridge (UK)},
912   pages          = {442 pp.},   pages          = {442 pp.},
913                    }                    }
914                                                                      
915  @Article{zha-mar:99,  @Article{zha-mar:99,
916   author         = {K.Q. Zhang and J. Marotzke},   author         = {K.Q. Zhang and J. Marotzke},
917   year           = 1999,   year           = 1999,
# Line 950  Line 997 
997  }  }
998    
999  @inproceedings{adcroft:04c,  @inproceedings{adcroft:04c,
1000    author =       {Adcroft, A. and C. Hill and J.-M. Campin and J. Marshall    author =       {Adcroft, A. and C. Hill and J.-M. Campin and J. Marshall
1001                    and P. Heimbach},                    and P. Heimbach},
1002    title =        {Overview of the Formulation and Numerics of the {MIT}GCM},    title =        {Overview of the Formulation and Numerics of the {MIT}GCM},
1003    booktitle =   {Proceedings of the ECMWF seminar series on Numerical Methods,    booktitle =   {Proceedings of the ECMWF seminar series on Numerical Methods,
1004                   Recent developments in numerical methods for atmosphere and                   Recent developments in numerical methods for atmosphere and
1005                   ocean modelling},                   ocean modelling},
1006    year =         2004,    year =         2004,
1007    pages =        {139-149},    pages =        {139-149},
# Line 974  Line 1021 
1021  }  }
1022    
1023  @Article{visbeck:97,  @Article{visbeck:97,
1024    author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall},    author =       {M. Visbeck and J. Marshall and T. Haine and M. Spall},
1025    title =        {Specification of eddy transfer coefficients in    title =        {Specification of eddy transfer coefficients in coarse-resolution ocean circulation models},
                   coarse-resolution ocean circulation models},  
1026    journal =      jpo,    journal =      jpo,
1027    year =         1997,    year =         1997,
1028    volume =       27,    volume =       27,
# Line 1116  Line 1162 
1162    
1163  @Article{griffies:00,  @Article{griffies:00,
1164    author =       {Griffies, S.,M. and Hallberg, R.,W.},    author =       {Griffies, S.,M. and Hallberg, R.,W.},
1165    title =        {Biharmonic friction with a Smagorinsky-like viscosity for    title =        {Biharmonic friction with a {Smagorinsky}-like viscosity for
1166                    use in large-scale eddy-permitting ocean models},                    use in large-scale eddy-permitting ocean models},
1167    journal =      mwr,    journal =      mwr,
1168    year =         2000,    year =         2000,
# Line 1145  Line 1191 
1191    pages =        {221-244}    pages =        {221-244}
1192  }  }
1193    
1194    @Article{Cox87,
1195      author =       {M. D. Cox},
1196      title =        {An isopycnal diffusion in a z-coordinate ocean model},
1197      journal =      {Ocean modelling},
1198      year =         1987,
1199      volume =       74,
1200      pages =        {1-5 (Unpublished manuscript)}
1201    }
1202    
1203    @Article{gretal:98,
1204      author =       {S. M. Griffies and A. Gnanadesikan and R. C. Pacanowski and V. Larichev and J.  K. Dukowicz and R. D. Smith},
1205      title =        {Isoneutral diffusion in a z-coordinate ocean model},
1206      journal =      jpo,
1207      year =         1998,
1208      volume =       28,
1209      pages =        {805-830}
1210    }
1211    
1212    @ARTICLE{gr:98,
1213      author =       {S. M. Griffies},
1214      title =        {The {Gent-McWilliams} Skew Flux},
1215      journal =      jpo,
1216      year =         1998,
1217      volume =       28,
1218      pages =        {831-841}
1219    }
1220    
1221    
1222    @Article{gkw:91,
1223      author =       {R. Gerdes and C. Koberle and J. Willebrand},
1224      title =        {The influence of numerical advection schemes on the results of ocean general circulation models},
1225      journal =      climd,
1226      year =         1991,
1227      volume =       5,
1228      number =       4,
1229      pages =        {211-226},
1230      doi   =        {10.1007/BF00210006}
1231    }
1232    
1233  @Article{dm:95,  @Article{dm:95,
1234    author =       {Danabasoglu, G. and McWilliams J.C.},    author =       {G. Danabasoglu and J. C. McWilliams},
