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revision 1.1 by heimbach, Thu Oct 4 19:27:24 2001 UTC revision 1.52 by mlosch, Thu Jan 22 09:11:03 2015 UTC
# Line 1  Line 1 
1    @string{angl    = {Ann.\ Glaciol.}}
2  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}
3  @string{bams    = {Bull.~Am.~Met.~Soc.}}  @string{bams    = {Bull.~Am.~Met.~Soc.}}
4  @string{blm     = {Bound.~Layer~Meteorol.}}  @string{blm     = {Bound.~Layer~Meteorol.}}
5  @string{jgr     = {J.~Geophys.~Res.}}  @string{climd   = {Clim.~Dynamics}}
6  @string{ijrs    = {Int.~J.~Remote Sensing}}  @string{cch     = {Clim.\ Change}}
7    @string{cup     = {Cambridge University Press}}
8    @string{dao     = {Dyn.~Atmos.~Oceans}}
9    @string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}}
10    @string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}}
11    @string{dsr     = {Deep Sea Res.}}
12    @string{ecmwf   = {ECMWF}}
13    @string{eos     = {Eos~Trans.\ AGU}}
14    @string{esa     = {European Space Agency (ESA)}}
15    @string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}}
16    @string{estec   = {European Space Research and Technology Centre (ESTEC)}}
17    @string{gaos    = {Global Atmos.~Ocean System}}
18    @string{grl     = {Geophys.~Res.~Lett.}}
19    @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}
20    @string{ifremer = {IFREMER/CERSAT}}
21    @string{igarss  = {IEEE Press, Piscataway, N.J., USA}}
22    @string{jam     = {J.~Appl.~Meteor.}}
23    @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}
24  @string{jas     = {J.~Atmos.~Sci.}}  @string{jas     = {J.~Atmos.~Sci.}}
 @string{jpo     = {J.~Phys.~Oceanogr.}}  
25  @string{jclim   = {J.~Clim.}}  @string{jclim   = {J.~Clim.}}
26  @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}  @string{jcp     = {J.~Comput.~Phys.}}
27  @string{jfm     = {J.~Fluid Mech.}}  @string{jfm     = {J.~Fluid Mech.}}
28  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}  @string{jgr     = {J.~Geophys.~Res.}}
29    @string{ijrs    = {Int.~J.~Remote Sensing}}
30  @string{jms     = {J.~Mar.~Sys.}}  @string{jms     = {J.~Mar.~Sys.}}
31  @string{gaos    = {Global Atmos.~Ocean System}}  @string{jpo     = {J.~Phys.~Oceanogr.}}
32  @string{grl     = {Geophys.~Res.~Lett.}}  @string{mpi     = {MPI f\"ur Meteorologie}}
 @string{dsr     = {Deep Sea Res.}}  
 @string{dao     = {Dyn.~Atmos.~Oceans}}  
33  @string{mwr     = {Mon.~Wea.~Rev.}}  @string{mwr     = {Mon.~Wea.~Rev.}}
34    @string{om      = {Ocean Modelling}}
35    @string{ptrsl   = {{Phil.~Trans.~R.~Soc.~Lond.}}}
36  @string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}}  @string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}}
37    @string{siscicom= {SIAM J.\ Sci.\ Comput.}}
38  @string{tel     = {Tellus}}  @string{tel     = {Tellus}}
 @string{cup     = {Cambridge University Press}}  
 @string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}}  
 @string{ifremer = {IFREMER/CERSAT}}  
 @string{igarss  = {IEEE Press, Piscataway, N.J., USA}}  
 @string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}}  
 @string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}}  
 @string{mpi     = {MPI f\"ur Meteorologie}}  
 @string{ecmwf   = {ECMWF}}  
 @string{estec   = {European Space Research and Technology Centre  
                         (ESTEC)}}  
 @string{esa     = {European Space Agency (ESA)}}  
39    
40  @Article{bis-eta:92,  @Article{bis-eta:92,
41   author         = {C.H. Bishof and G.F. Corliss and L. Green and   author         = {C.H. Bishof and G.F. Corliss and L. Green and
# Line 39  Line 47 
47   volume         = {3},   volume         = {3},
48   pages          = {625--638},   pages          = {625--638},
49                    }                    }
50    
51  @incollection{bis:94,  @incollection{bis:94,
52   author         = {C.H. Bishof},   author         = {C.H. Bishof},
53   year           = 1994,   year           = 1994,
# Line 52  Line 60 
60   publisher      = {Kluwer},   publisher      = {Kluwer},
61   address        = {Dordrecht, NL},   address        = {Dordrecht, NL},
62                    }                    }
63    
64  @techreport{bis-eta:94,  @techreport{bis-eta:94,
65   author         = {C. Bishof and A. Carle and P. Khademi and   author         = {C. Bishof and A. Carle and P. Khademi and
66                    A. Maurer},                    A. Maurer},
# Line 63  Line 71 
71                    Computer Science Division},                    Computer Science Division},
72   type           = {Argonne Preprint},   type           = {Argonne Preprint},
73   number         = {ANL-MCS-P981-1194},   number         = {ANL-MCS-P981-1194},
74   address        = {ANL; 9700 South Cass Ave.;   address        = {ANL; 9700 South Cass Ave.;
75                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
76   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
77                    }                    }
78    
79    @Article{bouillon13,
80      author =       {Sylvain Bouillon and Thierry Fichefet and Vincent
81                      Legat and Gurvan Madec},
82      title =        {The Elastic-Viscous-Plastic Method Revisited},
83      journal =      om,
84      volume =       71,
85      number =       0,
86      pages =        {2--12},
87      year =         2013,
88      note =         {Arctic Ocean},
89      issn =         {1463-5003},
90      doi =          {10.1016/j.ocemod.2013.05.013},
91      url =          {http://dx.doi.org/10.1016/j.ocemod.2013.05.013},
92    }
93    @ARTICLE{bryan:84,
94      author = {Kirk Bryan},
95      title = {Accelerating the convergence to equilibrium of Ocean-Climate Models},
96      journal = jpo,
97      year = {1984},
98      volume = {14},
99      number = {4},
100      pages = {666-673},
101    }
102    
103    @ARTICLE{bugi-hill:06,
104      author = {V. Bugnion and C. Hill},
105      title = {Equilibration mechanisms in an adjoint ocean general
106               circulation model},
107      journal = {Ocean Dynamics},
108      year = {2006},
109      volume = {56},
110      number = {1},
111      pages = {51-61},
112      doi   = {10.1007/s10236-005-0052-z},
113    }
114    
115  @techreport{bis-roh:97,  @techreport{bis-roh:97,
116   author         = {C. Bishof and L. Roh},   author         = {C. Bishof and L. Roh},
117   year           = 1997,   year           = 1997,
# Line 77  Line 121 
121                    Computer Science Division},                    Computer Science Division},
122   type           = {Argonne Preprint},   type           = {Argonne Preprint},
123   number         = {ANL-MCS-P626-1196},   number         = {ANL-MCS-P626-1196},
124   address        = {ANL; 9700 South Cass Ave.;   address        = {ANL; 9700 South Cass Ave.;
125                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
126   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
127                    }                    }
128    
129    @Article{castro-morales14,
130      author =       {Karel Castro-Morales and Frank Kauker and Martin
131                      Losch and Stefan Hendricks and Kathrin Riemann-Campe
132                      and R{\"u}diger Gerdes},
133      title =        {Sensitivity of Simulated {A}rctic Sea Ice to
134                      Realistic Ice Thickness Distributions and Snow
135                      Parameterizations},
136      journal =      jgr,
137      issn =         {2169-9291},
138      year =         2014,
139      volume =       119,
140      number =       1,
141      pages =        {559--571},
142      url =          {http://dx.doi.org/10.1002/2013JC009342},
143      doi =          {10.1002/2013JC009342},
144    }
145    
146  @Article{cou-tal:87,  @Article{cou-tal:87,
147   author         = {P. Courtier and O. Talagrand},   author         = {P. Courtier and O. Talagrand},
148   year           = 1987,   year           = 1987,
149   title          = {Variational assimilation of meteorological   title          = {Variational assimilation of meteorological
150                    observations with the adjoint vorticity equation.                    observations with the adjoint vorticity equation.
