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revision 1.1 by heimbach, Thu Oct 4 19:27:24 2001 UTC revision 1.33 by jmc, Thu Jan 17 21:28:22 2008 UTC
# Line 1  Line 1 
1  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}
2  @string{bams    = {Bull.~Am.~Met.~Soc.}}  @string{bams    = {Bull.~Am.~Met.~Soc.}}
3  @string{blm     = {Bound.~Layer~Meteorol.}}  @string{blm     = {Bound.~Layer~Meteorol.}}
4    @string{climd   = {Clim.~Dynamics}}
5  @string{jgr     = {J.~Geophys.~Res.}}  @string{jgr     = {J.~Geophys.~Res.}}
6  @string{ijrs    = {Int.~J.~Remote Sensing}}  @string{ijrs    = {Int.~J.~Remote Sensing}}
7  @string{jas     = {J.~Atmos.~Sci.}}  @string{jas     = {J.~Atmos.~Sci.}}
8    @string{jam     = {J.~Appl.~Meteor.}}
9  @string{jpo     = {J.~Phys.~Oceanogr.}}  @string{jpo     = {J.~Phys.~Oceanogr.}}
10  @string{jclim   = {J.~Clim.}}  @string{jclim   = {J.~Clim.}}
11    @string{jcp     = {J.~Comput.~Phys.}}
12  @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}  @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}
13  @string{jfm     = {J.~Fluid Mech.}}  @string{jfm     = {J.~Fluid Mech.}}
14  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}
15  @string{jms     = {J.~Mar.~Sys.}}  @string{jms     = {J.~Mar.~Sys.}}
16    @string{om      = {Ocean Modelling}}
17  @string{gaos    = {Global Atmos.~Ocean System}}  @string{gaos    = {Global Atmos.~Ocean System}}
18  @string{grl     = {Geophys.~Res.~Lett.}}  @string{grl     = {Geophys.~Res.~Lett.}}
19  @string{dsr     = {Deep Sea Res.}}  @string{dsr     = {Deep Sea Res.}}
# Line 67  Line 71 
71                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
72   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
73                    }                    }
74    
75    @ARTICLE{bugi-hill:06,
76      author = {V. Bugnion and C. Hill},
77      title = {Equilibration mechanisms in an adjoint ocean general
78               circulation model},
79      journal = {Ocean Dynamics},
80      year = {2006},
81      volume = {56},
82      number = {1},
83      pages = {51-61},
84      doi   = {10.1007/s10236-005-0052-z},
85    }
86    
87  @techreport{bis-roh:97,  @techreport{bis-roh:97,
88   author         = {C. Bishof and L. Roh},   author         = {C. Bishof and L. Roh},
# Line 114  Line 130 
130   volume         = {120},   volume         = {120},
131   pages          = {1367--1387},   pages          = {1367--1387},
132                    }                    }
133    
134    @ARTICLE{durr:91,
135      author = {Dale R. Durran},
136      title = {The Third-Order Adams-Bashforth Method: An Attractive Alternative
137               to Leapfrog Time Differencing},
138      journal = mwr,
139      year = {1991},
140      volume = {119},
141      pages  = {702-720},
142    }
143    
144    
145    @ARTICLE{dutk-etal:06,
146      author = {S. Dutkiewicz and M.J. Follows and P. Heimbach and J. Marshall},
147      title = {Controls on ocean productivity and air-sea carbon flux:
148               An adjoint model sensitivity study},
149      journal = grl,
150      year = {2006},
151      volume = {33},
152      pages  = {L02603},
153      doi    = {10.1029/2005GL024987},
154    }
155    
156  @Article{err:97,  @Article{err:97,
157   author         = {R.M. Errico},   author         = {R.M. Errico},
# Line 250  Line 288 
288   pages          = {401 pp.},   pages          = {401 pp.},
289                    }                    }
290                                                                        
291    @incollection{gri:89,
292     author         = {A. Griewank},
293     year           = 1989,
294     title          = {On automatic differentiation},
295     booktitle      = {Mathematical Programming: Recent Developments and
296                      Applications},
297     pages          = {83--108},
298     editor         = {M. Iri and K. Tanabe},
299     publisher      = {Kluwer},
300     address        = {Dordrecht, NL},
301                      }
302    
303    @Article{gri:92,
304      author =       {A.~Griewank},
305      title =        {Achieving logarithmic growth of temporal and spatial
306      complexity in reverse {A}utomatic {D}ifferentiation},
307      journal       = {Optimization Methods and Software},
308      year          = {1992},
309      volume        = {1},
310      pages         = {35--54}
311    }
312    
313  @book{gri:00,  @book{gri:00,
314   author         = {A. Griewank},   author         = {A. Griewank},
315   title          = {Evaluating Derivatives. Principles and Techniques   title          = {Evaluating Derivatives. Principles and Techniques
# Line 271  Line 331 
331   volume         = {39},   volume         = {39},
332   pages          = {2038--3050},   pages          = {2038--3050},
333                    }                    }
334    
335    @Article{Haney,
336      author =       {R.L. Haney},
337      title =        {Surface thermal boundary conditions for ocean
338                      circulation models},
339      journal =      jpo,
340      year =         1971,
341      volume =       1,
342      pages =        {241--248}
343    }
344    
345    @Article{held-suar:94,
346     author         = {I.M. Held and M.J. Suarez},
347     year           = {1994},
348     title          = {A proposal for the intercomparison of the dynamical cores of atmospheric general circulation models},
349     journal        = {Bulletin of the American Meteorological Society},
350     volume         = {75(10)},
351     pages          = {1825-1830}
352    }
353    
354  @Article{hil-eta:01,  @Article{hil-eta:01,
355   author         = {C. Hill and M. Follows and V. Bugnion and   author         = {C. Hill and M. Follows and V. Bugnion and
356                    J. Marshall},                    J. Marshall},
357   year           = {2001},   year           = {2002},
