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revision 1.1 by heimbach, Thu Oct 4 19:27:24 2001 UTC revision 1.51 by mlosch, Wed Jan 21 18:06:09 2015 UTC
# Line 1  Line 1 
1    @string{angl    = {Ann.\ Glaciol.}}
2  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}
3  @string{bams    = {Bull.~Am.~Met.~Soc.}}  @string{bams    = {Bull.~Am.~Met.~Soc.}}
4  @string{blm     = {Bound.~Layer~Meteorol.}}  @string{blm     = {Bound.~Layer~Meteorol.}}
5  @string{jgr     = {J.~Geophys.~Res.}}  @string{climd   = {Clim.~Dynamics}}
6  @string{ijrs    = {Int.~J.~Remote Sensing}}  @string{cch     = {Clim.\ Change}}
7    @string{cup     = {Cambridge University Press}}
8    @string{dao     = {Dyn.~Atmos.~Oceans}}
9    @string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}}
10    @string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}}
11    @string{dsr     = {Deep Sea Res.}}
12    @string{ecmwf   = {ECMWF}}
13    @string{eos     = {Eos~Trans.\ AGU}}
14    @string{esa     = {European Space Agency (ESA)}}
15    @string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}}
16    @string{estec   = {European Space Research and Technology Centre (ESTEC)}}
17    @string{gaos    = {Global Atmos.~Ocean System}}
18    @string{grl     = {Geophys.~Res.~Lett.}}
19    @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}
20    @string{ifremer = {IFREMER/CERSAT}}
21    @string{igarss  = {IEEE Press, Piscataway, N.J., USA}}
22    @string{jam     = {J.~Appl.~Meteor.}}
23    @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}
24  @string{jas     = {J.~Atmos.~Sci.}}  @string{jas     = {J.~Atmos.~Sci.}}
 @string{jpo     = {J.~Phys.~Oceanogr.}}  
25  @string{jclim   = {J.~Clim.}}  @string{jclim   = {J.~Clim.}}
26  @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}  @string{jcp     = {J.~Comput.~Phys.}}
27  @string{jfm     = {J.~Fluid Mech.}}  @string{jfm     = {J.~Fluid Mech.}}
28  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}  @string{jgr     = {J.~Geophys.~Res.}}
29    @string{ijrs    = {Int.~J.~Remote Sensing}}
30  @string{jms     = {J.~Mar.~Sys.}}  @string{jms     = {J.~Mar.~Sys.}}
31  @string{gaos    = {Global Atmos.~Ocean System}}  @string{jpo     = {J.~Phys.~Oceanogr.}}
32  @string{grl     = {Geophys.~Res.~Lett.}}  @string{mpi     = {MPI f\"ur Meteorologie}}
 @string{dsr     = {Deep Sea Res.}}  
 @string{dao     = {Dyn.~Atmos.~Oceans}}  
33  @string{mwr     = {Mon.~Wea.~Rev.}}  @string{mwr     = {Mon.~Wea.~Rev.}}
34    @string{om      = {Ocean Modelling}}
35    @string{ptrsl   = {{Phil.~Trans.~R.~Soc.~Lond.}}}
36  @string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}}  @string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}}
37    @string{siscicom= {SIAM J.\ Sci.\ Comput.}}
38  @string{tel     = {Tellus}}  @string{tel     = {Tellus}}
 @string{cup     = {Cambridge University Press}}  
 @string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}}  
 @string{ifremer = {IFREMER/CERSAT}}  
 @string{igarss  = {IEEE Press, Piscataway, N.J., USA}}  
 @string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}}  
 @string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}}  
 @string{mpi     = {MPI f\"ur Meteorologie}}  
 @string{ecmwf   = {ECMWF}}  
 @string{estec   = {European Space Research and Technology Centre  
                         (ESTEC)}}  
 @string{esa     = {European Space Agency (ESA)}}  
39    
40  @Article{bis-eta:92,  @Article{bis-eta:92,
41   author         = {C.H. Bishof and G.F. Corliss and L. Green and   author         = {C.H. Bishof and G.F. Corliss and L. Green and
# Line 39  Line 47 
47   volume         = {3},   volume         = {3},
48   pages          = {625--638},   pages          = {625--638},
49                    }                    }
50    
51  @incollection{bis:94,  @incollection{bis:94,
52   author         = {C.H. Bishof},   author         = {C.H. Bishof},
53   year           = 1994,   year           = 1994,
# Line 52  Line 60 
60   publisher      = {Kluwer},   publisher      = {Kluwer},
61   address        = {Dordrecht, NL},   address        = {Dordrecht, NL},
62                    }                    }
63    
64  @techreport{bis-eta:94,  @techreport{bis-eta:94,
65   author         = {C. Bishof and A. Carle and P. Khademi and   author         = {C. Bishof and A. Carle and P. Khademi and
66                    A. Maurer},                    A. Maurer},
# Line 63  Line 71 
71                    Computer Science Division},                    Computer Science Division},
72   type           = {Argonne Preprint},   type           = {Argonne Preprint},
73   number         = {ANL-MCS-P981-1194},   number         = {ANL-MCS-P981-1194},
74   address        = {ANL; 9700 South Cass Ave.;   address        = {ANL; 9700 South Cass Ave.;
75                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
76   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
77                    }                    }
78    
79    @Article{bouillon13,
80      author =       {Sylvain Bouillon and Thierry Fichefet and Vincent
81                      Legat and Gurvan Madec},
82      title =        {The Elastic-Viscous-Plastic Method Revisited},
83      journal =      omg,
84      volume =       71,
85      number =       0,
86      pages =        {2--12},
87      year =         2013,
88      note =         {Arctic Ocean},
89      issn =         {1463-5003},
90      doi =          {10.1016/j.ocemod.2013.05.013},
91      url =          {http://dx.doi.org/10.1016/j.ocemod.2013.05.013},
92    }
93    @ARTICLE{bryan:84,
94      author = {Kirk Bryan},
95      title = {Accelerating the convergence to equilibrium of Ocean-Climate Models},
96      journal = jpo,
97      year = {1984},
98      volume = {14},
99      number = {4},
100      pages = {666-673},
101    }
102    
103    @ARTICLE{bugi-hill:06,
104      author = {V. Bugnion and C. Hill},
105      title = {Equilibration mechanisms in an adjoint ocean general
106               circulation model},
107      journal = {Ocean Dynamics},
108      year = {2006},
109      volume = {56},
110      number = {1},
111      pages = {51-61},
112      doi   = {10.1007/s10236-005-0052-z},
113    }
114    
115  @techreport{bis-roh:97,  @techreport{bis-roh:97,
116   author         = {C. Bishof and L. Roh},   author         = {C. Bishof and L. Roh},
117   year           = 1997,   year           = 1997,
# Line 77  Line 121 
121                    Computer Science Division},                    Computer Science Division},
122   type           = {Argonne Preprint},   type           = {Argonne Preprint},
123   number         = {ANL-MCS-P626-1196},   number         = {ANL-MCS-P626-1196},
124   address        = {ANL; 9700 South Cass Ave.;   address        = {ANL; 9700 South Cass Ave.;
125                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
126   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
127                    }                    }
128    
129  @Article{cou-tal:87,  @Article{cou-tal:87,
130   author         = {P. Courtier and O. Talagrand},   author         = {P. Courtier and O. Talagrand},
131   year           = 1987,   year           = 1987,
132   title          = {Variational assimilation of meteorological   title          = {Variational assimilation of meteorological
133                    observations with the adjoint vorticity equation.                    observations with the adjoint vorticity equation.