1235    title =        {Sensitivity of the global ocean circulation to parameterizations of mesoscale tracer transports},    title =        {Sensitivity of the global ocean circulation to parameterizations of mesoscale tracer transports},
1236    journal =      jclim,    journal =      jclim,
1237    year =         1995,    year =         1995,
# Line 1155  Line 1240 
1240    pages =        {2967-2987}    pages =        {2967-2987}
1241  }  }
1242    
 @Article{ldd:97,  
   author =       {Large, W.G. and Danabasoglu, G. and Doney, S.C. and McWilliams, J.C.},  
   title =        {Sensitivity to surface forcing and boundary layer mixing in a global ocean model: Annual-mean climatology},  
   journal =      jpo,  
   year =         1997,  
   volume =       27,  
   number =       11,  
   pages =        {2418-2447}  
 }  
   
1243  @Article{gkw:99,  @Article{gkw:99,
1244    author =       {Gerdes R. and Koberle C. and Beckmann A. and Herrmann P. and Willebrand J.},    author =       {R. Gerdes and C. Koberle and A. Beckmann and P. Herrmann and J. Willebrand},
1245    title =        {Mechanisms for spreading of Mediterranean water in    title =        {Mechanisms for spreading of Mediterranean water in coarse-resolution numerical models},
                   coarse-resolution numerical models},  
1246    journal =      jpo,    journal =      jpo,
1247    year =         1999,    year =         1999,
1248    volume =       29,    volume =       29,
# Line 1202  Line 1276 
1276  @Article{molteni:03,  @Article{molteni:03,
1277    author =       {F. Molteni},    author =       {F. Molteni},
1278    title =        {Atmospheric simulations using a {GCM} with simplified physical    title =        {Atmospheric simulations using a {GCM} with simplified physical
1279                    parametrization, {I}: Model climatology and variability in                    parametrization, {I}: Model climatology and variability in
1280                    multidecadal experiments},                    multidecadal experiments},
1281    journal =      climd,    journal =      climd,
1282    year =         2003,    year =         2003,
# Line 1300  Line 1374 
1374    PAGES       = "525-531"    PAGES       = "525-531"
1375  }  }
1376    
1377  @ARTICLE{hib79,  @ARTICLE{hib79,
1378    author =       {Hibler, III, W. D.},    author =       {Hibler, III, W. D.},
1379    TITLE       = "A Dynamic Thermodynamic Sea Ice Model",    TITLE       = "A Dynamic Thermodynamic Sea Ice Model",
1380    JOURNAL     = jpo,    JOURNAL     = jpo,
# Line 1359  Line 1433 
1433    
1434  @TechReport{Dutkiewicz_etal_05,  @TechReport{Dutkiewicz_etal_05,
1435    author =       {S. Dutkiewicz and A. Sokolov and J. Scott and P. Stone},    author =       {S. Dutkiewicz and A. Sokolov and J. Scott and P. Stone},
1436    title =        {A Three-Dimensional Ocean-Seaice-Carbon Cycle Model and    title =        {A Three-Dimensional Ocean-Seaice-Carbon Cycle Model and
1437                    its Coupling to a Two-Dimensional Atmospheric Model: Uses                    its Coupling to a Two-Dimensional Atmospheric Model: Uses
1438                    in Climate Change Studies, Report 122},                    in Climate Change Studies, Report 122},
1439    institution =  {MIT Joint Program of the Science and Policy of Global Change},    institution =  {MIT Joint Program of the Science and Policy of Global Change},
1440    year =         {2005},    year =         {2005},
# Line 1383  Line 1457 
1457    
1458  @Article{McKinley_etal_04,  @Article{McKinley_etal_04,
1459    author =       {G. McKinley and M. J. Follows and J. C. Marshall},    author =       {G. McKinley and M. J. Follows and J. C. Marshall},
1460    title =        {Mechanisms of air-sea CO$_2$ flux variability in the    title =        {Mechanisms of air-sea CO$_2$ flux variability in the
1461                    Equatorial Pacific and the North Atlantic},                    Equatorial Pacific and the North Atlantic},
1462    journal =      {Global Biogeochemical Cycles},    journal =      {Global Biogeochemical Cycles},
1463    year =         {2004},    year =         {2004},
# Line 1425  Line 1499 
1499   editor       = {Pfafflin and Zeigler},   editor       = {Pfafflin and Zeigler},
1500   publisher    = {Gordon and Breach, Scientific Publishers}   publisher    = {Gordon and Breach, Scientific Publishers}
1501  }  }
1502    
1503  @Article{chou:92,  @Article{chou:92,