358   title          = {Spatial and Temporal Impacts of ocean general   title          = {Spatial and Temporal Impacts of ocean general
359                    circulation on carbon sequestration},                    circulation on carbon sequestration},
360   journal        = {journal ???},   journal        = {Global Biogeochemical Cycles},
361   note           = {submitted},   note           = {submitted},
362                    }                    }
363    
364    @ARTICLE{hib80,
365      AUTHOR      = "W. D. {Hibler, III}",
366      TITLE       = "Modeling a Variable Thickness Sea Ice Cover",
367      JOURNAL     = mwr,
368      YEAR        = 1980,
369      VOLUME      = 1,
370      PAGES       = "1943-1973"
371    }
372    
373    @Article{Holland75,
374     author         = {W.R. Holland and L. B. Lin},
375     year           = {1975a},
376     title          = {On the origin of mesoscale eddies and their contribution
377                       to the general circulation of the ocean. I. A preliminary
378                       numerical experiment},
379     journal        = jpo,
380     volume         = {5},
381     pages          = {642-657}
382                      }
383    
384    @Article{hol-lin:75b,
385     author         = {W.R. Holland and L. B. Lin},
386     year           = {1975b},
387     title          = {On the origin of mesoscale eddies and their contribution
388                       to the general circulation of the ocean. II. A parameter
389                       study},
390     journal        = jpo,
391     volume         = {5},
392     pages          = {658-669}
393                      }
394    
395    @Article{jam-oze:86,
396     author         = {B.M. Jamart and J. Ozer},
397     year           = {1986},
398     title          = {Numerical boundary layers and spurious residual flows},
399     journal        = jgr,
400     volume         = {91},
401     pages          = {10,621-10,631}
402                      }
403    
404  @book{kas-eta:00,  @book{kas-eta:00,
405   author         = {P. Kasibhatla and M. Heimann and P. Rayner and   author         = {P. Kasibhatla and M. Heimann and P. Rayner and
406                    N. Mahowald and R.G. Prinn and D.E. Hartley},                    N. Mahowald and R.G. Prinn and D.E. Hartley},
# Line 326  Line 445 
445   volume         = {38A},   volume         = {38A},
446   pages          = {97--110},   pages          = {97--110},
447                    }                    }
448    
449    @TechReport{lev:94a,
450      author =       {S. Levitus and T.P.Boyer},
451      title =        {{World Ocean Atlas 1994 Volume 3: Salinity}},
452      institution =  {NOAA Atlas NESDIS 3},
453      year =         1994,
454      OPTkey =       {},
455      OPTtype =      {},
456      OPTnumber =    {},
457      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
458      OPTmonth =     {},
459      OPTnote =      {},
460      OPTannote =    {}
461    }
462    
463    
464    @TechReport{Levitus94,
465      author =       {S. Levitus and T.P.Boyer},
466      title =        {{World Ocean Atlas 1994 Volume 4: Temperature}},
467      institution =  {NOAA Atlas NESDIS 4},
468      year =         1994,
469      OPTkey =       {},
470      OPTtype =      {},
471      OPTnumber =    {},
472      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
473      OPTmonth =     {},
474      OPTnote =      {},
475      OPTannote =    {}
476    }
477    
478    
479  @Article{lew-der:85,  @Article{lew-der:85,
480   author         = {J. Lewis and J. Derber},   author         = {J. Lewis and J. Derber},
# Line 348  Line 497 
497   pages          = {38 pp.},   pages          = {38 pp.},
498   address        = {Delft (NL)},   address        = {Delft (NL)},
499                    }                    }
500    
501    @ARTICLE{losc-heim:06,
502      author = {M. Losch and P. Heimbach},
503      title = {Adjoint sensitivity of an ocean general circulation model
504               to bottom topography},
505      journal = jpo,
506      year = {2006},
507      volume = {{in press}},
508      url    = {http://mitgcm.org/pdfs/Los2006a.pdf},
509    }
510    
511    
512  @Article{maro-wun:93,  @Article{maro-wun:93,
513   author         = {J. Marotzke and C. Wunsch},   author         = {J. Marotzke and C. Wunsch},
# Line 394  Line 554 
554   pages          = {5,753--5,766},   pages          = {5,753--5,766},
555                    }                    }
556    
557  @Article{mars-sha:98,  @Article{mars-eta:98,
558   author         = {J. Marshall and H. Jones and C. Hill},   author         = {J. Marshall and H. Jones and C. Hill},
559   year           = 1998,   year           = 1998,
560   title          = {Efficient ocean modeling using   title          = {Efficient ocean modeling using
# Line 402  Line 562 
562   journal        = jms,   journal        = jms,
563   volume         = {18},   volume         = {18},
564   pages          = {115--134},   pages          = {115--134},
565     url            = {http://mitgcm.org/pdfs/journal_of_marine_systems_1998.pdf},
566     doi            = {10.1016/S0924-7963\%2898\%2900008-6},
567                    }                    }
568    
569  @Article{mcw:96,  @Article{mcw:96,
# Line 412  Line 574 
574   volume         = {28},   volume         = {28},
575   pages          = {215--248},   pages          = {215--248},
576                    }                    }
577    
578    %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
579    %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.
580    %% (Available from Unidata or in PostScript form by anonymous FTP from
581    %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also
582    %%   a hypertext version of the User's Guide available at
583    %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's
584    %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are
585    %%   also available.