134                    II: Numerical results},                    II: Numerical results},
135   journal        = qjrms,   journal        = qjrms,
136   volume         = {113},   volume         = {113},
137   pages          = {1329--1347},   pages          = {1329--1347},
138                    }                    }
139    
140  @Article{cou-tal:90,  @Article{cou-tal:90,
141   author         = {P. Courtier and O. Talagrand},   author         = {P. Courtier and O. Talagrand},
142   year           = 1990,   year           = 1990,
# Line 103  Line 147 
147   volume         = {42A},   volume         = {42A},
148   pages          = {531--549},   pages          = {531--549},
149                    }                    }
150    
151  @Article{cou-eta:94,  @Article{cou-eta:94,
152   author         = {P. Courtier and J.-N. Th{\'e}paut and   author         = {P. Courtier and J.-N. Th{\'e}paut and
153                    A. Hollingsworth},                    A. Hollingsworth},
# Line 114  Line 158 
158   volume         = {120},   volume         = {120},
159   pages          = {1367--1387},   pages          = {1367--1387},
160                    }                    }
161    
162    @ARTICLE{durr:91,
163      author = {Dale R. Durran},
164      title = {The Third-Order Adams-Bashforth Method: An Attractive Alternative
165               to Leapfrog Time Differencing},
166      journal = mwr,
167      year = {1991},
168      volume = {119},
169      pages  = {702-720},
170    }
171    
172    
173    @ARTICLE{dutk-etal:06,
174      author = {S. Dutkiewicz and M.J. Follows and P. Heimbach and J. Marshall},
175      title = {Controls on ocean productivity and air-sea carbon flux:
176               An adjoint model sensitivity study},
177      journal = grl,
178      year = {2006},
179      volume = {33},
180      pages  = {L02603},
181      doi    = {10.1029/2005GL024987},
182    }
183    
184  @Article{err:97,  @Article{err:97,
185   author         = {R.M. Errico},   author         = {R.M. Errico},
186   year           = 1997,   year           = 1997,
# Line 123  Line 189 
189   volume         = {78},   volume         = {78},
190   pages          = {2577--2591},   pages          = {2577--2591},
191                    }                    }
192    
193  @Article{far-moo:92,  @Article{far-moo:92,
194   author         = {B.F. Farrell and A.M. Moore},   author         = {B.F. Farrell and A.M. Moore},
195   year           = {1992},   year           = {1992},
# Line 133  Line 199 
199   volume         = {22},   volume         = {22},
200   pages          = {338--349},   pages          = {338--349},
201                    }                    }
202    
203  @Article{far-ioa:96a,  @Article{far-ioa:96a,
204   author         = {B.F. Farrell and P. Ioannou},   author         = {B.F. Farrell and P. Ioannou},
205   year           = {1996a},   year           = {1996a},
# Line 143  Line 209 
209   volume         = {53},   volume         = {53},
210   pages          = {2025--2040},   pages          = {2025--2040},
211                    }                    }
212    
213  @Article{far-ioa:96b,  @Article{far-ioa:96b,
214   author         = {B.F. Farrell and P. Ioannou},   author         = {B.F. Farrell and P. Ioannou},
215   year           = {1996b},   year           = {1996b},
# Line 153  Line 219 
219   volume         = {53},   volume         = {53},
220   pages          = {2041--2053},   pages          = {2041--2053},
221                    }                    }
222    
223  @techreport{fau-pap:98,  @techreport{fau-pap:98,
224   author         = {C. Faure and Y. Papegay},   author         = {C. Faure and Y. Papegay},
225   year           = 1998,   year           = 1998,
# Line 166  Line 232 
232                    06902 Sophia Antipolis Cedex; France},                    06902 Sophia Antipolis Cedex; France},
233   note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},   note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},
234                    }                    }
235    
236  @Article{fau:00,  @Article{fau:00,
237   author         = {C. Faure},   author         = {C. Faure},
238   year           = {2000},   year           = {2000},
# Line 174  Line 240 
240   journal        = {Optimisation Methods and Software},   journal        = {Optimisation Methods and Software},
241   note           = {in press},   note           = {in press},
242                    }                    }
243    
244    @Article{fer-eta:05,
245     author         = {D. Ferreira and J. Marshall and P. Heimbach},
246     year           = 2005,
247     title          = {Estimating Eddy Stresses by Fitting Dynamics to Observations
248                       using a Residual-Mean Ocean Circulation Model and Its Adjoint},
249     journal        = jpo,
250     volume         = {35},
251     pages          = {1891--1910},
252                      }
253    
254    @Article{gas-eta:90,
255     author         = {P. Gaspar and Y. Gr\'egoris and J.-M. Lefevre},
256     year           = 1990,
257     title          = {A Simple Eddy Kinetic Energy Model for Simulations of the
258                       Oceanic Vertical Mixing: Tests at Station Papa and Long-Term
259                       Upper Ocean Study Site},
260     journal        = jgr,
261     volume         = {95 (C9)},
262     pages          = {16,179--16,193},
263                      }
264    
265  @Article{gen-mcw:90,  @Article{gen-mcw:90,
266   author         = {P.R. Gent and J.C. McWilliams},   author         = {P. R. Gent and J. C. McWilliams},
267   year           = 1990,   year           = 1990,
268   title          = {Isopycnal mixing in ocean circulation models},   title          = {Isopycnal mixing in ocean circulation models},
269   journal        = jpo,   journal        = jpo,
270   volume         = {20},   volume         = {20},
271   pages          = {150--155},   pages          = {150--155},
272                    }                    }
273    
274  @Article{gen-eta:95,  @Article{gen-eta:95,
275   author         = {P.R. Gent and J. Willebrand and T.J. McDougall   author         = {P. R. Gent and J. Willebrand and T. J. McDougall and J. C. McWilliams},
                   and J.C. McWilliams},  
276   year           = 1995,   year           = 1995,
277   title          = {Parameterizing eddy-induced tracer transports in   title          = {Parameterizing eddy-induced tracer transports in ocean circulation models},
                   ocean circulation models},  
278   journal        = jpo,   journal        = jpo,
279   volume         = {25},   volume         = {25},
280   pages          = {463--474},   pages          = {463--474},
281                    }                    }
282    
283  @Article{gie-kam:98,  @Article{gie-kam:98,
284   author         = {R. Giering and T. Kaminski},   author         = {R. Giering and T. Kaminski},
285   year           = 1998,   year           = 1998,
# Line 207  Line 292 
292  @techreport{gie:99,  @techreport{gie:99,
293   author         = {R. Giering},   author         = {R. Giering},
294   year           = 1999,   year           = 1999,
295   title          = {Tangent linear and Adjoint Model Compiler.   title          = {Tangent linear and Adjoint Model Compiler.