1504   author       = {M-D. Chou},   author       = {M-D. Chou},
1505   year         = {1992},   year         = {1992},
1506   title        = {A solar radiation model for use in climate studies.},   title        = {A solar radiation model for use in climate studies.},
1507   journal      = jas,   journal      = jas,
1508   volume       = {49},   volume       = {49},
1509   pages        = {762-772}   pages        = {762-772}
1510  }  }
# Line 1450  Line 1524 
1524   year         = {1994},   year         = {1994},
1525   title        = {An efficient thermal infrared radiation parameterization   title        = {An efficient thermal infrared radiation parameterization
1526  for use in general circulation models},  for use in general circulation models},
1527   institution  = {National Aeronautics and Space Administration},   institution  = {National Aeronautics and Space Administration},
1528   type         = {NASA Technical Memorandum},   type         = {NASA Technical Memorandum},
1529   number       = {104606-Vol 3},   number       = {104606-Vol 3},
1530   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1531   note         = {http://www.gmao.nasa.gov/}   note         = {http://www.gmao.nasa.gov/}
1532  }  }
# Line 1461  for use in general circulation models}, Line 1535  for use in general circulation models},
1535   author       = {R. H. Clarke},   author       = {R. H. Clarke},
1536   year         = {1970},   year         = {1970},
1537   title        = {Observational studies in the atmospheric boundary layer.},   title        = {Observational studies in the atmospheric boundary layer.},
1538   journal      = qjrms,   journal      = qjrms,
1539   volume       = {96},   volume       = {96},
1540   pages        = {91-114}   pages        = {91-114}
1541  }  }
# Line 1472  for use in general circulation models}, Line 1546  for use in general circulation models},
1546   title        = {NDVI-derived Land Cover Classification at Global Scales. },   title        = {NDVI-derived Land Cover Classification at Global Scales. },
1547   journal      = {Int'l J. Rem. Sens.} ,   journal      = {Int'l J. Rem. Sens.} ,
1548   volume       = {15},   volume       = {15},
1549   pages        = {3567-3586}   pages        = {3567-3586}
1550  }  }
1551    
1552  @Article{dorsell:89,  @Article{dorsell:89,
1553   author       = { J. L. Dorman and P. J. Sellers},   author       = { J. L. Dorman and P. J. Sellers},
1554   year         = {1989},   year         = {1989},
1555   title        = {A global climatology of albedo, roughness length and stomatal   title        = {A global climatology of albedo, roughness length and stomatal
1556  resistance for atmospheric general circulation models as represented by the Simple Biosphere model (SiB).},  resistance for atmospheric general circulation models as represented by the Simple Biosphere model (SiB).},
1557   journal      = jam,   journal      = jam,
1558   volume       = {28},   volume       = {28},
1559   pages        = {833-855}   pages        = {833-855}
1560  }  }
# Line 1490  resistance for atmospheric general circu Line 1564  resistance for atmospheric general circu
1564   year         = {1988},   year         = {1988},
1565   title        = { Design of a non-singular level 2.5 second-order closure   title        = { Design of a non-singular level 2.5 second-order closure
1566  model for the prediction of atmospheric turbulence. },  model for the prediction of atmospheric turbulence. },
1567   journal      = jas,   journal      = jas,
1568   volume       = {45},   volume       = {45},
1569   pages        = {113-132}   pages        = {113-132}
1570  }  }
# Line 1520  Continental Moisture Budget of the Unite Line 1594  Continental Moisture Budget of the Unite
1594   author       = {J. Kondo},   author       = {J. Kondo},
1595   year         = {1975},   year         = {1975},
1596   title        = {Air-sea bulk transfer coefficients in diabatic conditions.},   title        = {Air-sea bulk transfer coefficients in diabatic conditions.},
1597   journal      = blm,   journal      = blm,
1598   volume       = {9},   volume       = {9},
1599   pages        = {91-112}   pages        = {91-112}
1600  }  }
# Line 1529  Continental Moisture Budget of the Unite Line 1603  Continental Moisture Budget of the Unite
1603   author       = { Randal D. Koster and Max J. Suarez},   author       = { Randal D. Koster and Max J. Suarez},