586    
587    @incollection{naum-etal:06,
588            Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},
589            Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},
590            Editor = {{P. Wesseling, E. O~nate and J. Periaux}},
591            Pages = {~},
592            Publisher = {TU Delft},
593            Title = {Adjoint code by source transformation with OpenAD/F},
594            Year = {2006}}
595    
596    @TechReport{rew:97,
597      author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
598      title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},
599                      An Interface for Data Access, Version 3},
600      institution =  {Unidata Program Center},
601      type =         {Report},
602      address =      {Boulder, Colorado},
603      year =         1997,
604      note =         {http://www.unidata.ucar.edu/packages/netcdf/},
605    }
606    
607    
608  @Article{res-eta:98,  @Article{res-eta:98,
609   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},
610   year           = 1998,   year           = 1998,
611   title          = {Circumvening storage limitations in variational   title          = {Circumventing storage limitations in variational
612                    data assimilation studies},                    data assimilation studies},
613   journal        = {SIAM J. Sci. Comput.},   journal        = {SIAM J. Sci. Comput.},
614   volume         = {19},   volume         = {19},
# Line 446  Line 638 
638   publisher      = {Springer-Verlag},   publisher      = {Springer-Verlag},
639   address        = {Berlin (Germany)},   address        = {Berlin (Germany)},
640                    }                    }
641    
642    @article{utke-etal:08,
643            Author = {J. Utke and U. Naumann and M. Fagan and N. Tallent and M. Strout and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch},
644            Date-Modified = {2007-11-19 10:15:08 -0500},
645            Journal = {{ACM} Transactions on Mathematical Software},
646            Pages = {~},
647            Title = {OpenAD/F: A modular open source tool for automatic differentiation of Fortran codes},
648            Volume = {34(4)},
649            Year = {2008}}
650    
651    @Article{DaSilva94,
652     author         = {A. da Silva and A. C. Young and S. Levitus},
653     year           = 1994,
654     title          = {Atlas of Surface Marine Data 1994, Volume 1: Algorithms and Procedures},
655     journal        = {NOAA Atlas NESDIS},
656     volume         = {6},
657     publisher      = {U.S. Department of Commerce},
658     address        = {Washington, D.C. (USA)},
659     note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
660     url            = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
661                      }
662    
663  @techreport{sta-eta:97,  @techreport{stam-etal:97,
664   author         = {D. Stammer and C. Wunsch and R. Giering and   author         = {D. Stammer and C. Wunsch and R. Giering and
665                    Q. Zhang and J. Marotzke an J. Marshall and                    Q. Zhang and J. Marotzke and J. Marshall and
666                    C. Hill},                    C. Hill},
667   year           = 1997,   year           = 1997,
668   title          = {The global ocean circulation estimated from   title          = {The global ocean circulation estimated from
# Line 463  Line 676 
676   address        = {Cambridge (MA), USA},   address        = {Cambridge (MA), USA},
677                    }                    }
678    
679  @Article{sta-eta:01,  @ARTICLE{stam-etal:02,
680   author         = {D. Stammer and C. Wunsch and R. Giering and    author = {D. Stammer and C. Wunsch and R. Giering and C. Eckert and P. Heimbach and J. Marotzke and A. Adcroft and C.N. Hill and J. Marshall},
681                    C. Eckert and P. Heimbach and J. Marotzke and    title = {The global ocean circulation and transports during 1992 -- 1997, estimated from ocean observations and a general circulation model.},
682                    A. Adcroft and C. Hill and J. Marshall},    journal = jgr,
683   year           = 2001,    year = {2002a},
684   title          = {The global ocean circulation during 1992 -- 1997,    volume = {107(C9)},
685                    estimated from ocean observations and a general    pages = {3118},
686                    circulation model},    doi   = {10.1029/2001JC000888},
687   journal        = jgr,  }
688   note           = {submitted},  
689    
690    @Article{Stommel66,
691     author         = {H. Stommel},
692     year           = 1948,
693     title          = {The western intensification of wind-driven ocean currents},
694     journal        = {Trans. Am. Geophys. Union},
695     volume         = {29},
696     pages          = {206},
697                    }                    }
698    
699  @Article{tal-cou:87,  @Article{tal-cou:87,
# Line 606  Line 827 
827   volume         = {57},   volume         = {57},
828   pages          = {305--334},   pages          = {305--334},
829                    }                    }
830    
831    
832    @InCollection{hill:95,
833      author =       {Hill, C. and J. Marshall},
834      title =        {Application of a Parallel Navier-Stokes Model to
835                      Ocean Circulation in Parallel Computational Fluid
836                      Dynamics},
837      booktitle =    {Implementations and Results Using Parallel
838                      Computers},
839      pages =        {545-552},
840      publisher =    {Elsevier Science B.V.: New York},
841      year =         1995,
842      editor =       {A. Ecer, J. Periaux, N. Satofuka and S. Taylor}
843    }
844    
845    
846    @Article{marshall:97a,
847      author =       {Marshall, J. and C. Hill and L. Perelman and A. Adcroft},
848      title =        {Hydrostatic, quasi-hydrostatic, and nonhydrostatic ocean
849                     modeling},
850      journal =      jgr,
851      year =         1997,
852      volume =       102,
853      number =       {C3},
854      pages =        {5733-5752},
855      url      =     {http://mitgcm.org/pdfs/96JC02775.pdf},
856    }
857    
858    @Article{marshall:97b,
859      author =       {Marshall, J. and A. Adcroft and C. Hill and L. Perelman and C. Heisey},
