| 1 | @string{arfm    = {Annu.~Rev.~Fluid Mech.}} | @string{arfm    = {Annu.~Rev.~Fluid Mech.}} | 
| 2 | @string{bams    = {Bull.~Am.~Met.~Soc.}} | @string{bams    = {Bull.~Am.~Met.~Soc.}} | 
| 3 | @string{blm     = {Bound.~Layer~Meteorol.}} | @string{blm     = {Bound.~Layer~Meteorol.}} | 
| 4 |  | @string{climd   = {Clim.~Dynamics}} | 
| 5 | @string{jgr     = {J.~Geophys.~Res.}} | @string{jgr     = {J.~Geophys.~Res.}} | 
| 6 | @string{ijrs    = {Int.~J.~Remote Sensing}} | @string{ijrs    = {Int.~J.~Remote Sensing}} | 
| 7 | @string{jas     = {J.~Atmos.~Sci.}} | @string{jas     = {J.~Atmos.~Sci.}} | 
| 11 | @string{jfm     = {J.~Fluid Mech.}} | @string{jfm     = {J.~Fluid Mech.}} | 
| 12 | @string{jaot    = {J.~Atmos.~Ocean.~Technol.}} | @string{jaot    = {J.~Atmos.~Ocean.~Technol.}} | 
| 13 | @string{jms     = {J.~Mar.~Sys.}} | @string{jms     = {J.~Mar.~Sys.}} | 
| 14 |  | @string{om      = {Ocean Modelling}} | 
| 15 | @string{gaos    = {Global Atmos.~Ocean System}} | @string{gaos    = {Global Atmos.~Ocean System}} | 
| 16 | @string{grl     = {Geophys.~Res.~Lett.}} | @string{grl     = {Geophys.~Res.~Lett.}} | 
| 17 | @string{dsr     = {Deep Sea Res.}} | @string{dsr     = {Deep Sea Res.}} | 
| 252 | pages          = {401 pp.}, | pages          = {401 pp.}, | 
| 253 | } | } | 
| 254 |  |  | 
| 255 |  | @incollection{gri:89, | 
| 256 |  | author         = {A. Griewank}, | 
| 257 |  | year           = 1989, | 
| 258 |  | title          = {On automatic differentiation}, | 
| 259 |  | booktitle      = {Mathematical Programming: Recent Developments and | 
| 260 |  | Applications}, | 
| 261 |  | pages          = {83--108}, | 
| 262 |  | editor         = {M. Iri and K. Tanabe}, | 
| 263 |  | publisher      = {Kluwer}, | 
| 264 |  | address        = {Dordrecht, NL}, | 
| 265 |  | } | 
| 266 |  |  | 
| 267 |  | @Article{gri:92, | 
| 268 |  | author =       {A.~Griewank}, | 
| 269 |  | title =        {Achieving logarithmic growth of temporal and spatial | 
| 270 |  | complexity in reverse {A}utomatic {D}ifferentiation}, | 
| 271 |  | journal       = {Optimization Methods and Software}, | 
| 272 |  | year          = {1992}, | 
| 273 |  | volume        = {1}, | 
| 274 |  | pages         = {35--54} | 
| 275 |  | } | 
| 276 |  |  | 
| 277 | @book{gri:00, | @book{gri:00, | 
| 278 | author         = {A. Griewank}, | author         = {A. Griewank}, | 
| 279 | title          = {Evaluating Derivatives. Principles and Techniques | title          = {Evaluating Derivatives. Principles and Techniques | 
| 306 | pages =        {241--248} | pages =        {241--248} | 
| 307 | } | } | 
| 308 |  |  | 
| 309 |  | @Article{held-suar:94, | 
| 310 |  | author         = {I.M. Held and M.J. Suarez}, | 
| 311 |  | year           = {1994}, | 
| 312 |  | title          = {A proposal for the intercomparison of the dynamical cores of atmospheric general circulation models}, | 
| 313 |  | journal        = {Bulletin of the American Meteorological Society}, | 
| 314 |  | volume         = {75(10)}, | 
| 315 |  | pages          = {1825-1830} | 
| 316 |  | } | 
| 317 |  |  | 
| 318 | @Article{hil-eta:01, | @Article{hil-eta:01, | 
| 319 | author         = {C. Hill and M. Follows and V. Bugnion and | author         = {C. Hill and M. Follows and V. Bugnion and | 
| 320 | J. Marshall}, | J. Marshall}, | 
| 321 | year           = {2001}, | year           = {2002}, | 
| 322 | title          = {Spatial and Temporal Impacts of ocean general | title          = {Spatial and Temporal Impacts of ocean general | 
| 323 | circulation on carbon sequestration}, | circulation on carbon sequestration}, | 
| 324 | journal        = {Global Biogeochemical Cycles}, | journal        = {Global Biogeochemical Cycles}, | 
