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revision 1.1 by heimbach, Thu Oct 4 19:27:24 2001 UTC revision 1.41 by mlosch, Fri Feb 25 17:25:13 2011 UTC
# Line 1  Line 1 
1    @string{angl    = {Ann.\ Glaciol.}}
2  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}
3  @string{bams    = {Bull.~Am.~Met.~Soc.}}  @string{bams    = {Bull.~Am.~Met.~Soc.}}
4  @string{blm     = {Bound.~Layer~Meteorol.}}  @string{blm     = {Bound.~Layer~Meteorol.}}
5    @string{climd   = {Clim.~Dynamics}}
6    @string{cch     = {Clim.\ Change}}
7  @string{jgr     = {J.~Geophys.~Res.}}  @string{jgr     = {J.~Geophys.~Res.}}
8  @string{ijrs    = {Int.~J.~Remote Sensing}}  @string{ijrs    = {Int.~J.~Remote Sensing}}
9  @string{jas     = {J.~Atmos.~Sci.}}  @string{jas     = {J.~Atmos.~Sci.}}
10    @string{jam     = {J.~Appl.~Meteor.}}
11  @string{jpo     = {J.~Phys.~Oceanogr.}}  @string{jpo     = {J.~Phys.~Oceanogr.}}
12  @string{jclim   = {J.~Clim.}}  @string{jclim   = {J.~Clim.}}
13    @string{jcp     = {J.~Comput.~Phys.}}
14  @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}  @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}
15  @string{jfm     = {J.~Fluid Mech.}}  @string{jfm     = {J.~Fluid Mech.}}
16  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}
17  @string{jms     = {J.~Mar.~Sys.}}  @string{jms     = {J.~Mar.~Sys.}}
18    @string{om      = {Ocean Modelling}}
19  @string{gaos    = {Global Atmos.~Ocean System}}  @string{gaos    = {Global Atmos.~Ocean System}}
20  @string{grl     = {Geophys.~Res.~Lett.}}  @string{grl     = {Geophys.~Res.~Lett.}}
21  @string{dsr     = {Deep Sea Res.}}  @string{dsr     = {Deep Sea Res.}}
# Line 28  Line 34 
34  @string{estec   = {European Space Research and Technology Centre  @string{estec   = {European Space Research and Technology Centre
35                          (ESTEC)}}                          (ESTEC)}}
36  @string{esa     = {European Space Agency (ESA)}}  @string{esa     = {European Space Agency (ESA)}}
37    @string{eos     = {Eos~Trans.\ AGU}}
38    
39  @Article{bis-eta:92,  @Article{bis-eta:92,
40   author         = {C.H. Bishof and G.F. Corliss and L. Green and   author         = {C.H. Bishof and G.F. Corliss and L. Green and
# Line 67  Line 74 
74                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
75   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
76                    }                    }
77    
78    @ARTICLE{bugi-hill:06,
79      author = {V. Bugnion and C. Hill},
80      title = {Equilibration mechanisms in an adjoint ocean general
81               circulation model},
82      journal = {Ocean Dynamics},
83      year = {2006},
84      volume = {56},
85      number = {1},
86      pages = {51-61},
87      doi   = {10.1007/s10236-005-0052-z},
88    }
89    
90  @techreport{bis-roh:97,  @techreport{bis-roh:97,
91   author         = {C. Bishof and L. Roh},   author         = {C. Bishof and L. Roh},
# Line 114  Line 133 
133   volume         = {120},   volume         = {120},
134   pages          = {1367--1387},   pages          = {1367--1387},
135                    }                    }
136    
137    @ARTICLE{durr:91,
138      author = {Dale R. Durran},
139      title = {The Third-Order Adams-Bashforth Method: An Attractive Alternative
140               to Leapfrog Time Differencing},
141      journal = mwr,
142      year = {1991},
143      volume = {119},
144      pages  = {702-720},
145    }
146    
147    
148    @ARTICLE{dutk-etal:06,
149      author = {S. Dutkiewicz and M.J. Follows and P. Heimbach and J. Marshall},
150      title = {Controls on ocean productivity and air-sea carbon flux:
151               An adjoint model sensitivity study},
152      journal = grl,
153      year = {2006},
154      volume = {33},
155      pages  = {L02603},
156      doi    = {10.1029/2005GL024987},
157    }
158    
159  @Article{err:97,  @Article{err:97,
160   author         = {R.M. Errico},   author         = {R.M. Errico},
# Line 175  Line 216 
216   note           = {in press},   note           = {in press},
217                    }                    }
218    
219    @Article{fer-eta:05,
220     author         = {D. Ferreira and J. Marshall and P. Heimbach},
221     year           = 2005,
222     title          = {Estimating Eddy Stresses by Fitting Dynamics to Observations
223                       using a Residual-Mean Ocean Circulation Model and Its Adjoint},
224     journal        = jpo,
225     volume         = {35},
226     pages          = {1891--1910},
227                      }
228    
229    @Article{gas-eta:90,
230     author         = {P. Gaspar and Y. Gr\'egoris and J.-M. Lefevre},
231     year           = 1990,
232     title          = {A Simple Eddy Kinetic Energy Model for Simulations of the
233                       Oceanic Vertical Mixing: Tests at Station Papa and Long-Term
234                       Upper Ocean Study Site},
235     journal        = jgr,
236     volume         = {95 (C9)},
237     pages          = {16,179--16,193},
238                      }
239    
240  @Article{gen-mcw:90,  @Article{gen-mcw:90,
241   author         = {P.R. Gent and J.C. McWilliams},   author         = {P.R. Gent and J.C. McWilliams},
242   year           = 1990,   year           = 1990,
# Line 250  Line 312 
312   pages          = {401 pp.},   pages          = {401 pp.},
313                    }                    }
314                                                                        
315    @incollection{gri:89,
316     author         = {A. Griewank},
317     year           = 1989,
318     title          = {On automatic differentiation},
319     booktitle      = {Mathematical Programming: Recent Developments and
320                      Applications},
321     pages          = {83--108},
322     editor         = {M. Iri and K. Tanabe},
323     publisher      = {Kluwer},
324     address        = {Dordrecht, NL},
325                      }
326    
327    @Article{gri:92,
328      author =       {A.~Griewank},
329      title =        {Achieving logarithmic growth of temporal and spatial
330      complexity in reverse {A}utomatic {D}ifferentiation},
331      journal       = {Optimization Methods and Software},
332      year          = {1992},
333      volume        = {1},
334      pages         = {35--54}
335    }
336    
337  @book{gri:00,  @book{gri:00,
338   author         = {A. Griewank},   author         = {A. Griewank},
339   title          = {Evaluating Derivatives. Principles and Techniques   title          = {Evaluating Derivatives. Principles and Techniques
# Line 271  Line 355 
355   volume         = {39},   volume         = {39},
356   pages          = {2038--3050},   pages          = {2038--3050},
357                    }                    }
358    
359    @Article{Haney,
360      author =       {R.L. Haney},
361      title =        {Surface thermal boundary conditions for ocean
362                      circulation models},
363      journal =      jpo,
364      year =         1971,
365      volume =       1,