860      title =        {A finite-volume, incompressible Navier Stokes model for
861                      studies of the ocean on parallel computers},
862      journal =      jgr,
863      year =         1997,
864      volume =       102,
865      number =       {C3},
866      pages =        {5753-5766},
867      url      =     {http://mitgcm.org/pdfs/96JC02776.pdf},
868    }
869    
870    @Article{adcroft:97,
871      author =       {Adcroft, A.J. and Hill, C.N. and J. Marshall},
872      title =        {Representation of topography by shaved cells in a height
873                      coordinate ocean model},
874      journal =      mwr,
875      year =         1997,
876      volume =       125,
877      pages =        {2293-2315},
878      url   =        {http://mitgcm.org/pdfs/mwr_1997.pdf},
879      doi       =    {10.1175/1520-0493\%281997\%29125<2293:ROTBSC>2.0.CO;2},
880    }
881    
882    @Article{adcroft:04a,
883      author =       {Adcroft, A. and J.-M. Campin},
884      title =        {Re-scaled height coordinates for accurate representation
885                      of free-surface flows in ocean circulation models},
886      journal =      om,
887      year =         2004,
888      volume =       7,
889      pages =        {269-284},
890      doi   =        {10.1016/j.ocemod.2003.09.003},
891    }
892    
893    @Article{adcroft:04b,
894      author =       {Adcroft, A. and J.-M. Campin and C. Hill and J. Marshall},
895      title =        {Implementation of an Atmosphere-Ocean General Circulation Model
896                      on the Expanded Spherical Cube},
897      journal =      mwr,
898      year =         2004,
899      volume =       132,
900      pages =        {2845-2863},
901      url   =        {http://mitgcm.org/pdfs/mwr_2004.pdf},
902      doi     =      {10.1175/MWR2823.1},
903    }
904    
905    @inproceedings{adcroft:04c,
906      author =       {Adcroft, A. and C. Hill and J.-M. Campin and J. Marshall
907                      and P. Heimbach},
908      title =        {Overview of the Formulation and Numerics of the MIT GCM},
909      booktitle =   {Proceedings of the ECMWF seminar series on Numerical Methods,
910                     Recent developments in numerical methods for atmosphere and
911                     ocean modelling},
912      year =         2004,
913      pages =        {139-149},
914      url   =        {http://mitgcm.org/pdfs/ECMWF2004-Adcroft.pdf},
915     publisher =     ecmwf
916    }
917    
918    @Article{marshall:04,
919      author =       {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White},
920      title =        {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms},
921      journal =      mwr,
922      year =         2004,
923      volume =       132,
924      pages =        {2882-2894},
925      url   =        {http://mitgcm.org/pdfs/a_o_iso.pdf},
926      doi    =       {10.1175/MWR2835.1},
927    }
928    
929    @Article{visbeck:97,
930      author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall},
931      title =        {Specification of eddy transfer coefficients in
932                      coarse-resolution ocean circulation models},
933      journal =      jpo,
934      year =         1997,
935      volume =       27,
936      number =       3,
937      pages =        {381-402}
938    }
939    
940    @Article{shaw:98,
941      author =       {Shaw; A. Arvind, Cho, K.-C., Hill, C., Johnson, R.P.
942                      and Marshall, J.},
943      title =        {A comparison of implicitly parallel multi-threaded and
944                      data-parallel implementations of an ocean model based
945                      on the Navier-Stokes equations},
946      journal =      {J. of Parallel and Distributed Computing},
947      year =         1998,
948      volume =       48,
949      number =       1,
950      pages =        {1-51}
951    }
952    
953    @Article{mjn:99,
954      author =       {Marshall, J., Jamous, D and J. Nilsson},
955      title =        {Reconciling `thermodynamic' and `dynamic' methods of
956                      computation of water-mass transformation rates},
957      journal =      {DSR},
958      year =         1999,
959      volume =       46,
960      pages =        {545-572}
961    }
962    
963    @Article{ms:99,
964      author =       {Marshall, J and F. Schott},
965      title =        {Open ocean deep convection: observations, models and theory},
966      journal =      {Rev. Geophys.},
967      year =         1999,
968      volume =       37,
969      number =       1,
970      pages =        {1-64}
971    }
972    
973    @Article{adcroft:99,
974      author =       {Adcroft, A., Hill C. and J. Marshall},
975      title =        {A new treatment of the Coriolis terms in C-grid models
976                      at both high and low resolutions},
977      journal =      mwr,
978      year =         1999,
979      volume =       127,
980      pages =        {1928-1936},
981      url   =        {http://mitgcm.org/pdfs/mwr_1999.pdf},
982      doi   =        {10.1175/1520-0493\%281999\%29127<1928:ANTOTC>2.0.CO;2},
983    }
984    
985    @InProceedings{hill:99,
986      author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall},
987      title =        {A Strategy for Terascale Climate Modeling},
988      booktitle =    {In Proceedings of the Eighth ECMWF Workshop on the Use of Parallel Processors in Meteorology},
989      year =         1999,
990      pages = {406-425},
991      publisher =    {World Scientific},
992    }
993    
994    @Article{wardle:00,
995      author =       {Wardle R. and Marshall J.},
996      title =        {Representation of eddies in primitive equation models by a PV flux},
997      journal =      jpo,
998      year =         2000,
999      volume =       30,
1000      number =       10,
1001      pages =        {2481-2503}
1002    }
1003    
1004    @Article{ac:02,
1005      author =       {Adcroft, A. and J.-M. Campin},
1006      title =        {Comparison of finite volume schemes and direct-space-time
1007                      methods for ocean circulation models},
1008      journal =      om,
1009      year =         2002,
1010      note =         {in preparation}
1011    }
1012    
1013    @Article{adcroft:02,
1014      author =       {Adcroft, A., et~al.},
