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revision 1.9 by cnh, Wed Nov 21 14:13:17 2001 UTC revision 1.47 by mlosch, Mon Mar 31 11:26:49 2014 UTC
# Line 1  Line 1 
1    @string{angl    = {Ann.\ Glaciol.}}
2  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}
3  @string{bams    = {Bull.~Am.~Met.~Soc.}}  @string{bams    = {Bull.~Am.~Met.~Soc.}}
4  @string{blm     = {Bound.~Layer~Meteorol.}}  @string{blm     = {Bound.~Layer~Meteorol.}}
5    @string{climd   = {Clim.~Dynamics}}
6    @string{cch     = {Clim.\ Change}}
7  @string{jgr     = {J.~Geophys.~Res.}}  @string{jgr     = {J.~Geophys.~Res.}}
8  @string{ijrs    = {Int.~J.~Remote Sensing}}  @string{ijrs    = {Int.~J.~Remote Sensing}}
9  @string{jas     = {J.~Atmos.~Sci.}}  @string{jas     = {J.~Atmos.~Sci.}}
10    @string{jam     = {J.~Appl.~Meteor.}}
11  @string{jpo     = {J.~Phys.~Oceanogr.}}  @string{jpo     = {J.~Phys.~Oceanogr.}}
12  @string{jclim   = {J.~Clim.}}  @string{jclim   = {J.~Clim.}}
13    @string{jcp     = {J.~Comput.~Phys.}}
14  @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}  @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}
15  @string{jfm     = {J.~Fluid Mech.}}  @string{jfm     = {J.~Fluid Mech.}}
16  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}
17  @string{jms     = {J.~Mar.~Sys.}}  @string{jms     = {J.~Mar.~Sys.}}
18    @string{om      = {Ocean Modelling}}
19  @string{gaos    = {Global Atmos.~Ocean System}}  @string{gaos    = {Global Atmos.~Ocean System}}
20  @string{grl     = {Geophys.~Res.~Lett.}}  @string{grl     = {Geophys.~Res.~Lett.}}
21  @string{dsr     = {Deep Sea Res.}}  @string{dsr     = {Deep Sea Res.}}
# Line 28  Line 34 
34  @string{estec   = {European Space Research and Technology Centre  @string{estec   = {European Space Research and Technology Centre
35                          (ESTEC)}}                          (ESTEC)}}
36  @string{esa     = {European Space Agency (ESA)}}  @string{esa     = {European Space Agency (ESA)}}
37    @string{eos     = {Eos~Trans.\ AGU}}
38    @string{siscicom= {SIAM J.\ Sci.\ Comput.}}
39    
40  @Article{bis-eta:92,  @Article{bis-eta:92,
41   author         = {C.H. Bishof and G.F. Corliss and L. Green and   author         = {C.H. Bishof and G.F. Corliss and L. Green and
# Line 39  Line 47 
47   volume         = {3},   volume         = {3},
48   pages          = {625--638},   pages          = {625--638},
49                    }                    }
50    
51  @incollection{bis:94,  @incollection{bis:94,
52   author         = {C.H. Bishof},   author         = {C.H. Bishof},
53   year           = 1994,   year           = 1994,
# Line 52  Line 60 
60   publisher      = {Kluwer},   publisher      = {Kluwer},
61   address        = {Dordrecht, NL},   address        = {Dordrecht, NL},
62                    }                    }
63    
64  @techreport{bis-eta:94,  @techreport{bis-eta:94,
65   author         = {C. Bishof and A. Carle and P. Khademi and   author         = {C. Bishof and A. Carle and P. Khademi and
66                    A. Maurer},                    A. Maurer},
# Line 63  Line 71 
71                    Computer Science Division},                    Computer Science Division},
72   type           = {Argonne Preprint},   type           = {Argonne Preprint},
73   number         = {ANL-MCS-P981-1194},   number         = {ANL-MCS-P981-1194},
74   address        = {ANL; 9700 South Cass Ave.;   address        = {ANL; 9700 South Cass Ave.;
75                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
76   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
77                    }                    }
78    
79    @ARTICLE{bryan:84,
80      author = {Kirk Bryan},
81      title = {Accelerating the convergence to equilibrium of Ocean-Climate Models},
82      journal = jpo,
83      year = {1984},
84      volume = {14},
85      number = {4},
86      pages = {666-673},
87    }
88    
89    @ARTICLE{bugi-hill:06,
90      author = {V. Bugnion and C. Hill},
91      title = {Equilibration mechanisms in an adjoint ocean general
92               circulation model},
93      journal = {Ocean Dynamics},
94      year = {2006},
95      volume = {56},
96      number = {1},
97      pages = {51-61},
98      doi   = {10.1007/s10236-005-0052-z},
99    }
100    
101  @techreport{bis-roh:97,  @techreport{bis-roh:97,
102   author         = {C. Bishof and L. Roh},   author         = {C. Bishof and L. Roh},
103   year           = 1997,   year           = 1997,
# Line 77  Line 107 
107                    Computer Science Division},                    Computer Science Division},
108   type           = {Argonne Preprint},   type           = {Argonne Preprint},
109   number         = {ANL-MCS-P626-1196},   number         = {ANL-MCS-P626-1196},
110   address        = {ANL; 9700 South Cass Ave.;   address        = {ANL; 9700 South Cass Ave.;
111                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
112   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
113                    }                    }
114    
115  @Article{cou-tal:87,  @Article{cou-tal:87,
116   author         = {P. Courtier and O. Talagrand},   author         = {P. Courtier and O. Talagrand},
117   year           = 1987,   year           = 1987,
118   title          = {Variational assimilation of meteorological   title          = {Variational assimilation of meteorological
119                    observations with the adjoint vorticity equation.                    observations with the adjoint vorticity equation.