151                    II: Numerical results},                    II: Numerical results},
152   journal        = qjrms,   journal        = qjrms,
153   volume         = {113},   volume         = {113},
154   pages          = {1329--1347},   pages          = {1329--1347},
155                    }                    }
156    
157  @Article{cou-tal:90,  @Article{cou-tal:90,
158   author         = {P. Courtier and O. Talagrand},   author         = {P. Courtier and O. Talagrand},
159   year           = 1990,   year           = 1990,
# Line 103  Line 164 
164   volume         = {42A},   volume         = {42A},
165   pages          = {531--549},   pages          = {531--549},
166                    }                    }
167    
168  @Article{cou-eta:94,  @Article{cou-eta:94,
169   author         = {P. Courtier and J.-N. Th{\'e}paut and   author         = {P. Courtier and J.-N. Th{\'e}paut and
170                    A. Hollingsworth},                    A. Hollingsworth},
# Line 114  Line 175 
175   volume         = {120},   volume         = {120},
176   pages          = {1367--1387},   pages          = {1367--1387},
177                    }                    }
178    
179    @ARTICLE{durr:91,
180      author = {Dale R. Durran},
181      title = {The Third-Order Adams-Bashforth Method: An Attractive Alternative
182               to Leapfrog Time Differencing},
183      journal = mwr,
184      year = {1991},
185      volume = {119},
186      pages  = {702-720},
187    }
188    
189    
190    @ARTICLE{dutk-etal:06,
191      author = {S. Dutkiewicz and M.J. Follows and P. Heimbach and J. Marshall},
192      title = {Controls on ocean productivity and air-sea carbon flux:
193               An adjoint model sensitivity study},
194      journal = grl,
195      year = {2006},
196      volume = {33},
197      pages  = {L02603},
198      doi    = {10.1029/2005GL024987},
199    }
200    
201  @Article{err:97,  @Article{err:97,
202   author         = {R.M. Errico},   author         = {R.M. Errico},
203   year           = 1997,   year           = 1997,
# Line 123  Line 206 
206   volume         = {78},   volume         = {78},
207   pages          = {2577--2591},   pages          = {2577--2591},
208                    }                    }
209    
210  @Article{far-moo:92,  @Article{far-moo:92,
211   author         = {B.F. Farrell and A.M. Moore},   author         = {B.F. Farrell and A.M. Moore},
212   year           = {1992},   year           = {1992},
# Line 133  Line 216 
216   volume         = {22},   volume         = {22},
217   pages          = {338--349},   pages          = {338--349},
218                    }                    }
219    
220  @Article{far-ioa:96a,  @Article{far-ioa:96a,
221   author         = {B.F. Farrell and P. Ioannou},   author         = {B.F. Farrell and P. Ioannou},
222   year           = {1996a},   year           = {1996a},
# Line 143  Line 226 
226   volume         = {53},   volume         = {53},
227   pages          = {2025--2040},   pages          = {2025--2040},
228                    }                    }
229    
230  @Article{far-ioa:96b,  @Article{far-ioa:96b,
231   author         = {B.F. Farrell and P. Ioannou},   author         = {B.F. Farrell and P. Ioannou},
232   year           = {1996b},   year           = {1996b},
# Line 153  Line 236 
236   volume         = {53},   volume         = {53},
237   pages          = {2041--2053},   pages          = {2041--2053},
238                    }                    }
239    
240  @techreport{fau-pap:98,  @techreport{fau-pap:98,
241   author         = {C. Faure and Y. Papegay},   author         = {C. Faure and Y. Papegay},
242   year           = 1998,   year           = 1998,
# Line 166  Line 249 
249                    06902 Sophia Antipolis Cedex; France},                    06902 Sophia Antipolis Cedex; France},
250   note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},   note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},
251                    }                    }
252    
253  @Article{fau:00,  @Article{fau:00,
254   author         = {C. Faure},   author         = {C. Faure},
255   year           = {2000},   year           = {2000},
# Line 174  Line 257 
257   journal        = {Optimisation Methods and Software},   journal        = {Optimisation Methods and Software},
258   note           = {in press},   note           = {in press},
259                    }                    }
260    
261    @Article{fer-eta:05,
262     author         = {D. Ferreira and J. Marshall and P. Heimbach},
263     year           = 2005,
264     title          = {Estimating Eddy Stresses by Fitting Dynamics to Observations
265                       using a Residual-Mean Ocean Circulation Model and Its Adjoint},
266     journal        = jpo,
267     volume         = {35},
268     pages          = {1891--1910},
269                      }
270    
271    @Article{gas-eta:90,
272     author         = {P. Gaspar and Y. Gr\'egoris and J.-M. Lefevre},
273     year           = 1990,
274     title          = {A Simple Eddy Kinetic Energy Model for Simulations of the
275                       Oceanic Vertical Mixing: Tests at Station Papa and Long-Term
276                       Upper Ocean Study Site},
277     journal        = jgr,
278     volume         = {95 (C9)},
279     pages          = {16,179--16,193},
280                      }
281    
282  @Article{gen-mcw:90,  @Article{gen-mcw:90,
283   author         = {P.R. Gent and J.C. McWilliams},   author         = {P. R. Gent and J. C. McWilliams},
284   year           = 1990,   year           = 1990,
285   title          = {Isopycnal mixing in ocean circulation models},   title          = {Isopycnal mixing in ocean circulation models},
286   journal        = jpo,   journal        = jpo,
287   volume         = {20},   volume         = {20},
288   pages          = {150--155},   pages          = {150--155},
289                    }                    }
290    
291  @Article{gen-eta:95,  @Article{gen-eta:95,
292   author         = {P.R. Gent and J. Willebrand and T.J. McDougall   author         = {P. R. Gent and J. Willebrand and T. J. McDougall and J. C. McWilliams},
                   and J.C. McWilliams},  
293   year           = 1995,   year           = 1995,
294   title          = {Parameterizing eddy-induced tracer transports in   title          = {Parameterizing eddy-induced tracer transports in ocean circulation models},
                   ocean circulation models},  
295   journal        = jpo,   journal        = jpo,
296   volume         = {25},   volume         = {25},
297   pages          = {463--474},   pages          = {463--474},
298                    }                    }
299    
300  @Article{gie-kam:98,  @Article{gie-kam:98,
301   author         = {R. Giering and T. Kaminski},   author         = {R. Giering and T. Kaminski},
302   year           = 1998,   year           = 1998,
# Line 207  Line 309 
309  @techreport{gie:99,  @techreport{gie:99,
310   author         = {R. Giering},   author         = {R. Giering},
311   year           = 1999,   year           = 1999,
312   title          = {Tangent linear and Adjoint Model Compiler.   title          = {Tangent linear and Adjoint Model Compiler.