296                    Users manual 1.4 (TAMC Version 5.2)},                    Users manual 1.4 (TAMC Version 5.2)},
297   institution    = {Massachusetts Institute of Technology},   institution    = {Massachusetts Institute of Technology},
298   type           = {Report},   type           = {Report},
# Line 216  Line 301 
301                    02139; USA},                    02139; USA},
302   note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},   note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},
303                    }                    }
304    
305  @incollection{gie:00,  @incollection{gie:00,
306   author         = {R. Giering},   author         = {R. Giering},
307   editor         = {P. Kasibhatla and M. Heimann and P. Rayner and   editor         = {P. Kasibhatla and M. Heimann and P. Rayner and
# Line 240  Line 325 
325   volume         = {45},   volume         = {45},
326   pages          = {407--435},   pages          = {407--435},
327                    }                    }
328    
329  @book{gil-eta:81,  @book{gil-eta:81,
330   author         = {P.E. Gill and W. Murray and M.H. Wright},   author         = {P.E. Gill and W. Murray and M.H. Wright},
331   title          = {Practical optimization},   title          = {Practical optimization},
332   year           = 1981,   year           = 1981,
333   publisher      = {Academic Press},   publisher      = {Academic Press},
334   address        = {London},   address        = {London},
335   pages          = {401 pp.},   pages          = {401 pp.},
336                    }                    }
337                                                                      
338    @incollection{gri:89,
339     author         = {A. Griewank},
340     year           = 1989,
341     title          = {On automatic differentiation},
342     booktitle      = {Mathematical Programming: Recent Developments and
343                      Applications},
344     pages          = {83--108},
345     editor         = {M. Iri and K. Tanabe},
346     publisher      = {Kluwer},
347     address        = {Dordrecht, NL},
348                      }
349    
350    @Article{gri:92,
351      author =       {A.~Griewank},
352      title =        {Achieving logarithmic growth of temporal and spatial
353      complexity in reverse {A}utomatic {D}ifferentiation},
354      journal       = {Optimization Methods and Software},
355      year          = {1992},
356      volume        = {1},
357      pages         = {35--54}
358    }
359    
360  @book{gri:00,  @book{gri:00,
361   author         = {A. Griewank},   author         = {A. Griewank},
362   title          = {Evaluating Derivatives. Principles and Techniques   title          = {Evaluating Derivatives. Principles and Techniques
# Line 258  Line 365 
365   series         = {Frontiers in Applied Mathematics},   series         = {Frontiers in Applied Mathematics},
366   volume         = {19},   volume         = {19},
367   publisher      = {SIAM},   publisher      = {SIAM},
368   address        = {Philadelphia},   address        = {Philadelphia},
369   pages          = {369 pp.},   pages          = {369 pp.},
370                    }                    }
371                                                                      
372  @Article{hal-eta:82,  @Article{hal-eta:82,
373   author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},   author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},
374   year           = 1982,   year           = 1982,
# Line 271  Line 378 
378   volume         = {39},   volume         = {39},
379   pages          = {2038--3050},   pages          = {2038--3050},
380                    }                    }
381    
382    @Article{Haney,
383      author =       {R.L. Haney},
384      title =        {Surface thermal boundary conditions for ocean
385                      circulation models},
386      journal =      jpo,
387      year =         1971,
388      volume =       1,
389      pages =        {241--248}
390    }
391    
392    @Article{held-suar:94,
393     author         = {I.M. Held and M.J. Suarez},
394     year           = {1994},
395     title          = {A proposal for the intercomparison of the dynamical cores of atmospheric general circulation models},
396     journal        = {Bulletin of the American Meteorological Society},
397     volume         = {75(10)},
398     pages          = {1825-1830}
399    }
400    
401  @Article{hil-eta:01,  @Article{hil-eta:01,
402   author         = {C. Hill and M. Follows and V. Bugnion and   author         = {C. Hill and M. Follows and V. Bugnion and
403                    J. Marshall},                    J. Marshall},
404   year           = {2001},   year           = {2002},
405   title          = {Spatial and Temporal Impacts of ocean general   title          = {Spatial and Temporal Impacts of ocean general
406                    circulation on carbon sequestration},                    circulation on carbon sequestration},
407   journal        = {journal ???},   journal        = {Global Biogeochemical Cycles},
408   note           = {submitted},   note           = {submitted},
409                    }                    }
410    
411    @ARTICLE{hib80,
412      author =       {Hibler, III, William D.},
413      TITLE       = "Modeling a Variable Thickness Sea Ice Cover",
414      JOURNAL     = mwr,
415      YEAR        = 1980,
416      VOLUME      = 1,
417      PAGES       = "1943-1973"
418    }
419    
420    @Article{Holland75,
421     author         = {W.R. Holland and L. B. Lin},
422     year           = {1975a},
423     title          = {On the origin of mesoscale eddies and their contribution
424                       to the general circulation of the ocean. I. A preliminary
425                       numerical experiment},
426     journal        = jpo,
427     volume         = {5},
428     pages          = {642-657}
429                      }
430    
431    @Article{hol-lin:75b,
432     author         = {W.R. Holland and L. B. Lin},
433     year           = {1975b},
434     title          = {On the origin of mesoscale eddies and their contribution
435                       to the general circulation of the ocean. II. A parameter
436                       study},
437     journal        = jpo,
438     volume         = {5},
439     pages          = {658-669}
440                      }
441    
442    @Article{jam-oze:86,
443     author         = {B.M. Jamart and J. Ozer},
444     year           = {1986},
445     title          = {Numerical boundary layers and spurious residual flows},
446     journal        = jgr,
447     volume         = {91},
448     pages          = {10,621-10,631}
449                      }
450    
451  @book{kas-eta:00,  @book{kas-eta:00,
452   author         = {P. Kasibhatla and M. Heimann and P. Rayner and   author         = {P. Kasibhatla and M. Heimann and P. Rayner and
453                    N. Mahowald and R.G. Prinn and D.E. Hartley},                    N. Mahowald and R.G. Prinn and D.E. Hartley},
# Line 297  Line 463 
463  @Article{lar-eta:94,  @Article{lar-eta:94,
464   author         = {W.G. Large and J.C. McWilliams and S.C. Doney},   author         = {W.G. Large and J.C. McWilliams and S.C. Doney},
465   year           = 1994,   year           = 1994,
466   title          = {Oceanic vertical mixing: A review and a model   title          = {Oceanic vertical mixing: A review and a model with nonlocal boundary layer parameterization},
                   with nonlocal boundary layer parameterization},  
467   journal        = {Rev.~Geophys.},   journal        = {Rev.~Geophys.},
468   volume         = {32},   volume         = {32},
