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revision 1.32 by heimbach, Thu Jan 17 21:13:04 2008 UTC revision 1.40 by jmc, Mon Aug 30 23:01:09 2010 UTC
# Line 1  Line 1 
1    @string{angl    = {Ann.\ Glaciol.}}
2  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}
3  @string{bams    = {Bull.~Am.~Met.~Soc.}}  @string{bams    = {Bull.~Am.~Met.~Soc.}}
4  @string{blm     = {Bound.~Layer~Meteorol.}}  @string{blm     = {Bound.~Layer~Meteorol.}}
5  @string{climd   = {Clim.~Dynamics}}  @string{climd   = {Clim.~Dynamics}}
6    @string{cch     = {Clim.\ Change}}
7  @string{jgr     = {J.~Geophys.~Res.}}  @string{jgr     = {J.~Geophys.~Res.}}
8  @string{ijrs    = {Int.~J.~Remote Sensing}}  @string{ijrs    = {Int.~J.~Remote Sensing}}
9  @string{jas     = {J.~Atmos.~Sci.}}  @string{jas     = {J.~Atmos.~Sci.}}
# Line 32  Line 34 
34  @string{estec   = {European Space Research and Technology Centre  @string{estec   = {European Space Research and Technology Centre
35                          (ESTEC)}}                          (ESTEC)}}
36  @string{esa     = {European Space Agency (ESA)}}  @string{esa     = {European Space Agency (ESA)}}
37    @string{eos     = {Eos~Trans.\ AGU}}
38    
39  @Article{bis-eta:92,  @Article{bis-eta:92,
40   author         = {C.H. Bishof and G.F. Corliss and L. Green and   author         = {C.H. Bishof and G.F. Corliss and L. Green and
# Line 131  Line 134 
134   pages          = {1367--1387},   pages          = {1367--1387},
135                    }                    }
136    
137    @ARTICLE{durr:91,
138      author = {Dale R. Durran},
139      title = {The Third-Order Adams-Bashforth Method: An Attractive Alternative
140               to Leapfrog Time Differencing},
141      journal = mwr,
142      year = {1991},
143      volume = {119},
144      pages  = {702-720},
145    }
146    
147    
148  @ARTICLE{dutk-etal:06,  @ARTICLE{dutk-etal:06,
149    author = {S. Dutkiewicz and M.J. Follows and P. Heimbach and J. Marshall},    author = {S. Dutkiewicz and M.J. Follows and P. Heimbach and J. Marshall},
150    title = {Controls on ocean productivity and air-sea carbon flux:    title = {Controls on ocean productivity and air-sea carbon flux:
# Line 202  Line 216 
216   note           = {in press},   note           = {in press},
217                    }                    }
218    
219    @Article{fer-eta:05,
220     author         = {D. Ferreira and J. Marshall and P. Heimbach},
221     year           = 2005,
222     title          = {Estimating Eddy Stresses by Fitting Dynamics to Observations
223                       using a Residual-Mean Ocean Circulation Model and Its Adjoint},
224     journal        = jpo,
225     volume         = {35},
226     pages          = {1891--1910},
227                      }
228    
229    @Article{gas-eta:90,
230     author         = {P. Gaspar and Y. Gr\'egoris and J.-M. Lefevre},
231     year           = 1990,
232     title          = {A Simple Eddy Kinetic Energy Model for Simulations of the
233                       Oceanic Vertical Mixing: Tests at Station Papa and Long-Term
234                       Upper Ocean Study Site},
235     journal        = jgr,
236     volume         = {95 (C9)},
237     pages          = {16,179--16,193},
238                      }
239    
240  @Article{gen-mcw:90,  @Article{gen-mcw:90,
241   author         = {P.R. Gent and J.C. McWilliams},   author         = {P.R. Gent and J.C. McWilliams},
242   year           = 1990,   year           = 1990,
# Line 351  Line 386 
386                    }                    }
387    
388  @ARTICLE{hib80,  @ARTICLE{hib80,
389    AUTHOR      = "W. D. {Hibler, III}",    author =       {Hibler, III, William D.},
390    TITLE       = "Modeling a Variable Thickness Sea Ice Cover",    TITLE       = "Modeling a Variable Thickness Sea Ice Cover",
391    JOURNAL     = mwr,    JOURNAL     = mwr,
392    YEAR        = 1980,    YEAR        = 1980,
# Line 543  Line 578 
578   pages          = {5,753--5,766},   pages          = {5,753--5,766},
579                    }                    }
580    
581  @Article{mars-sha:98,  @Article{mars-eta:98,
582   author         = {J. Marshall and H. Jones and C. Hill},   author         = {J. Marshall and H. Jones and C. Hill},
583   year           = 1998,   year           = 1998,