313                    Users manual 1.4 (TAMC Version 5.2)},                    Users manual 1.4 (TAMC Version 5.2)},
314   institution    = {Massachusetts Institute of Technology},   institution    = {Massachusetts Institute of Technology},
315   type           = {Report},   type           = {Report},
# Line 216  Line 318 
318                    02139; USA},                    02139; USA},
319   note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},   note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},
320                    }                    }
321    
322  @incollection{gie:00,  @incollection{gie:00,
323   author         = {R. Giering},   author         = {R. Giering},
324   editor         = {P. Kasibhatla and M. Heimann and P. Rayner and   editor         = {P. Kasibhatla and M. Heimann and P. Rayner and
# Line 240  Line 342 
342   volume         = {45},   volume         = {45},
343   pages          = {407--435},   pages          = {407--435},
344                    }                    }
345    
346  @book{gil-eta:81,  @book{gil-eta:81,
347   author         = {P.E. Gill and W. Murray and M.H. Wright},   author         = {P.E. Gill and W. Murray and M.H. Wright},
348   title          = {Practical optimization},   title          = {Practical optimization},
349   year           = 1981,   year           = 1981,
350   publisher      = {Academic Press},   publisher      = {Academic Press},
351   address        = {London},   address        = {London},
352   pages          = {401 pp.},   pages          = {401 pp.},
353                    }                    }
354                                                                      
355    @incollection{gri:89,
356     author         = {A. Griewank},
357     year           = 1989,
358     title          = {On automatic differentiation},
359     booktitle      = {Mathematical Programming: Recent Developments and
360                      Applications},
361     pages          = {83--108},
362     editor         = {M. Iri and K. Tanabe},
363     publisher      = {Kluwer},
364     address        = {Dordrecht, NL},
365                      }
366    
367    @Article{gri:92,
368      author =       {A.~Griewank},
369      title =        {Achieving logarithmic growth of temporal and spatial
370      complexity in reverse {A}utomatic {D}ifferentiation},
371      journal       = {Optimization Methods and Software},
372      year          = {1992},
373      volume        = {1},
374      pages         = {35--54}
375    }
376    
377  @book{gri:00,  @book{gri:00,
378   author         = {A. Griewank},   author         = {A. Griewank},
379   title          = {Evaluating Derivatives. Principles and Techniques   title          = {Evaluating Derivatives. Principles and Techniques
# Line 258  Line 382 
382   series         = {Frontiers in Applied Mathematics},   series         = {Frontiers in Applied Mathematics},
383   volume         = {19},   volume         = {19},
384   publisher      = {SIAM},   publisher      = {SIAM},
385   address        = {Philadelphia},   address        = {Philadelphia},
386   pages          = {369 pp.},   pages          = {369 pp.},
387                    }                    }
388                                                                      
389  @Article{hal-eta:82,  @Article{hal-eta:82,
390   author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},   author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},
391   year           = 1982,   year           = 1982,
# Line 271  Line 395 
395   volume         = {39},   volume         = {39},
396   pages          = {2038--3050},   pages          = {2038--3050},
397                    }                    }
398    
399    @Article{Haney,
400      author =       {R.L. Haney},
401      title =        {Surface thermal boundary conditions for ocean
402                      circulation models},
403      journal =      jpo,
404      year =         1971,
405      volume =       1,
406      pages =        {241--248}
407    }
408    
409    @Article{held-suar:94,
410     author         = {I.M. Held and M.J. Suarez},
411     year           = {1994},
412     title          = {A proposal for the intercomparison of the dynamical cores of atmospheric general circulation models},
413     journal        = {Bulletin of the American Meteorological Society},
414     volume         = {75(10)},
415     pages          = {1825-1830}
416    }
417    
418  @Article{hil-eta:01,  @Article{hil-eta:01,
419   author         = {C. Hill and M. Follows and V. Bugnion and   author         = {C. Hill and M. Follows and V. Bugnion and
420                    J. Marshall},                    J. Marshall},
421   year           = {2001},   year           = {2002},
422   title          = {Spatial and Temporal Impacts of ocean general   title          = {Spatial and Temporal Impacts of ocean general
423                    circulation on carbon sequestration},                    circulation on carbon sequestration},
424   journal        = {journal ???},   journal        = {Global Biogeochemical Cycles},
425   note           = {submitted},   note           = {submitted},
426                    }                    }
427    
428    @ARTICLE{hib80,
429      author =       {Hibler, III, William D.},
430      TITLE       = "Modeling a Variable Thickness Sea Ice Cover",
431      JOURNAL     = mwr,
432      YEAR        = 1980,
433      VOLUME      = 1,
434      PAGES       = "1943-1973"
435    }
436    
437    @Article{Holland75,
438     author         = {W.R. Holland and L. B. Lin},
439     year           = {1975a},
440     title          = {On the origin of mesoscale eddies and their contribution
441                       to the general circulation of the ocean. I. A preliminary
442                       numerical experiment},
443     journal        = jpo,
444     volume         = {5},
445     pages          = {642-657}
446                      }
447    
448    @Article{hol-lin:75b,
449     author         = {W.R. Holland and L. B. Lin},
450     year           = {1975b},
451     title          = {On the origin of mesoscale eddies and their contribution
452                       to the general circulation of the ocean. II. A parameter
453                       study},
454     journal        = jpo,
455     volume         = {5},
456     pages          = {658-669}
457                      }
458    
459    @Article{jam-oze:86,
460     author         = {B.M. Jamart and J. Ozer},
461     year           = {1986},
462     title          = {Numerical boundary layers and spurious residual flows},
463     journal        = jgr,
464     volume         = {91},
465     pages          = {10,621-10,631}
466                      }
467    
468  @book{kas-eta:00,  @book{kas-eta:00,
469   author         = {P. Kasibhatla and M. Heimann and P. Rayner and   author         = {P. Kasibhatla and M. Heimann and P. Rayner and
470                    N. Mahowald and R.G. Prinn and D.E. Hartley},                    N. Mahowald and R.G. Prinn and D.E. Hartley},
# Line 297  Line 480 
480  @Article{lar-eta:94,  @Article{lar-eta:94,
481   author         = {W.G. Large and J.C. McWilliams and S.C. Doney},   author         = {W.G. Large and J.C. McWilliams and S.C. Doney},
482   year           = 1994,   year           = 1994,
483   title          = {Oceanic vertical mixing: A review and a model   title          = {Oceanic vertical mixing: A review and a model with nonlocal boundary layer parameterization},
                   with nonlocal boundary layer parameterization},  
484   journal        = {Rev.~Geophys.},   journal        = {Rev.~Geophys.},
485   volume         = {32},   volume         = {32},
486   pages          = {363--403},   pages          = {363--403},