| 325 | note           = {submitted}, | note           = {submitted}, | 
| 326 | } | } | 
| 327 |  |  | 
| 328 |  | @ARTICLE{hib80, | 
| 329 |  | AUTHOR      = "W. D. {Hibler, III}", | 
| 330 |  | TITLE       = "Modeling a Variable Thickness Sea Ice Cover", | 
| 331 |  | JOURNAL     = mwr, | 
| 332 |  | YEAR        = 1980, | 
| 333 |  | VOLUME      = 1, | 
| 334 |  | PAGES       = "1943-1973" | 
| 335 |  | } | 
| 336 |  |  | 
| 337 | @Article{Holland75, | @Article{Holland75, | 
| 338 | author         = {W.R. Holland and L. B. Lin}, | author         = {W.R. Holland and L. B. Lin}, | 
| 339 | year           = {1975a}, | year           = {1975a}, | 
| 516 | volume         = {28}, | volume         = {28}, | 
| 517 | pages          = {215--248}, | pages          = {215--248}, | 
| 518 | } | } | 
| 519 |  |  | 
| 520 |  | %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies | 
| 521 |  | %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997. | 
| 522 |  | %% (Available from Unidata or in PostScript form by anonymous FTP from | 
| 523 |  | %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also | 
| 524 |  | %%   a hypertext version of the User's Guide available at | 
| 525 |  | %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's | 
| 526 |  | %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are | 
| 527 |  | %%   also available. | 
| 528 |  |  | 
| 529 |  | @TechReport{rew:97, | 
| 530 |  | author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies}, | 
| 531 |  | title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90}, | 
| 532 |  | An Interface for Data Access, Version 3}, | 
| 533 |  | institution =  {Unidata Program Center}, | 
| 534 |  | type =         {Report}, | 
| 535 |  | address =      {Boulder, Colorado}, | 
| 536 |  | year =         1997, | 
| 537 |  | note =         {http://www.unidata.ucar.edu/packages/netcdf/}, | 
| 538 |  | } | 
| 539 |  |  | 
| 540 |  |  | 
| 541 | @Article{res-eta:98, | @Article{res-eta:98, | 
| 542 | author         = {J.M. Restrepo and G.K. Leaf and A. Griewank}, | author         = {J.M. Restrepo and G.K. Leaf and A. Griewank}, | 
| 543 | year           = 1998, | year           = 1998, | 
| 779 | } | } | 
| 780 |  |  | 
| 781 | @Article{marshall:97b, | @Article{marshall:97b, | 
| 782 | author =       {Marshall, J., A. Adcroft, C. Hill, L. Perelman, and C. Heise}, | author =       {Marshall, J. and A. Adcroft and C. Hill and L. Perelman and C. Heisey}, | 
| 783 | title =        {A finite-volume, incompressible Navier Stokes model for | title =        {A finite-volume, incompressible Navier Stokes model for | 
| 784 | studies of the ocean on parallel computers}, | studies of the ocean on parallel computers}, | 
| 785 | journal =      {JGR}, | journal =      {JGR}, | 
| 799 | pages =        {2293-2315} | pages =        {2293-2315} | 
| 800 | } | } | 
| 801 |  |  | 
| 802 |  | @Article{adcroft:04a, | 
| 803 |  | author =       {Adcroft, A. and J.-M. Campin}, | 
| 804 |  | title =        {Re-scaled height coordinates for accurate representation | 
| 805 |  | of free-surface flows in ocean circulation models}, | 
| 806 |  | journal =      om, | 
| 807 |  | year =         2004, | 
| 808 |  | volume =       7, | 
| 809 |  | pages =        {269-284} | 
| 810 |  | } | 
| 811 |  |  | 
| 812 |  | @Article{adcroft:04b, | 
| 813 |  | author =       {Adcroft, A. and J.-M. Campin and C. Hill and J. Marshall}, | 
| 814 |  | title =        {Implementation of an Atmosphere-Ocean General Circulation Model | 
| 815 |  | on the Expanded Spherical Cube}, | 
| 816 |  | journal =      mwr, | 
| 817 |  | year =         2004, | 
| 818 |  | volume =       132, | 
| 819 |  | pages =        {2845-2863} | 