584   title          = {Efficient ocean modeling using   title          = {Efficient ocean modeling using
# Line 555  Line 590 
590   doi            = {10.1016/S0924-7963\%2898\%2900008-6},   doi            = {10.1016/S0924-7963\%2898\%2900008-6},
591                    }                    }
592    
593  @Article{mcw:96,  @Article{mol:09,
594   author         = {J. McWilliams},   author         = {Andrea Molod},
595   year           = 1996,   year           = 2009,
596   title          = {Modeling the oceanic general circulation},   title          = {Running {GCM} physics and dynamics on different grids:
597   journal        = arfm,                     algorithm and tests},
598   volume         = {28},   journal        = tel,
599   pages          = {215--248},   volume         = {61A},
600     pages          = {381--393},
601                    }                    }
602    
603  %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies  %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
# Line 572  Line 608 
608  %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's  %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's
609  %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are  %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are
610  %%   also available.  %%   also available.
611      
612  @incollection{naum-etal:06,  @incollection{naum-etal:06,
613          Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},          Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},
614          Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},          Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},
# Line 582  Line 618 
618          Title = {Adjoint code by source transformation with OpenAD/F},          Title = {Adjoint code by source transformation with OpenAD/F},
619          Year = {2006}}          Year = {2006}}
620    
621    @Article{orl:76,
622     author         = {I. Orlanski},
623     year           = 1976,
624     title          = {A simple boundary condition for unbounded hyperbolic flows},
625     journal        = jcp,
626     volume         = {21},
627     pages          = {251--269},
628                    }
629    
630    @Article{pal-rom:97,
631     author         = {T. Paluszkiewicz and R.D. Romea},
632     year           = 1997,
633     title          = {A one-dimensional model for the parameterization
634                      of deep convection in the ocean},
635     journal        = dao,
636     volume         = {26},
637     pages          = {95--130},
638                      }
639    
640  @TechReport{rew:97,  @TechReport{rew:97,
641    author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},    author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
642    title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},    title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},
# Line 891  Line 946 
946    doi     =      {10.1175/MWR2823.1},    doi     =      {10.1175/MWR2823.1},
947  }  }
948    
949    @inproceedings{adcroft:04c,
950      author =       {Adcroft, A. and C. Hill and J.-M. Campin and J. Marshall
951                      and P. Heimbach},
952      title =        {Overview of the Formulation and Numerics of the {MIT}GCM},
953      booktitle =   {Proceedings of the ECMWF seminar series on Numerical Methods,
954                     Recent developments in numerical methods for atmosphere and
955                     ocean modelling},
956      year =         2004,
957      pages =        {139-149},
958      url   =        {http://mitgcm.org/pdfs/ECMWF2004-Adcroft.pdf},
959     publisher =     ecmwf
960    }
961    
962  @Article{marshall:04,  @Article{marshall:04,
963    author =       {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White},    author =       {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White},
964    title =        {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms},    title =        {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms},
# Line 1201  Line 1269 
1269  }  }
1270    
1271  @ARTICLE{zha98a,  @ARTICLE{zha98a,
1272    AUTHOR      = "J. Zhang and W. D. {Hibler, III} and M. Steele    AUTHOR      = "J. Zhang and Hibler, III, W. D. and M. Steele