366      pages =        {241--248}
367    }
368    
369    @Article{held-suar:94,
370     author         = {I.M. Held and M.J. Suarez},
371     year           = {1994},
372     title          = {A proposal for the intercomparison of the dynamical cores of atmospheric general circulation models},
373     journal        = {Bulletin of the American Meteorological Society},
374     volume         = {75(10)},
375     pages          = {1825-1830}
376    }
377    
378  @Article{hil-eta:01,  @Article{hil-eta:01,
379   author         = {C. Hill and M. Follows and V. Bugnion and   author         = {C. Hill and M. Follows and V. Bugnion and
380                    J. Marshall},                    J. Marshall},
381   year           = {2001},   year           = {2002},
382   title          = {Spatial and Temporal Impacts of ocean general   title          = {Spatial and Temporal Impacts of ocean general
383                    circulation on carbon sequestration},                    circulation on carbon sequestration},
384   journal        = {journal ???},   journal        = {Global Biogeochemical Cycles},
385   note           = {submitted},   note           = {submitted},
386                    }                    }
387    
388    @ARTICLE{hib80,
389      author =       {Hibler, III, William D.},
390      TITLE       = "Modeling a Variable Thickness Sea Ice Cover",
391      JOURNAL     = mwr,
392      YEAR        = 1980,
393      VOLUME      = 1,
394      PAGES       = "1943-1973"
395    }
396    
397    @Article{Holland75,
398     author         = {W.R. Holland and L. B. Lin},
399     year           = {1975a},
400     title          = {On the origin of mesoscale eddies and their contribution
401                       to the general circulation of the ocean. I. A preliminary
402                       numerical experiment},
403     journal        = jpo,
404     volume         = {5},
405     pages          = {642-657}
406                      }
407    
408    @Article{hol-lin:75b,
409     author         = {W.R. Holland and L. B. Lin},
410     year           = {1975b},
411     title          = {On the origin of mesoscale eddies and their contribution
412                       to the general circulation of the ocean. II. A parameter
413                       study},
414     journal        = jpo,
415     volume         = {5},
416     pages          = {658-669}
417                      }
418    
419    @Article{jam-oze:86,
420     author         = {B.M. Jamart and J. Ozer},
421     year           = {1986},
422     title          = {Numerical boundary layers and spurious residual flows},
423     journal        = jgr,
424     volume         = {91},
425     pages          = {10,621-10,631}
426                      }
427    
428  @book{kas-eta:00,  @book{kas-eta:00,
429   author         = {P. Kasibhatla and M. Heimann and P. Rayner and   author         = {P. Kasibhatla and M. Heimann and P. Rayner and
430                    N. Mahowald and R.G. Prinn and D.E. Hartley},                    N. Mahowald and R.G. Prinn and D.E. Hartley},
# Line 326  Line 469 
469   volume         = {38A},   volume         = {38A},
470   pages          = {97--110},   pages          = {97--110},
471                    }                    }
472    
473    @TechReport{lev:94a,
474      author =       {S. Levitus and T.P.Boyer},
475      title =        {{World Ocean Atlas 1994 Volume 3: Salinity}},
476      institution =  {NOAA Atlas NESDIS 3},
477      year =         1994,
478      OPTkey =       {},
479      OPTtype =      {},
480      OPTnumber =    {},
481      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
482      OPTmonth =     {},
483      OPTnote =      {},
484      OPTannote =    {}
485    }
486    
487    
488    @TechReport{Levitus94,
489      author =       {S. Levitus and T.P.Boyer},
490      title =        {{World Ocean Atlas 1994 Volume 4: Temperature}},
491      institution =  {NOAA Atlas NESDIS 4},
492      year =         1994,
493      OPTkey =       {},
494      OPTtype =      {},
495      OPTnumber =    {},
496      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
497      OPTmonth =     {},
498      OPTnote =      {},
499      OPTannote =    {}
500    }
501    
502    
503  @Article{lew-der:85,  @Article{lew-der:85,
504   author         = {J. Lewis and J. Derber},   author         = {J. Lewis and J. Derber},
# Line 348  Line 521 
521   pages          = {38 pp.},   pages          = {38 pp.},
522   address        = {Delft (NL)},   address        = {Delft (NL)},
523                    }                    }
524    
525    @ARTICLE{losc-heim:06,
526      author = {M. Losch and P. Heimbach},
527      title = {Adjoint sensitivity of an ocean general circulation model
528               to bottom topography},
529      journal = jpo,
530      year = {2006},
531      volume = {{in press}},
532      url    = {http://mitgcm.org/pdfs/Los2006a.pdf},
533    }
534    
535    
536  @Article{maro-wun:93,  @Article{maro-wun:93,
537   author         = {J. Marotzke and C. Wunsch},   author         = {J. Marotzke and C. Wunsch},
# Line 394  Line 578 
578   pages          = {5,753--5,766},   pages          = {5,753--5,766},
579                    }                    }
580    
581  @Article{mars-sha:98,  @Article{mars-eta:98,
582   author         = {J. Marshall and H. Jones and C. Hill},   author         = {J. Marshall and H. Jones and C. Hill},
583   year           = 1998,   year           = 1998,
584   title          = {Efficient ocean modeling using   title          = {Efficient ocean modeling using
# Line 402  Line 586 
586   journal        = jms,   journal        = jms,
587   volume         = {18},   volume         = {18},
588   pages          = {115--134},   pages          = {115--134},
589     url            = {http://mitgcm.org/pdfs/journal_of_marine_systems_1998.pdf},
590     doi            = {10.1016/S0924-7963\%2898\%2900008-6},
591                    }                    }
592    
593  @Article{mcw:96,  @Article{mol:09,
594   author         = {J. McWilliams},   author         = {Andrea Molod},
595   year           = 1996,   year           = 2009,
596   title          = {Modeling the oceanic general circulation},   title          = {Running {GCM} physics and dynamics on different grids:
597   journal        = arfm,                     algorithm and tests},
598   volume         = {28},   journal        = tel,
599   pages          = {215--248},   volume         = {61A},
600     pages          = {381--393},
601                    }                    }
602    
603    %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
604    %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.
605    %% (Available from Unidata or in PostScript form by anonymous FTP from
606    %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also
607    %%   a hypertext version of the User's Guide available at
608    %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's
609    %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are
610    %%   also available.