| 820 |  | } | 
| 821 |  |  | 
| 822 |  | @Article{marshall:04, | 
| 823 |  | author =       {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White}, | 
| 824 |  | title =        {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms}, | 
| 825 |  | journal =      mwr, | 
| 826 |  | year =         2004, | 
| 827 |  | volume =       132, | 
| 828 |  | pages =        {2882-2894} | 
| 829 |  | } | 
| 830 |  |  | 
| 831 | @Article{visbeck:97, | @Article{visbeck:97, | 
| 832 | author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall}, | author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall}, | 
| 833 | title =        {Specification of eddy transfer coefficients in | title =        {Specification of eddy transfer coefficients in | 
| 853 | } | } | 
| 854 |  |  | 
| 855 | @Article{marshall:98, | @Article{marshall:98, | 
| 856 | author =       {Marshall, J., Jones, H. and C. Hill}, | author =       {J. Marshall and H. Jones and C. Hill}, | 
| 857 | title =        {Efficient ocean modeling using non-hydrostatic algorithms}, | title =        {Efficient ocean modeling using non-hydrostatic algorithms}, | 
| 858 | journal =      {JMR}, | journal =      {JMR}, | 
| 859 | year =         1998, | year =         1998, | 
| 895 | author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall}, | author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall}, | 
| 896 | title =        {A Strategy for Terascale Climate Modeling}, | title =        {A Strategy for Terascale Climate Modeling}, | 
| 897 | booktitle =    {In Proceedings of the Eighth ECMWF Workshop on the Use of Parallel Processors in Meteorology}, | booktitle =    {In Proceedings of the Eighth ECMWF Workshop on the Use of Parallel Processors in Meteorology}, | 
| 898 | year =         1999 | year =         1999, | 
| 899 |  | pages = {406-425}, | 
| 900 |  | publisher =    {World Scientific}, | 
| 901 | } | } | 
| 902 |  |  | 
| 903 | @Article{wardle:00, | @Article{wardle:00, | 
| 914 | author =       {Adcroft, A. and J.-M. Campin}, | author =       {Adcroft, A. and J.-M. Campin}, | 
| 915 | title =        {Comparison of finite volume schemes and direct-space-time | title =        {Comparison of finite volume schemes and direct-space-time | 
| 916 | methods for ocean circulation models}, | methods for ocean circulation models}, | 
| 917 | journal =      {OM}, | journal =      om, | 
| 918 | year =         2002, | year =         2002, | 
| 919 | note =         {in preparation} | note =         {in preparation} | 
| 920 | } | } | 
| 922 | @Article{adcroft:02, | @Article{adcroft:02, | 
| 923 | author =       {Adcroft et al.}, | author =       {Adcroft et al.}, | 
| 924 | title =        {Energy conversion in discrete numerical models}, | title =        {Energy conversion in discrete numerical models}, | 
| 925 | journal =      {OM}, | journal =      om, | 
| 926 | year =         2002, | year =         2002, | 
| 927 | note =         {in preparation} | note =         {in preparation} | 
| 928 | } | } | 
| 980 | } | } | 
| 981 |  |  | 
| 982 | @Article{campin:02, | @Article{campin:02, | 
| 983 | author =       {Campin et al.}, | author =       {Campin, J.-M. and A. Adcroft and C. Hill and J. Marshall}, | 
| 984 | title =        {Conservation of properties in a free-surface model}, | title =        {Conservation of properties in a free-surface model}, | 
| 985 | journal =      {OM}, | journal =      om, | 
| 986 | year =         2002, | year =         2004, | 
| 987 | note =         {in preparation} | volume =       6, | 
| 988 |  | pages =        {221-244} | 
| 989 | } | } | 
| 990 |  |  | 
| 991 | @Article{dm:95, | @Article{dm:95, | 