469   pages          = {363--403},   pages          = {363--403},
470                    }                    }
471    
472  @Article{lar-eta:97,  @Article{lar-eta:97,
473   author         = {W.G. Large and G. Danabasoglu and S.C. Doney   author         = {W. G. Large and G. Danabasoglu and S. C. Doney
474                    and J.C. McWilliams},                    and J. C. McWilliams},
475   year           = 1997,   year           = 1997,
476   title          = {Sensitivity to surface forcing and boundary layer   title          = {Sensitivity to surface forcing and boundary layer
477                    mixing in a global ocean model: annual-mean                    mixing in a global ocean model: Annual-mean climatology},
                   climatology},  
478   journal        = jpo,   journal        = jpo,
479   volume         = {27},   volume         = {27},
480     number         = 11,
481   pages          = {2418--2447},   pages          = {2418--2447},
482                    }                    }
483    
484  @Article{led-tal:86,  @Article{led-tal:86,
485   author         = {F.-X. {Le Dimet} and O. Talagrand},   author         = {F.-X. {Le Dimet} and O. Talagrand},
486   year           = 1986,   year           = 1986,
# Line 326  Line 491 
491   volume         = {38A},   volume         = {38A},
492   pages          = {97--110},   pages          = {97--110},
493                    }                    }
494    
495    @TechReport{lev:94a,
496      author =       {S. Levitus and T.P.Boyer},
497      title =        {{World Ocean Atlas 1994 Volume 3: Salinity}},
498      institution =  {NOAA Atlas NESDIS 3},
499      year =         1994,
500      OPTkey =       {},
501      OPTtype =      {},
502      OPTnumber =    {},
503      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
504      OPTmonth =     {},
505      OPTnote =      {},
506      OPTannote =    {}
507    }
508    
509    
510    @TechReport{Levitus94,
511      author =       {S. Levitus and T.P.Boyer},
512      title =        {{World Ocean Atlas 1994 Volume 4: Temperature}},
513      institution =  {NOAA Atlas NESDIS 4},
514      year =         1994,
515      OPTkey =       {},
516      OPTtype =      {},
517      OPTnumber =    {},
518      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
519      OPTmonth =     {},
520      OPTnote =      {},
521      OPTannote =    {}
522    }
523    
524    
525  @Article{lew-der:85,  @Article{lew-der:85,
526   author         = {J. Lewis and J. Derber},   author         = {J. Lewis and J. Derber},
527   year           = {1985},   year           = {1985},
# Line 336  Line 531 
531   volume         = {37A},   volume         = {37A},
532   pages          = {309--322},   pages          = {309--322},
533                    }                    }
534    
535  @techreport{lon:88,  @techreport{lon:88,
536   author         = {R.B. Long},   author         = {R.B. Long},
537   year           = 1988,   year           = 1988,
# Line 348  Line 543 
543   pages          = {38 pp.},   pages          = {38 pp.},
544   address        = {Delft (NL)},   address        = {Delft (NL)},
545                    }                    }
546    
547    @ARTICLE{losc-heim:06,
548      author =       {Martin Losch and Patrick Heimbach},
549      title =        {Adjoint Sensitivity of an Ocean General Circulation
550                      Model to Bottom Topography},
551      journal =      jpo,
552      year =         2007,
553      volume =       37,
554      doi =          {10.1175/JPO3017.1},
555      number =       2,
556      pages =        {377--393},
557      url    = {http://mitgcm.org/pdfs/Los2006a.pdf},
558    }
559    
560    
561  @Article{maro-wun:93,  @Article{maro-wun:93,
562   author         = {J. Marotzke and C. Wunsch},   author         = {J. Marotzke and C. Wunsch},
563   year           = 1993,   year           = 1993,
# Line 359  Line 568 
568   volume         = {98, C11},   volume         = {98, C11},
569   pages          = {20,149--20,167},   pages          = {20,149--20,167},
570                    }                    }
571    
572  @Article{maro-eta:99,  @Article{maro-eta:99,
573   author         = {J. Marotzke and R. Giering and K.Q. Zhang and   author         = {J. Marotzke and R. Giering and K.Q. Zhang and
574                    D. Stammer and C. Hill and T. Lee},                    D. Stammer and C. Hill and T. Lee},
575   year           = 1999,   year           = 1999,
576   title          = {Construction of the adjoint MIT ocean general   title          = {Construction of the adjoint MIT ocean general
# Line 371  Line 580 
580   volume         = {104, C12},   volume         = {104, C12},
581   pages          = {29,529--29,547},   pages          = {29,529--29,547},
582                    }                    }
583    
584  @Article{mars-eta:97a,  @Article{mars-eta:97a,
585   author         = {J. Marshall and C. Hill and L. Perelman and   author         = {J. Marshall and C. Hill and L. Perelman and
586                    A. Adcroft},                    A. Adcroft},
# Line 382  Line 591 
591   volume         = {102, C3},   volume         = {102, C3},
592   pages          = {5,733--5,752},   pages          = {5,733--5,752},
593                    }                    }
594    
595  @Article{mars-eta:97b,  @Article{mars-eta:97b,
596   author         = {J. Marshall and A. Adcroft and C. Hill and   author         = {J. Marshall and A. Adcroft and C. Hill and
597                    L. Perelman and C. Heisey},                    L. Perelman and C. Heisey},
598   year           = {1997b},   year           = {1997b},
599   title          = {Hydrostatic, quasi-hydrostatic and   title          = {Hydrostatic, quasi-hydrostatic and
# Line 393  Line 602 
602   volume         = {102, C3},   volume         = {102, C3},
603   pages          = {5,753--5,766},   pages          = {5,753--5,766},
604                    }                    }
605    
606  @Article{mars-sha:98,  @Article{mars-eta:98,
607   author         = {J. Marshall and H. Jones and C. Hill},   author         = {J. Marshall and H. Jones and C. Hill},
608   year           = 1998,   year           = 1998,
609   title          = {Efficient ocean modeling using   title          = {Efficient ocean modeling using
# Line 402  Line 611 
611   journal        = jms,   journal        = jms,
612   volume         = {18},   volume         = {18},
613   pages          = {115--134},   pages          = {115--134},
614     url            = {http://mitgcm.org/pdfs/journal_of_marine_systems_1998.pdf},
615     doi            = {10.1016/S0924-7963\%2898\%2900008-6},
616                    }                    }
617    
618  @Article{mcw:96,  @Article{mol:09,
619   author         = {J. McWilliams},   author         = {Andrea Molod},
620   year           = 1996,   year           = 2009,
621   title          = {Modeling the oceanic general circulation},   title          = {Running {GCM} physics and dynamics on different grids:
622   journal        = arfm,                     algorithm and tests},
623   volume         = {28},   journal        = tel,
624   pages          = {215--248},   volume         = {61A},
625     pages          = {381--393},
626                      }
627    
628    %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
629    %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.
630    %% (Available from Unidata or in PostScript form by anonymous FTP from
631    %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also
632    %%   a hypertext version of the User's Guide available at
633    %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's
634    %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are
635    %%   also available.