611      
612    @incollection{naum-etal:06,
613            Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},
614            Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},
615            Editor = {{P. Wesseling, E. O~nate and J. Periaux}},
616            Pages = {~},
617            Publisher = {TU Delft},
618            Title = {Adjoint code by source transformation with OpenAD/F},
619            Year = {2006}}
620    
621    @Article{orl:76,
622     author         = {I. Orlanski},
623     year           = 1976,
624     title          = {A simple boundary condition for unbounded hyperbolic flows},
625     journal        = jcp,
626     volume         = {21},
627     pages          = {251--269},
628                    }
629    
630    @Article{pal-rom:97,
631     author         = {T. Paluszkiewicz and R.D. Romea},
632     year           = 1997,
633     title          = {A one-dimensional model for the parameterization
634                      of deep convection in the ocean},
635     journal        = dao,
636     volume         = {26},
637     pages          = {95--130},
638                      }
639    
640    @TechReport{rew:97,
641      author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
642      title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},
643                      An Interface for Data Access, Version 3},
644      institution =  {Unidata Program Center},
645      type =         {Report},
646      address =      {Boulder, Colorado},
647      year =         1997,
648      note =         {http://www.unidata.ucar.edu/packages/netcdf/},
649    }
650    
651    
652  @Article{res-eta:98,  @Article{res-eta:98,
653   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},
654   year           = 1998,   year           = 1998,
655   title          = {Circumvening storage limitations in variational   title          = {Circumventing storage limitations in variational
656                    data assimilation studies},                    data assimilation studies},
657   journal        = {SIAM J. Sci. Comput.},   journal        = {SIAM J. Sci. Comput.},
658   volume         = {19},   volume         = {19},
# Line 446  Line 682 
682   publisher      = {Springer-Verlag},   publisher      = {Springer-Verlag},
683   address        = {Berlin (Germany)},   address        = {Berlin (Germany)},
684                    }                    }
685    
686    @article{utke-etal:08,
687            Author = {J. Utke and U. Naumann and M. Fagan and N. Tallent and M. Strout and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch},
688            Date-Modified = {2007-11-19 10:15:08 -0500},
689            Journal = {{ACM} Transactions on Mathematical Software},
690            Pages = {~},
691            Title = {OpenAD/F: A modular open source tool for automatic differentiation of Fortran codes},
692            Volume = {34(4)},
693            Year = {2008}}
694    
695    @Article{DaSilva94,
696     author         = {A. da Silva and A. C. Young and S. Levitus},
697     year           = 1994,
698     title          = {Atlas of Surface Marine Data 1994, Volume 1: Algorithms and Procedures},
699     journal        = {NOAA Atlas NESDIS},
700     volume         = {6},
701     publisher      = {U.S. Department of Commerce},
702     address        = {Washington, D.C. (USA)},
703     note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
704     url            = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
705                      }
706    
707  @techreport{sta-eta:97,  @techreport{stam-etal:97,
708   author         = {D. Stammer and C. Wunsch and R. Giering and   author         = {D. Stammer and C. Wunsch and R. Giering and
709                    Q. Zhang and J. Marotzke an J. Marshall and                    Q. Zhang and J. Marotzke and J. Marshall and
710                    C. Hill},                    C. Hill},
711   year           = 1997,   year           = 1997,
712   title          = {The global ocean circulation estimated from   title          = {The global ocean circulation estimated from
# Line 463  Line 720 
720   address        = {Cambridge (MA), USA},   address        = {Cambridge (MA), USA},
721                    }                    }
722    
723  @Article{sta-eta:01,  @ARTICLE{stam-etal:02,
724   author         = {D. Stammer and C. Wunsch and R. Giering and    author = {D. Stammer and C. Wunsch and R. Giering and C. Eckert and P. Heimbach and J. Marotzke and A. Adcroft and C.N. Hill and J. Marshall},
725                    C. Eckert and P. Heimbach and J. Marotzke and    title = {The global ocean circulation and transports during 1992 -- 1997, estimated from ocean observations and a general circulation model.},
726                    A. Adcroft and C. Hill and J. Marshall},    journal = jgr,
727   year           = 2001,    year = {2002a},
728   title          = {The global ocean circulation during 1992 -- 1997,    volume = {107(C9)},
729                    estimated from ocean observations and a general    pages = {3118},
730                    circulation model},    doi   = {10.1029/2001JC000888},
731   journal        = jgr,  }
732   note           = {submitted},  
733    
734    @Article{Stommel66,
735     author         = {H. Stommel},
736     year           = 1948,
737     title          = {The western intensification of wind-driven ocean currents},
738     journal        = {Trans. Am. Geophys. Union},
739     volume         = {29},
740     pages          = {206},
741                    }                    }
742    
743  @Article{tal-cou:87,  @Article{tal-cou:87,
# Line 606  Line 871 
871   volume         = {57},   volume         = {57},
872   pages          = {305--334},   pages          = {305--334},
873                    }                    }
874    
875    
876    @InCollection{hill:95,
877      author =       {Hill, C. and J. Marshall},
878      title =        {Application of a Parallel Navier-Stokes Model to
879                      Ocean Circulation in Parallel Computational Fluid
880                      Dynamics},
881      booktitle =    {Implementations and Results Using Parallel
882                      Computers},
883      pages =        {545-552},
884      publisher =    {Elsevier Science B.V.: New York},
885      year =         1995,
886      editor =       {A. Ecer, J. Periaux, N. Satofuka and S. Taylor}
887    }
888    
889    
890    @Article{marshall:97a,
891      author =       {Marshall, J. and C. Hill and L. Perelman and A. Adcroft},
892      title =        {Hydrostatic, quasi-hydrostatic, and nonhydrostatic ocean
893                     modeling},
894      journal =      jgr,
895      year =         1997,
896      volume =       102,
897      number =       {C3},
898      pages =        {5733-5752},
899      url      =     {http://mitgcm.org/pdfs/96JC02775.pdf},
900    }
901    
902    @Article{marshall:97b,
903      author =       {Marshall, J. and A. Adcroft and C. Hill and L. Perelman and C. Heisey},
904      title =        {A finite-volume, incompressible Navier Stokes model for
905                      studies of the ocean on parallel computers},
906      journal =      jgr,
907      year =         1997,
908      volume =       102,
909      number =       {C3},
910      pages =        {5753-5766},
911      url      =     {http://mitgcm.org/pdfs/96JC02776.pdf},
912    }
913    
914    @Article{adcroft:97,
915      author =       {Adcroft, A.J. and Hill, C.N. and J. Marshall},
916      title =        {Representation of topography by shaved cells in a height
917                      coordinate ocean model},
918      journal =      mwr,
919      year =         1997,
920      volume =       125,
921      pages =        {2293-2315},
922      url   =        {http://mitgcm.org/pdfs/mwr_1997.pdf},