120                    II: Numerical results},                    II: Numerical results},
121   journal        = qjrms,   journal        = qjrms,
122   volume         = {113},   volume         = {113},
123   pages          = {1329--1347},   pages          = {1329--1347},
124                    }                    }
125    
126  @Article{cou-tal:90,  @Article{cou-tal:90,
127   author         = {P. Courtier and O. Talagrand},   author         = {P. Courtier and O. Talagrand},
128   year           = 1990,   year           = 1990,
# Line 103  Line 133 
133   volume         = {42A},   volume         = {42A},
134   pages          = {531--549},   pages          = {531--549},
135                    }                    }
136    
137  @Article{cou-eta:94,  @Article{cou-eta:94,
138   author         = {P. Courtier and J.-N. Th{\'e}paut and   author         = {P. Courtier and J.-N. Th{\'e}paut and
139                    A. Hollingsworth},                    A. Hollingsworth},
# Line 114  Line 144 
144   volume         = {120},   volume         = {120},
145   pages          = {1367--1387},   pages          = {1367--1387},
146                    }                    }
147    
148    @ARTICLE{durr:91,
149      author = {Dale R. Durran},
150      title = {The Third-Order Adams-Bashforth Method: An Attractive Alternative
151               to Leapfrog Time Differencing},
152      journal = mwr,
153      year = {1991},
154      volume = {119},
155      pages  = {702-720},
156    }
157    
158    
159    @ARTICLE{dutk-etal:06,
160      author = {S. Dutkiewicz and M.J. Follows and P. Heimbach and J. Marshall},
161      title = {Controls on ocean productivity and air-sea carbon flux:
162               An adjoint model sensitivity study},
163      journal = grl,
164      year = {2006},
165      volume = {33},
166      pages  = {L02603},
167      doi    = {10.1029/2005GL024987},
168    }
169    
170  @Article{err:97,  @Article{err:97,
171   author         = {R.M. Errico},   author         = {R.M. Errico},
172   year           = 1997,   year           = 1997,
# Line 123  Line 175 
175   volume         = {78},   volume         = {78},
176   pages          = {2577--2591},   pages          = {2577--2591},
177                    }                    }
178    
179  @Article{far-moo:92,  @Article{far-moo:92,
180   author         = {B.F. Farrell and A.M. Moore},   author         = {B.F. Farrell and A.M. Moore},
181   year           = {1992},   year           = {1992},
# Line 133  Line 185 
185   volume         = {22},   volume         = {22},
186   pages          = {338--349},   pages          = {338--349},
187                    }                    }
188    
189  @Article{far-ioa:96a,  @Article{far-ioa:96a,
190   author         = {B.F. Farrell and P. Ioannou},   author         = {B.F. Farrell and P. Ioannou},
191   year           = {1996a},   year           = {1996a},
# Line 143  Line 195 
195   volume         = {53},   volume         = {53},
196   pages          = {2025--2040},   pages          = {2025--2040},
197                    }                    }
198    
199  @Article{far-ioa:96b,  @Article{far-ioa:96b,
200   author         = {B.F. Farrell and P. Ioannou},   author         = {B.F. Farrell and P. Ioannou},
201   year           = {1996b},   year           = {1996b},
# Line 153  Line 205 
205   volume         = {53},   volume         = {53},
206   pages          = {2041--2053},   pages          = {2041--2053},
207                    }                    }
208    
209  @techreport{fau-pap:98,  @techreport{fau-pap:98,
210   author         = {C. Faure and Y. Papegay},   author         = {C. Faure and Y. Papegay},
211   year           = 1998,   year           = 1998,
# Line 166  Line 218 
218                    06902 Sophia Antipolis Cedex; France},                    06902 Sophia Antipolis Cedex; France},
219   note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},   note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},
220                    }                    }
221    
222  @Article{fau:00,  @Article{fau:00,
223   author         = {C. Faure},   author         = {C. Faure},
224   year           = {2000},   year           = {2000},
# Line 174  Line 226 
226   journal        = {Optimisation Methods and Software},   journal        = {Optimisation Methods and Software},
227   note           = {in press},   note           = {in press},
228                    }                    }
229    
230    @Article{fer-eta:05,
231     author         = {D. Ferreira and J. Marshall and P. Heimbach},
232     year           = 2005,
233     title          = {Estimating Eddy Stresses by Fitting Dynamics to Observations
234                       using a Residual-Mean Ocean Circulation Model and Its Adjoint},
235     journal        = jpo,
236     volume         = {35},
237     pages          = {1891--1910},
238                      }
239    
240    @Article{gas-eta:90,
241     author         = {P. Gaspar and Y. Gr\'egoris and J.-M. Lefevre},
242     year           = 1990,
243     title          = {A Simple Eddy Kinetic Energy Model for Simulations of the
244                       Oceanic Vertical Mixing: Tests at Station Papa and Long-Term
245                       Upper Ocean Study Site},
246     journal        = jgr,
247     volume         = {95 (C9)},
248     pages          = {16,179--16,193},
249                      }
250    
251  @Article{gen-mcw:90,  @Article{gen-mcw:90,
252   author         = {P.R. Gent and J.C. McWilliams},   author         = {P. R. Gent and J. C. McWilliams},
253   year           = 1990,   year           = 1990,
254   title          = {Isopycnal mixing in ocean circulation models},   title          = {Isopycnal mixing in ocean circulation models},
255   journal        = jpo,   journal        = jpo,
256   volume         = {20},   volume         = {20},
257   pages          = {150--155},   pages          = {150--155},
258                    }                    }
259    
260  @Article{gen-eta:95,  @Article{gen-eta:95,
261   author         = {P.R. Gent and J. Willebrand and T.J. McDougall   author         = {P. R. Gent and J. Willebrand and T. J. McDougall and J. C. McWilliams},
                   and J.C. McWilliams},  
262   year           = 1995,   year           = 1995,
263   title          = {Parameterizing eddy-induced tracer transports in   title          = {Parameterizing eddy-induced tracer transports in ocean circulation models},
                   ocean circulation models},  
264   journal        = jpo,   journal        = jpo,
265   volume         = {25},   volume         = {25},
266   pages          = {463--474},   pages          = {463--474},
267                    }                    }
268    
269  @Article{gie-kam:98,  @Article{gie-kam:98,
270   author         = {R. Giering and T. Kaminski},   author         = {R. Giering and T. Kaminski},
271   year           = 1998,   year           = 1998,
# Line 207  Line 278 
278  @techreport{gie:99,  @techreport{gie:99,
279   author         = {R. Giering},   author         = {R. Giering},
280   year           = 1999,   year           = 1999,
281   title          = {Tangent linear and Adjoint Model Compiler.   title          = {Tangent linear and Adjoint Model Compiler.