636    
637    @incollection{naum-etal:06,
638            Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},
639            Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},
640            Editor = {{P. Wesseling, E. O~nate and J. Periaux}},
641            Pages = {~},
642            Publisher = {TU Delft},
643            Title = {Adjoint code by source transformation with OpenAD/F},
644            Year = {2006}}
645    
646    @Article{orl:76,
647     author         = {I. Orlanski},
648     year           = 1976,
649     title          = {A simple boundary condition for unbounded hyperbolic flows},
650     journal        = jcp,
651     volume         = {21},
652     pages          = {251--269},
653                    }
654    
655    @Article{pal-rom:97,
656     author         = {T. Paluszkiewicz and R.D. Romea},
657     year           = 1997,
658     title          = {A one-dimensional model for the parameterization
659                      of deep convection in the ocean},
660     journal        = dao,
661     volume         = {26},
662     pages          = {95--130},
663                    }                    }
664    
665    @TechReport{rew:97,
666      author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
667      title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},
668                      An Interface for Data Access, Version 3},
669      institution =  {Unidata Program Center},
670      type =         {Report},
671      address =      {Boulder, Colorado},
672      year =         1997,
673      note =         {http://www.unidata.ucar.edu/packages/netcdf/},
674    }
675    
676    
677  @Article{res-eta:98,  @Article{res-eta:98,
678   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},
679   year           = 1998,   year           = 1998,
680   title          = {Circumvening storage limitations in variational   title          = {Circumventing storage limitations in variational
681                    data assimilation studies},                    data assimilation studies},
682   journal        = {SIAM J. Sci. Comput.},   journal        = {SIAM J. Sci. Comput.},
683   volume         = {19},   volume         = {19},
684   pages          = {1586--1605},   pages          = {1586--1605},
685                    }                    }
686    
687  @Article{ros-eta:93,  @Article{ros-eta:93,
688   author         = {N. Rostaing and S. Dalmas and A. Galligo},   author         = {N. Rostaing and S. Dalmas and A. Galligo},
689   year           = 1993,   year           = 1993,
# Line 431  Line 692 
692   volume         = {45A},   volume         = {45A},
693   pages          = {558--568},   pages          = {558--568},
694                    }                    }
695    
696  @incollection{she-and:89,  @incollection{she-and:89,
697   author         = {J. Sheinbaum and D.L.T. Anderson},   author         = {J. Sheinbaum and D.L.T. Anderson},
698   year           = 1989,   year           = 1989,
699   title          = {Assimilation of XBT data using a variational   title          = {Assimilation of XBT data using a variational
700                    technique},                    technique},
701   booktitle      = {Oceanic circulation models:   booktitle      = {Oceanic circulation models:
702                    Combining data and dynamics},                    Combining data and dynamics},
# Line 446  Line 707 
707   publisher      = {Springer-Verlag},   publisher      = {Springer-Verlag},
708   address        = {Berlin (Germany)},   address        = {Berlin (Germany)},
709                    }                    }
710    
711  @techreport{sta-eta:97,  @article{utke-etal:08,
712      Author =       {J. Utke and U. Naumann and M. Fagan and N. Tallent
713                      and M. Strout and P. Heimbach and C. Hill and
714                      D. Ozyurt and C. Wunsch},
715      Date-Modified ={2007-11-19 10:15:08 -0500},
716      Journal =      {{ACM} Transactions on Mathematical Software},
717      Pages =        {~},
718      Title =        {OpenAD/F: A modular open source tool for automatic
719                      differentiation of Fortran codes},
720      Volume =       {34(4)},
721      Year =         2008
722    }
723    
724    @Article{DaSilva94,
725     author         = {A. da Silva and A. C. Young and S. Levitus},
726     year           = 1994,
727     title          = {Atlas of Surface Marine Data 1994, Volume 1: Algorithms and Procedures},
728     journal        = {NOAA Atlas NESDIS},
729     volume         = {6},
730     publisher      = {U.S. Department of Commerce},
731     address        = {Washington, D.C. (USA)},
732     note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
733     url            = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
734                      }
735    
736    @techreport{stam-etal:97,
737   author         = {D. Stammer and C. Wunsch and R. Giering and   author         = {D. Stammer and C. Wunsch and R. Giering and
738                    Q. Zhang and J. Marotzke an J. Marshall and                    Q. Zhang and J. Marotzke and J. Marshall and
739                    C. Hill},                    C. Hill},
740   year           = 1997,   year           = 1997,
741   title          = {The global ocean circulation estimated from   title          = {The global ocean circulation estimated from
742                    TOPEX/POSEIDON altimetry and a general circulation                    TOPEX/POSEIDON altimetry and a general circulation
743                    model},                    model},
744   institution    = {Center for Global Change Science, Massachusetts   institution    = {Center for Global Change Science, Massachusetts
# Line 462  Line 748 
748   pages          = {40 pp.},   pages          = {40 pp.},
749   address        = {Cambridge (MA), USA},   address        = {Cambridge (MA), USA},
750                    }                    }
751    
752  @Article{sta-eta:01,  @article{stam-etal:02,
753   author         = {D. Stammer and C. Wunsch and R. Giering and    author =       {D. Stammer and C. Wunsch and R. Giering and
754                    C. Eckert and P. Heimbach and J. Marotzke and                    C. Eckert and P. Heimbach and J. Marotzke and
755                    A. Adcroft and C. Hill and J. Marshall},                    A. Adcroft and C.N. Hill and J. Marshall},
756   year           = 2001,    title =        {The global ocean circulation and transports during
757   title          = {The global ocean circulation during 1992 -- 1997,                    1992 -- 1997, estimated from ocean observations and
758                    estimated from ocean observations and a general                    a general circulation model.},
759                    circulation model},    journal =      jgr,
760   journal        = jgr,    year =         {2002a},
761   note           = {submitted},    volume =       {107(C9)},
762      pages =        {3118},
763      doi =          {10.1029/2001JC000888},
764    }
765    
766    
767    @Article{Stommel66,
768     author         = {H. Stommel},
769     year           = 1948,
770     title          = {The western intensification of wind-driven ocean currents},
771     journal        = {Trans. Am. Geophys. Union},
772     volume         = {29},
773     pages          = {206},
774                    }                    }
775    
776  @Article{tal-cou:87,  @Article{tal-cou:87,
777   author         = {O. Talagrand and P. Courtier},   author         = {O. Talagrand and P. Courtier},
778   year           = 1987,   year           = 1987,
779   title          = {Variational assimilation of meteorological   title          = {Variational assimilation of meteorological
780                    observations with the adjoint vorticity equation.                    observations with the adjoint vorticity equation.
781                    I: Theory},                    I: Theory},
782   journal        = qjrms,   journal        = qjrms,
783   volume         = {113},   volume         = {113},
784   pages          = {1311--1328},   pages          = {1311--1328},
785                    }                    }
786    
787  @Article{tal:97,  @Article{tal:97,
788   author         = {O. Talagrand},   author         = {O. Talagrand},
789   year           = 1997,   year           = 1997,
# Line 494  Line 792 
792   volume         = {75},   volume         = {75},
793   pages          = {191--209},   pages          = {191--209},
794                    }                    }
795    
796  @book{tar:87,  @book{tar:87,
797   author         = {A. Tarantola},   author         = {A. Tarantola},
798   title          = {Inverse Problem Theory: Methods for data fitting   title          = {Inverse Problem Theory: Methods for data fitting
799                    and model parameter estimation},                    and model parameter estimation},
800   year           = 1987,   year           = 1987,
801   publisher      = {Elsevier},   publisher      = {Elsevier},
802   address        = {Amsterdam},   address        = {Amsterdam},
803   pages          = {629 pp.},   pages          = {629 pp.},