1604   year         = {1991},   year         = {1991},
1605   title        = { A Simplified Treatment of SiB's Land Surface Albedo Parameterization.},   title        = { A Simplified Treatment of SiB's Land Surface Albedo Parameterization.},
1606   institution  = {National Aeronautics and Space Administration},   institution  = {National Aeronautics and Space Administration},
1607   type         = {NASA Technical Memorandum},   type         = {NASA Technical Memorandum},
1608   number       = {104538},   number       = {104538},
1609   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1610   note         = {http://www.gmao.nasa.gov/},   note         = {http://www.gmao.nasa.gov/},
1611  }  }
# Line 1551  in Climate Models as a Composite of Inde Line 1625  in Climate Models as a Composite of Inde
1625   year         = {1974},   year         = {1974},
1626   title        = { A parameterization for the absorption of solar radiation   title        = { A parameterization for the absorption of solar radiation
1627  in the Earth's atmosphere.  },  in the Earth's atmosphere.  },
1628   journal      = jas,   journal      = jas,
1629   volume       = {31},   volume       = {31},
1630   pages        = {118-133}   pages        = {118-133}
1631  }  }
# Line 1560  in the Earth's atmosphere.  }, Line 1634  in the Earth's atmosphere.  },
1634   author       = {W. G. Large and S. Pond},   author       = {W. G. Large and S. Pond},
1635   year         = {1981},   year         = {1981},
1636   title        = {Open ocean momentum flux measurements in moderate to strong winds.},   title        = {Open ocean momentum flux measurements in moderate to strong winds.},
1637   journal      = jpo,   journal      = jpo,
1638   volume       = {11},   volume       = {11},
1639   pages        = {324-336}   pages        = {324-336}
1640  }  }
# Line 1570  in the Earth's atmosphere.  }, Line 1644  in the Earth's atmosphere.  },
1644   year         = {1992},   year         = {1992},
1645   title        = {  Relaxed Arakawa Schubert: A parameterization of moist   title        = {  Relaxed Arakawa Schubert: A parameterization of moist
1646  convection for general circulation models.},  convection for general circulation models.},
1647   journal      = mwr,   journal      = mwr,
1648   volume       = {120},   volume       = {120},
1649   pages        = {978-1002}   pages        = {978-1002}
1650  }  }
# Line 1588  convection for general circulation model Line 1662  convection for general circulation model
1662   author       = {R. W. Reynolds and T. M. Smith},   author       = {R. W. Reynolds and T. M. Smith},
1663   year         = {1994},   year         = {1994},
1664   title        = {Improved global sea surface temperature analyses using optimum interpolation.},   title        = {Improved global sea surface temperature analyses using optimum interpolation.},
1665   journal      = jclim,   journal      = jclim,
1666   volume       = {7},   volume       = {7},
1667   pages        = {929-948}   pages        = {929-948}
1668  }  }
# Line 1598  convection for general circulation model Line 1672  convection for general circulation model
1672   year         = {1987},   year         = {1987},
1673   title        = {  A computation of the stratospheric   title        = {  A computation of the stratospheric
1674  diabatic circulation using an accurate radiative transfer model},  diabatic circulation using an accurate radiative transfer model},
1675   journal      = jas,   journal      = jas,
1676   volume       = {44},   volume       = {44},
1677   pages        = {859-876}   pages        = {859-876}
1678  }  }
# Line 1608  diabatic circulation using an accurate r Line 1682  diabatic circulation using an accurate r
1682   year         = {1988},   year         = {1988},
1683   title        = {  The roles of dry convection, cloud-radiation feedback processes   title        = {  The roles of dry convection, cloud-radiation feedback processes
1684  and the influence of recent improvements in the parameterization of convection in the GLA GCM.  },  and the influence of recent improvements in the parameterization of convection in the GLA GCM.  },
1685   journal      = mwr,   journal      = mwr,
1686   volume       = {116},   volume       = {116},
1687   pages        = {2366-2387}   pages        = {2366-2387}
1688  }  }