1015      title =        {Energy conversion in discrete numerical models},
1016      journal =      om,
1017      year =         2002,
1018      note =         {in preparation}
1019    }
1020    
1021    @InCollection{arakawa:77,
1022      author =       {Arakawa, A. and Lamb, V.},
1023      title =        {Computational Design of the Basic Dynamical Processes of
1024                      the UCLA General Circulation Model},
1025      booktitle =    {Methods in Computational Physics},
1026      pages =        {174-267},
1027      publisher =    {Academic Press},
1028      year =         1977,
1029      volume =       17
1030    }
1031    
1032    @Article{miller_white:84,
1033      author =       {Miller, M. J. and White, A. A.},
1034      title =        {On the non-hydrostatic equations in pressure
1035                      and sigma coordiantes},
1036      journal =      qjrms,
1037      year =         1984,
1038      volume =       110,
1039      pages =        {515-533}
1040    }
1041    
1042    @Article{white:89,
1043      author =       {White, A. A.},
1044      title =        {An extended version of a nonhydrostatic, pressure coordiante model},
1045      journal =      qjrms,
1046      year =         1989,
1047      volume =       115,
1048      pages =        {1243-1251}
1049    }
1050    
1051    @Article{adcroft:98,
1052      author =       {Adcroft, A. and Marshall, D.},
1053      title =        {How slippery are piecewise-constant coastlines in numerical
1054                      ocean models?},
1055      journal =      {Tellus},
1056      year =         1998,
1057      volume =       50,
1058      number =       1,
1059      pages =        {95-108}
1060    }
1061    
1062    @PhdThesis{adcroft:95,
1063      author =       {Adcroft, A.},
1064      title =        {Numerical Algorithms for use in a Dynamical Model of the
1065                      Ocean},
1066      school =       {Imperial College, London},
1067      year =         1995
1068    }
1069    
1070    @Article{griffies:00,
1071      author =       {Griffies, S.,M. and Hallberg, R.,W.},
1072      title =        {Biharmonic friction with a Smagorinsky-like viscosity for
1073                      use in large-scale eddy-permitting ocean models},
1074      journal =      mwr,
1075      year =         2000,
1076      volume =       128,
1077      number =       8,
1078      pages =        {2935-2946}
1079    }
1080    
1081    @Article{wajsowicz:93,
1082      author =       {Wajsowicz, R.},
1083      title =        {A CONSISTENT FORMULATION OF THE ANISOTROPIC STRESS TENSOR
1084                      FOR USE IN MODELS OF THE LARGE-SCALE OCEAN CIRCULATION},
1085      journal =      jcp,
1086      year =         1993,
1087      volume =       105,
1088      number =       2,
1089      pages =        {333-338}
1090    }
1091    
1092    @Article{campin:02,
1093      author =       {Campin, J.-M. and A. Adcroft and C. Hill and J. Marshall},
1094      title =        {Conservation of properties in a free-surface model},
1095      journal =      om,
1096      year =         2004,
1097      volume =       6,
1098      pages =        {221-244}
1099    }
1100    
1101    @Article{dm:95,
1102      author =       {Danabasoglu, G. and McWilliams J.C.},
1103      title =        {Sensitivity of the global ocean circulation to parameterizations of mesoscale tracer transports},
1104      journal =      jclim,
1105      year =         1995,
1106      volume =       8,
1107      number =       12,
1108      pages =        {2967-2987}
1109    }
1110    
1111    @Article{ldd:97,
1112      author =       {Large, W.G. and Danabasoglu, G. and Doney, S.C. and McWilliams, J.C.},
1113      title =        {Sensitivity to surface forcing and boundary layer mixing in a global ocean model: Annual-mean climatology},
1114      journal =      jpo,
1115      year =         1997,
1116      volume =       27,
1117      number =       11,
1118      pages =        {2418-2447}
1119    }
1120    
1121    @Article{gkw:99,
1122      author =       {Gerdes R. and Koberle C. and Beckmann A. and Herrmann P. and Willebrand J.},
1123      title =        {Mechanisms for spreading of Mediterranean water in
1124                      coarse-resolution numerical models},
1125      journal =      jpo,
1126      year =         1999,
1127      volume =       29,
1128      number =       8,
1129      pages =        {1682-1700}
1130    }
1131    
1132    @incollection{roe:85,
1133     author         = {P.L. Roe},
1134     year           = 1985,
1135     title          = {Some contributions to the modelling of discontinuous flows},
1136     booktitle      = {Large-Scale Computations in Fluid Mechanics},
1137     series         = {Lectures in Applied Mathematics},
1138     volume         = 22,
1139     pages          = {163-193},
1140     editor         = {B.E. Engquist and S. Osher and R.C.J. Somerville},
1141     publisher      = {American Mathematical Society},
1142     address        = {Providence, RI},
1143    }
1144    
1145    @Article{trenberth90,
1146      author =       {K. M. Trenberth and J. Olson and W. G. Large},
1147      title =        {The Mean Annual Cycle in {G}lobal {O}cean Wind
1148                      Stress},
1149      journal =      jpo,
1150      year =         1990,
1151      volume =       20,
1152      pages =        {1742--1760}
1153    }
1154    
1155    @Article{molteni:03,
1156      author =       {F. Molteni},
1157      title =        {Atmospheric simulations using a {GCM} with simplified physical
1158                      parametrization, {I}: Model climatology and variability in
1159                      multidecadal experiments},
1160      journal =      climd,
1161      year =         2003,
1162      volume =       20,
1163      pages =        {175--191}
1164    }
1165    
1166    @Article{jiang99,
1167      author =       {S. Jiang and P. H. Stone and P. Malanotte-Rizzoli},
1168      title =        {An Assessment of the {G}eophysical {F}luid
1169                      {D}ynamics {L}aboratory Ocean Model with Coarse
1170                      Resolution: Annual-Mean Climatology},
1171      journal =      jgr,
1172      year =         1999,
1173      volume =       104,
1174      number =       {C11},
1175      pages =        {25,623--25,645}
1176    }