804                    }                    }
805                                                                      
806  @techreport{tha:87,  @techreport{tha:87,
807   author         = {W.C. Thacker},   author         = {W.C. Thacker},
808   year           = 1987,   year           = 1987,
# Line 516  Line 814 
814   pages          = {64 pp.},   pages          = {64 pp.},
815   address        = {Geesthacht (D)},   address        = {Geesthacht (D)},
816                    }                    }
817    
818  @Article{tha-lon:88,  @Article{tha-lon:88,
819   author         = {W.C. Thacker and R.B. Long},   author         = {W.C. Thacker and R.B. Long},
820   year           = 1988,   year           = 1988,
# Line 525  Line 823 
823   volume         = {93, C2},   volume         = {93, C2},
824   pages          = {1,227--1,240},   pages          = {1,227--1,240},
825                    }                    }
826    
827  @Article{tha:88,  @Article{tha:88,
828   author         = {W.C. Thacker},   author         = {W.C. Thacker},
829   year           = 1988,   year           = 1988,
# Line 535  Line 833 
833   volume         = {93},   volume         = {93},
834   pages          = {10,655--10,665},   pages          = {10,655--10,665},
835                    }                    }
836    
837  @Article{tha:89,  @Article{tha:89,
838   author         = {W.C. Thacker},   author         = {W.C. Thacker},
839   year           = 1989,   year           = 1989,
# Line 545  Line 843 
843   volume         = {94, C5},   volume         = {94, C5},
844   pages          = {6,177--6,196},   pages          = {6,177--6,196},
845                    }                    }
846    
847  @Article{tha-rag:94,  @Article{tha-rag:94,
848   author         = {W.C. Thacker and R. Raghunath},   author         = {W.C. Thacker and R. Raghunath},
849   year           = 1994,   year           = 1994,
# Line 555  Line 853 
853   volume         = {99, C5},   volume         = {99, C5},
854   pages          = {10,131--10,141},   pages          = {10,131--10,141},
855                    }                    }
856    
857  @Article{tzi-tha:89,  @Article{tzi-tha:89,
858   author         = {E. Tziperman and W.C. Thacker},   author         = {E. Tziperman and W.C. Thacker},
859   year           = {1989},   year           = {1989},
# Line 565  Line 863 
863   volume         = {19},   volume         = {19},
864   pages          = {1471--1485},   pages          = {1471--1485},
865                    }                    }
866    
867  @Article{tzi-eta:92a,  @Article{tzi-eta:92a,
868   author         = {E. Tziperman and W.C. Thacker and R.B. Long and   author         = {E. Tziperman and W.C. Thacker and R.B. Long and
869                    S. Hwang},                    S. Hwang},
# Line 576  Line 874 
874   volume         = {22},   volume         = {22},
875   pages          = {1434--1457},   pages          = {1434--1457},
876                    }                    }
877    
878  @Article{tzi-eta:92b,  @Article{tzi-eta:92b,
879   author         = {E. Tziperman and W.C. Thacker and R.B. Long and   author         = {E. Tziperman and W.C. Thacker and R.B. Long and
880                    S. Hwang and S.R. Rintoul},                    S. Hwang and S.R. Rintoul},
# Line 587  Line 885 
885   volume         = {22},   volume         = {22},
886   pages          = {1458--1485},   pages          = {1458--1485},
887                    }                    }
888    
889  @book{wun:96,  @book{wun:96,
890   author         = {C. Wunsch},   author         = {C. Wunsch},
891   title          = {The ocean circulation inverse problem},   title          = {The ocean circulation inverse problem},
892   year           = 1996,   year           = 1996,
893   publisher      = cup,   publisher      = cup,
894   address        = {Cambridge (UK)},   address        = {Cambridge (UK)},
895   pages          = {442 pp.},   pages          = {442 pp.},
896                    }                    }
897                                                                      
898  @Article{zha-mar:99,  @Article{zha-mar:99,
899   author         = {K.Q. Zhang and J. Marotzke},   author         = {K.Q. Zhang and J. Marotzke},
900   year           = 1999,   year           = 1999,
# Line 606  Line 904 
904   volume         = {57},   volume         = {57},
905   pages          = {305--334},   pages          = {305--334},
906                    }                    }
907    
908    
909    @InCollection{hill:95,
910      author =       {Hill, C. and J. Marshall},
911      title =        {Application of a Parallel Navier-Stokes Model to
912                      Ocean Circulation in Parallel Computational Fluid
913                      Dynamics},
914      booktitle =    {Implementations and Results Using Parallel
915                      Computers},
916      pages =        {545-552},
917      publisher =    {Elsevier Science B.V.: New York},
918      year =         1995,
919      editor =       {A. Ecer, J. Periaux, N. Satofuka and S. Taylor}
920    }
921    
922    
923    @Article{marshall:97a,
924      author =       {Marshall, J. and C. Hill and L. Perelman and A. Adcroft},
925      title =        {Hydrostatic, quasi-hydrostatic, and nonhydrostatic ocean
926                     modeling},
927      journal =      jgr,
928      year =         1997,
929      volume =       102,
930      number =       {C3},
931      pages =        {5733-5752},
932      url      =     {http://mitgcm.org/pdfs/96JC02775.pdf},
933    }
934    
935    @Article{marshall:97b,
936      author =       {Marshall, J. and A. Adcroft and C. Hill and L. Perelman and C. Heisey},
937      title =        {A finite-volume, incompressible Navier Stokes model for
938                      studies of the ocean on parallel computers},
939      journal =      jgr,
940      year =         1997,
941      volume =       102,
942      number =       {C3},
943      pages =        {5753-5766},
944      url      =     {http://mitgcm.org/pdfs/96JC02776.pdf},
945    }
946    
947    @Article{adcroft:97,
948      author =       {Adcroft, A.J. and Hill, C.N. and J. Marshall},
949      title =        {Representation of topography by shaved cells in a height
950                      coordinate ocean model},
951      journal =      mwr,
952      year =         1997,
953      volume =       125,
954      pages =        {2293-2315},
955      url   =        {http://mitgcm.org/pdfs/mwr_1997.pdf},
956      doi       =    {10.1175/1520-0493\%281997\%29125<2293:ROTBSC>2.0.CO;2},
957    }
958    
959    @Article{adcroft:04a,
960      author =       {Adcroft, A. and J.-M. Campin},
961      title =        {Re-scaled height coordinates for accurate representation
962                      of free-surface flows in ocean circulation models},
963      journal =      om,
964      year =         2004,
965      volume =       7,
966      pages =        {269-284},
967      doi   =        {10.1016/j.ocemod.2003.09.003},
968    }
969    
970    @Article{adcroft:04b,
971      author =       {Adcroft, A. and J.-M. Campin and C. Hill and J. Marshall},
972      title =        {Implementation of an Atmosphere-Ocean General Circulation Model
973                      on the Expanded Spherical Cube},
974      journal =      mwr,
975      year =         2004,
976      volume =       132,
977      pages =        {2845-2863},
978      url   =        {http://mitgcm.org/pdfs/mwr_2004.pdf},
979      doi     =      {10.1175/MWR2823.1},
980    }
981    
982    @inproceedings{adcroft:04c,
983      author =       {Adcroft, A. and C. Hill and J.-M. Campin and J. Marshall
984                      and P. Heimbach},
985      title =        {Overview of the Formulation and Numerics of the {MIT}GCM},
986      booktitle =   {Proceedings of the ECMWF seminar series on Numerical Methods,
987                     Recent developments in numerical methods for atmosphere and
988                     ocean modelling},
989      year =         2004,
990      pages =        {139-149},
991      url   =        {http://mitgcm.org/pdfs/ECMWF2004-Adcroft.pdf},
992     publisher =     ecmwf
993    }
994    
995    @Article{marshall:04,
996      author =       {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White},
997      title =        {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms},
998      journal =      mwr,
999      year =         2004,
1000      volume =       132,
1001      pages =        {2882-2894},
1002      url   =        {http://mitgcm.org/pdfs/a_o_iso.pdf},
1003      doi    =       {10.1175/MWR2835.1},
1004    }
1005    
1006    @Article{visbeck:97,
1007      author =       {M. Visbeck and J. Marshall and T. Haine and M. Spall},
1008      title =        {Specification of eddy transfer coefficients in coarse-resolution ocean circulation models},
1009      journal =      jpo,
1010      year =         1997,
1011      volume =       27,
1012      number =       3,
1013      pages =        {381-402}
1014    }
1015    
1016    @Article{shaw:98,
1017      author =       {Shaw; A. Arvind, Cho, K.-C., Hill, C., Johnson, R.P.