487                    }                    }
488    
489  @Article{lar-eta:97,  @Article{lar-eta:97,
490   author         = {W.G. Large and G. Danabasoglu and S.C. Doney   author         = {W. G. Large and G. Danabasoglu and S. C. Doney
491                    and J.C. McWilliams},                    and J. C. McWilliams},
492   year           = 1997,   year           = 1997,
493   title          = {Sensitivity to surface forcing and boundary layer   title          = {Sensitivity to surface forcing and boundary layer
494                    mixing in a global ocean model: annual-mean                    mixing in a global ocean model: Annual-mean climatology},
                   climatology},  
495   journal        = jpo,   journal        = jpo,
496   volume         = {27},   volume         = {27},
497     number         = 11,
498   pages          = {2418--2447},   pages          = {2418--2447},
499                    }                    }
500    
501  @Article{led-tal:86,  @Article{led-tal:86,
502   author         = {F.-X. {Le Dimet} and O. Talagrand},   author         = {F.-X. {Le Dimet} and O. Talagrand},
503   year           = 1986,   year           = 1986,
# Line 326  Line 508 
508   volume         = {38A},   volume         = {38A},
509   pages          = {97--110},   pages          = {97--110},
510                    }                    }
511    
512    @TechReport{lev:94a,
513      author =       {S. Levitus and T.P.Boyer},
514      title =        {{World Ocean Atlas 1994 Volume 3: Salinity}},
515      institution =  {NOAA Atlas NESDIS 3},
516      year =         1994,
517      OPTkey =       {},
518      OPTtype =      {},
519      OPTnumber =    {},
520      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
521      OPTmonth =     {},
522      OPTnote =      {},
523      OPTannote =    {}
524    }
525    
526    
527    @TechReport{Levitus94,
528      author =       {S. Levitus and T.P.Boyer},
529      title =        {{World Ocean Atlas 1994 Volume 4: Temperature}},
530      institution =  {NOAA Atlas NESDIS 4},
531      year =         1994,
532      OPTkey =       {},
533      OPTtype =      {},
534      OPTnumber =    {},
535      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
536      OPTmonth =     {},
537      OPTnote =      {},
538      OPTannote =    {}
539    }
540    
541    
542  @Article{lew-der:85,  @Article{lew-der:85,
543   author         = {J. Lewis and J. Derber},   author         = {J. Lewis and J. Derber},
544   year           = {1985},   year           = {1985},
# Line 336  Line 548 
548   volume         = {37A},   volume         = {37A},
549   pages          = {309--322},   pages          = {309--322},
550                    }                    }
551    
552  @techreport{lon:88,  @techreport{lon:88,
553   author         = {R.B. Long},   author         = {R.B. Long},
554   year           = 1988,   year           = 1988,
# Line 348  Line 560 
560   pages          = {38 pp.},   pages          = {38 pp.},
561   address        = {Delft (NL)},   address        = {Delft (NL)},
562                    }                    }
563    
564    @ARTICLE{losc-heim:06,
565      author =       {Martin Losch and Patrick Heimbach},
566      title =        {Adjoint Sensitivity of an Ocean General Circulation
567                      Model to Bottom Topography},
568      journal =      jpo,
569      year =         2007,
570      volume =       37,
571      doi =          {10.1175/JPO3017.1},
572      number =       2,
573      pages =        {377--393},
574      url    = {http://mitgcm.org/pdfs/Los2006a.pdf},
575    }
576    
577    
578  @Article{maro-wun:93,  @Article{maro-wun:93,
579   author         = {J. Marotzke and C. Wunsch},   author         = {J. Marotzke and C. Wunsch},
580   year           = 1993,   year           = 1993,
# Line 359  Line 585 
585   volume         = {98, C11},   volume         = {98, C11},
586   pages          = {20,149--20,167},   pages          = {20,149--20,167},
587                    }                    }
588    
589  @Article{maro-eta:99,  @Article{maro-eta:99,
590   author         = {J. Marotzke and R. Giering and K.Q. Zhang and   author         = {J. Marotzke and R. Giering and K.Q. Zhang and
591                    D. Stammer and C. Hill and T. Lee},                    D. Stammer and C. Hill and T. Lee},
592   year           = 1999,   year           = 1999,
593   title          = {Construction of the adjoint MIT ocean general   title          = {Construction of the adjoint MIT ocean general
# Line 371  Line 597 
597   volume         = {104, C12},   volume         = {104, C12},
598   pages          = {29,529--29,547},   pages          = {29,529--29,547},
599                    }                    }
600    
601  @Article{mars-eta:97a,  @Article{mars-eta:97a,
602   author         = {J. Marshall and C. Hill and L. Perelman and   author         = {J. Marshall and C. Hill and L. Perelman and
603                    A. Adcroft},                    A. Adcroft},
# Line 382  Line 608 
608   volume         = {102, C3},   volume         = {102, C3},
609   pages          = {5,733--5,752},   pages          = {5,733--5,752},
610                    }                    }
611    
612  @Article{mars-eta:97b,  @Article{mars-eta:97b,
613   author         = {J. Marshall and A. Adcroft and C. Hill and   author         = {J. Marshall and A. Adcroft and C. Hill and
614                    L. Perelman and C. Heisey},                    L. Perelman and C. Heisey},
615   year           = {1997b},   year           = {1997b},
616   title          = {Hydrostatic, quasi-hydrostatic and   title          = {Hydrostatic, quasi-hydrostatic and
# Line 393  Line 619 
619   volume         = {102, C3},   volume         = {102, C3},
620   pages          = {5,753--5,766},   pages          = {5,753--5,766},
621                    }                    }
622    
623  @Article{mars-sha:98,  @Article{mars-eta:98,
624   author         = {J. Marshall and H. Jones and C. Hill},   author         = {J. Marshall and H. Jones and C. Hill},
625   year           = 1998,   year           = 1998,
626   title          = {Efficient ocean modeling using   title          = {Efficient ocean modeling using
# Line 402  Line 628 
628   journal        = jms,   journal        = jms,
629   volume         = {18},   volume         = {18},
630   pages          = {115--134},   pages          = {115--134},
631     url            = {http://mitgcm.org/pdfs/journal_of_marine_systems_1998.pdf},
632     doi            = {10.1016/S0924-7963\%2898\%2900008-6},
633                    }                    }
634    
635  @Article{mcw:96,  @Article{mol:09,
636   author         = {J. McWilliams},   author         = {Andrea Molod},
637   year           = 1996,   year           = 2009,
638   title          = {Modeling the oceanic general circulation},   title          = {Running {GCM} physics and dynamics on different grids:
639   journal        = arfm,                     algorithm and tests},
640   volume         = {28},   journal        = tel,
641   pages          = {215--248},   volume         = {61A},
642     pages          = {381--393},
643                    }                    }
644    
645    %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
646    %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.
647    %% (Available from Unidata or in PostScript form by anonymous FTP from
648    %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also
649    %%   a hypertext version of the User's Guide available at
650    %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's
651    %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are
652    %%   also available.