282                    Users manual 1.4 (TAMC Version 5.2)},                    Users manual 1.4 (TAMC Version 5.2)},
283   institution    = {Massachusetts Institute of Technology},   institution    = {Massachusetts Institute of Technology},
284   type           = {Report},   type           = {Report},
# Line 216  Line 287 
287                    02139; USA},                    02139; USA},
288   note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},   note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},
289                    }                    }
290    
291  @incollection{gie:00,  @incollection{gie:00,
292   author         = {R. Giering},   author         = {R. Giering},
293   editor         = {P. Kasibhatla and M. Heimann and P. Rayner and   editor         = {P. Kasibhatla and M. Heimann and P. Rayner and
# Line 240  Line 311 
311   volume         = {45},   volume         = {45},
312   pages          = {407--435},   pages          = {407--435},
313                    }                    }
314    
315  @book{gil-eta:81,  @book{gil-eta:81,
316   author         = {P.E. Gill and W. Murray and M.H. Wright},   author         = {P.E. Gill and W. Murray and M.H. Wright},
317   title          = {Practical optimization},   title          = {Practical optimization},
318   year           = 1981,   year           = 1981,
319   publisher      = {Academic Press},   publisher      = {Academic Press},
320   address        = {London},   address        = {London},
321   pages          = {401 pp.},   pages          = {401 pp.},
322                    }                    }
323                                                                      
324    @incollection{gri:89,
325     author         = {A. Griewank},
326     year           = 1989,
327     title          = {On automatic differentiation},
328     booktitle      = {Mathematical Programming: Recent Developments and
329                      Applications},
330     pages          = {83--108},
331     editor         = {M. Iri and K. Tanabe},
332     publisher      = {Kluwer},
333     address        = {Dordrecht, NL},
334                      }
335    
336    @Article{gri:92,
337      author =       {A.~Griewank},
338      title =        {Achieving logarithmic growth of temporal and spatial
339      complexity in reverse {A}utomatic {D}ifferentiation},
340      journal       = {Optimization Methods and Software},
341      year          = {1992},
342      volume        = {1},
343      pages         = {35--54}
344    }
345    
346  @book{gri:00,  @book{gri:00,
347   author         = {A. Griewank},   author         = {A. Griewank},
348   title          = {Evaluating Derivatives. Principles and Techniques   title          = {Evaluating Derivatives. Principles and Techniques
# Line 258  Line 351 
351   series         = {Frontiers in Applied Mathematics},   series         = {Frontiers in Applied Mathematics},
352   volume         = {19},   volume         = {19},
353   publisher      = {SIAM},   publisher      = {SIAM},
354   address        = {Philadelphia},   address        = {Philadelphia},
355   pages          = {369 pp.},   pages          = {369 pp.},
356                    }                    }
357                                                                      
358  @Article{hal-eta:82,  @Article{hal-eta:82,
359   author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},   author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},
360   year           = 1982,   year           = 1982,
# Line 281  Line 374 
374    volume =       1,    volume =       1,
375    pages =        {241--248}    pages =        {241--248}
376  }  }
377    
378    @Article{held-suar:94,
379     author         = {I.M. Held and M.J. Suarez},
380     year           = {1994},
381     title          = {A proposal for the intercomparison of the dynamical cores of atmospheric general circulation models},
382     journal        = {Bulletin of the American Meteorological Society},
383     volume         = {75(10)},
384     pages          = {1825-1830}
385    }
386    
387  @Article{hil-eta:01,  @Article{hil-eta:01,
388   author         = {C. Hill and M. Follows and V. Bugnion and   author         = {C. Hill and M. Follows and V. Bugnion and
389                    J. Marshall},                    J. Marshall},
390   year           = {2001},   year           = {2002},
391   title          = {Spatial and Temporal Impacts of ocean general   title          = {Spatial and Temporal Impacts of ocean general
392                    circulation on carbon sequestration},                    circulation on carbon sequestration},
393   journal        = {Global Biogeochemical Cycles},   journal        = {Global Biogeochemical Cycles},
394   note           = {submitted},   note           = {submitted},
395                    }                    }
396    
397    @ARTICLE{hib80,
398      author =       {Hibler, III, William D.},
399      TITLE       = "Modeling a Variable Thickness Sea Ice Cover",
400      JOURNAL     = mwr,
401      YEAR        = 1980,
402      VOLUME      = 1,
403      PAGES       = "1943-1973"
404    }
405    
406  @Article{Holland75,  @Article{Holland75,
407   author         = {W.R. Holland and L. B. Lin},   author         = {W.R. Holland and L. B. Lin},
408   year           = {1975a},   year           = {1975a},
409   title          = {On the origin of mesoscale eddies and their contribution   title          = {On the origin of mesoscale eddies and their contribution
410                     to the general circulation of the ocean. I. A preliminary                     to the general circulation of the ocean. I. A preliminary
411                     numerical experiment},                     numerical experiment},
412   journal        = jpo,   journal        = jpo,
413   volume         = {5},   volume         = {5},
# Line 306  Line 417 
417  @Article{hol-lin:75b,  @Article{hol-lin:75b,
418   author         = {W.R. Holland and L. B. Lin},   author         = {W.R. Holland and L. B. Lin},
419   year           = {1975b},   year           = {1975b},
420   title          = {On the origin of mesoscale eddies and their contribution   title          = {On the origin of mesoscale eddies and their contribution
421                     to the general circulation of the ocean. II. A parameter                     to the general circulation of the ocean. II. A parameter
422                     study},                     study},
423   journal        = jpo,   journal        = jpo,
# Line 314  Line 425 
425   pages          = {658-669}   pages          = {658-669}
426                    }                    }
427    
428    @Article{jam-oze:86,
429     author         = {B.M. Jamart and J. Ozer},
430     year           = {1986},
431     title          = {Numerical boundary layers and spurious residual flows},
432     journal        = jgr,
433     volume         = {91},
434     pages          = {10,621-10,631}
435                      }
436    
437  @book{kas-eta:00,  @book{kas-eta:00,
438   author         = {P. Kasibhatla and M. Heimann and P. Rayner and   author         = {P. Kasibhatla and M. Heimann and P. Rayner and
439                    N. Mahowald and R.G. Prinn and D.E. Hartley},                    N. Mahowald and R.G. Prinn and D.E. Hartley},