| 1019 | pages =        {1682-1700} | pages =        {1682-1700} | 
| 1020 | } | } | 
| 1021 |  |  | 
| 1022 | @Article{roe:85, | @incollection{roe:85, | 
| 1023 | author =       {Roe, P.L.}, | author         = {P.L. Roe}, | 
| 1024 | title =        {Some contributions to the modeling of discontinuous flows}, | year           = 1985, | 
| 1025 | journal =      {Lect. Notes Appl. Math.}, | title          = {Some contributions to the modelling of discontinuous flows}, | 
| 1026 | year =         1985, | booktitle      = {Large-Scale Computations in Fluid Mechanics}, | 
| 1027 | volume =       22, | series         = {Lectures in Applied Mathematics}, | 
| 1028 | pages =        {163-193} | volume         = 22, | 
| 1029 |  | pages          = {163-193}, | 
| 1030 |  | editor         = {B.E. Engquist and S. Osher and R.C.J. Somerville}, | 
| 1031 |  | publisher      = {American Mathematical Society}, | 
| 1032 |  | address        = {Providence, RI}, | 
| 1033 |  | } | 
| 1034 |  |  | 
| 1035 |  | @Article{trenberth90, | 
| 1036 |  | author =       {K. M. Trenberth and J. Olson and W. G. Large}, | 
| 1037 |  | title =        {The Mean Annual Cycle in {G}lobal {O}cean Wind | 
| 1038 |  | Stress}, | 
| 1039 |  | journal =      jpo, | 
| 1040 |  | year =         1990, | 
| 1041 |  | volume =       20, | 
| 1042 |  | pages =        {1742--1760} | 
| 1043 |  | } | 
| 1044 |  |  | 
| 1045 |  | @Article{molteni:03, | 
| 1046 |  | author =       {K. M. Trenberth and J. Olson and W. G. Large}, | 
| 1047 |  | title =        {Atmospheric simulations using a GCM with simplified physical | 
| 1048 |  | parametrization, I model climatology and variability in | 
| 1049 |  | multidecadal experiments}, | 
| 1050 |  | journal =      climd, | 
| 1051 |  | year =         2003, | 
| 1052 |  | volume =       20, | 
| 1053 |  | pages =        {175--191} | 
| 1054 |  | } | 
| 1055 |  |  | 
| 1056 |  | @Article{jiang99, | 
| 1057 |  | author =       {Shi Jiang and Peter H. Stone and Paola | 
| 1058 |  | Malanotte-Rizzoli}, | 
| 1059 |  | title =        {An Assessment of the {G}eophysical {F}luid | 
| 1060 |  | {D}ynamics {L}aboratory Ocean Model with Coarse | 
| 1061 |  | Resolution: Annual-Mean Climatology}, | 
| 1062 |  | journal =      jgr, | 
| 1063 |  | year =         1999, | 
| 1064 |  | volume =       104, | 
| 1065 |  | number =       {C11}, | 
| 1066 |  | pages =        {25,623--25,645} | 
| 1067 |  | } | 
| 1068 |  |  | 
| 1069 |  | @Article{szoeke02, | 
| 1070 |  | author =       {de Szoeke, Roland A. and Roger M. Samelson}, | 
| 1071 |  | title =        {The Duality between the {B}oussinesq and | 
| 1072 |  | {N}on-{B}oussinesq Hydrostatic Equations of Motion}, | 
| 1073 |  | journal =      jpo, | 
| 1074 |  | year =         2002, | 
| 1075 |  | volume =       32, | 
| 1076 |  | number =       8, | 
| 1077 |  | pages =        {2194--2203} | 
| 1078 |  | } | 
| 1079 |  |  | 
| 1080 |  | @Article{jackett95, | 
| 1081 |  | author =       {David R. Jackett and Trevor J. McDougall}, | 
| 1082 |  | title =        {Minimal Adjustment of Hydrographic Profiles to | 
| 1083 |  | Achieve Static Stability}, | 
| 1084 |  | journal =      jaot, | 
| 1085 |  | year =         1995, | 
| 1086 |  | volume =       12, | 
| 1087 |  | number =       4, | 
| 1088 |  | pages =        {381--389} | 
| 1089 |  | } | 
| 1090 |  |  | 
| 1091 |  | @Article{mcdougall03, | 
| 1092 |  | author =       {Trevor J. McDougall and David R. Jackett and Daniel | 
| 1093 |  | G. Wright and Rainer Feistel}, | 
| 1094 |  | title =        {Accurate and Computationally Efficient Algorithms | 
| 1095 |  | for Potential Temperature and Density of Seawater}, | 
| 1096 |  | journal =      jaot, | 
| 1097 |  | year =         {2003}, | 