653    
654    @incollection{naum-etal:06,
655            Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},
656            Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},
657            Editor = {{P. Wesseling, E. O~nate and J. Periaux}},
658            Pages = {~},
659            Publisher = {TU Delft},
660            Title = {Adjoint code by source transformation with OpenAD/F},
661            Year = {2006}}
662    
663    @Article{orl:76,
664     author         = {I. Orlanski},
665     year           = 1976,
666     title          = {A simple boundary condition for unbounded hyperbolic flows},
667     journal        = jcp,
668     volume         = {21},
669     pages          = {251--269},
670                    }
671    
672    @Article{pal-rom:97,
673     author         = {T. Paluszkiewicz and R.D. Romea},
674     year           = 1997,
675     title          = {A one-dimensional model for the parameterization
676                      of deep convection in the ocean},
677     journal        = dao,
678     volume         = {26},
679     pages          = {95--130},
680                      }
681    
682    @TechReport{rew:97,
683      author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
684      title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},
685                      An Interface for Data Access, Version 3},
686      institution =  {Unidata Program Center},
687      type =         {Report},
688      address =      {Boulder, Colorado},
689      year =         1997,
690      note =         {http://www.unidata.ucar.edu/packages/netcdf/},
691    }
692    
693    
694  @Article{res-eta:98,  @Article{res-eta:98,
695   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},
696   year           = 1998,   year           = 1998,
697   title          = {Circumvening storage limitations in variational   title          = {Circumventing storage limitations in variational
698                    data assimilation studies},                    data assimilation studies},
699   journal        = {SIAM J. Sci. Comput.},   journal        = {SIAM J. Sci. Comput.},
700   volume         = {19},   volume         = {19},
701   pages          = {1586--1605},   pages          = {1586--1605},
702                    }                    }
703    
704  @Article{ros-eta:93,  @Article{ros-eta:93,
705   author         = {N. Rostaing and S. Dalmas and A. Galligo},   author         = {N. Rostaing and S. Dalmas and A. Galligo},
706   year           = 1993,   year           = 1993,
# Line 431  Line 709 
709   volume         = {45A},   volume         = {45A},
710   pages          = {558--568},   pages          = {558--568},
711                    }                    }
712    
713  @incollection{she-and:89,  @incollection{she-and:89,
714   author         = {J. Sheinbaum and D.L.T. Anderson},   author         = {J. Sheinbaum and D.L.T. Anderson},
715   year           = 1989,   year           = 1989,
716   title          = {Assimilation of XBT data using a variational   title          = {Assimilation of XBT data using a variational
717                    technique},                    technique},
718   booktitle      = {Oceanic circulation models:   booktitle      = {Oceanic circulation models:
719                    Combining data and dynamics},                    Combining data and dynamics},
# Line 446  Line 724 
724   publisher      = {Springer-Verlag},   publisher      = {Springer-Verlag},
725   address        = {Berlin (Germany)},   address        = {Berlin (Germany)},
726                    }                    }
727    
728  @techreport{sta-eta:97,  @article{utke-etal:08,
729      Author =       {J. Utke and U. Naumann and M. Fagan and N. Tallent
730                      and M. Strout and P. Heimbach and C. Hill and
731                      D. Ozyurt and C. Wunsch},
732      Date-Modified ={2007-11-19 10:15:08 -0500},
733      Journal =      {{ACM} Transactions on Mathematical Software},
734      Pages =        {~},
735      Title =        {OpenAD/F: A modular open source tool for automatic
736                      differentiation of Fortran codes},
737      Volume =       {34(4)},
738      Year =         2008
739    }
740    
741    @Article{DaSilva94,
742     author         = {A. da Silva and A. C. Young and S. Levitus},
743     year           = 1994,
744     title          = {Atlas of Surface Marine Data 1994, Volume 1: Algorithms and Procedures},
745     journal        = {NOAA Atlas NESDIS},
746     volume         = {6},
747     publisher      = {U.S. Department of Commerce},
748     address        = {Washington, D.C. (USA)},
749     note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
750     url            = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
751                      }
752    
753    @techreport{stam-etal:97,
754   author         = {D. Stammer and C. Wunsch and R. Giering and   author         = {D. Stammer and C. Wunsch and R. Giering and
755                    Q. Zhang and J. Marotzke an J. Marshall and                    Q. Zhang and J. Marotzke and J. Marshall and
756                    C. Hill},                    C. Hill},
757   year           = 1997,   year           = 1997,
758   title          = {The global ocean circulation estimated from   title          = {The global ocean circulation estimated from
759                    TOPEX/POSEIDON altimetry and a general circulation                    TOPEX/POSEIDON altimetry and a general circulation
760                    model},                    model},
761   institution    = {Center for Global Change Science, Massachusetts   institution    = {Center for Global Change Science, Massachusetts
# Line 462  Line 765 
765   pages          = {40 pp.},   pages          = {40 pp.},
766   address        = {Cambridge (MA), USA},   address        = {Cambridge (MA), USA},
767                    }                    }
768    
769  @Article{sta-eta:01,  @article{stam-etal:02,
770   author         = {D. Stammer and C. Wunsch and R. Giering and    author =       {D. Stammer and C. Wunsch and R. Giering and
771                    C. Eckert and P. Heimbach and J. Marotzke and                    C. Eckert and P. Heimbach and J. Marotzke and
772                    A. Adcroft and C. Hill and J. Marshall},                    A. Adcroft and C.N. Hill and J. Marshall},
773   year           = 2001,    title =        {The global ocean circulation and transports during
774   title          = {The global ocean circulation during 1992 -- 1997,                    1992 -- 1997, estimated from ocean observations and
775                    estimated from ocean observations and a general                    a general circulation model.},
776                    circulation model},    journal =      jgr,
777   journal        = jgr,    year =         {2002a},
778   note           = {submitted},    volume =       {107(C9)},
779      pages =        {3118},
780      doi =          {10.1029/2001JC000888},
781    }
782    
783    
784    @Article{Stommel66,
785     author         = {H. Stommel},
786     year           = 1948,
787     title          = {The western intensification of wind-driven ocean currents},
788     journal        = {Trans. Am. Geophys. Union},
789     volume         = {29},
790     pages          = {206},
791                    }                    }
792    
793  @Article{tal-cou:87,  @Article{tal-cou:87,
794   author         = {O. Talagrand and P. Courtier},   author         = {O. Talagrand and P. Courtier},
795   year           = 1987,   year           = 1987,
796   title          = {Variational assimilation of meteorological   title          = {Variational assimilation of meteorological
797                    observations with the adjoint vorticity equation.                    observations with the adjoint vorticity equation.
798                    I: Theory},                    I: Theory},
799   journal        = qjrms,   journal        = qjrms,
800   volume         = {113},   volume         = {113},
801   pages          = {1311--1328},   pages          = {1311--1328},
802                    }                    }
803    
804  @Article{tal:97,  @Article{tal:97,
805   author         = {O. Talagrand},   author         = {O. Talagrand},
806   year           = 1997,   year           = 1997,
# Line 494  Line 809 
809   volume         = {75},   volume         = {75},
810   pages          = {191--209},   pages          = {191--209},
811                    }                    }
812    
813  @book{tar:87,  @book{tar:87,
814   author         = {A. Tarantola},   author         = {A. Tarantola},
815   title          = {Inverse Problem Theory: Methods for data fitting   title          = {Inverse Problem Theory: Methods for data fitting
816                    and model parameter estimation},                    and model parameter estimation},
817   year           = 1987,   year           = 1987,
818   publisher      = {Elsevier},   publisher      = {Elsevier},
819   address        = {Amsterdam},   address        = {Amsterdam},
820   pages          = {629 pp.},   pages          = {629 pp.},