# Line 1618  and the influence of recent improvements Line 1692  and the influence of recent improvements
1692   year         = {1996},   year         = {1996},
1693   title        = {  Dynamical aspects of climate simulations Using the GEOS   title        = {  Dynamical aspects of climate simulations Using the GEOS
1694  General Circulation Model},  General Circulation Model},
1695   institution  = {National Aeronautics and Space Administration},   institution  = {National Aeronautics and Space Administration},
1696   type         = {NASA Technical Memorandum},   type         = {NASA Technical Memorandum},
1697   number       = {104606 Volume 10},   number       = {104606 Volume 10},
1698   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1699   note         = {http://www.gmao.nasa.gov/},   note         = {http://www.gmao.nasa.gov/},
1700  }  }
# Line 1630  General Circulation Model}, Line 1704  General Circulation Model},
1704   year         = {1974},   year         = {1974},
1705   title        = {Heat and mass transfer between a rough wall and   title        = {Heat and mass transfer between a rough wall and
1706  turbulent fluid flow at high Reynolds and Peclet numbers.  },  turbulent fluid flow at high Reynolds and Peclet numbers.  },
1707   journal      = jfm,   journal      = jfm,
1708   volume       = {62},   volume       = {62},
1709   pages        = {601-623}   pages        = {601-623}
1710  }  }
# Line 1640  turbulent fluid flow at high Reynolds an Line 1714  turbulent fluid flow at high Reynolds an
1714   year         = {1977},   year         = {1977},
1715   title        = {  A numerical experiment on pollutant dispersion in a horizontally-homogenious   title        = {  A numerical experiment on pollutant dispersion in a horizontally-homogenious
1716  atmospheric boundary layer.},  atmospheric boundary layer.},
1717   journal      = {Atmos. Environ.},   journal      = {Atmos. Environ.},
1718   volume       = {11},   volume       = {11},
1719   pages        = {1015-1024}   pages        = {1015-1024}
1720  }  }
# Line 1649  atmospheric boundary layer.}, Line 1723  atmospheric boundary layer.},
1723   author       = {J. Zhou and Y.C. Sud and K.-M. Lau},   author       = {J. Zhou and Y.C. Sud and K.-M. Lau},
1724   year         = {1995},   year         = {1995},
1725   title        = {Impact of Orographically Induced Gravity Wave Drag in the GLA GCM},   title        = {Impact of Orographically Induced Gravity Wave Drag in the GLA GCM},
1726   journal      = qjrms,   journal      = qjrms,
1727   volume       = {122},   volume       = {122},
1728   pages        = {903-927}   pages        = {903-927}
1729  }  }
1730    
1731  @Article{breth:99,  @Article{breth:99,
1732   author         = {C. S. Bretherton and M.K. MacVean and P. Bechtold and A. Chlond   author         = {C. S. Bretherton and M.K. MacVean and P. Bechtold and A. Chlond
1733                     and W.R. Cotton and J. Cuxart and H. Cuijpers and M. Khairoutdinov                     and W.R. Cotton and J. Cuxart and H. Cuijpers and M. Khairoutdinov
1734                     and B. Kosovic and D. Lewellen and C-H. Moeng and P. Siebesma and                     and B. Kosovic and D. Lewellen and C-H. Moeng and P. Siebesma and
1735                     B. Stevens and D.E. Stevens and I. Sykes and M.C. Wyant},                     B. Stevens and D.E. Stevens and I. Sykes and M.C. Wyant},
1736   year           = 1999,   year           = 1999,
1737   title          = {An intercomparison of radiatively driven entrainment and turbulence   title          = {An intercomparison of radiatively driven entrainment and turbulence
1738                    in a smoke cloud, as simulated by different numerical models.},                    in a smoke cloud, as simulated by different numerical models.},
1739   journal        = qjrms,   journal        = qjrms,
1740   volume         = {125},   volume         = {125},
1741   pages          = {391-423}   pages          = {391-423}
1742                    }                    }
1743    
1744  @Article{bm:99,  @Article{bm:99,
1745   author         = {A. C. Bushell and G.M. Martin},   author         = {A. C. Bushell and G.M. Martin},
1746   year           = 1999,   year           = 1999,
1747   title          = {The Impact of Vertical Resolution Upon GCM Simulations of Marine Stratocumulus.},   title          = {The Impact of Vertical Resolution Upon GCM Simulations of Marine Stratocumulus.},