# Line 329  Line 449 
449  @Article{lar-eta:94,  @Article{lar-eta:94,
450   author         = {W.G. Large and J.C. McWilliams and S.C. Doney},   author         = {W.G. Large and J.C. McWilliams and S.C. Doney},
451   year           = 1994,   year           = 1994,
452   title          = {Oceanic vertical mixing: A review and a model   title          = {Oceanic vertical mixing: A review and a model with nonlocal boundary layer parameterization},
                   with nonlocal boundary layer parameterization},  
453   journal        = {Rev.~Geophys.},   journal        = {Rev.~Geophys.},
454   volume         = {32},   volume         = {32},
455   pages          = {363--403},   pages          = {363--403},
456                    }                    }
457    
458  @Article{lar-eta:97,  @Article{lar-eta:97,
459   author         = {W.G. Large and G. Danabasoglu and S.C. Doney   author         = {W. G. Large and G. Danabasoglu and S. C. Doney
460                    and J.C. McWilliams},                    and J. C. McWilliams},
461   year           = 1997,   year           = 1997,
462   title          = {Sensitivity to surface forcing and boundary layer   title          = {Sensitivity to surface forcing and boundary layer
463                    mixing in a global ocean model: annual-mean                    mixing in a global ocean model: Annual-mean climatology},
                   climatology},  
464   journal        = jpo,   journal        = jpo,
465   volume         = {27},   volume         = {27},
466     number         = 11,
467   pages          = {2418--2447},   pages          = {2418--2447},
468                    }                    }
469    
470  @Article{led-tal:86,  @Article{led-tal:86,
471   author         = {F.-X. {Le Dimet} and O. Talagrand},   author         = {F.-X. {Le Dimet} and O. Talagrand},
472   year           = 1986,   year           = 1986,
# Line 388  Line 507 
507    OPTannote =    {}    OPTannote =    {}
508  }  }
509    
510    
511  @Article{lew-der:85,  @Article{lew-der:85,
512   author         = {J. Lewis and J. Derber},   author         = {J. Lewis and J. Derber},
513   year           = {1985},   year           = {1985},
# Line 398  Line 517 
517   volume         = {37A},   volume         = {37A},
518   pages          = {309--322},   pages          = {309--322},
519                    }                    }
520    
521  @techreport{lon:88,  @techreport{lon:88,
522   author         = {R.B. Long},   author         = {R.B. Long},
523   year           = 1988,   year           = 1988,
# Line 410  Line 529 
529   pages          = {38 pp.},   pages          = {38 pp.},
530   address        = {Delft (NL)},   address        = {Delft (NL)},
531                    }                    }
532    
533    @ARTICLE{losc-heim:06,
534      author =       {Martin Losch and Patrick Heimbach},
535      title =        {Adjoint Sensitivity of an Ocean General Circulation
536                      Model to Bottom Topography},
537      journal =      jpo,
538      year =         2007,
539      volume =       37,
540      doi =          {10.1175/JPO3017.1},
541      number =       2,
542      pages =        {377--393},
543      url    = {http://mitgcm.org/pdfs/Los2006a.pdf},
544    }
545    
546    
547  @Article{maro-wun:93,  @Article{maro-wun:93,
548   author         = {J. Marotzke and C. Wunsch},   author         = {J. Marotzke and C. Wunsch},
549   year           = 1993,   year           = 1993,
# Line 421  Line 554 
554   volume         = {98, C11},   volume         = {98, C11},
555   pages          = {20,149--20,167},   pages          = {20,149--20,167},
556                    }                    }
557    
558  @Article{maro-eta:99,  @Article{maro-eta:99,
559   author         = {J. Marotzke and R. Giering and K.Q. Zhang and   author         = {J. Marotzke and R. Giering and K.Q. Zhang and
560                    D. Stammer and C. Hill and T. Lee},                    D. Stammer and C. Hill and T. Lee},
561   year           = 1999,   year           = 1999,
562   title          = {Construction of the adjoint MIT ocean general   title          = {Construction of the adjoint MIT ocean general
# Line 433  Line 566 
566   volume         = {104, C12},   volume         = {104, C12},
567   pages          = {29,529--29,547},   pages          = {29,529--29,547},
568                    }                    }
569    
570  @Article{mars-eta:97a,  @Article{mars-eta:97a,
571   author         = {J. Marshall and C. Hill and L. Perelman and   author         = {J. Marshall and C. Hill and L. Perelman and
572                    A. Adcroft},                    A. Adcroft},
# Line 444  Line 577 
577   volume         = {102, C3},   volume         = {102, C3},
578   pages          = {5,733--5,752},   pages          = {5,733--5,752},
579                    }                    }
580    
581  @Article{mars-eta:97b,  @Article{mars-eta:97b,
582   author         = {J. Marshall and A. Adcroft and C. Hill and   author         = {J. Marshall and A. Adcroft and C. Hill and
583                    L. Perelman and C. Heisey},                    L. Perelman and C. Heisey},
584   year           = {1997b},   year           = {1997b},
585   title          = {Hydrostatic, quasi-hydrostatic and   title          = {Hydrostatic, quasi-hydrostatic and
# Line 455  Line 588 
588   volume         = {102, C3},   volume         = {102, C3},
589   pages          = {5,753--5,766},   pages          = {5,753--5,766},
590                    }                    }
591    
592  @Article{mars-sha:98,  @Article{mars-eta:98,
593   author         = {J. Marshall and H. Jones and C. Hill},   author         = {J. Marshall and H. Jones and C. Hill},
594   year           = 1998,   year           = 1998,
595   title          = {Efficient ocean modeling using   title          = {Efficient ocean modeling using
# Line 464  Line 597 
597   journal        = jms,   journal        = jms,
598   volume         = {18},   volume         = {18},
599   pages          = {115--134},   pages          = {115--134},
600     url            = {http://mitgcm.org/pdfs/journal_of_marine_systems_1998.pdf},
601     doi            = {10.1016/S0924-7963\%2898\%2900008-6},
602                    }                    }
603    
604  @Article{mcw:96,  @Article{mol:09,
605   author         = {J. McWilliams},   author         = {Andrea Molod},
606   year           = 1996,   year           = 2009,
607   title          = {Modeling the oceanic general circulation},   title          = {Running {GCM} physics and dynamics on different grids:
608   journal        = arfm,                     algorithm and tests},
609   volume         = {28},   journal        = tel,
610   pages          = {215--248},   volume         = {61A},
611     pages          = {381--393},
612                    }                    }
613    
614    %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
615    %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.
616    %% (Available from Unidata or in PostScript form by anonymous FTP from
617    %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also
618    %%   a hypertext version of the User's Guide available at
619    %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's
620    %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are
621    %%   also available.