923      doi       =    {10.1175/1520-0493\%281997\%29125<2293:ROTBSC>2.0.CO;2},
924    }
925    
926    @Article{adcroft:04a,
927      author =       {Adcroft, A. and J.-M. Campin},
928      title =        {Re-scaled height coordinates for accurate representation
929                      of free-surface flows in ocean circulation models},
930      journal =      om,
931      year =         2004,
932      volume =       7,
933      pages =        {269-284},
934      doi   =        {10.1016/j.ocemod.2003.09.003},
935    }
936    
937    @Article{adcroft:04b,
938      author =       {Adcroft, A. and J.-M. Campin and C. Hill and J. Marshall},
939      title =        {Implementation of an Atmosphere-Ocean General Circulation Model
940                      on the Expanded Spherical Cube},
941      journal =      mwr,
942      year =         2004,
943      volume =       132,
944      pages =        {2845-2863},
945      url   =        {http://mitgcm.org/pdfs/mwr_2004.pdf},
946      doi     =      {10.1175/MWR2823.1},
947    }
948    
949    @inproceedings{adcroft:04c,
950      author =       {Adcroft, A. and C. Hill and J.-M. Campin and J. Marshall
951                      and P. Heimbach},
952      title =        {Overview of the Formulation and Numerics of the {MIT}GCM},
953      booktitle =   {Proceedings of the ECMWF seminar series on Numerical Methods,
954                     Recent developments in numerical methods for atmosphere and
955                     ocean modelling},
956      year =         2004,
957      pages =        {139-149},
958      url   =        {http://mitgcm.org/pdfs/ECMWF2004-Adcroft.pdf},
959     publisher =     ecmwf
960    }
961    
962    @Article{marshall:04,
963      author =       {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White},
964      title =        {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms},
965      journal =      mwr,
966      year =         2004,
967      volume =       132,
968      pages =        {2882-2894},
969      url   =        {http://mitgcm.org/pdfs/a_o_iso.pdf},
970      doi    =       {10.1175/MWR2835.1},
971    }
972    
973    @Article{visbeck:97,
974      author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall},
975      title =        {Specification of eddy transfer coefficients in
976                      coarse-resolution ocean circulation models},
977      journal =      jpo,
978      year =         1997,
979      volume =       27,
980      number =       3,
981      pages =        {381-402}
982    }
983    
984    @Article{shaw:98,
985      author =       {Shaw; A. Arvind, Cho, K.-C., Hill, C., Johnson, R.P.
986                      and Marshall, J.},
987      title =        {A comparison of implicitly parallel multi-threaded and
988                      data-parallel implementations of an ocean model based
989                      on the Navier-Stokes equations},
990      journal =      {J. of Parallel and Distributed Computing},
991      year =         1998,
992      volume =       48,
993      number =       1,
994      pages =        {1-51}
995    }
996    
997    @Article{mjn:99,
998      author =       {Marshall, J., Jamous, D and J. Nilsson},
999      title =        {Reconciling `thermodynamic' and `dynamic' methods of
1000                      computation of water-mass transformation rates},
1001      journal =      {DSR},
1002      year =         1999,
1003      volume =       46,
1004      pages =        {545-572}
1005    }
1006    
1007    @Article{ms:99,
1008      author =       {Marshall, J and F. Schott},
1009      title =        {Open ocean deep convection: observations, models and theory},
1010      journal =      {Rev. Geophys.},
1011      year =         1999,
1012      volume =       37,
1013      number =       1,
1014      pages =        {1-64}
1015    }
1016    
1017    @Article{adcroft:99,
1018      author =       {Adcroft, A., Hill C. and J. Marshall},
1019      title =        {A new treatment of the Coriolis terms in C-grid models
1020                      at both high and low resolutions},
1021      journal =      mwr,
1022      year =         1999,
1023      volume =       127,
1024      pages =        {1928-1936},
1025      url   =        {http://mitgcm.org/pdfs/mwr_1999.pdf},
1026      doi   =        {10.1175/1520-0493\%281999\%29127<1928:ANTOTC>2.0.CO;2},
1027    }
1028    
1029    @InProceedings{hill:99,
1030      author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall},
1031      title =        {A Strategy for Terascale Climate Modeling},
1032      booktitle =    {In Proceedings of the Eighth ECMWF Workshop on the Use of Parallel Processors in Meteorology},
1033      year =         1999,
1034      pages = {406-425},
1035      publisher =    {World Scientific},
1036    }
1037    
1038    @Article{wardle:00,
1039      author =       {Wardle R. and Marshall J.},
1040      title =        {Representation of eddies in primitive equation models by a PV flux},
1041      journal =      jpo,
1042      year =         2000,
1043      volume =       30,
1044      number =       10,
1045      pages =        {2481-2503}
1046    }
1047    
1048    @Article{ac:02,
1049      author =       {Adcroft, A. and J.-M. Campin},
1050      title =        {Comparison of finite volume schemes and direct-space-time
1051                      methods for ocean circulation models},
1052      journal =      om,
1053      year =         2002,
1054      note =         {in preparation}
1055    }
1056    
1057    @Article{adcroft:02,
1058      author =       {Adcroft, A., et~al.},
1059      title =        {Energy conversion in discrete numerical models},
1060      journal =      om,
1061      year =         2002,
1062      note =         {in preparation}
1063    }
1064    
1065    @InCollection{arakawa:77,
1066      author =       {Arakawa, A. and Lamb, V.},
1067      title =        {Computational Design of the Basic Dynamical Processes of
1068                      the UCLA General Circulation Model},
1069      booktitle =    {Methods in Computational Physics},
1070      pages =        {174-267},
1071      publisher =    {Academic Press},
1072      year =         1977,
1073      volume =       17
1074    }
1075    
1076    @Article{miller_white:84,
1077      author =       {Miller, M. J. and White, A. A.},
1078      title =        {On the non-hydrostatic equations in pressure
1079                      and sigma coordiantes},
1080      journal =      qjrms,
1081      year =         1984,
1082      volume =       110,
1083      pages =        {515-533}
1084    }
1085    
1086    @Article{white:89,
1087      author =       {White, A. A.},
1088      title =        {An extended version of a nonhydrostatic, pressure coordiante model},
1089      journal =      qjrms,
1090      year =         1989,
1091      volume =       115,
1092      pages =        {1243-1251}
1093    }
1094    
1095    @Article{adcroft:98,
1096      author =       {Adcroft, A. and Marshall, D.},
1097      title =        {How slippery are piecewise-constant coastlines in numerical
1098                      ocean models?},
1099      journal =      {Tellus},
1100      year =         1998,
1101      volume =       50,
1102      number =       1,
1103      pages =        {95-108}
1104    }
1105    
1106    @PhdThesis{adcroft:95,
1107      author =       {Adcroft, A.},
1108      title =        {Numerical Algorithms for use in a Dynamical Model of the
1109                      Ocean},
1110      school =       {Imperial College, London},
1111      year =         1995
1112    }
1113    
1114    @Article{griffies:00,
1115      author =       {Griffies, S.,M. and Hallberg, R.,W.},
1116      title =        {Biharmonic friction with a Smagorinsky-like viscosity for