1177    
1178    @Article{szoeke02,
1179      author =       {de Szoeke, Roland A. and Roger M. Samelson},
1180      title =        {The Duality between the {B}oussinesq and
1181                      {N}on-{B}oussinesq Hydrostatic Equations of Motion},
1182      journal =      jpo,
1183      year =         2002,
1184      volume =       32,
1185      number =       8,
1186      pages =        {2194--2203}
1187    }
1188    
1189    @Article{jackett95,
1190      author =       {David R. Jackett and Trevor J. McDougall},
1191      title =        {Minimal Adjustment of Hydrographic Profiles to
1192                      Achieve Static Stability},
1193      journal =      jaot,
1194      year =         1995,
1195      volume =       12,
1196      number =       4,
1197      pages =        {381--389}
1198    }
1199    
1200    @Article{mcdougall03,
1201      author =       {Trevor J. McDougall and David R. Jackett and Daniel
1202                      G. Wright and Rainer Feistel},
1203      title =        {Accurate and Computationally Efficient Algorithms
1204                      for Potential Temperature and Density of Seawater},
1205      journal =      jaot,
1206      year =         {2003},
1207      OPTkey =       {},
1208      OPTvolume =    {},
1209      OPTnumber =    {},
1210      OPTpages =     {},
1211      OPTmonth =     {},
1212      OPTnote =      {{\textup{In press}}},
1213      OPTannote =    {}
1214    }
1215    
1216    @TechReport{fofonoff83,
1217      author =       "Fofonoff, P. and Millard, Jr., R.C.",
1218      title =        "Algorithms for Computation of Fundamental Properties
1219                      of Seawater",
1220      institution =  "Unesco",
1221      year =         1983,
1222      type =         "Unesco Technical Papers in Marine Science",
1223      number =       44,
1224      pages =        {53 pp.}
1225    }
1226    
1227    @ARTICLE{zha98a,
1228      AUTHOR      = "J. Zhang and W. D. {Hibler, III} and M. Steele
1229                     and D. A. Rothrock",
1230      TITLE       = "Arctic ice-ocean modeling with and without climate restoring",
1231      JOURNAL     = jpo,
1232      YEAR        = 1998,
1233      VOLUME      = 28,
1234      PAGES       = "191-217"
1235    }
1236    
1237    @ARTICLE{sem76,
1238      AUTHOR      = "Semtner, Jr., Albert J.",
1239      TITLE       = "A model for the thermodynamic growth of sea ice in
1240                     numerical investigations of climate",
1241      JOURNAL     = jpo,
1242      YEAR        = 1976,
1243      VOLUME      = 6,
1244      PAGES       = "379-389"
1245    }
1246    
1247    @ARTICLE{win00,
1248      AUTHOR      = "M. Winton",
1249      TITLE       = "A reformulated three-layer sea ice model",
1250      JOURNAL     = jaot,
1251      YEAR        = 2000,
1252      VOLUME      = 17,
1253      PAGES       = "525-531"
1254    }
1255    
1256    @ARTICLE{hib79,
1257      AUTHOR      = "W. D. {Hibler, III}",
1258      TITLE       = "A Dynamic Thermodynamic Sea Ice Model",
1259      JOURNAL     = jpo,
1260      YEAR        = 1979,
1261      VOLUME      = 9,
1262      PAGES       = "815-846"
1263    }
1264    
1265    @ARTICLE{fla92,
1266      AUTHOR      = "G. M. Flato and W. D. {Hibler, III}",
1267      TITLE       = "Modeling pack ice as a cavitating fluid",
1268      JOURNAL     = jpo,
1269      YEAR        = 1992,
1270      VOLUME      = 22,
1271      PAGES       = "626-651"
1272    }
1273    
1274    @ARTICLE{hun97,
1275      AUTHOR      = "E. C. Hunke and J. K. Dukowicz",
1276      TITLE       = "An elastic-viscous-plastic model for sea ice dynamics",
1277      JOURNAL     = jpo,
1278      YEAR        = 1997,
1279      VOLUME      = 27,
1280      PAGES       = "1849-1867"
1281    }
1282    
1283    @ARTICLE{zha00,
1284      AUTHOR      = "Jinlun Zhang and Drew Rothrock",
1285      TITLE       = "Modeling Arctic Sea Ice with an Efficient Plastic Solution",
1286      JOURNAL     = jgr,
1287      YEAR        = 2000,
1288      VOLUME      = 105,
1289      PAGES       = "3325-3338"
1290    }
1291    
1292    @Article{Shapiro_70,
1293      author =       {Shapiro, R.},
1294      title =        {Smoothing, filtering, and boundary effects},
1295      journal =      {Reviews of Geophysics and Space Physics},
1296      year =         {1970},
1297      volume =       {8},
1298      number =       {2},
1299      pages =        {359--387},
1300    }
1301    
1302    @TechReport{Dutkiewicz_etal_05,
1303      author =       {S. Dutkiewicz and A. Sokolov and J. Scott and P. Stone},
1304      title =        {A Three-Dimensional Ocean-Seaice-Carbon Cycle Model and
1305                      its Coupling to a Two-Dimensional Atmospheric Model: Uses
1306                      in Climate Change Studies, Report 122},
1307      institution =  {MIT Joint Program of the Science and Policy of Global Change},
1308      year =         {2005},
1309      OPTnumber =    {122},
1310      address =      {Cambridge, MA},
1311      note =         {http://web.mit.edu/globalchange/www/MITJPSPGC\_Rpt122.pdf},
1312    }
1313    
1314    @Article{Follows_etal_05,
1315      author =       {M. Follows and T. Ito and S. Dutkiewicz},
1316      title =        {A Compact and Accurate Carbonate Chemistry Solver for Ocean
1317                      Biogeochemistry Models},
1318      journal =      {Ocean Modeling},
1319      year =         {{in press}},
1320      OPTkey =       {},
1321      OPTvolume =    {},
1322      OPTnumber =    {},
1323      OPTpages =     {},
1324    }
1325    
1326    @Article{McKinley_etal_04,
1327      author =       {G. McKinley and M. J. Follows and J. C. Marshall},
1328      title =        {Mechanisms of air-sea CO$_2$ flux variability in the
1329                      Equatorial Pacific and the North Atlantic},
1330      journal =      {Global Biogeochemical Cycles},
1331      year =         {2004},
1332      OPTkey =       {},
1333      volume =       {18},
1334      number =       {doi:10.1029/2003GB002179},
1335      OPTpages =     {},
1336    }
1337    
1338    @TechReport{Trenberth_etal_89,
1339      author =       {K. Trenberth and J. Olson and W. Large},
1340      title =        {A global wind stress climatology based on ECMWF analyses},
1341      institution =  {NCAR},
1342      year =         {1989},