622    
623    @incollection{naum-etal:06,
624            Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},
625            Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},
626            Editor = {{P. Wesseling, E. O~nate and J. Periaux}},
627            Pages = {~},
628            Publisher = {TU Delft},
629            Title = {Adjoint code by source transformation with OpenAD/F},
630            Year = {2006}}
631    
632    @Article{orl:76,
633     author         = {I. Orlanski},
634     year           = 1976,
635     title          = {A simple boundary condition for unbounded hyperbolic flows},
636     journal        = jcp,
637     volume         = {21},
638     pages          = {251--269},
639                    }
640    
641    @Article{pal-rom:97,
642     author         = {T. Paluszkiewicz and R.D. Romea},
643     year           = 1997,
644     title          = {A one-dimensional model for the parameterization
645                      of deep convection in the ocean},
646     journal        = dao,
647     volume         = {26},
648     pages          = {95--130},
649                      }
650    
651    @TechReport{rew:97,
652      author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
653      title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},
654                      An Interface for Data Access, Version 3},
655      institution =  {Unidata Program Center},
656      type =         {Report},
657      address =      {Boulder, Colorado},
658      year =         1997,
659      note =         {http://www.unidata.ucar.edu/packages/netcdf/},
660    }
661    
662    
663  @Article{res-eta:98,  @Article{res-eta:98,
664   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},
665   year           = 1998,   year           = 1998,
# Line 484  Line 669 
669   volume         = {19},   volume         = {19},
670   pages          = {1586--1605},   pages          = {1586--1605},
671                    }                    }
672    
673  @Article{ros-eta:93,  @Article{ros-eta:93,
674   author         = {N. Rostaing and S. Dalmas and A. Galligo},   author         = {N. Rostaing and S. Dalmas and A. Galligo},
675   year           = 1993,   year           = 1993,
# Line 493  Line 678 
678   volume         = {45A},   volume         = {45A},
679   pages          = {558--568},   pages          = {558--568},
680                    }                    }
681    
682  @incollection{she-and:89,  @incollection{she-and:89,
683   author         = {J. Sheinbaum and D.L.T. Anderson},   author         = {J. Sheinbaum and D.L.T. Anderson},
684   year           = 1989,   year           = 1989,
685   title          = {Assimilation of XBT data using a variational   title          = {Assimilation of XBT data using a variational
686                    technique},                    technique},
687   booktitle      = {Oceanic circulation models:   booktitle      = {Oceanic circulation models:
688                    Combining data and dynamics},                    Combining data and dynamics},
# Line 509  Line 694 
694   address        = {Berlin (Germany)},   address        = {Berlin (Germany)},
695                    }                    }
696    
697    @article{utke-etal:08,
698            Author = {J. Utke and U. Naumann and M. Fagan and N. Tallent and M. Strout and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch},
699            Date-Modified = {2007-11-19 10:15:08 -0500},
700            Journal = {{ACM} Transactions on Mathematical Software},
701            Pages = {~},
702            Title = {OpenAD/F: A modular open source tool for automatic differentiation of Fortran codes},
703            Volume = {34(4)},
704            Year = {2008}}
705    
706  @Article{DaSilva94,  @Article{DaSilva94,
707   author         = {A. da Silva and A. C. Young and S. Levitus},   author         = {A. da Silva and A. C. Young and S. Levitus},
708   year           = 1994,   year           = 1994,
# Line 518  Line 712 
712   publisher      = {U.S. Department of Commerce},   publisher      = {U.S. Department of Commerce},
713   address        = {Washington, D.C. (USA)},   address        = {Washington, D.C. (USA)},
714   note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},   note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
715     url            = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
716                    }                    }
717    
718  @techreport{sta-eta:97,  @techreport{stam-etal:97,
719   author         = {D. Stammer and C. Wunsch and R. Giering and   author         = {D. Stammer and C. Wunsch and R. Giering and
720                    Q. Zhang and J. Marotzke and J. Marshall and                    Q. Zhang and J. Marotzke and J. Marshall and
721                    C. Hill},                    C. Hill},
722   year           = 1997,   year           = 1997,
723   title          = {The global ocean circulation estimated from   title          = {The global ocean circulation estimated from
724                    TOPEX/POSEIDON altimetry and a general circulation                    TOPEX/POSEIDON altimetry and a general circulation
725                    model},                    model},
726   institution    = {Center for Global Change Science, Massachusetts   institution    = {Center for Global Change Science, Massachusetts
# Line 535  Line 730 
730   pages          = {40 pp.},   pages          = {40 pp.},
731   address        = {Cambridge (MA), USA},   address        = {Cambridge (MA), USA},
732                    }                    }
733    
734  @Article{sta-eta:01,  @ARTICLE{stam-etal:02,
735   author         = {D. Stammer and C. Wunsch and R. Giering and    author = {D. Stammer and C. Wunsch and R. Giering and C. Eckert and P. Heimbach and J. Marotzke and A. Adcroft and C.N. Hill and J. Marshall},
736                    C. Eckert and P. Heimbach and J. Marotzke and    title = {The global ocean circulation and transports during 1992 -- 1997, estimated from ocean observations and a general circulation model.},
737                    A. Adcroft and C. Hill and J. Marshall},    journal = jgr,
738   year           = 2001,    year = {2002a},
739   title          = {The global ocean circulation during 1992 -- 1997,    volume = {107(C9)},
740                    estimated from ocean observations and a general    pages = {3118},
741                    circulation model},    doi   = {10.1029/2001JC000888},
742   journal        = jgr,  }
743   note           = {in press},  
                   }  
744    
745  @Article{Stommel66,  @Article{Stommel66,
746   author         = {H. Stommel},   author         = {H. Stommel},
# Line 560  Line 754 
754  @Article{tal-cou:87,  @Article{tal-cou:87,
755   author         = {O. Talagrand and P. Courtier},   author         = {O. Talagrand and P. Courtier},
756   year           = 1987,   year           = 1987,
757   title          = {Variational assimilation of meteorological   title          = {Variational assimilation of meteorological
758                    observations with the adjoint vorticity equation.                    observations with the adjoint vorticity equation.
759                    I: Theory},                    I: Theory},
760   journal        = qjrms,   journal        = qjrms,
761   volume         = {113},   volume         = {113},
762   pages          = {1311--1328},   pages          = {1311--1328},
763                    }                    }
764    
765  @Article{tal:97,  @Article{tal:97,
766   author         = {O. Talagrand},   author         = {O. Talagrand},
767   year           = 1997,   year           = 1997,