1273                   and D. A. Rothrock",                   and D. A. Rothrock",
1274    TITLE       = "Arctic ice-ocean modeling with and without climate restoring",    TITLE       = "Arctic ice-ocean modeling with and without climate restoring",
1275    JOURNAL     = jpo,    JOURNAL     = jpo,
# Line 1230  Line 1298 
1298  }  }
1299    
1300  @ARTICLE{hib79,  @ARTICLE{hib79,
1301    AUTHOR      = "W. D. {Hibler, III}",    author =       {Hibler, III, W. D.},
1302    TITLE       = "A Dynamic Thermodynamic Sea Ice Model",    TITLE       = "A Dynamic Thermodynamic Sea Ice Model",
1303    JOURNAL     = jpo,    JOURNAL     = jpo,
1304    YEAR        = 1979,    YEAR        = 1979,
# Line 1239  Line 1307 
1307  }  }
1308    
1309  @ARTICLE{fla92,  @ARTICLE{fla92,
1310    AUTHOR      = "G. M. Flato and W. D. {Hibler, III}",    AUTHOR      = "G. M. Flato and Hibler, III, W. D.",
1311    TITLE       = "Modeling pack ice as a cavitating fluid",    TITLE       = "Modeling pack ice as a cavitating fluid",
1312    JOURNAL     = jpo,    JOURNAL     = jpo,
1313    YEAR        = 1992,    YEAR        = 1992,
# Line 1622  atmospheric boundary layer.}, Line 1690  atmospheric boundary layer.},
1690   volume         = {126},   volume         = {126},
1691   pages          = {991-1000}   pages          = {991-1000}
1692                    }                    }
1693    
1694  @TechReport{MPI-std-20,  @TechReport{MPI-std-20,
1695    author =       {{Message Passing Interface Forum}}},    author =       {{Message Passing Interface Forum}},
1696    title =        {{MPI}: A Message-Passing Interface standard (version 2.0)},    title =        {{MPI}: A Message-Passing Interface standard (version 2.0)},
1697    institution =  {mpi-forum.org},    institution =  {mpi-forum.org},
1698    year =         {1998},    year =         {1998},
1699  }  }
1700    
1701    @Article{cam08,
1702      author =       {Jean-Michel Campin and John Marshall and David
1703                      Ferreira},
1704      title =        {Sea-Ice Ocean Coupling Using a Rescaled Vertical
1705                      Coordinate z$^\ast$},
1706      journal =      om,
1707      volume =       24,
1708      number =       {1--2},
1709      pages =        {1--14},
1710      doi =          {10.1016/j.ocemod.2008.05.005},
1711      year =         2008
1712    }
1713    
1714    @Article{geiger98,
1715      author =       {Cathleen A. Geiger and Hibler, III, William D. and
1716                      Stephen F. Ackley},
1717      title =        {Large-Scale Sea Ice Drift and Deformation:
1718                      {C}omparison between Models and Observations in the
1719                      Western {W}eddell {S}ea during 1992},
1720      journal =      jgr,
1721      year =         1998,
1722      volume =       103,
1723      number =       {C10},
1724      pages =        {21893--21913}
1725    }
1726    
1727    @InCollection{hibler84,
1728      author =       {Hibler, III, William D.},
1729      title =        {The role of sea ice dynamics in modeling CO{$_2$}
1730                      increases},
1731      booktitle =    {Climate processes and climate sensitivity},
1732      pages =        {238--253},
1733      publisher =    {AGU},
1734      year =         1984,
1735      editor =       {J. E. Hansen and T. Takahashi},
1736      volume =       29,
1737      series =       {Geophysical Monograph},
1738      address =      {Washington, D.C.}
1739    }
1740    
1741    @Article{hibler87,
1742      author =       {Hibler, III, William D. and Kirk Bryan},
1743      title =        {A Diagnostic Ice-Ocean Model},
1744      journal =      jpo,
1745      year =         1987,
1746      volume =       17,
1747      number =       7,
1748      pages =        {987--1015}
1749    }
1750    
1751    @InCollection{hibler95,
1752      author =       {Hibler, III, William D. and Chi F. Ip},
1753      title =        {The effect of sea ice rheology on {A}rcitc buoy
1754                      drift},
1755      booktitle =    {Ice Mechanics},
1756      pages =        {255--264},
1757      publisher =    {Am. Soc. of Mech. Eng.},
1758      year =         1995,
1759      editor =       {John P. Dempsey and Y. D. S. Rajapakse},
1760      volume =       204,
1761      series =       {AMD},
1762      address =      {New York}