1748   journal        = {Climate Dyn.},   journal        = {Climate Dyn.},
1749   volume         = {15},   volume         = {15},
1750   pages          = {293-318}   pages          = {293-318}
1751                    }                    }
1752    
1753  @Article{Inn:01,  @Article{Inn:01,
1754   author         = {P. M. Inness and S.J. Slingo and R.B. Woolnough and B. Neale and V.D. Pope},   author         = {P. M. Inness and S.J. Slingo and R.B. Woolnough and B. Neale and V.D. Pope},
1755   year           = 2001,   year           = 2001,
1756   title          = {Organization of Tropical Convection in a GCM with Verying Vertical Resolution;   title          = {Organization of Tropical Convection in a GCM with Verying Vertical Resolution;
1757                    Implications for the Simulation of the Madden-Julian Oscillation.},                    Implications for the Simulation of the Madden-Julian Oscillation.},
1758   journal        = {Climate Dyn.},   journal        = {Climate Dyn.},
1759   volume         = {17},   volume         = {17},
1760   pages          = {777-794}   pages          = {777-794}
1761                    }                    }
1762    
1763  @Article{kal:89,  @Article{kal:89,
1764   author         = {E. Kalnay and M. Kanamitsu and J. Pfaendtner and J. Sela and M. Suarez and   author         = {E. Kalnay and M. Kanamitsu and J. Pfaendtner and J. Sela and M. Suarez and
1765                     J. Stackpole and J. Tucillo and L. Umscheid and and D. Williamson},                     J. Stackpole and J. Tucillo and L. Umscheid and and D. Williamson},
1766   year           = 1989,   year           = 1989,
1767   title          = {Rules for Interchange of Physical Parameterizations.},   title          = {Rules for Interchange of Physical Parameterizations.},
1768   journal        = bams,   journal        = bams,
1769   volume         = {70},   volume         = {70},
1770   pages          = {620-622}   pages          = {620-622}
1771                    }                    }
1772    
1773  @Article{wo:98,  @Article{wo:98,
1774   author         = {D. Williamson and J.G. Olsen},   author         = {D. Williamson and J.G. Olsen},
1775   year           = 1998,   year           = 1998,
1776   title          = {A Comparison of Semi-Langrangian and Eulerian Polar Climate Simulations.},   title          = {A Comparison of Semi-Langrangian and Eulerian Polar Climate Simulations.},
1777   journal        = mwr,   journal        = mwr,
1778   volume         = {126},   volume         = {126},
1779   pages          = {991-1000}   pages          = {991-1000}
1780                    }                    }
1781    
# Line 1818  atmospheric boundary layer.}, Line 1892  atmospheric boundary layer.},
1892    number =       {393--426}    number =       {393--426}
1893  }  }
1894    
1895  @ARTICLE{menemenlis05,  @Article{menemenlis05,
1896    author =       {D. Menemenlis and C. Hill and A. Adcroft and    author =       {D. Menemenlis and C. Hill and A. Adcroft and
1897                    J.-M. Campin and B. Cheng and B. Ciotti and                    J.-M. Campin and B. Cheng and B. Ciotti and
1898                    I. Fukumori and A. Koehl and P. Heimbach and                    I. Fukumori and A. Koehl and P. Heimbach and
# Line 1925  atmospheric boundary layer.}, Line 1999  atmospheric boundary layer.},
1999    pages =        {1787--1800}    pages =        {1787--1800}
2000  }  }
2001    
2002    @Article{hutchings04,
2003      author =       {Jennifer K. Hutchings and Hrvoje Jasak and Seymour
2004                      W. Laxon},
2005      title =        {A Strength Implicit Correction Scheme for the
2006                      Viscous-Plastic Sea Ice Model},
2007      journal =      om,
2008      year =         2004,
2009      volume =       7,
2010      number =       {1--2},
2011      pages =        {111-133},
2012      doi =          {10.1016/S1463-5003(03)00040-4}
2013    }
2014    
2015  @Article{jenkins01,  @Article{jenkins01,
2016    author =       {Adrian Jenkins and Hartmut H. Hellmer and David    author =       {Adrian Jenkins and Hartmut H. Hellmer and David
2017                    M. Holland},                    M. Holland},
# Line 1936  atmospheric boundary layer.}, Line 2023  atmospheric boundary layer.},
2023    volume =       31,    volume =       31,
2024    pages =        {285--296}}    pages =        {285--296}}