# Line 576  Line 770 
770   volume         = {75},   volume         = {75},
771   pages          = {191--209},   pages          = {191--209},
772                    }                    }
773    
774  @book{tar:87,  @book{tar:87,
775   author         = {A. Tarantola},   author         = {A. Tarantola},
776   title          = {Inverse Problem Theory: Methods for data fitting   title          = {Inverse Problem Theory: Methods for data fitting
777                    and model parameter estimation},                    and model parameter estimation},
778   year           = 1987,   year           = 1987,
779   publisher      = {Elsevier},   publisher      = {Elsevier},
780   address        = {Amsterdam},   address        = {Amsterdam},
781   pages          = {629 pp.},   pages          = {629 pp.},
782                    }                    }
783                                                                      
784  @techreport{tha:87,  @techreport{tha:87,
785   author         = {W.C. Thacker},   author         = {W.C. Thacker},
786   year           = 1987,   year           = 1987,
# Line 598  Line 792 
792   pages          = {64 pp.},   pages          = {64 pp.},
793   address        = {Geesthacht (D)},   address        = {Geesthacht (D)},
794                    }                    }
795    
796  @Article{tha-lon:88,  @Article{tha-lon:88,
797   author         = {W.C. Thacker and R.B. Long},   author         = {W.C. Thacker and R.B. Long},
798   year           = 1988,   year           = 1988,
# Line 607  Line 801 
801   volume         = {93, C2},   volume         = {93, C2},
802   pages          = {1,227--1,240},   pages          = {1,227--1,240},
803                    }                    }
804    
805  @Article{tha:88,  @Article{tha:88,
806   author         = {W.C. Thacker},   author         = {W.C. Thacker},
807   year           = 1988,   year           = 1988,
# Line 617  Line 811 
811   volume         = {93},   volume         = {93},
812   pages          = {10,655--10,665},   pages          = {10,655--10,665},
813                    }                    }
814    
815  @Article{tha:89,  @Article{tha:89,
816   author         = {W.C. Thacker},   author         = {W.C. Thacker},
817   year           = 1989,   year           = 1989,
# Line 627  Line 821 
821   volume         = {94, C5},   volume         = {94, C5},
822   pages          = {6,177--6,196},   pages          = {6,177--6,196},
823                    }                    }
824    
825  @Article{tha-rag:94,  @Article{tha-rag:94,
826   author         = {W.C. Thacker and R. Raghunath},   author         = {W.C. Thacker and R. Raghunath},
827   year           = 1994,   year           = 1994,
# Line 637  Line 831 
831   volume         = {99, C5},   volume         = {99, C5},
832   pages          = {10,131--10,141},   pages          = {10,131--10,141},
833                    }                    }
834    
835  @Article{tzi-tha:89,  @Article{tzi-tha:89,
836   author         = {E. Tziperman and W.C. Thacker},   author         = {E. Tziperman and W.C. Thacker},
837   year           = {1989},   year           = {1989},
# Line 647  Line 841 
841   volume         = {19},   volume         = {19},
842   pages          = {1471--1485},   pages          = {1471--1485},
843                    }                    }
844    
845  @Article{tzi-eta:92a,  @Article{tzi-eta:92a,
846   author         = {E. Tziperman and W.C. Thacker and R.B. Long and   author         = {E. Tziperman and W.C. Thacker and R.B. Long and
847                    S. Hwang},                    S. Hwang},
# Line 658  Line 852 
852   volume         = {22},   volume         = {22},
853   pages          = {1434--1457},   pages          = {1434--1457},
854                    }                    }
855    
856  @Article{tzi-eta:92b,  @Article{tzi-eta:92b,
857   author         = {E. Tziperman and W.C. Thacker and R.B. Long and   author         = {E. Tziperman and W.C. Thacker and R.B. Long and
858                    S. Hwang and S.R. Rintoul},                    S. Hwang and S.R. Rintoul},
# Line 669  Line 863 
863   volume         = {22},   volume         = {22},
864   pages          = {1458--1485},   pages          = {1458--1485},
865                    }                    }
866    
867  @book{wun:96,  @book{wun:96,
868   author         = {C. Wunsch},   author         = {C. Wunsch},
869   title          = {The ocean circulation inverse problem},   title          = {The ocean circulation inverse problem},
870   year           = 1996,   year           = 1996,
871   publisher      = cup,   publisher      = cup,
872   address        = {Cambridge (UK)},   address        = {Cambridge (UK)},
873   pages          = {442 pp.},   pages          = {442 pp.},
874                    }                    }
875                                                                      
876  @Article{zha-mar:99,  @Article{zha-mar:99,
877   author         = {K.Q. Zhang and J. Marotzke},   author         = {K.Q. Zhang and J. Marotzke},
878   year           = 1999,   year           = 1999,
# Line 708  Line 902 
902    author =       {Marshall, J. and C. Hill and L. Perelman and A. Adcroft},    author =       {Marshall, J. and C. Hill and L. Perelman and A. Adcroft},
903    title =        {Hydrostatic, quasi-hydrostatic, and nonhydrostatic ocean    title =        {Hydrostatic, quasi-hydrostatic, and nonhydrostatic ocean
904                   modeling},                   modeling},
905    journal =      {JGR},    journal =      jgr,
906    year =         1997,    year =         1997,
907    volume =       102,    volume =       102,
908    number =       {C3},    number =       {C3},
909    pages =        {5733-5752}    pages =        {5733-5752},
910      url      =     {http://mitgcm.org/pdfs/96JC02775.pdf},
911  }  }
912    
913  @Article{marshall:97b,  @Article{marshall:97b,
914    author =       {Marshall, J., A. Adcroft, C. Hill, L. Perelman, and C. Heise},    author =       {Marshall, J. and A. Adcroft and C. Hill and L. Perelman and C. Heisey},
915    title =        {A finite-volume, incompressible Navier Stokes model for    title =        {A finite-volume, incompressible Navier Stokes model for
916                    studies of the ocean on parallel computers},                    studies of the ocean on parallel computers},
917    journal =      {JGR},    journal =      jgr,
918    year =         1997,    year =         1997,
919    volume =       102,    volume =       102,
920    number =       {C3},    number =       {C3},
921    pages =        {5753-5766}    pages =        {5753-5766},
922      url      =     {http://mitgcm.org/pdfs/96JC02776.pdf},
923  }  }
924    
925  @Article{adcroft:97,  @Article{adcroft:97,
926    author =       {Adcroft, A.J. and Hill, C.N. and J. Marshall},    author =       {Adcroft, A.J. and Hill, C.N. and J. Marshall},
927    title =        {Representation of topography by shaved cells in a height    title =        {Representation of topography by shaved cells in a height
928                    coordinate ocean model},                    coordinate ocean model},
929    journal =      {MWR},    journal =      mwr,
930    year =         1997,    year =         1997,
931    volume =       125,    volume =       125,
932    pages =        {2293-2315}    pages =        {2293-2315},
933      url   =        {http://mitgcm.org/pdfs/mwr_1997.pdf},
934      doi       =    {10.1175/1520-0493\%281997\%29125<2293:ROTBSC>2.0.CO;2},
935    }
936    
937    @Article{adcroft:04a,
938      author =       {Adcroft, A. and J.-M. Campin},
939      title =        {Re-scaled height coordinates for accurate representation