1763    }
1764    
1765    @Article{hibler97,
1766      author =       {Hibler, III, William D. and Erland M. Schulson},
1767      title =        {On Modeling Sea-Ice Fracture and Flow in Numerical
1768                      Investigations of Climate},
1769      journal =      angl,
1770      year =         1997,
1771      volume =       25,
1772      pages =        {26--32}
1773    }
1774    
1775    @Article{hundsdorfer94,
1776      author =       {Willem Hundsdorfer and R. A. Trompert},
1777      title =        {Method of Lines and Direct Discretization: a
1778                      Comparison for Linear Advection},
1779      journal =      {Applied Numerical Mathematics},
1780      year =         1994,
1781      volume =       13,
1782      number =       6,
1783      pages =        {469--490},
1784      doi =          {10.1016/0168-9274(94)90009-4}
1785    }
1786    
1787    @Article{leppaeranta83,
1788      author =       {Matti Lepp{\"a}ranta},
1789      title =        {A Growth Model for Black Ice, Snow Ican and Snow
1790                      Thickness in Subarctic Basins},
1791      journal =      {Nordic Hydrology},
1792      year =         1983,
1793      volume =       14,
1794      pages =        {59--70}
1795    }
1796    
1797    @Article{manabe79,
1798      author =       {S. Manabe and Kirk Bryan and M. J. Spelman},
1799      title =        {A Global Ocean-Atmosphere Climate Model with Seasonal
1800                      Variation for Future Studies of Climate Sensitivity},
1801      journal =      dao,
1802      year =         1979,
1803      volume =       3,
1804      number =       {393--426}
1805    }
1806    
1807    @ARTICLE{menemenlis05,
1808      author =       {D. Menemenlis and C. Hill and A. Adcroft and
1809                      J.-M. Campin and B. Cheng and B. Ciotti and
1810                      I. Fukumori and A. Koehl and P. Heimbach and
1811                      C. Henze and T. Lee and D. Stammer and J. Taft and
1812                      J. Zhang},
1813      title =        {{NASA} Supercomputer Improves Prospects for Ocean
1814                      Climate Research},
1815      journal =      eos,
1816      year =         2005,
1817      volume =       86,
1818      number =       9,
1819      pages =        {89, 95--96}
1820    }
1821    
1822    @Article{parkinson79,
1823      author =       {{Parkinson}, Claire~L. and {Washington}, Warren~M.},
1824      title =        "{A Large-Scale Numerical Model of Sea Ice}",
1825      journal =      jgr,
1826      year =         1979,
1827      month =        jan,
1828      volume =       84,
1829      number =       {C1},
1830      pages =        {311--337},
1831      adsurl =       {http://adsabs.harvard.edu/cgi-bin/nph-bib_query?bibcode=1979JGR....84..311P&db_key=PHY},
1832      adsnote =      {Provided by the Smithsonian/NASA Astrophysics Data
1833                      System}
1834    }
1835    
1836    @Article{semtner84,
1837      author =       {Semtner, Jr., Albert J.},
1838      title =        {On Modelling the Seasonal Thermodynamic Cycle of Sea
1839                      Ice in Studies of Climatic Change},
1840      journal =      cch,
1841      year =         1984,
1842      volume =       6,
1843      number =       1,
1844      pages =        {27--37}
1845    }
1846    
1847    @Article{zhang97,
1848      author =       {Jinlun Zhang and Hibler, III, William D.},
1849      title =        {On an Efficient Numerical Method for Modeling Sea Ice Dynamics},
1850      journal =      jgr,
1851      year =         1997,
1852      volume =       102,
1853      number =       {C4},
1854      pages =        {8691--8702}
1855    }
1856    
1857    @Article{zhang03,
1858      author =       {Jinlun Zhang and Drew A. Rothrock},
1859      title =        {Modeling Global Sea Ice with a Thickness and
1860                      Enthalpy Distribution Model in Generalized
1861                      Curvilinear Coordinates},
1862      journal =      mwr,
1863      year =         2003,
1864      volume =       131,
1865      number =       5,
1866      pages =        {845--861}
1867    }
1868    
1869    @Article{beckmann99,
1870      author =       {Aike Beckmann and Hartmut H. Hellmer and Ralph
1871                      Timmermann},