1117                      use in large-scale eddy-permitting ocean models},
1118      journal =      mwr,
1119      year =         2000,
1120      volume =       128,
1121      number =       8,
1122      pages =        {2935-2946}
1123    }
1124    
1125    @Article{wajsowicz:93,
1126      author =       {Wajsowicz, R.},
1127      title =        {A CONSISTENT FORMULATION OF THE ANISOTROPIC STRESS TENSOR
1128                      FOR USE IN MODELS OF THE LARGE-SCALE OCEAN CIRCULATION},
1129      journal =      jcp,
1130      year =         1993,
1131      volume =       105,
1132      number =       2,
1133      pages =        {333-338}
1134    }
1135    
1136    @Article{campin:02,
1137      author =       {Campin, J.-M. and A. Adcroft and C. Hill and J. Marshall},
1138      title =        {Conservation of properties in a free-surface model},
1139      journal =      om,
1140      year =         2004,
1141      volume =       6,
1142      pages =        {221-244}
1143    }
1144    
1145    @Article{dm:95,
1146      author =       {Danabasoglu, G. and McWilliams J.C.},
1147      title =        {Sensitivity of the global ocean circulation to parameterizations of mesoscale tracer transports},
1148      journal =      jclim,
1149      year =         1995,
1150      volume =       8,
1151      number =       12,
1152      pages =        {2967-2987}
1153    }
1154    
1155    @Article{ldd:97,
1156      author =       {Large, W.G. and Danabasoglu, G. and Doney, S.C. and McWilliams, J.C.},
1157      title =        {Sensitivity to surface forcing and boundary layer mixing in a global ocean model: Annual-mean climatology},
1158      journal =      jpo,
1159      year =         1997,
1160      volume =       27,
1161      number =       11,
1162      pages =        {2418-2447}
1163    }
1164    
1165    @Article{gkw:99,
1166      author =       {Gerdes R. and Koberle C. and Beckmann A. and Herrmann P. and Willebrand J.},
1167      title =        {Mechanisms for spreading of Mediterranean water in
1168                      coarse-resolution numerical models},
1169      journal =      jpo,
1170      year =         1999,
1171      volume =       29,
1172      number =       8,
1173      pages =        {1682-1700}
1174    }
1175    
1176    @incollection{roe:85,
1177     author         = {P.L. Roe},
1178     year           = 1985,
1179     title          = {Some contributions to the modelling of discontinuous flows},
1180     booktitle      = {Large-Scale Computations in Fluid Mechanics},
1181     series         = {Lectures in Applied Mathematics},
1182     volume         = 22,
1183     pages          = {163-193},
1184     editor         = {B.E. Engquist and S. Osher and R.C.J. Somerville},
1185     publisher      = {American Mathematical Society},
1186     address        = {Providence, RI},
1187    }
1188    
1189    @Article{trenberth90,
1190      author =       {K. M. Trenberth and J. Olson and W. G. Large},
1191      title =        {The Mean Annual Cycle in {G}lobal {O}cean Wind
1192                      Stress},
1193      journal =      jpo,
1194      year =         1990,
1195      volume =       20,
1196      pages =        {1742--1760}
1197    }
1198    
1199    @Article{molteni:03,
1200      author =       {F. Molteni},
1201      title =        {Atmospheric simulations using a {GCM} with simplified physical
1202                      parametrization, {I}: Model climatology and variability in
1203                      multidecadal experiments},
1204      journal =      climd,
1205      year =         2003,
1206      volume =       20,
1207      pages =        {175--191}
1208    }
1209    
1210    @Article{jiang99,
1211      author =       {S. Jiang and P. H. Stone and P. Malanotte-Rizzoli},
1212      title =        {An Assessment of the {G}eophysical {F}luid
1213                      {D}ynamics {L}aboratory Ocean Model with Coarse
1214                      Resolution: Annual-Mean Climatology},
1215      journal =      jgr,
1216      year =         1999,
1217      volume =       104,
1218      number =       {C11},
1219      pages =        {25,623--25,645}
1220    }
1221    
1222    @Article{szoeke02,
1223      author =       {de Szoeke, Roland A. and Roger M. Samelson},
1224      title =        {The Duality between the {B}oussinesq and
1225                      {N}on-{B}oussinesq Hydrostatic Equations of Motion},
1226      journal =      jpo,
1227      year =         2002,
1228      volume =       32,
1229      number =       8,
1230      pages =        {2194--2203}
1231    }
1232    
1233    @Article{jackett95,
1234      author =       {David R. Jackett and Trevor J. McDougall},
1235      title =        {Minimal Adjustment of Hydrographic Profiles to
1236                      Achieve Static Stability},
1237      journal =      jaot,
1238      year =         1995,
1239      volume =       12,
1240      number =       4,
1241      pages =        {381--389}
1242    }
1243    
1244    @Article{mcdougall03,
1245      author =       {Trevor J. McDougall and David R. Jackett and Daniel
1246                      G. Wright and Rainer Feistel},
1247      title =        {Accurate and Computationally Efficient Algorithms
1248                      for Potential Temperature and Density of Seawater},
1249      journal =      jaot,
1250      year =         {2003},
1251      OPTkey =       {},
1252      OPTvolume =    {},
1253      OPTnumber =    {},
1254      OPTpages =     {},
1255      OPTmonth =     {},
1256      OPTnote =      {{\textup{In press}}},
1257      OPTannote =    {}
1258    }
1259    
1260    @TechReport{fofonoff83,
1261      author =       "Fofonoff, P. and Millard, Jr., R.C.",
1262      title =        "Algorithms for Computation of Fundamental Properties
1263                      of Seawater",
1264      institution =  "Unesco",
1265      year =         1983,
1266      type =         "Unesco Technical Papers in Marine Science",
1267      number =       44,
1268      pages =        {53 pp.}
1269    }
1270    
1271    @ARTICLE{zha98a,
1272      AUTHOR      = "J. Zhang and Hibler, III, W. D. and M. Steele
1273                     and D. A. Rothrock",
1274      TITLE       = "Arctic ice-ocean modeling with and without climate restoring",
1275      JOURNAL     = jpo,
1276      YEAR        = 1998,
1277      VOLUME      = 28,
1278      PAGES       = "191-217"
1279    }
1280    
1281    @ARTICLE{sem76,
1282      AUTHOR      = "Semtner, Jr., Albert J.",
1283      TITLE       = "A model for the thermodynamic growth of sea ice in
1284                     numerical investigations of climate",
1285      JOURNAL     = jpo,
1286      YEAR        = 1976,
1287      VOLUME      = 6,
1288      PAGES       = "379-389"
1289    }
1290    
1291    @ARTICLE{win00,
1292      AUTHOR      = "M. Winton",
1293      TITLE       = "A reformulated three-layer sea ice model",
1294      JOURNAL     = jaot,
1295      YEAR        = 2000,
1296      VOLUME      = 17,
1297      PAGES       = "525-531"
1298    }
1299    
1300    @ARTICLE{hib79,
1301      author =       {Hibler, III, W. D.},
1302      TITLE       = "A Dynamic Thermodynamic Sea Ice Model",
1303      JOURNAL     = jpo,
1304      YEAR        = 1979,
1305      VOLUME      = 9,
1306      PAGES       = "815-846"
1307    }
1308    
1309    @ARTICLE{fla92,
1310      AUTHOR      = "G. M. Flato and Hibler, III, W. D.",
1311      TITLE       = "Modeling pack ice as a cavitating fluid",
1312      JOURNAL     = jpo,
1313      YEAR        = 1992,
1314      VOLUME      = 22,
1315      PAGES       = "626-651"
1316    }
1317    
1318    @ARTICLE{hun97,
1319      AUTHOR      = "E. C. Hunke and J. K. Dukowicz",
1320      TITLE       = "An elastic-viscous-plastic model for sea ice dynamics",
1321      JOURNAL     = jpo,
1322      YEAR        = 1997,