940                      of free-surface flows in ocean circulation models},
941      journal =      om,
942      year =         2004,
943      volume =       7,
944      pages =        {269-284},
945      doi   =        {10.1016/j.ocemod.2003.09.003},
946    }
947    
948    @Article{adcroft:04b,
949      author =       {Adcroft, A. and J.-M. Campin and C. Hill and J. Marshall},
950      title =        {Implementation of an Atmosphere-Ocean General Circulation Model
951                      on the Expanded Spherical Cube},
952      journal =      mwr,
953      year =         2004,
954      volume =       132,
955      pages =        {2845-2863},
956      url   =        {http://mitgcm.org/pdfs/mwr_2004.pdf},
957      doi     =      {10.1175/MWR2823.1},
958    }
959    
960    @inproceedings{adcroft:04c,
961      author =       {Adcroft, A. and C. Hill and J.-M. Campin and J. Marshall
962                      and P. Heimbach},
963      title =        {Overview of the Formulation and Numerics of the {MIT}GCM},
964      booktitle =   {Proceedings of the ECMWF seminar series on Numerical Methods,
965                     Recent developments in numerical methods for atmosphere and
966                     ocean modelling},
967      year =         2004,
968      pages =        {139-149},
969      url   =        {http://mitgcm.org/pdfs/ECMWF2004-Adcroft.pdf},
970     publisher =     ecmwf
971    }
972    
973    @Article{marshall:04,
974      author =       {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White},
975      title =        {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms},
976      journal =      mwr,
977      year =         2004,
978      volume =       132,
979      pages =        {2882-2894},
980      url   =        {http://mitgcm.org/pdfs/a_o_iso.pdf},
981      doi    =       {10.1175/MWR2835.1},
982  }  }
983    
984  @Article{visbeck:97,  @Article{visbeck:97,
985    author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall},    author =       {M. Visbeck and J. Marshall and T. Haine and M. Spall},
986    title =        {Specification of eddy transfer coefficients in    title =        {Specification of eddy transfer coefficients in coarse-resolution ocean circulation models},
987                    coarse-resolution ocean circulation models},    journal =      jpo,
   journal =      {JPO},  
988    year =         1997,    year =         1997,
989    volume =       27,    volume =       27,
990    number =       3,    number =       3,
# Line 760  Line 1004 
1004    pages =        {1-51}    pages =        {1-51}
1005  }  }
1006    
 @Article{marshall:98,  
   author =       {Marshall, J., Jones, H. and C. Hill},  
   title =        {Efficient ocean modeling using non-hydrostatic algorithms},  
   journal =      {JMR},  
   year =         1998,  
   volume =       18,  
   pages =        {115-134}  
 }  
   
1007  @Article{mjn:99,  @Article{mjn:99,
1008    author =       {Marshall, J., Jamous, D and J. Nilsson},    author =       {Marshall, J., Jamous, D and J. Nilsson},
1009    title =        {Reconciling `thermodynamic' and `dynamic' methods of    title =        {Reconciling `thermodynamic' and `dynamic' methods of
# Line 793  Line 1028 
1028    author =       {Adcroft, A., Hill C. and J. Marshall},    author =       {Adcroft, A., Hill C. and J. Marshall},
1029    title =        {A new treatment of the Coriolis terms in C-grid models    title =        {A new treatment of the Coriolis terms in C-grid models
1030                    at both high and low resolutions},                    at both high and low resolutions},
1031    journal =      {MWR},    journal =      mwr,
1032    year =         1999,    year =         1999,
1033    volume =       127,    volume =       127,
1034    pages =        {1928-1936}    pages =        {1928-1936},
1035      url   =        {http://mitgcm.org/pdfs/mwr_1999.pdf},
1036      doi   =        {10.1175/1520-0493\%281999\%29127<1928:ANTOTC>2.0.CO;2},
1037  }  }
1038    
1039  @InProceedings{hill:99,  @InProceedings{hill:99,
# Line 811  Line 1048 
1048  @Article{wardle:00,  @Article{wardle:00,
1049    author =       {Wardle R. and Marshall J.},    author =       {Wardle R. and Marshall J.},
1050    title =        {Representation of eddies in primitive equation models by a PV flux},    title =        {Representation of eddies in primitive equation models by a PV flux},
1051    journal =      {JPO},    journal =      jpo,
1052    year =         2000,    year =         2000,
1053    volume =       30,    volume =       30,
1054    number =       10,    number =       10,
# Line 822  Line 1059 
1059    author =       {Adcroft, A. and J.-M. Campin},    author =       {Adcroft, A. and J.-M. Campin},
1060    title =        {Comparison of finite volume schemes and direct-space-time    title =        {Comparison of finite volume schemes and direct-space-time
1061                    methods for ocean circulation models},                    methods for ocean circulation models},
1062    journal =      {OM},    journal =      om,
1063    year =         2002,    year =         2002,
1064    note =         {in preparation}    note =         {in preparation}
1065  }  }
1066    
1067  @Article{adcroft:02,  @Article{adcroft:02,
1068    author =       {Adcroft et al.},    author =       {Adcroft, A., et~al.},
1069    title =        {Energy conversion in discrete numerical models},    title =        {Energy conversion in discrete numerical models},
1070    journal =      {OM},    journal =      om,
1071    year =         2002,    year =         2002,
1072    note =         {in preparation}    note =         {in preparation}
1073  }  }
# Line 846  Line 1083 
1083    volume =       17    volume =       17
1084  }  }
1085    
1086    @Article{miller_white:84,
1087      author =       {Miller, M. J. and White, A. A.},
1088      title =        {On the non-hydrostatic equations in pressure
1089                      and sigma coordiantes},
1090      journal =      qjrms,
1091      year =         1984,
1092      volume =       110,
1093      pages =        {515-533}
1094    }
1095    
1096    @Article{white:89,
1097      author =       {White, A. A.},
1098      title =        {An extended version of a nonhydrostatic, pressure coordiante model},
1099      journal =      qjrms,
1100      year =         1989,
1101      volume =       115,
1102      pages =        {1243-1251}
1103    }
1104    
1105  @Article{adcroft:98,  @Article{adcroft:98,
1106    author =       {Adcroft, A. and Marshall, D.},    author =       {Adcroft, A. and Marshall, D.},
1107    title =        {How slippery are piecewise-constant coastlines in numerical    title =        {How slippery are piecewise-constant coastlines in numerical
# Line 867  Line 1123 
1123    
1124  @Article{griffies:00,  @Article{griffies:00,
1125    author =       {Griffies, S.,M. and Hallberg, R.,W.},    author =       {Griffies, S.,M. and Hallberg, R.,W.},
1126    title =        {Biharmonic friction with a Smagorinsky-like viscosity for    title =        {Biharmonic friction with a {Smagorinsky}-like viscosity for
1127                    use in large-scale eddy-permitting ocean models},                    use in large-scale eddy-permitting ocean models},
1128    journal =      {MWR},    journal =      mwr,
1129    year =         2000,    year =         2000,
1130    volume =       128,    volume =       128,
1131    number =       8,    number =       8,
# Line 880  Line 1136 
1136    author =       {Wajsowicz, R.},    author =       {Wajsowicz, R.},
1137    title =        {A CONSISTENT FORMULATION OF THE ANISOTROPIC STRESS TENSOR    title =        {A CONSISTENT FORMULATION OF THE ANISOTROPIC STRESS TENSOR