2025    
2026    @Article{kalnay96,
2027      author =       {E. Kalnay and M. Kanamitsu and R. Kistler and
2028                      W. Collins and D. Deaven and L. Gandin and
2029                      M. Iredell and S. Saha and G. White and J. Woollen
2030                      and Y. Zhu and M. Chelliah and W. Ebisuzaki and
2031                      W. Higgins and J. Janowiak and K. C. Mo and
2032                      C. Ropelewski and J. Wang and A. Leetmaa and
2033                      R. Reynolds and R. Jenne and D. Joseph},
2034      title =        {The {NMC/NCAR} 40-Year Reanalysis Project},
2035      journal =      bams,
2036      year =         1996,
2037      volume =       77,
2038      pages =        {437--471}
2039    }
2040    
2041    @Article{kimmritz15,
2042      author =       {Madlen Kimmritz and Sergey Danilov and Martin Losch},
2043      title =        {On the Convergence of the Modified
2044                      Elastic-Viscous-Plastic Method of Solving for
2045                      Sea-Ice Dynamics},
2046      journal =      jcp,
2047      year =         2015,
2048      volume =       296,
2049      pages =        {90--100},
2050      doi =          {10.1016/j.jcp.2015.04.051}}
2051    
2052    @Article{klymaklegg10,
2053      author =       {Klymak, Jody M. and Sonya M. Legg},
2054      title =        {A simple mixing scheme for models that resolve
2055                      breaking internal waves},
2056      journal =      om,
2057      year =         2010,
2058      volume =       33,
2059      pages =        {224--234},
2060      doi =          {10.1016/j.ocemod.2010.02.005}
2061    }
2062    
2063  @Article{losch08,  @Article{losch08,
2064    author =       {Martin Losch},    author =       {Martin Losch},
2065    title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean    title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean
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2071    doi =          {10.1029/2007JC004368}    doi =          {10.1029/2007JC004368}
2072  }  }
2073    
2074    @Article{losch10:_mitsim,
2075      author =       {Losch, Martin and Menemenlis, Dimitris and Campin,
2076                      Jean-Michel and Heimbach, Patrick and Hill, Chris},
2077      title =        {On the formulation of sea-ice models. {P}art 1:
2078                      Effects of different solver implementations and
2079                      parameterizations},
2080      journal =      om,
2081      year =         2010,
2082      volume =       33,
2083      number =       {1--2},
2084      pages =        {129--144},
2085      doi =          {10.1016/j.ocemod.2009.12.008}
2086    }
2087    
2088    @Article{losch14:_jfnk,
2089      author =       {Martin Losch and Annika Fuchs and
2090                      Jean-Fran{\c{c}}ois Lemieux and Anna Vanselow},
2091      title =        {A Parallel {J}Acobian-Free {N}ewton-{K}rylov Solver
2092                      for a Coupled Sea Ice-Ocean Model },
2093      journal =      jcp,
2094      volume =       {257},
2095      number =       {A},
2096      pages =        {901--910},
2097      year =         {2014},
2098      doi =          {10.1016/j.jcp.2013.09.026}
2099    }
2100    
2101    @Article{lemieux09,
2102      author =       {Jean-Fran{\c{c}}ois Lemieux and Bruno Tremblay},
2103      title =        {Numerical Convergence of Viscous-Plastic Sea Ice
2104                      Models},
2105      journal =      jgr,
2106      year =         2009,
2107      volume =       114,
2108      number =       {C05009},
2109      doi =          {10.1029/2008JC005017}}
2110    
2111    @Article{lemieux10,
2112      author =       {Jean-Fran{\c{c}}ois Lemieux and Bruno Tremblay and Jan
2113                      Sedl{\'a}{\v{c}}ek and Paul Tupper and Stephen
2114                      Thomas and David Huard and Jean-Pierre Auclair},
2115      title =        {Improving the Numerical Convergence of
2116                      Viscous-Plastic Sea Ice Models with the
2117                      {J}acobian-Free {N}ewton-{K}rylov Method},
2118      journal =      jcp,
2119      year =         2010,
2120      volume =       229,
2121      pages =        {2840--2852},
2122      doi =          {10.1016/j.jcp.2009.12.011c}}
2123    
2124    @Article{lemieux12,
2125      author =       {Jean-Fran{\c{c}}ois Lemieux and Dana Knoll and Bruno