1018                      and Marshall, J.},
1019      title =        {A comparison of implicitly parallel multi-threaded and
1020                      data-parallel implementations of an ocean model based
1021                      on the Navier-Stokes equations},
1022      journal =      {J. of Parallel and Distributed Computing},
1023      year =         1998,
1024      volume =       48,
1025      number =       1,
1026      pages =        {1-51}
1027    }
1028    
1029    @Article{mjn:99,
1030      author =       {Marshall, J., Jamous, D and J. Nilsson},
1031      title =        {Reconciling `thermodynamic' and `dynamic' methods of
1032                      computation of water-mass transformation rates},
1033      journal =      {DSR},
1034      year =         1999,
1035      volume =       46,
1036      pages =        {545-572}
1037    }
1038    
1039    @Article{ms:99,
1040      author =       {Marshall, J and F. Schott},
1041      title =        {Open ocean deep convection: observations, models and theory},
1042      journal =      {Rev. Geophys.},
1043      year =         1999,
1044      volume =       37,
1045      number =       1,
1046      pages =        {1-64}
1047    }
1048    
1049    @Article{adcroft:99,
1050      author =       {Adcroft, A., Hill C. and J. Marshall},
1051      title =        {A new treatment of the Coriolis terms in C-grid models
1052                      at both high and low resolutions},
1053      journal =      mwr,
1054      year =         1999,
1055      volume =       127,
1056      pages =        {1928-1936},
1057      url   =        {http://mitgcm.org/pdfs/mwr_1999.pdf},
1058      doi   =        {10.1175/1520-0493\%281999\%29127<1928:ANTOTC>2.0.CO;2},
1059    }
1060    
1061    @InProceedings{hill:99,
1062      author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall},
1063      title =        {A Strategy for Terascale Climate Modeling},
1064      booktitle =    {In Proceedings of the Eighth ECMWF Workshop on the Use of Parallel Processors in Meteorology},
1065      year =         1999,
1066      pages = {406-425},
1067      publisher =    {World Scientific},
1068    }
1069    
1070    @Article{wardle:00,
1071      author =       {Wardle R. and Marshall J.},
1072      title =        {Representation of eddies in primitive equation models by a PV flux},
1073      journal =      jpo,
1074      year =         2000,
1075      volume =       30,
1076      number =       10,
1077      pages =        {2481-2503}
1078    }
1079    
1080    @Article{ac:02,
1081      author =       {Adcroft, A. and J.-M. Campin},
1082      title =        {Comparison of finite volume schemes and direct-space-time
1083                      methods for ocean circulation models},
1084      journal =      om,
1085      year =         2002,
1086      note =         {in preparation}
1087    }
1088    
1089    @Article{adcroft:02,
1090      author =       {Adcroft, A., et~al.},
1091      title =        {Energy conversion in discrete numerical models},
1092      journal =      om,
1093      year =         2002,
1094      note =         {in preparation}
1095    }
1096    
1097    @InCollection{arakawa:77,
1098      author =       {Arakawa, A. and Lamb, V.},
1099      title =        {Computational Design of the Basic Dynamical Processes of
1100                      the UCLA General Circulation Model},
1101      booktitle =    {Methods in Computational Physics},
1102      pages =        {174-267},
1103      publisher =    {Academic Press},
1104      year =         1977,
1105      volume =       17
1106    }
1107    
1108    @Article{miller_white:84,
1109      author =       {Miller, M. J. and White, A. A.},
1110      title =        {On the non-hydrostatic equations in pressure
1111                      and sigma coordiantes},
1112      journal =      qjrms,
1113      year =         1984,
1114      volume =       110,
1115      pages =        {515-533}
1116    }
1117    
1118    @Article{white:89,
1119      author =       {White, A. A.},
1120      title =        {An extended version of a nonhydrostatic, pressure coordiante model},
1121      journal =      qjrms,
1122      year =         1989,
1123      volume =       115,
1124      pages =        {1243-1251}
1125    }
1126    
1127    @Article{adcroft:98,
1128      author =       {Adcroft, A. and Marshall, D.},
1129      title =        {How slippery are piecewise-constant coastlines in numerical
1130                      ocean models?},
1131      journal =      {Tellus},
1132      year =         1998,
1133      volume =       50,
1134      number =       1,
1135      pages =        {95-108}
1136    }
1137    
1138    @PhdThesis{adcroft:95,
1139      author =       {Adcroft, A.},
1140      title =        {Numerical Algorithms for use in a Dynamical Model of the
1141                      Ocean},
1142      school =       {Imperial College, London},
1143      year =         1995
1144    }
1145    
1146    @Article{griffies:00,
1147      author =       {Griffies, S.,M. and Hallberg, R.,W.},
1148      title =        {Biharmonic friction with a {Smagorinsky}-like viscosity for
1149                      use in large-scale eddy-permitting ocean models},
1150      journal =      mwr,
1151      year =         2000,
1152      volume =       128,
1153      number =       8,
1154      pages =        {2935-2946}
1155    }
1156    
1157    @Article{wajsowicz:93,
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1241     series         = {Lectures in Applied Mathematics},
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1243     pages          = {163-193},
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1317      OPTannote =    {}
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1322      title =        "Algorithms for Computation of Fundamental Properties
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1324      institution =  "Unesco",
1325      year =         1983,
1326      type =         "Unesco Technical Papers in Marine Science",
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1333                     and D. A. Rothrock",
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1337      VOLUME      = 28,
1338      PAGES       = "191-217"
1339    }
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1344                     numerical investigations of climate",
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1347      VOLUME      = 6,
1348      PAGES       = "379-389"
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1356      VOLUME      = 17,
1357      PAGES       = "525-531"
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1371      TITLE       = "Modeling pack ice as a cavitating fluid",
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1375      PAGES       = "626-651"
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1381      JOURNAL     = jpo,
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1420                      its Coupling to a Two-Dimensional Atmospheric Model: Uses
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1423      year =         {2005},
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1425      address =      {Cambridge, MA},
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1427    }
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1432                      Biogeochemistry Models},
1433      journal =      {Ocean Modeling},
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1447      OPTkey =       {},
1448      volume =       {18},
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1455      title =        {A global wind stress climatology based on ECMWF analyses},
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1457      year =         {1989},
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1460      number =       {NCAR/TN-338+STR},
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1483     publisher    = {Gordon and Breach, Scientific Publishers}
1484    }
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1489     title        = {A solar radiation model for use in climate studies.},
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1492     pages        = {762-772}
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1512     number       = {104606-Vol 3},
1513     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
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1592     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
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1620     journal      = jpo,
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1630     journal      = mwr,
1631     volume       = {120},
1632     pages        = {978-1002}
1633    }
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1639     booktitle    = {Workshop on Micrometeorology},
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1641     publisher    = {American Meteorological Society}
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1659     volume       = {44},
1660     pages        = {859-876}
1661    }
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1668     journal      = mwr,
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1677    General Circulation Model},
1678     institution  = {National Aeronautics and Space Administration},
1679     type         = {NASA Technical Memorandum},
1680     number       = {104606 Volume 10},
1681     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1682     note         = {http://www.gmao.nasa.gov/},
1683    }
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1689    turbulent fluid flow at high Reynolds and Peclet numbers.  },
1690     journal      = jfm,
1691     volume       = {62},
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1699    atmospheric boundary layer.},
1700     journal      = {Atmos. Environ.},
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1708     title        = {Impact of Orographically Induced Gravity Wave Drag in the GLA GCM},
1709     journal      = qjrms,