821                    }                    }
822                                                                      
823  @techreport{tha:87,  @techreport{tha:87,
824   author         = {W.C. Thacker},   author         = {W.C. Thacker},
825   year           = 1987,   year           = 1987,
# Line 516  Line 831 
831   pages          = {64 pp.},   pages          = {64 pp.},
832   address        = {Geesthacht (D)},   address        = {Geesthacht (D)},
833                    }                    }
834    
835  @Article{tha-lon:88,  @Article{tha-lon:88,
836   author         = {W.C. Thacker and R.B. Long},   author         = {W.C. Thacker and R.B. Long},
837   year           = 1988,   year           = 1988,
# Line 525  Line 840 
840   volume         = {93, C2},   volume         = {93, C2},
841   pages          = {1,227--1,240},   pages          = {1,227--1,240},
842                    }                    }
843    
844  @Article{tha:88,  @Article{tha:88,
845   author         = {W.C. Thacker},   author         = {W.C. Thacker},
846   year           = 1988,   year           = 1988,
# Line 535  Line 850 
850   volume         = {93},   volume         = {93},
851   pages          = {10,655--10,665},   pages          = {10,655--10,665},
852                    }                    }
853    
854  @Article{tha:89,  @Article{tha:89,
855   author         = {W.C. Thacker},   author         = {W.C. Thacker},
856   year           = 1989,   year           = 1989,
# Line 545  Line 860 
860   volume         = {94, C5},   volume         = {94, C5},
861   pages          = {6,177--6,196},   pages          = {6,177--6,196},
862                    }                    }
863    
864  @Article{tha-rag:94,  @Article{tha-rag:94,
865   author         = {W.C. Thacker and R. Raghunath},   author         = {W.C. Thacker and R. Raghunath},
866   year           = 1994,   year           = 1994,
# Line 555  Line 870 
870   volume         = {99, C5},   volume         = {99, C5},
871   pages          = {10,131--10,141},   pages          = {10,131--10,141},
872                    }                    }
873    
874  @Article{tzi-tha:89,  @Article{tzi-tha:89,
875   author         = {E. Tziperman and W.C. Thacker},   author         = {E. Tziperman and W.C. Thacker},
876   year           = {1989},   year           = {1989},
# Line 565  Line 880 
880   volume         = {19},   volume         = {19},
881   pages          = {1471--1485},   pages          = {1471--1485},
882                    }                    }
883    
884  @Article{tzi-eta:92a,  @Article{tzi-eta:92a,
885   author         = {E. Tziperman and W.C. Thacker and R.B. Long and   author         = {E. Tziperman and W.C. Thacker and R.B. Long and
886                    S. Hwang},                    S. Hwang},
# Line 576  Line 891 
891   volume         = {22},   volume         = {22},
892   pages          = {1434--1457},   pages          = {1434--1457},
893                    }                    }
894    
895  @Article{tzi-eta:92b,  @Article{tzi-eta:92b,
896   author         = {E. Tziperman and W.C. Thacker and R.B. Long and   author         = {E. Tziperman and W.C. Thacker and R.B. Long and
897                    S. Hwang and S.R. Rintoul},                    S. Hwang and S.R. Rintoul},
# Line 587  Line 902 
902   volume         = {22},   volume         = {22},
903   pages          = {1458--1485},   pages          = {1458--1485},
904                    }                    }
905    
906  @book{wun:96,  @book{wun:96,
907   author         = {C. Wunsch},   author         = {C. Wunsch},
908   title          = {The ocean circulation inverse problem},   title          = {The ocean circulation inverse problem},
909   year           = 1996,   year           = 1996,
910   publisher      = cup,   publisher      = cup,
911   address        = {Cambridge (UK)},   address        = {Cambridge (UK)},
912   pages          = {442 pp.},   pages          = {442 pp.},
913                    }                    }
914                                                                      
915  @Article{zha-mar:99,  @Article{zha-mar:99,
916   author         = {K.Q. Zhang and J. Marotzke},   author         = {K.Q. Zhang and J. Marotzke},
917   year           = 1999,   year           = 1999,
# Line 606  Line 921 
921   volume         = {57},   volume         = {57},
922   pages          = {305--334},   pages          = {305--334},
923                    }                    }
924    
925    
926    @InCollection{hill:95,
927      author =       {Hill, C. and J. Marshall},
928      title =        {Application of a Parallel Navier-Stokes Model to
929                      Ocean Circulation in Parallel Computational Fluid
930                      Dynamics},
931      booktitle =    {Implementations and Results Using Parallel
932                      Computers},
933      pages =        {545-552},
934      publisher =    {Elsevier Science B.V.: New York},
935      year =         1995,
936      editor =       {A. Ecer, J. Periaux, N. Satofuka and S. Taylor}
937    }
938    
939    
940    @Article{marshall:97a,
941      author =       {Marshall, J. and C. Hill and L. Perelman and A. Adcroft},
942      title =        {Hydrostatic, quasi-hydrostatic, and nonhydrostatic ocean
943                     modeling},
944      journal =      jgr,
945      year =         1997,
946      volume =       102,
947      number =       {C3},
948      pages =        {5733-5752},
949      url      =     {http://mitgcm.org/pdfs/96JC02775.pdf},
950    }
951    
952    @Article{marshall:97b,
953      author =       {Marshall, J. and A. Adcroft and C. Hill and L. Perelman and C. Heisey},
954      title =        {A finite-volume, incompressible Navier Stokes model for
955                      studies of the ocean on parallel computers},
956      journal =      jgr,
957      year =         1997,
958      volume =       102,
959      number =       {C3},
960      pages =        {5753-5766},
961      url      =     {http://mitgcm.org/pdfs/96JC02776.pdf},
962    }
963    
964    @Article{adcroft:97,
965      author =       {Adcroft, A.J. and Hill, C.N. and J. Marshall},
966      title =        {Representation of topography by shaved cells in a height
967                      coordinate ocean model},
968      journal =      mwr,
969      year =         1997,
970      volume =       125,
971      pages =        {2293-2315},
972      url   =        {http://mitgcm.org/pdfs/mwr_1997.pdf},
973      doi       =    {10.1175/1520-0493\%281997\%29125<2293:ROTBSC>2.0.CO;2},
974    }
975    
976    @Article{adcroft:04a,
977      author =       {Adcroft, A. and J.-M. Campin},
978      title =        {Re-scaled height coordinates for accurate representation
979                      of free-surface flows in ocean circulation models},
980      journal =      om,
981      year =         2004,
982      volume =       7,
983      pages =        {269-284},
984      doi   =        {10.1016/j.ocemod.2003.09.003},
985    }
986    
987    @Article{adcroft:04b,
988      author =       {Adcroft, A. and J.-M. Campin and C. Hill and J. Marshall},
989      title =        {Implementation of an Atmosphere-Ocean General Circulation Model
990                      on the Expanded Spherical Cube},
991      journal =      mwr,
992      year =         2004,
993      volume =       132,
994      pages =        {2845-2863},
995      url   =        {http://mitgcm.org/pdfs/mwr_2004.pdf},
996      doi     =      {10.1175/MWR2823.1},
997    }
998    
999    @inproceedings{adcroft:04c,
1000      author =       {Adcroft, A. and C. Hill and J.-M. Campin and J. Marshall
1001                      and P. Heimbach},
1002      title =        {Overview of the Formulation and Numerics of the {MIT}GCM},
1003      booktitle =   {Proceedings of the ECMWF seminar series on Numerical Methods,
1004                     Recent developments in numerical methods for atmosphere and
1005                     ocean modelling},
1006      year =         2004,
1007      pages =        {139-149},
1008      url   =        {http://mitgcm.org/pdfs/ECMWF2004-Adcroft.pdf},
1009     publisher =     ecmwf
1010    }
1011    
1012    @Article{marshall:04,
1013      author =       {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White},
1014      title =        {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms},
1015      journal =      mwr,
1016      year =         2004,
1017      volume =       132,
1018      pages =        {2882-2894},
1019      url   =        {http://mitgcm.org/pdfs/a_o_iso.pdf},
1020      doi    =       {10.1175/MWR2835.1},
1021    }
1022    
1023    @Article{visbeck:97,
1024      author =       {M. Visbeck and J. Marshall and T. Haine and M. Spall},
1025      title =        {Specification of eddy transfer coefficients in coarse-resolution ocean circulation models},
1026      journal =      jpo,
1027      year =         1997,
1028      volume =       27,
1029      number =       3,
1030      pages =        {381-402}
1031    }
1032    
1033    @Article{shaw:98,
1034      author =       {Shaw; A. Arvind, Cho, K.-C., Hill, C., Johnson, R.P.