1323      VOLUME      = 27,
1324      PAGES       = "1849-1867"
1325    }
1326    
1327    @ARTICLE{zha00,
1328      AUTHOR      = "Jinlun Zhang and Drew Rothrock",
1329      TITLE       = "Modeling Arctic Sea Ice with an Efficient Plastic Solution",
1330      JOURNAL     = jgr,
1331      YEAR        = 2000,
1332      VOLUME      = 105,
1333      PAGES       = "3325-3338"
1334    }
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1336    @Article{Shapiro_70,
1337      author =       {Shapiro, R.},
1338      title =        {Smoothing, filtering, and boundary effects},
1339      journal =      {Reviews of Geophysics and Space Physics},
1340      year =         {1970},
1341      volume =       {8},
1342      number =       {2},
1343      pages =        {359--387},
1344    }
1345    
1346    @TechReport{Dutkiewicz_etal_05,
1347      author =       {S. Dutkiewicz and A. Sokolov and J. Scott and P. Stone},
1348      title =        {A Three-Dimensional Ocean-Seaice-Carbon Cycle Model and
1349                      its Coupling to a Two-Dimensional Atmospheric Model: Uses
1350                      in Climate Change Studies, Report 122},
1351      institution =  {MIT Joint Program of the Science and Policy of Global Change},
1352      year =         {2005},
1353      OPTnumber =    {122},
1354      address =      {Cambridge, MA},
1355      note =         {http://web.mit.edu/globalchange/www/MITJPSPGC\_Rpt122.pdf},
1356    }
1357    
1358    @Article{Follows_etal_05,
1359      author =       {M. Follows and T. Ito and S. Dutkiewicz},
1360      title =        {A Compact and Accurate Carbonate Chemistry Solver for Ocean
1361                      Biogeochemistry Models},
1362      journal =      {Ocean Modeling},
1363      year =         {{in press}},
1364      OPTkey =       {},
1365      OPTvolume =    {},
1366      OPTnumber =    {},
1367      OPTpages =     {},
1368    }
1369    
1370    @Article{McKinley_etal_04,
1371      author =       {G. McKinley and M. J. Follows and J. C. Marshall},
1372      title =        {Mechanisms of air-sea CO$_2$ flux variability in the
1373                      Equatorial Pacific and the North Atlantic},
1374      journal =      {Global Biogeochemical Cycles},
1375      year =         {2004},
1376      OPTkey =       {},
1377      volume =       {18},
1378      number =       {doi:10.1029/2003GB002179},
1379      OPTpages =     {},
1380    }
1381    
1382    @TechReport{Trenberth_etal_89,
1383      author =       {K. Trenberth and J. Olson and W. Large},
1384      title =        {A global wind stress climatology based on ECMWF analyses},
1385      institution =  {NCAR},
1386      year =         {1989},
1387      OPTkey =       {},
1388      OPTtype =      {},
1389      number =       {NCAR/TN-338+STR},
1390      address =      {Boulder, CO},
1391      OPTmonth =     {},
1392    }
1393    
1394    @Article{Wanninkhof_92,
1395      author =       {R. Wanninkhof},
1396      title =        {Relationship between wind speed and gas exchange over the ocean},
1397      journal =      jgr,
1398      year =         {1992},
1399      OPTkey =       {},
1400      volume =       {97},
1401      OPTnumber =    {},
1402      pages =        {7373--7382},
1403      OPTmonth =     {},
1404    }
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1409     title        = {High Resolution Models of the Planetary Boundary Layer.},
1410     booktitle    = {Advances in Environmental Science and Engineering, Vol 1 } ,
1411     editor       = {Pfafflin and Zeigler},
1412     publisher    = {Gordon and Breach, Scientific Publishers}
1413    }
1414    
1415    @Article{chou:92,
1416     author       = {M-D. Chou},
1417     year         = {1992},
1418     title        = {A solar radiation model for use in climate studies.},
1419     journal      = jas,
1420     volume       = {49},
1421     pages        = {762-772}
1422    }
1423    
1424    @Article{chou:90,
1425     author       = {M-D. Chou},
1426     year         = {1990},
1427     title        = {Parameterizations for the absorption of solar radiation
1428                       by O$_2$ and CO$_2$ with applications to climate studies.},
1429     journal      = jclim,
1430     volume       = {3},
1431     pages        = {209-217}
1432    }
1433    
1434    @techreport{chsz:94,
1435     author       = {M.-D. Chou and M.J.Suarez},
1436     year         = {1994},
1437     title        = {An efficient thermal infrared radiation parameterization
1438    for use in general circulation models},
1439     institution  = {National Aeronautics and Space Administration},
1440     type         = {NASA Technical Memorandum},
1441     number       = {104606-Vol 3},
1442     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1443     note         = {http://www.gmao.nasa.gov/}
1444    }
1445    
1446    @Article{clarke:70,
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1450     journal      = qjrms,
1451     volume       = {96},
1452     pages        = {91-114}
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1466     year         = {1989},
1467     title        = {A global climatology of albedo, roughness length and stomatal
1468    resistance for atmospheric general circulation models as represented by the Simple Biosphere model (SiB).},
1469     journal      = jam,
1470     volume       = {28},
1471     pages        = {833-855}
1472    }
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1481     pages        = {113-132}
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1485     author       = {H. M. Helfand and M. Fox-Rabinovitz and L. Takacs and A. Molod},
1486     year         = {1991},
1487     title        = {Simulation of the planetary boundary layer and turbulence in the GLA GCM},
1488     booktitle    = {Proceedings of the AMS Ninth Conference on Numerical Weather Predicition},
1489     year         = 1991,
1490     pages        = {406-425},
1491     publisher    = {American Meteorological Society}
1492    }
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1497     title        = { Climatology of the
1498    Simulated Great Plains Low-Level Jet and Its contribution to the
1499    Continental Moisture Budget of the United States. },
1500     journal      = jclim,
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1502     pages        = {784-806}
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1511     pages        = {91-112}
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1518     institution  = {National Aeronautics and Space Administration},
1519     type         = {NASA Technical Memorandum},
1520     number       = {104538},
1521     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1522     note         = {http://www.gmao.nasa.gov/},
1523    }
1524    
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1527     year         = {1992},
1528     title        = { Modeling the Land Surface Boundary
1529    in Climate Models as a Composite of Independent Vegetation Stands.},
1530     journal      = jgr,
1531     volume       = {97},
1532     pages        = {2697-2715}
1533    }
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1538     title        = { A parameterization for the absorption of solar radiation
1539    in the Earth's atmosphere.  },
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1541     volume       = {31},
1542     pages        = {118-133}
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1558    convection for general circulation models.},
1559     journal      = mwr,
1560     volume       = {120},
1561     pages        = {978-1002}
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1570     publisher    = {American Meteorological Society}
1571    }
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1585     title        = {  A computation of the stratospheric