1343      OPTkey =       {},
1344      OPTtype =      {},
1345      number =       {NCAR/TN-338+STR},
1346      address =      {Boulder, CO},
1347      OPTmonth =     {},
1348    }
1349    
1350    @Article{Wanninkhof_92,
1351      author =       {R. Wanninkhof},
1352      title =        {Relationship between wind speed and gas exchange over the ocean},
1353      journal =      jgr,
1354      year =         {1992},
1355      OPTkey =       {},
1356      volume =       {97},
1357      OPTnumber =    {},
1358      pages =        {7373--7382},
1359      OPTmonth =     {},
1360    }
1361    
1362    @incollection{black:77,
1363     author       = {A. K. Blackadar},
1364     year         = {1977},
1365     title        = {High Resolution Models of the Planetary Boundary Layer.},
1366     booktitle    = {Advances in Environmental Science and Engineering, Vol 1 } ,
1367     editor       = {Pfafflin and Zeigler},
1368     publisher    = {Gordon and Breach, Scientific Publishers}
1369    }
1370    
1371    @Article{chou:92,
1372     author       = {M-D. Chou},
1373     year         = {1992},
1374     title        = {A solar radiation model for use in climate studies.},
1375     journal      = jas,
1376     volume       = {49},
1377     pages        = {762-772}
1378    }
1379    
1380    @Article{chou:90,
1381     author       = {M-D. Chou},
1382     year         = {1990},
1383     title        = {Parameterizations for the absorption of solar radiation
1384                       by O$_2$ and CO$_2$ with applications to climate studies.},
1385     journal      = jclim,
1386     volume       = {3},
1387     pages        = {209-217}
1388    }
1389    
1390    @techreport{chsz:94,
1391     author       = {M.-D. Chou and M.J.Suarez},
1392     year         = {1994},
1393     title        = {An efficient thermal infrared radiation parameterization
1394    for use in general circulation models},
1395     institution  = {National Aeronautics and Space Administration},
1396     type         = {NASA Technical Memorandum},
1397     number       = {104606-Vol 3},
1398     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1399     note         = {http://www.gmao.nasa.gov/}
1400    }
1401    
1402    @Article{clarke:70,
1403     author       = {R. H. Clarke},
1404     year         = {1970},
1405     title        = {Observational studies in the atmospheric boundary layer.},
1406     journal      = qjrms,
1407     volume       = {96},
1408     pages        = {91-114}
1409    }
1410    
1411    @Article{deftow:94,
1412     author       = { R. S. Defries and J. R. G. Townshend},
1413     year         = {1994},
1414     title        = {NDVI-derived Land Cover Classification at Global Scales. },
1415     journal      = {Int'l J. Rem. Sens.} ,
1416     volume       = {15},
1417     pages        = {3567-3586}
1418    }
1419    
1420    @Article{dorsell:89,
1421     author       = { J. L. Dorman and P. J. Sellers},
1422     year         = {1989},
1423     title        = {A global climatology of albedo, roughness length and stomatal
1424    resistance for atmospheric general circulation models as represented by the Simple Biosphere model (SiB).},
1425     journal      = jam,
1426     volume       = {28},
1427     pages        = {833-855}
1428    }
1429    
1430    @Article{helflab:88,
1431     author       = { H. M. Helfand and J. C. Labraga},
1432     year         = {1988},
1433     title        = { Design of a non-singular level 2.5 second-order closure
1434    model for the prediction of atmospheric turbulence. },
1435     journal      = jas,
1436     volume       = {45},
1437     pages        = {113-132}
1438    }
1439    
1440    @inproceedings{helfetal:91,
1441     author       = {H. M. Helfand and M. Fox-Rabinovitz and L. Takacs and A. Molod},
1442     year         = {1991},
1443     title        = {Simulation of the planetary boundary layer and turbulence in the GLA GCM},
1444     booktitle    = {Proceedings of the AMS Ninth Conference on Numerical Weather Predicition},
1445     year         = 1991,
1446     pages        = {406-425},
1447     publisher    = {American Meteorological Society}
1448    }
1449    
1450    @Article{helfschu:95,
1451     author       = {H. M. Helfand and S. D. Schubert},
1452     year         = {1995},
1453     title        = { Climatology of the
1454    Simulated Great Plains Low-Level Jet and Its contribution to the
1455    Continental Moisture Budget of the United States. },
1456     journal      = jclim,
1457     volume       = {8},
1458     pages        = {784-806}
1459    }
1460    
1461    @Article{kondo:75,
1462     author       = {J. Kondo},
1463     year         = {1975},
1464     title        = {Air-sea bulk transfer coefficients in diabatic conditions.},
1465     journal      = blm,
1466     volume       = {9},
1467     pages        = {91-112}
1468    }
1469    
1470    @techreport{ks:91,
1471     author       = { Randal D. Koster and Max J. Suarez},
1472     year         = {1991},
1473     title        = { A Simplified Treatment of SiB's Land Surface Albedo Parameterization.},
1474     institution  = {National Aeronautics and Space Administration},
1475     type         = {NASA Technical Memorandum},
1476     number       = {104538},
1477     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1478     note         = {http://www.gmao.nasa.gov/},
1479    }
1480    
1481    @Article{ks:92,
1482     author       = { Randal D. Koster and Max J. Suarez},
1483     year         = {1992},
1484     title        = { Modeling the Land Surface Boundary
1485    in Climate Models as a Composite of Independent Vegetation Stands.},
1486     journal      = jgr,
1487     volume       = {97},
1488     pages        = {2697-2715}
1489    }
1490    
1491    @Article{lhans:74,
1492     author       = {A. A. Lacis and J. E. Hansen},
1493     year         = {1974},
1494     title        = { A parameterization for the absorption of solar radiation
1495    in the Earth's atmosphere.  },
1496     journal      = jas,
1497     volume       = {31},
1498     pages        = {118-133}
1499    }
1500    
1501    @Article{larpond:81,
1502     author       = {W. G. Large and S. Pond},
1503     year         = {1981},
1504     title        = {Open ocean momentum flux measurements in moderate to strong winds.},
1505     journal      = jpo,