1035                      and Marshall, J.},
1036      title =        {A comparison of implicitly parallel multi-threaded and
1037                      data-parallel implementations of an ocean model based
1038                      on the Navier-Stokes equations},
1039      journal =      {J. of Parallel and Distributed Computing},
1040      year =         1998,
1041      volume =       48,
1042      number =       1,
1043      pages =        {1-51}
1044    }
1045    
1046    @Article{mjn:99,
1047      author =       {Marshall, J., Jamous, D and J. Nilsson},
1048      title =        {Reconciling `thermodynamic' and `dynamic' methods of
1049                      computation of water-mass transformation rates},
1050      journal =      {DSR},
1051      year =         1999,
1052      volume =       46,
1053      pages =        {545-572}
1054    }
1055    
1056    @Article{ms:99,
1057      author =       {Marshall, J and F. Schott},
1058      title =        {Open ocean deep convection: observations, models and theory},
1059      journal =      {Rev. Geophys.},
1060      year =         1999,
1061      volume =       37,
1062      number =       1,
1063      pages =        {1-64}
1064    }
1065    
1066    @Article{adcroft:99,
1067      author =       {Adcroft, A., Hill C. and J. Marshall},
1068      title =        {A new treatment of the Coriolis terms in C-grid models
1069                      at both high and low resolutions},
1070      journal =      mwr,
1071      year =         1999,
1072      volume =       127,
1073      pages =        {1928-1936},
1074      url   =        {http://mitgcm.org/pdfs/mwr_1999.pdf},
1075      doi   =        {10.1175/1520-0493\%281999\%29127<1928:ANTOTC>2.0.CO;2},
1076    }
1077    
1078    @InProceedings{hill:99,
1079      author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall},
1080      title =        {A Strategy for Terascale Climate Modeling},
1081      booktitle =    {In Proceedings of the Eighth ECMWF Workshop on the Use of Parallel Processors in Meteorology},
1082      year =         1999,
1083      pages = {406-425},
1084      publisher =    {World Scientific},
1085    }
1086    
1087    @Article{wardle:00,
1088      author =       {Wardle R. and Marshall J.},
1089      title =        {Representation of eddies in primitive equation models by a PV flux},
1090      journal =      jpo,
1091      year =         2000,
1092      volume =       30,
1093      number =       10,
1094      pages =        {2481-2503}
1095    }
1096    
1097    @Article{ac:02,
1098      author =       {Adcroft, A. and J.-M. Campin},
1099      title =        {Comparison of finite volume schemes and direct-space-time
1100                      methods for ocean circulation models},
1101      journal =      om,
1102      year =         2002,
1103      note =         {in preparation}
1104    }
1105    
1106    @Article{adcroft:02,
1107      author =       {Adcroft, A., et~al.},
1108      title =        {Energy conversion in discrete numerical models},
1109      journal =      om,
1110      year =         2002,
1111      note =         {in preparation}
1112    }
1113    
1114    @InCollection{arakawa:77,
1115      author =       {Arakawa, A. and Lamb, V.},
1116      title =        {Computational Design of the Basic Dynamical Processes of
1117                      the UCLA General Circulation Model},
1118      booktitle =    {Methods in Computational Physics},
1119      pages =        {174-267},
1120      publisher =    {Academic Press},
1121      year =         1977,
1122      volume =       17
1123    }
1124    
1125    @Article{miller_white:84,
1126      author =       {Miller, M. J. and White, A. A.},
1127      title =        {On the non-hydrostatic equations in pressure
1128                      and sigma coordiantes},
1129      journal =      qjrms,
1130      year =         1984,
1131      volume =       110,
1132      pages =        {515-533}
1133    }
1134    
1135    @Article{white:89,
1136      author =       {White, A. A.},
1137      title =        {An extended version of a nonhydrostatic, pressure coordiante model},
1138      journal =      qjrms,
1139      year =         1989,
1140      volume =       115,
1141      pages =        {1243-1251}
1142    }
1143    
1144    @Article{adcroft:98,
1145      author =       {Adcroft, A. and Marshall, D.},
1146      title =        {How slippery are piecewise-constant coastlines in numerical
1147                      ocean models?},
1148      journal =      {Tellus},
1149      year =         1998,
1150      volume =       50,
1151      number =       1,
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1417      TITLE       = "Modeling Arctic Sea Ice with an Efficient Plastic Solution",
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1439      institution =  {MIT Joint Program of the Science and Policy of Global Change},
1440      year =         {2005},
1441      OPTnumber =    {122},
1442      address =      {Cambridge, MA},
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1444    }
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1449                      Biogeochemistry Models},
1450      journal =      {Ocean Modeling},
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1472      title =        {A global wind stress climatology based on ECMWF analyses},
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1477      number =       {NCAR/TN-338+STR},
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1489      OPTnumber =    {},
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1500     publisher    = {Gordon and Breach, Scientific Publishers}
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1529     number       = {104606-Vol 3},
1530     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
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1607     type         = {NASA Technical Memorandum},
1608     number       = {104538},
1609     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1610     note         = {http://www.gmao.nasa.gov/},
1611    }
1612    
1613    @Article{ks:92,
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1620     pages        = {2697-2715}
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1648     volume       = {120},
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1673     title        = {  A computation of the stratospheric
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1675     journal      = jas,
1676     volume       = {44},
1677     pages        = {859-876}
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1684    and the influence of recent improvements in the parameterization of convection in the GLA GCM.  },
1685     journal      = mwr,
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1693     title        = {  Dynamical aspects of climate simulations Using the GEOS
1694    General Circulation Model},
1695     institution  = {National Aeronautics and Space Administration},
1696     type         = {NASA Technical Memorandum},
1697     number       = {104606 Volume 10},
1698     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1699     note         = {http://www.gmao.nasa.gov/},
1700    }
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1706    turbulent fluid flow at high Reynolds and Peclet numbers.  },
1707     journal      = jfm,
1708     volume       = {62},
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1716    atmospheric boundary layer.},
1717     journal      = {Atmos. Environ.},
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1726     journal      = qjrms,
1727     volume       = {122},
1728     pages        = {903-927}
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1740     volume         = {125},
1741     pages          = {391-423}
1742                      }
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1758     journal        = {Climate Dyn.},
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1770     pages          = {620-622}
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1778     volume         = {126},
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1782    @TechReport{MPI-std-20,
1783      author =       {{Message Passing Interface Forum}},
1784      title =        {{MPI}: A Message-Passing Interface standard (version 2.0)},
1785      institution =  {mpi-forum.org},
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1787    }
1788    
1789    @Article{cam08,
1790      author =       {Jean-Michel Campin and John Marshall and David
1791                      Ferreira},
1792      title =        {Sea-Ice Ocean Coupling Using a Rescaled Vertical
1793                      Coordinate z$^\ast$},
1794      journal =      om,
1795      volume =       24,
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1797      pages =        {1--14},
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1799      year =         2008
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1805      title =        {Large-Scale Sea Ice Drift and Deformation:
1806                      {C}omparison between Models and Observations in the
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1818                      increases},
1819      booktitle =    {Climate processes and climate sensitivity},
1820      pages =        {238--253},
1821      publisher =    {AGU},
1822      year =         1984,
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1824      volume =       29,
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1826      address =      {Washington, D.C.}
1827    }
1828    
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1831      title =        {A Diagnostic Ice-Ocean Model},
1832      journal =      jpo,
1833      year =         1987,
1834      volume =       17,
1835      number =       7,
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1837    }
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1840      author =       {Hibler, III, William D. and Chi F. Ip},