1586    diabatic circulation using an accurate radiative transfer model},
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1588     volume       = {44},
1589     pages        = {859-876}
1590    }
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1594     year         = {1988},
1595     title        = {  The roles of dry convection, cloud-radiation feedback processes
1596    and the influence of recent improvements in the parameterization of convection in the GLA GCM.  },
1597     journal      = mwr,
1598     volume       = {116},
1599     pages        = {2366-2387}
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1605     title        = {  Dynamical aspects of climate simulations Using the GEOS
1606    General Circulation Model},
1607     institution  = {National Aeronautics and Space Administration},
1608     type         = {NASA Technical Memorandum},
1609     number       = {104606 Volume 10},
1610     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1611     note         = {http://www.gmao.nasa.gov/},
1612    }
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1626     year         = {1977},
1627     title        = {  A numerical experiment on pollutant dispersion in a horizontally-homogenious
1628    atmospheric boundary layer.},
1629     journal      = {Atmos. Environ.},
1630     volume       = {11},
1631     pages        = {1015-1024}
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1634    @Article{zhouetal:95,
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1636     year         = {1995},
1637     title        = {Impact of Orographically Induced Gravity Wave Drag in the GLA GCM},
1638     journal      = qjrms,
1639     volume       = {122},
1640     pages        = {903-927}
1641    }
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1646                       and B. Kosovic and D. Lewellen and C-H. Moeng and P. Siebesma and
1647                       B. Stevens and D.E. Stevens and I. Sykes and M.C. Wyant},
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1649     title          = {An intercomparison of radiatively driven entrainment and turbulence
1650                      in a smoke cloud, as simulated by different numerical models.},
1651     journal        = qjrms,
1652     volume         = {125},
1653     pages          = {391-423}
1654                      }
1655    
1656    @Article{bm:99,
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1658     year           = 1999,
1659     title          = {The Impact of Vertical Resolution Upon GCM Simulations of Marine Stratocumulus.},
1660     journal        = {Climate Dyn.},
1661     volume         = {15},
1662     pages          = {293-318}
1663                      }
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1665    @Article{Inn:01,
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1667     year           = 2001,
1668     title          = {Organization of Tropical Convection in a GCM with Verying Vertical Resolution;
1669                      Implications for the Simulation of the Madden-Julian Oscillation.},
1670     journal        = {Climate Dyn.},
1671     volume         = {17},
1672     pages          = {777-794}
1673                      }
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1675    @Article{kal:89,
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1677                       J. Stackpole and J. Tucillo and L. Umscheid and and D. Williamson},
1678     year           = 1989,
1679     title          = {Rules for Interchange of Physical Parameterizations.},
1680     journal        = bams,
1681     volume         = {70},
1682     pages          = {620-622}
1683                      }
1684    
1685    @Article{wo:98,
1686     author         = {D. Williamson and J.G. Olsen},
1687     year           = 1998,
1688     title          = {A Comparison of Semi-Langrangian and Eulerian Polar Climate Simulations.},
1689     journal        = mwr,
1690     volume         = {126},
1691     pages          = {991-1000}
1692                      }
1693    
1694    @TechReport{MPI-std-20,
1695      author =       {{Message Passing Interface Forum}},
1696      title =        {{MPI}: A Message-Passing Interface standard (version 2.0)},
1697      institution =  {mpi-forum.org},
1698      year =         {1998},
1699    }
1700    
1701    @Article{cam08,
1702      author =       {Jean-Michel Campin and John Marshall and David
1703                      Ferreira},
1704      title =        {Sea-Ice Ocean Coupling Using a Rescaled Vertical
1705                      Coordinate z$^\ast$},
1706      journal =      om,
1707      volume =       24,
1708      number =       {1--2},
1709      pages =        {1--14},
1710      doi =          {10.1016/j.ocemod.2008.05.005},
1711      year =         2008
1712    }
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1714    @Article{geiger98,
1715      author =       {Cathleen A. Geiger and Hibler, III, William D. and
1716                      Stephen F. Ackley},
1717      title =        {Large-Scale Sea Ice Drift and Deformation:
1718                      {C}omparison between Models and Observations in the
1719                      Western {W}eddell {S}ea during 1992},
1720      journal =      jgr,
1721      year =         1998,
1722      volume =       103,
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1724      pages =        {21893--21913}
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1728      author =       {Hibler, III, William D.},
1729      title =        {The role of sea ice dynamics in modeling CO{$_2$}
1730                      increases},
1731      booktitle =    {Climate processes and climate sensitivity},
1732      pages =        {238--253},
1733      publisher =    {AGU},
1734      year =         1984,
1735      editor =       {J. E. Hansen and T. Takahashi},
1736      volume =       29,
1737      series =       {Geophysical Monograph},
1738      address =      {Washington, D.C.}
1739    }
1740    
1741    @Article{hibler87,
1742      author =       {Hibler, III, William D. and Kirk Bryan},
1743      title =        {A Diagnostic Ice-Ocean Model},
1744      journal =      jpo,
1745      year =         1987,
1746      volume =       17,
1747      number =       7,
1748      pages =        {987--1015}
1749    }
1750    
1751    @InCollection{hibler95,
1752      author =       {Hibler, III, William D. and Chi F. Ip},
1753      title =        {The effect of sea ice rheology on {A}rcitc buoy
1754                      drift},
1755      booktitle =    {Ice Mechanics},
1756      pages =        {255--264},
1757      publisher =    {Am. Soc. of Mech. Eng.},
1758      year =         1995,
1759      editor =       {John P. Dempsey and Y. D. S. Rajapakse},
1760      volume =       204,
1761      series =       {AMD},
1762      address =      {New York}
1763    }
1764    
1765    @Article{hibler97,
1766      author =       {Hibler, III, William D. and Erland M. Schulson},
1767      title =        {On Modeling Sea-Ice Fracture and Flow in Numerical
1768                      Investigations of Climate},
1769      journal =      angl,
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1772      pages =        {26--32}
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1776      author =       {Willem Hundsdorfer and R. A. Trompert},
1777      title =        {Method of Lines and Direct Discretization: a
1778                      Comparison for Linear Advection},
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1781      volume =       13,
1782      number =       6,
1783      pages =        {469--490},
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1787    @Article{leppaeranta83,
1788      author =       {Matti Lepp{\"a}ranta},