1710     volume       = {122},
1711     pages        = {903-927}
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1724     pages          = {391-423}
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1741     journal        = {Climate Dyn.},
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1766      author =       {{Message Passing Interface Forum}},
1767      title =        {{MPI}: A Message-Passing Interface standard (version 2.0)},
1768      institution =  {mpi-forum.org},
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1770    }
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1772    @Article{cam08,
1773      author =       {Jean-Michel Campin and John Marshall and David
1774                      Ferreira},
1775      title =        {Sea-Ice Ocean Coupling Using a Rescaled Vertical
1776                      Coordinate z$^\ast$},
1777      journal =      om,
1778      volume =       24,
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1780      pages =        {1--14},
1781      doi =          {10.1016/j.ocemod.2008.05.005},
1782      year =         2008
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1788      title =        {Large-Scale Sea Ice Drift and Deformation:
1789                      {C}omparison between Models and Observations in the
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1800      title =        {The role of sea ice dynamics in modeling CO{$_2$}
1801                      increases},
1802      booktitle =    {Climate processes and climate sensitivity},
1803      pages =        {238--253},
1804      publisher =    {AGU},
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1809      address =      {Washington, D.C.}
1810    }
1811    
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1814      title =        {A Diagnostic Ice-Ocean Model},
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1817      volume =       17,
1818      number =       7,
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1820    }
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1823      author =       {Hibler, III, William D. and Chi F. Ip},
1824      title =        {The effect of sea ice rheology on {A}rcitc buoy
1825                      drift},
1826      booktitle =    {Ice Mechanics},
1827      pages =        {255--264},
1828      publisher =    {Am. Soc. of Mech. Eng.},
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1830      editor =       {John P. Dempsey and Y. D. S. Rajapakse},
1831      volume =       204,
1832      series =       {AMD},
1833      address =      {New York}
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1835    
1836    @Article{hibler97,
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1838      title =        {On Modeling Sea-Ice Fracture and Flow in Numerical
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1860      title =        {A Growth Model for Black Ice, Snow Ican and Snow
1861                      Thickness in Subarctic Basins},
1862      journal =      {Nordic Hydrology},
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1864      volume =       14,
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1870      title =        {A Global Ocean-Atmosphere Climate Model with Seasonal
1871                      Variation for Future Studies of Climate Sensitivity},
1872      journal =      dao,
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1880                      J.-M. Campin and B. Cheng and B. Ciotti and
1881                      I. Fukumori and A. Koehl and P. Heimbach and
1882                      C. Henze and T. Lee and D. Stammer and J. Taft and
1883                      J. Zhang},
1884      title =        {{NASA} Supercomputer Improves Prospects for Ocean
1885                      Climate Research},
1886      journal =      eos,
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1890      pages =        {89, 95--96}
1891    }
1892    
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1895      title =        "{A Large-Scale Numerical Model of Sea Ice}",
1896      journal =      jgr,
1897      year =         1979,
1898      month =        jan,
1899      volume =       84,
1900      number =       {C1},
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1902      adsurl =       {http://adsabs.harvard.edu/cgi-bin/nph-bib_query?bibcode=1979JGR....84..311P&db_key=PHY},
1903      adsnote =      {Provided by the Smithsonian/NASA Astrophysics Data
1904                      System}
1905    }
1906    
1907    @Article{semtner84,
1908      author =       {Semtner, Jr., Albert J.},
1909      title =        {On Modelling the Seasonal Thermodynamic Cycle of Sea
1910                      Ice in Studies of Climatic Change},
1911      journal =      cch,
1912      year =         1984,
1913      volume =       6,
1914      number =       1,
1915      pages =        {27--37}
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1917    
1918    @Article{zhang97,
1919      author =       {Jinlun Zhang and Hibler, III, William D.},
1920      title =        {On an Efficient Numerical Method for Modeling Sea Ice Dynamics},
1921      journal =      jgr,
1922      year =         1997,
1923      volume =       102,
1924      number =       {C4},
1925      pages =        {8691--8702}
1926    }
1927    
1928    @Article{zhang03,
1929      author =       {Jinlun Zhang and Drew A. Rothrock},
1930      title =        {Modeling Global Sea Ice with a Thickness and
1931                      Enthalpy Distribution Model in Generalized
1932                      Curvilinear Coordinates},
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1934      year =         2003,
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1939    
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1941      author =       {Aike Beckmann and Hartmut H. Hellmer and Ralph
1942                      Timmermann},
1943      title =        {A Numerical Model of the {W}eddell {S}ea:
1944                      Large-Scale Circulation and Water Mass Distribution},
1945      journal =      jgr,
1946      year =         1999,
1947      volume =       104,
1948      number =       {C10},
1949      pages =        {23,375--23,392}
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1951    
1952    @Article{grosfeld97,
1953      author =       {Klaus Grosfeld and R{\"u}diger Gerdes and J{\"u}rgen
1954                      Determann},
1955      title =        {Thermohaline Circulation and Interaction between Ice
1956                      Shelf Cavities and the Adjacent Open Water},
1957      journal =      jgr,
1958      year =         1997,
1959      volume =       102,
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1961      pages =        {15,595--15,610}
1962    }
1963    
1964    @Article{hellmer89,
1965      author =       {Hartmut H. Hellmer and Dirk J. Olbers},
1966      title =        {A Two-Dimensional Model of the Thermohaline
1967                      Circulation Under an Ice Shelf},
1968      journal =      {Antarct. Sci.},
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1970      volume =       1,
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1972    }
1973    
1974    @Article{holland99,
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1976      title =        {Modeling Thermodynamic Ice-Ocean Interactions at the
1977                      Base of an Ice Shelf},
1978      journal =      jpo,
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1980      volume =       29,
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1983    }
1984    
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1988      title =        {The Role of Meltwater Advection in the Formulation
1989                      of Conservative Boundary Conditions at an Ice-Ocean
1990                      Interface},
1991      journal =      jpo,
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2004      title =        {The {NMC/NCAR} 40-Year Reanalysis Project},
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2007      volume =       77,
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2010    
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2013      title =        {On the Convergence of the Modified
2014                      Elastic-Viscous-Plastic Method of Solving for
2015                      Sea-Ice Dynamics},
2016      journal =      {submitted},
2017      year =         {2015},
2018      OPTkey =       {},
2019      OPTvolume =    {},
2020      OPTnumber =    {},
2021      OPTpages =     {},
2022      OPTmonth =     {},
2023      OPTnote =      {},
2024      OPTannote =    {}
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2026    
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2028      author =       {Klymak, Jody M. and Sonya M. Legg},
2029      title =        {A simple mixing scheme for models that resolve
2030                      breaking internal waves},
2031      journal =      om,
2032      year =         2010,
2033      volume =       33,
2034      pages =        {224--234},
2035      doi =          {10.1016/j.ocemod.2010.02.005}
2036    }
2037    
2038    @Article{losch08,
2039      author =       {Martin Losch},
2040      title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean
2041                      General Circulation Model},
2042      journal =      jgr,
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2044      volume =       113,
2045      number =       {C08043},
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2047    }
2048    
2049    @Article{losch10:_mitsim,
2050      author =       {Losch, Martin and Menemenlis, Dimitris and Campin,
2051                      Jean-Michel and Heimbach, Patrick and Hill, Chris},
2052      title =        {On the formulation of sea-ice models. {P}art 1:
2053                      Effects of different solver implementations and
2054                      parameterizations},
2055      journal =      om,
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