1872      title =        {A Numerical Model of the {W}eddell {S}ea:
1873                      Large-Scale Circulation and Water Mass Distribution},
1874      journal =      jgr,
1875      year =         1999,
1876      volume =       104,
1877      number =       {C10},
1878      pages =        {23,375--23,392}
1879    }
1880    
1881    @Article{grosfeld97,
1882      author =       {Klaus Grosfeld and R{\"u}diger Gerdes and J{\"u}rgen
1883                      Determann},
1884      title =        {Thermohaline Circulation and Interaction between Ice
1885                      Shelf Cavities and the Adjacent Open Water},
1886      journal =      jgr,
1887      year =         1997,
1888      volume =       102,
1889      number =       {C7},
1890      pages =        {15,595--15,610}
1891    }
1892    
1893    @Article{hellmer89,
1894      author =       {Hartmut H. Hellmer and Dirk J. Olbers},
1895      title =        {A Two-Dimensional Model of the Thermohaline
1896                      Circulation Under an Ice Shelf},
1897      journal =      {Antarct. Sci.},
1898      year =         1989,
1899      volume =       1,
1900      pages =        {325--336}
1901    }
1902    
1903    @Article{holland99,
1904      author =       {David M. Holland and Adrian Jenkins},
1905      title =        {Modeling Thermodynamic Ice-Ocean Interactions at the
1906                      Base of an Ice Shelf},
1907      journal =      jpo,
1908      year =         1999,
1909      volume =       29,
1910      number =       8,
1911      pages =        {1787--1800}
1912    }
1913    
1914    @Article{jenkins01,
1915      author =       {Adrian Jenkins and Hartmut H. Hellmer and David
1916                      M. Holland},
1917      title =        {The Role of Meltwater Advection in the Formulation
1918                      of Conservative Boundary Conditions at an Ice-Ocean
1919                      Interface},
1920      journal =      jpo,
1921      year =         2001,
1922      volume =       31,
1923      pages =        {285--296}}
1924    
1925    @Article{losch08,
1926      author =       {Martin Losch},
1927      title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean
1928                      General Circulation Model},
1929      journal =      jgr,
1930      year =         2008,
1931      volume =       113,
1932      number =       {C08043},
1933      doi =          {10.1029/2007JC004368}
1934    }
1935    
1936    @Article{Dutay02,
1937     author         = {Dutay, J.-C. and J.L. Bullister and S.C. Doney and J.C. Orr
1938        and R. Najjar and K. Caldeira and J.-M. Campin and H. Drange and M. Follows
1939        and Y. Gao and N. Gruber and M.W. Hecht and A. Ishida and F. Joos and K. Lindsay
1940        and G. Madec and E. Maier-Reimer and J.C. Marshall and R.J. Matear and P. Monfray
1941        and A. Mouchet and G.-K. Plattner and J. sarmiento and R. Schlitzer and R. Slater
1942        and I.J. Totterdell and M.-F. Weirig and Y. Yammanaka and A. Yool},
1943     year           = 2002,
1944     title          = {Evaluation of ocean model ventilation with CFC-11:
1945                       comparison of 13 global ocean models},
1946     journal        = om,
1947     volume         = {4},          number= {},             month   = {},
1948     pages          = {89-120}
1949                    }
1950    
1951    @Article{marsh06,
1952     author         = {Marshall, John and Emily Shuckburgh and Helen Jones and Chris Hill},
1953     year           = 2006,
1954     title          = {Estimates and Implications of Surface Eddy Diffusivity
1955                       in the Southern Ocean Derived from Tracer Transport},
1956     journal        = jpo,
1957     volume         = {36},          number= {},             month   = {},
1958     pages          = {1806-1821}
1959                    }
1960    
1961    @InProceedings{hoe-hill:99,
1962      author =       {Hoe, James C. and Chris Hill and Alistair Adcroft},
1963      title =        {A Personal Supercomputer for Climate Research},
1964      booktitle =    {In Proceedings of the ACM/IEEE Super-Computing Confrence},
1965      year =         1999,
1966      pages = {10.1109/SC.1999},
1967      publisher =    {IEEE},
1968    }
1969    
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