1506     volume       = {11},
1507     pages        = {324-336}
1508    }
1509    
1510    @Article{moorsz:92,
1511     author       = {S. Moorthi and M. J. Suarez},
1512     year         = {1992},
1513     title        = {  Relaxed Arakawa Schubert: A parameterization of moist
1514    convection for general circulation models.},
1515     journal      = mwr,
1516     volume       = {120},
1517     pages        = {978-1002}
1518    }
1519    
1520    @incollection{pano:73,
1521     author       = {H. A. Panofsky},
1522     year         = {1973},
1523     title        = {Tower Micrometeorology. },
1524     booktitle    = {Workshop on Micrometeorology},
1525     editor       = {D. A. Haugen},
1526     publisher    = {American Meteorological Society}
1527    }
1528    
1529    @Article{reynetal:94,
1530     author       = {R. W. Reynolds and T. M. Smith},
1531     year         = {1994},
1532     title        = {Improved global sea surface temperature analyses using optimum interpolation.},
1533     journal      = jclim,
1534     volume       = {7},
1535     pages        = {929-948}
1536    }
1537    
1538    @Article{rosen:87,
1539     author       = {J. E. Rosenfield and M. R. Schoeberl and M. A. Geller},
1540     year         = {1987},
1541     title        = {  A computation of the stratospheric
1542    diabatic circulation using an accurate radiative transfer model},
1543     journal      = jas,
1544     volume       = {44},
1545     pages        = {859-876}
1546    }
1547    
1548    @Article{sudm:88,
1549     author       = {Y. C. Sud and A. Molod},
1550     year         = {1988},
1551     title        = {  The roles of dry convection, cloud-radiation feedback processes
1552    and the influence of recent improvements in the parameterization of convection in the GLA GCM.  },
1553     journal      = mwr,
1554     volume       = {116},
1555     pages        = {2366-2387}
1556    }
1557    
1558    @techreport{taksz:96,
1559     author       = {L. L. Takacs and M.J. Suarez},
1560     year         = {1996},
1561     title        = {  Dynamical aspects of climate simulations Using the GEOS
1562    General Circulation Model},
1563     institution  = {National Aeronautics and Space Administration},
1564     type         = {NASA Technical Memorandum},
1565     number       = {104606 Volume 10},
1566     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1567     note         = {http://www.gmao.nasa.gov/},
1568    }
1569    
1570    @Article{yagkad:74,
1571     author       = {A. M. Yaglom and B. A. Kader},
1572     year         = {1974},
1573     title        = {Heat and mass transfer between a rough wall and
1574    turbulent fluid flow at high Reynolds and Peclet numbers.  },
1575     journal      = jfm,
1576     volume       = {62},
1577     pages        = {601-623}
1578    }
1579    
1580    @Article{yam:77,
1581     author       = {T. Yamada},
1582     year         = {1977},
1583     title        = {  A numerical experiment on pollutant dispersion in a horizontally-homogenious
1584    atmospheric boundary layer.},
1585     journal      = {Atmos. Environ.},
1586     volume       = {11},
1587     pages        = {1015-1024}
1588    }
1589    
1590    @Article{zhouetal:95,
1591     author       = {J. Zhou and Y.C. Sud and K.-M. Lau},
1592     year         = {1995},
1593     title        = {Impact of Orographically Induced Gravity Wave Drag in the GLA GCM},
1594     journal      = qjrms,
1595     volume       = {122},
1596     pages        = {903-927}
1597    }
1598    
1599    @Article{breth:99,
1600     author         = {C. S. Bretherton and M.K. MacVean and P. Bechtold and A. Chlond
1601                       and W.R. Cotton and J. Cuxart and H. Cuijpers and M. Khairoutdinov
1602                       and B. Kosovic and D. Lewellen and C-H. Moeng and P. Siebesma and
1603                       B. Stevens and D.E. Stevens and I. Sykes and M.C. Wyant},
1604     year           = 1999,
1605     title          = {An intercomparison of radiatively driven entrainment and turbulence
1606                      in a smoke cloud, as simulated by different numerical models.},
1607     journal        = qjrms,
1608     volume         = {125},
1609     pages          = {391-423}
1610                      }
1611    
1612    @Article{bm:99,
1613     author         = {A. C. Bushell and G.M. Martin},
1614     year           = 1999,
1615     title          = {The Impact of Vertical Resolution Upon GCM Simulations of Marine Stratocumulus.},
1616     journal        = {Climate Dyn.},
1617     volume         = {15},
1618     pages          = {293-318}
1619                      }
1620    
1621    @Article{Inn:01,
1622     author         = {P. M. Inness and S.J. Slingo and R.B. Woolnough and B. Neale and V.D. Pope},
1623     year           = 2001,
1624     title          = {Organization of Tropical Convection in a GCM with Verying Vertical Resolution;
1625                      Implications for the Simulation of the Madden-Julian Oscillation.},
1626     journal        = {Climate Dyn.},
1627     volume         = {17},
1628     pages          = {777-794}
1629                      }
1630    
1631    @Article{kal:89,
1632     author         = {E. Kalnay and M. Kanamitsu and J. Pfaendtner and J. Sela and M. Suarez and
1633                       J. Stackpole and J. Tucillo and L. Umscheid and and D. Williamson},
1634     year           = 1989,
1635     title          = {Rules for Interchange of Physical Parameterizations.},
1636     journal        = bams,
1637     volume         = {70},
1638     pages          = {620-622}
1639                      }
1640    
1641    @Article{wo:98,
1642     author         = {D. Williamson and J.G. Olsen},
1643     year           = 1998,
1644     title          = {A Comparison of Semi-Langrangian and Eulerian Polar Climate Simulations.},
1645     journal        = mwr,
1646     volume         = {126},
1647     pages          = {991-1000}
1648                      }
1649    @TechReport{MPI-std-20,
1650      author =       {{Message Passing Interface Forum}}},
1651      title =        {{MPI}: A Message-Passing Interface standard (version 2.0)},
1652      institution =  {mpi-forum.org},
1653      year =         {1998},
1654    }
1655    

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