2126                      Tremblay and David M. Holland and Martin Losch},
2127      title =        {A Comparison of the {J}acobian-free
2128                      {N}ewton-{K}rylov Method and the {EVP} Model for
2129                      Solving the Sea Ice Momentum Equation with a
2130                      Viscous-Plastic Formulation: a Serial Algorithm
2131                      Study},
2132      journal =      jcp,
2133      year =         2012,
2134      volume =       231,
2135      number =       17,
2136      pages =        {5926--5944},
2137      doi =          {10.1016/j.jcp.2012.05.024}}
2138    
2139    @article{knoll04:_jfnk,
2140      Author =       {D.A. Knoll and D.E. Keyes},
2141      Title =        {{J}acobian-free {N}ewton-{K}rylov Methods: a Survey
2142                      of Approaches and Applications},
2143      Journal =      jcp,
2144      Year =         2004,
2145      Volume =       193,
2146      Pages =        {357--397},
2147      doi =          {10.1016/j.jcp.2003.08.010},
2148    }
2149    
2150    @Article{saad93:_fgmres,
2151      author =       {Y. Saad},
2152      title =        {A Flexible Inner-Outer Preconditioned {GMRES}
2153                      Method},
2154      journal =      siscicom,
2155      year =         1993,
2156      volume =       14,
2157      number =       2,
2158      pages =        {461--469}}
2159    
2160  @Article{Dutay02,  @Article{Dutay02,
2161   author         = {Dutay, J.-C. and J.L. Bullister and S.C. Doney and J.C. Orr   author         = {Dutay, J.-C. and J.L. Bullister and S.C. Doney and J.C. Orr
2162      and R. Najjar and K. Caldeira and J.-M. Campin and H. Drange and M. Follows      and R. Najjar and K. Caldeira and J.-M. Campin and H. Drange and M. Follows
# Line 1963  atmospheric boundary layer.}, Line 2173  atmospheric boundary layer.},
2173                  }                  }
2174    
2175  @Article{marsh06,  @Article{marsh06,
2176   author         = {Marshall, John and Emily Shuckburgh and Helen Jones and Chris Hill},   author         = {Marshall, John and Emily Shuckburgh and Helen Jones and Chris Hill},
2177   year           = 2006,   year           = 2006,
2178   title          = {Estimates and Implications of Surface Eddy Diffusivity   title          = {Estimates and Implications of Surface Eddy Diffusivity
2179                     in the Southern Ocean Derived from Tracer Transport},                     in the Southern Ocean Derived from Tracer Transport},
2180   journal        = jpo,   journal        = jpo,
2181   volume         = {36},          number= {},             month   = {},   volume         = {36},          number= {},             month   = {},
# Line 1988  atmospheric boundary layer.}, Line 2198  atmospheric boundary layer.},
2198    journal =      {Geophys. Astrophys. Fl. Dyn.},    journal =      {Geophys. Astrophys. Fl. Dyn.},
2199    year =         1990,    year =         1990,
2200    volume =       51,    volume =       51,
2201    pages =        {103--133}}    pages =        {103--133}
2202    }
2203    
2204    
2205    @Article{moum96,
2206      author        = {Moum, J.N.},
2207      title         = {Energy-containing scales of turbulence in the ocean thermocline},
2208      journal       = jgr,
2209      year          = 1996,
2210      volume        = {101 (C3)},
2211      pages         = {14095--14109}
2212    }
2213    
2214    @Article{seimgregg94,
2215      author        = {Seim, Harvey E. and Michael C. Gregg},
2216      title         = {Detailed observations of a naturally occurring shear instability},
2217      journal       = jgr,
2218      year          = 1994,
2219      volume        = {99 (C5)},
2220      pages         = {10049--10073},
2221    }
2222    
2223    @Article{thorpe77,
2224      author        = {Thorpe, S.A.},
2225      title         = {Turbulence and mixing in a Scottish loch},
2226      journal       = ptrsl,
2227      year          = 1977,
2228      volume        = {286},
2229      pages         = {125--181}
2230    }
2231    
2232    @Article{wesson94,
2233      author        = {Wesson, J. C. and  Michael C. Gregg},
2234      title         = {Mixing at Camarinal Sill in the Strait of Gibraltar},
2235      journal       = jgr,
2236      year          = 1994,
2237      volume        = {99 (C5)},
2238      pages         = { 9847--9878}
2239    }
2240    
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