| 1098 |  | OPTkey =       {}, | 
| 1099 |  | OPTvolume =    {}, | 
| 1100 |  | OPTnumber =    {}, | 
| 1101 |  | OPTpages =     {}, | 
| 1102 |  | OPTmonth =     {}, | 
| 1103 |  | OPTnote =      {{\textup{In press}}}, | 
| 1104 |  | OPTannote =    {} | 
| 1105 |  | } | 
| 1106 |  |  | 
| 1107 |  | @TechReport{fofonoff83, | 
| 1108 |  | author =       "Fofonoff, P. and Millard, Jr., R.C.", | 
| 1109 |  | title =        "Algorithms for Computation of Fundamental Properties | 
| 1110 |  | of Seawater", | 
| 1111 |  | institution =  "Unesco", | 
| 1112 |  | year =         1983, | 
| 1113 |  | type =         "Unesco Technical Papers in Marine Science", | 
| 1114 |  | number =       44, | 
| 1115 |  | pages =        {53 pp.} | 
| 1116 |  | } | 
| 1117 |  |  | 
| 1118 |  | @ARTICLE{zha98a, | 
| 1119 |  | AUTHOR      = "J. Zhang and W. D. {Hibler, III} and M. Steele | 
| 1120 |  | and D. A. Rothrock", | 
| 1121 |  | TITLE       = "Arctic ice-ocean modeling with and without climate restoring", | 
| 1122 |  | JOURNAL     = jpo, | 
| 1123 |  | YEAR        = 1998, | 
| 1124 |  | VOLUME      = 28, | 
| 1125 |  | PAGES       = "191-217" | 
| 1126 |  | } | 
| 1127 |  |  | 
| 1128 |  | @ARTICLE{sem76, | 
| 1129 |  | AUTHOR      = "Semtner, Jr., Albert J.", | 
| 1130 |  | TITLE       = "A model for the thermodynamic growth of sea ice in | 
| 1131 |  | numerical investigations of climate", | 
| 1132 |  | JOURNAL     = jpo, | 
| 1133 |  | YEAR        = 1976, | 
| 1134 |  | VOLUME      = 6, | 
| 1135 |  | PAGES       = "379-389" | 
| 1136 |  | } | 
| 1137 |  |  | 
| 1138 |  | @ARTICLE{win00, | 
| 1139 |  | AUTHOR      = "M. Winton", | 
| 1140 |  | TITLE       = "A reformulated three-layer sea ice model", | 
| 1141 |  | JOURNAL     = jaot, | 
| 1142 |  | YEAR        = 2000, | 
| 1143 |  | VOLUME      = 17, | 
| 1144 |  | PAGES       = "525-531" | 
| 1145 |  | } | 
| 1146 |  |  | 
| 1147 |  | @ARTICLE{hib79, | 
| 1148 |  | AUTHOR      = "W. D. {Hibler, III}", | 
| 1149 |  | TITLE       = "A Dynamic Thermodynamic Sea Ice Model", | 
| 1150 |  | JOURNAL     = jpo, | 
| 1151 |  | YEAR        = 1979, | 
| 1152 |  | VOLUME      = 9, | 
| 1153 |  | PAGES       = "815-846" | 
| 1154 |  | } | 
| 1155 |  |  | 
| 1156 |  | @ARTICLE{fla92, | 
| 1157 |  | AUTHOR      = "G. M. Flato and W. D. {Hibler, III}", | 
| 1158 |  | TITLE       = "Modeling pack ice as a cavitating fluid", | 
| 1159 |  | JOURNAL     = jpo, | 
| 1160 |  | YEAR        = 1992, | 
| 1161 |  | VOLUME      = 22, | 
| 1162 |  | PAGES       = "626-651" | 
| 1163 |  | } | 
| 1164 |  |  | 
| 1165 |  | @ARTICLE{hun97, | 
| 1166 |  | AUTHOR      = "E. C. Hunke and J. K. Dukowicz", | 
| 1167 |  | TITLE       = "An elastic-viscous-plastic model for sea ice dynamics", | 
| 1168 |  | JOURNAL     = jpo, | 
| 1169 |  | YEAR        = 1997, | 
| 1170 |  | VOLUME      = 27, | 
| 1171 |  | PAGES       = "1849-1867" | 
| 1172 |  | } | 
| 1173 |  |  | 
| 1174 |  | @ARTICLE{zha00, | 
| 1175 |  | AUTHOR      = "Jinlun Zhang and Drew Rothrock", | 
| 1176 |  | TITLE       = "Modeling Arctic Sea Ice with an Efficient Plastic Solution", | 
| 1177 |  | JOURNAL     = jgr, | 
| 1178 |  | YEAR        = 2000, | 
| 1179 |  | VOLUME      = 105, | 
| 1180 |  | PAGES       = "3325-3338" | 
| 1181 |  | } | 
| 1182 |  |  | 
| 1183 |  | @Article{Shapiro_70, | 
| 1184 |  | author =       {Shapiro, R.}, | 
| 1185 |  | title =        {Smoothing, filtering, and boundary effects}, | 
| 1186 |  | journal =      {Reviews of Geophysics and Space Physics}, | 
| 1187 |  | year =         {1970}, | 
| 1188 |  | volume =       {8}, | 
| 1189 |  | number =       {2}, | 
| 1190 |  | pages =        {359--387}, | 
| 1191 | } | } | 
| 1192 |  |  |