1841      title =        {The effect of sea ice rheology on {A}rcitc buoy
1842                      drift},
1843      booktitle =    {Ice Mechanics},
1844      pages =        {255--264},
1845      publisher =    {Am. Soc. of Mech. Eng.},
1846      year =         1995,
1847      editor =       {John P. Dempsey and Y. D. S. Rajapakse},
1848      volume =       204,
1849      series =       {AMD},
1850      address =      {New York}
1851    }
1852    
1853    @Article{hibler97,
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1855      title =        {On Modeling Sea-Ice Fracture and Flow in Numerical
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1865      title =        {Method of Lines and Direct Discretization: a
1866                      Comparison for Linear Advection},
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1873    }
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1875    @Article{leppaeranta83,
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1877      title =        {A Growth Model for Black Ice, Snow Ican and Snow
1878                      Thickness in Subarctic Basins},
1879      journal =      {Nordic Hydrology},
1880      year =         1983,
1881      volume =       14,
1882      pages =        {59--70}
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1887      title =        {A Global Ocean-Atmosphere Climate Model with Seasonal
1888                      Variation for Future Studies of Climate Sensitivity},
1889      journal =      dao,
1890      year =         1979,
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1897                      J.-M. Campin and B. Cheng and B. Ciotti and
1898                      I. Fukumori and A. Koehl and P. Heimbach and
1899                      C. Henze and T. Lee and D. Stammer and J. Taft and
1900                      J. Zhang},
1901      title =        {{NASA} Supercomputer Improves Prospects for Ocean
1902                      Climate Research},
1903      journal =      eos,
1904      year =         2005,
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1907      pages =        {89, 95--96}
1908    }
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1910    @Article{parkinson79,
1911      author =       {{Parkinson}, Claire~L. and {Washington}, Warren~M.},
1912      title =        "{A Large-Scale Numerical Model of Sea Ice}",
1913      journal =      jgr,
1914      year =         1979,
1915      month =        jan,
1916      volume =       84,
1917      number =       {C1},
1918      pages =        {311--337},
1919      adsurl =       {http://adsabs.harvard.edu/cgi-bin/nph-bib_query?bibcode=1979JGR....84..311P&db_key=PHY},
1920      adsnote =      {Provided by the Smithsonian/NASA Astrophysics Data
1921                      System}
1922    }
1923    
1924    @Article{semtner84,
1925      author =       {Semtner, Jr., Albert J.},
1926      title =        {On Modelling the Seasonal Thermodynamic Cycle of Sea
1927                      Ice in Studies of Climatic Change},
1928      journal =      cch,
1929      year =         1984,
1930      volume =       6,
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1934    
1935    @Article{zhang97,
1936      author =       {Jinlun Zhang and Hibler, III, William D.},
1937      title =        {On an Efficient Numerical Method for Modeling Sea Ice Dynamics},
1938      journal =      jgr,
1939      year =         1997,
1940      volume =       102,
1941      number =       {C4},
1942      pages =        {8691--8702}
1943    }
1944    
1945    @Article{zhang03,
1946      author =       {Jinlun Zhang and Drew A. Rothrock},
1947      title =        {Modeling Global Sea Ice with a Thickness and
1948                      Enthalpy Distribution Model in Generalized
1949                      Curvilinear Coordinates},
1950      journal =      mwr,
1951      year =         2003,
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1954      pages =        {845--861}
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1956    
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1958      author =       {Aike Beckmann and Hartmut H. Hellmer and Ralph
1959                      Timmermann},
1960      title =        {A Numerical Model of the {W}eddell {S}ea:
1961                      Large-Scale Circulation and Water Mass Distribution},
1962      journal =      jgr,
1963      year =         1999,
1964      volume =       104,
1965      number =       {C10},
1966      pages =        {23,375--23,392}
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1968    
1969    @Article{grosfeld97,
1970      author =       {Klaus Grosfeld and R{\"u}diger Gerdes and J{\"u}rgen
1971                      Determann},
1972      title =        {Thermohaline Circulation and Interaction between Ice
1973                      Shelf Cavities and the Adjacent Open Water},
1974      journal =      jgr,
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1980    
1981    @Article{hellmer89,
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1985      journal =      {Antarct. Sci.},
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1990    
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1994                      Base of an Ice Shelf},
1995      journal =      jpo,
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2007      journal =      om,
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2014    
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2016      author =       {Adrian Jenkins and Hartmut H. Hellmer and David
2017                      M. Holland},
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2019                      of Conservative Boundary Conditions at an Ice-Ocean
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2042      author =       {Madlen Kimmritz and Sergey Danilov and Martin Losch},
2043      title =        {On the Convergence of the Modified
2044                      Elastic-Viscous-Plastic Method of Solving for
2045                      Sea-Ice Dynamics},
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2053      OPTnote =      {},
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2058      author =       {Klymak, Jody M. and Sonya M. Legg},
2059      title =        {A simple mixing scheme for models that resolve
2060                      breaking internal waves},
2061      journal =      om,
2062      year =         2010,
2063      volume =       33,
2064      pages =        {224--234},
2065      doi =          {10.1016/j.ocemod.2010.02.005}
2066    }
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2069      author =       {Martin Losch},
2070      title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean
2071                      General Circulation Model},
2072      journal =      jgr,
2073      year =         2008,
2074      volume =       113,
2075      number =       {C08043},
2076      doi =          {10.1029/2007JC004368}
2077    }
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2080      author =       {Losch, Martin and Menemenlis, Dimitris and Campin,
2081                      Jean-Michel and Heimbach, Patrick and Hill, Chris},
2082      title =        {On the formulation of sea-ice models. {P}art 1:
2083                      Effects of different solver implementations and
2084                      parameterizations},
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2087      volume =       33,
2088      number =       {1--2},
2089      pages =        {129--144},
2090      doi =          {10.1016/j.ocemod.2009.12.008}
2091    }
2092    
2093    @Article{losch14:_jfnk,
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2095                      Jean-Fran{\c{c}}ois Lemieux and Anna Vanselow},
2096      title =        {A Parallel {J}Acobian-Free {N}ewton-{K}rylov Solver
2097                      for a Coupled Sea Ice-Ocean Model },
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2099      volume =       {257},
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2108      title =        {Numerical Convergence of Viscous-Plastic Sea Ice
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2110      journal =      jgr,
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2112      volume =       114,
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2116    @Article{lemieux10,
2117      author =       {Jean-Fran{\c{c}}ois Lemieux and Bruno Tremblay and Jan
2118                      Sedl{\'a}{\v{c}}ek and Paul Tupper and Stephen
2119                      Thomas and David Huard and Jean-Pierre Auclair},
2120      title =        {Improving the Numerical Convergence of
2121                      Viscous-Plastic Sea Ice Models with the
2122                      {J}acobian-Free {N}ewton-{K}rylov Method},
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2125      volume =       229,
2126      pages =        {2840--2852},
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2129    @Article{lemieux12,
2130      author =       {Jean-Fran{\c{c}}ois Lemieux and Dana Knoll and Bruno
2131                      Tremblay and David M. Holland and Martin Losch},
2132      title =        {A Comparison of the {J}acobian-free
2133                      {N}ewton-{K}rylov Method and the {EVP} Model for
2134                      Solving the Sea Ice Momentum Equation with a
2135                      Viscous-Plastic Formulation: a Serial Algorithm
2136                      Study},
2137      journal =      jcp,
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2140      number =       17,
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2146      Title =        {{J}acobian-free {N}ewton-{K}rylov Methods: a Survey
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2151      Pages =        {357--397},
2152      doi =          {10.1016/j.jcp.2003.08.010},
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2173     title          = {Evaluation of ocean model ventilation with CFC-11:
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