1789      title =        {A Growth Model for Black Ice, Snow Ican and Snow
1790                      Thickness in Subarctic Basins},
1791      journal =      {Nordic Hydrology},
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1793      volume =       14,
1794      pages =        {59--70}
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1798      author =       {S. Manabe and Kirk Bryan and M. J. Spelman},
1799      title =        {A Global Ocean-Atmosphere Climate Model with Seasonal
1800                      Variation for Future Studies of Climate Sensitivity},
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1803      volume =       3,
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1805    }
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1808      author =       {D. Menemenlis and C. Hill and A. Adcroft and
1809                      J.-M. Campin and B. Cheng and B. Ciotti and
1810                      I. Fukumori and A. Koehl and P. Heimbach and
1811                      C. Henze and T. Lee and D. Stammer and J. Taft and
1812                      J. Zhang},
1813      title =        {{NASA} Supercomputer Improves Prospects for Ocean
1814                      Climate Research},
1815      journal =      eos,
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1819      pages =        {89, 95--96}
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1822    @Article{parkinson79,
1823      author =       {{Parkinson}, Claire~L. and {Washington}, Warren~M.},
1824      title =        "{A Large-Scale Numerical Model of Sea Ice}",
1825      journal =      jgr,
1826      year =         1979,
1827      month =        jan,
1828      volume =       84,
1829      number =       {C1},
1830      pages =        {311--337},
1831      adsurl =       {http://adsabs.harvard.edu/cgi-bin/nph-bib_query?bibcode=1979JGR....84..311P&db_key=PHY},
1832      adsnote =      {Provided by the Smithsonian/NASA Astrophysics Data
1833                      System}
1834    }
1835    
1836    @Article{semtner84,
1837      author =       {Semtner, Jr., Albert J.},
1838      title =        {On Modelling the Seasonal Thermodynamic Cycle of Sea
1839                      Ice in Studies of Climatic Change},
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1847    @Article{zhang97,
1848      author =       {Jinlun Zhang and Hibler, III, William D.},
1849      title =        {On an Efficient Numerical Method for Modeling Sea Ice Dynamics},
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1852      volume =       102,
1853      number =       {C4},
1854      pages =        {8691--8702}
1855    }
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1858      author =       {Jinlun Zhang and Drew A. Rothrock},
1859      title =        {Modeling Global Sea Ice with a Thickness and
1860                      Enthalpy Distribution Model in Generalized
1861                      Curvilinear Coordinates},
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1867    }
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1869    @Article{beckmann99,
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1871                      Timmermann},
1872      title =        {A Numerical Model of the {W}eddell {S}ea:
1873                      Large-Scale Circulation and Water Mass Distribution},
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1875      year =         1999,
1876      volume =       104,
1877      number =       {C10},
1878      pages =        {23,375--23,392}
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1882      author =       {Klaus Grosfeld and R{\"u}diger Gerdes and J{\"u}rgen
1883                      Determann},
1884      title =        {Thermohaline Circulation and Interaction between Ice
1885                      Shelf Cavities and the Adjacent Open Water},
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1888      volume =       102,
1889      number =       {C7},
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1892    
1893    @Article{hellmer89,
1894      author =       {Hartmut H. Hellmer and Dirk J. Olbers},
1895      title =        {A Two-Dimensional Model of the Thermohaline
1896                      Circulation Under an Ice Shelf},
1897      journal =      {Antarct. Sci.},
1898      year =         1989,
1899      volume =       1,
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1905      title =        {Modeling Thermodynamic Ice-Ocean Interactions at the
1906                      Base of an Ice Shelf},
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1908      year =         1999,
1909      volume =       29,
1910      number =       8,
1911      pages =        {1787--1800}
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1914    @Article{jenkins01,
1915      author =       {Adrian Jenkins and Hartmut H. Hellmer and David
1916                      M. Holland},
1917      title =        {The Role of Meltwater Advection in the Formulation
1918                      of Conservative Boundary Conditions at an Ice-Ocean
1919                      Interface},
1920      journal =      jpo,
1921      year =         2001,
1922      volume =       31,
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1925    @Article{losch08,
1926      author =       {Martin Losch},
1927      title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean
1928                      General Circulation Model},
1929      journal =      jgr,
1930      year =         2008,
1931      volume =       113,
1932      number =       {C08043},
1933      doi =          {10.1029/2007JC004368}
1934    }
1935    
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1938        and R. Najjar and K. Caldeira and J.-M. Campin and H. Drange and M. Follows
1939        and Y. Gao and N. Gruber and M.W. Hecht and A. Ishida and F. Joos and K. Lindsay
1940        and G. Madec and E. Maier-Reimer and J.C. Marshall and R.J. Matear and P. Monfray
1941        and A. Mouchet and G.-K. Plattner and J. sarmiento and R. Schlitzer and R. Slater
1942        and I.J. Totterdell and M.-F. Weirig and Y. Yammanaka and A. Yool},
1943     year           = 2002,
1944     title          = {Evaluation of ocean model ventilation with CFC-11:
1945                       comparison of 13 global ocean models},
1946     journal        = om,
1947     volume         = {4},          number= {},             month   = {},
1948     pages          = {89-120}
1949                    }
1950    
1951    @Article{marsh06,
1952     author         = {Marshall, John and Emily Shuckburgh and Helen Jones and Chris Hill},
1953     year           = 2006,
1954     title          = {Estimates and Implications of Surface Eddy Diffusivity
1955                       in the Southern Ocean Derived from Tracer Transport},
1956     journal        = jpo,
1957     volume         = {36},          number= {},             month   = {},
1958     pages          = {1806-1821}
1959                    }
1960    
1961    @InProceedings{hoe-hill:99,
1962      author =       {Hoe, James C. and Chris Hill and Alistair Adcroft},
1963      title =        {A Personal Supercomputer for Climate Research},
1964      booktitle =    {In Proceedings of the ACM/IEEE Super-Computing Confrence},
1965      year =         1999,
1966      pages = {10.1109/SC.1999},
1967      publisher =    {IEEE},
1968    }
1969    
1970    @Article{stevens:90,
1971      author =       {Stevens, D. P.},
1972      title =        {On Open Boundary Conditions for Three Dimensional
1973                      Primitive Equation Ocean Circulation Models},
1974      journal =      {Geophys. Astrophys. Fl. Dyn.},
1975      year =         1990,
1976      volume =       51,
1977      pages =        {103--133}}
1978    
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