1138                    FOR USE IN MODELS OF THE LARGE-SCALE OCEAN CIRCULATION},                    FOR USE IN MODELS OF THE LARGE-SCALE OCEAN CIRCULATION},
1139    journal =      {JCP},    journal =      jcp,
1140    year =         1993,    year =         1993,
1141    volume =       105,    volume =       105,
1142    number =       2,    number =       2,
# Line 888  Line 1144 
1144  }  }
1145    
1146  @Article{campin:02,  @Article{campin:02,
1147    author =       {Campin et al.},    author =       {Campin, J.-M. and A. Adcroft and C. Hill and J. Marshall},
1148    title =        {Conservation of properties in a free-surface model},    title =        {Conservation of properties in a free-surface model},
1149    journal =      {OM},    journal =      om,
1150    year =         2002,    year =         2004,
1151    note =         {in preparation}    volume =       6,
1152      pages =        {221-244}
1153    }
1154    
1155    @Article{Cox87,
1156      author =       {M. D. Cox},
1157      title =        {An isopycnal diffusion in a z-coordinate ocean model},
1158      journal =      {Ocean modelling},
1159      year =         1987,
1160      volume =       74,
1161      pages =        {1-5 (Unpublished manuscript)}
1162    }
1163    
1164    @Article{gretal:98,
1165      author =       {S. M. Griffies and A. Gnanadesikan and R. C. Pacanowski and V. Larichev and J.  K. Dukowicz and R. D. Smith},
1166      title =        {Isoneutral diffusion in a z-coordinate ocean model},
1167      journal =      jpo,
1168      year =         1998,
1169      volume =       28,
1170      pages =        {805-830}
1171    }
1172    
1173    @ARTICLE{gr:98,
1174      author =       {S. M. Griffies},
1175      title =        {The {Gent-McWilliams} Skew Flux},
1176      journal =      jpo,
1177      year =         1998,
1178      volume =       28,
1179      pages =        {831-841}
1180    }
1181    
1182    
1183    @Article{gkw:91,
1184      author =       {R. Gerdes and C. Koberle and J. Willebrand},
1185      title =        {The influence of numerical advection schemes on the results of ocean general circulation models},
1186      journal =      climd,
1187      year =         1991,
1188      volume =       5,
1189      number =       4,
1190      pages =        {211-226},
1191      doi   =        {10.1007/BF00210006}
1192  }  }
1193    
1194  @Article{dm:95,  @Article{dm:95,
1195    author =       {Danabasoglu, G. and McWilliams J.C.},    author =       {G. Danabasoglu and J. C. McWilliams},
1196    title =        {Sensitivity of the global ocean circulation to parameterizations of mesoscale tracer transports},    title =        {Sensitivity of the global ocean circulation to parameterizations of mesoscale tracer transports},
1197    journal =      {JC},    journal =      jclim,
1198    year =         1995,    year =         1995,
1199    volume =       8,    volume =       8,
1200    number =       12,    number =       12,
1201    pages =        {2967-2987}    pages =        {2967-2987}
1202  }  }
1203    
 @Article{ldd:97,  
   author =       {Large, W.G. and Danabasoglu, G. and Doney, S.C. and McWilliams, J.C.},  
   title =        {Sensitivity to surface forcing and boundary layer mixing in a global ocean model: Annual-mean climatology},  
   journal =      {JPO},  
   year =         1997,  
   volume =       27,  
   number =       11,  
   pages =        {2418-2447}  
 }  
   
1204  @Article{gkw:99,  @Article{gkw:99,
1205    author =       {Gerdes R. and Koberle C. and Beckmann A. and Herrmann P. and Willebrand J.},    author =       {R. Gerdes and C. Koberle and A. Beckmann and P. Herrmann and J. Willebrand},
1206    title =        {Mechanisms for spreading of Mediterranean water in    title =        {Mechanisms for spreading of Mediterranean water in coarse-resolution numerical models},
1207                    coarse-resolution numerical models},    journal =      jpo,
   journal =      {JPO},  
1208    year =         1999,    year =         1999,
1209    volume =       29,    volume =       29,
1210    number =       8,    number =       8,
1211    pages =        {1682-1700}    pages =        {1682-1700}
1212  }  }
1213    
1214  @Article{roe:85,  @incollection{roe:85,
1215    author =       {Roe, P.L.},   author         = {P.L. Roe},
1216    title =        {Some contributions to the modeling of discontinuous flows},   year           = 1985,
1217    journal =      {Lect. Notes Appl. Math.},   title          = {Some contributions to the modelling of discontinuous flows},
1218    year =         1985,   booktitle      = {Large-Scale Computations in Fluid Mechanics},
1219    volume =       22,   series         = {Lectures in Applied Mathematics},
1220    pages =        {163-193}   volume         = 22,
1221     pages          = {163-193},
1222     editor         = {B.E. Engquist and S. Osher and R.C.J. Somerville},
1223     publisher      = {American Mathematical Society},
1224     address        = {Providence, RI},
1225    }
1226    
1227    @Article{trenberth90,
1228      author =       {K. M. Trenberth and J. Olson and W. G. Large},
1229      title =        {The Mean Annual Cycle in {G}lobal {O}cean Wind
1230                      Stress},
1231      journal =      jpo,
1232      year =         1990,
1233      volume =       20,
1234      pages =        {1742--1760}
1235    }
1236    
1237    @Article{molteni:03,
1238      author =       {F. Molteni},
1239      title =        {Atmospheric simulations using a {GCM} with simplified physical
1240                      parametrization, {I}: Model climatology and variability in
1241                      multidecadal experiments},
1242      journal =      climd,
1243      year =         2003,
1244      volume =       20,
1245      pages =        {175--191}
1246    }
1247    
1248    @Article{jiang99,
1249      author =       {S. Jiang and P. H. Stone and P. Malanotte-Rizzoli},
1250      title =        {An Assessment of the {G}eophysical {F}luid
1251                      {D}ynamics {L}aboratory Ocean Model with Coarse
1252                      Resolution: Annual-Mean Climatology},
1253      journal =      jgr,
1254      year =         1999,
1255      volume =       104,
1256      number =       {C11},
1257      pages =        {25,623--25,645}
1258    }
1259    
1260    @Article{szoeke02,
1261      author =       {de Szoeke, Roland A. and Roger M. Samelson},
1262      title =        {The Duality between the {B}oussinesq and
1263                      {N}on-{B}oussinesq Hydrostatic Equations of Motion},
1264      journal =      jpo,
1265      year =         2002,
1266      volume =       32,
1267      number =       8,
1268      pages =        {2194--2203}
1269    }
1270    
1271    @Article{jackett95,
1272      author =       {David R. Jackett and Trevor J. McDougall},
1273      title =        {Minimal Adjustment of Hydrographic Profiles to
1274                      Achieve Static Stability},
1275      journal =      jaot,
1276      year =         1995,
1277      volume =       12,
1278      number =       4,
1279      pages =        {381--389}
1280    }
1281    
1282    @Article{mcdougall03,
1283      author =       {Trevor J. McDougall and David R. Jackett and Daniel
1284                      G. Wright and Rainer Feistel},
1285      title =        {Accurate and Computationally Efficient Algorithms
1286                      for Potential Temperature and Density of Seawater},
1287      journal =      jaot,
1288      year =         {2003},
1289      OPTkey =       {},
1290      OPTvolume =    {},
1291      OPTnumber =    {},
1292      OPTpages =     {},
1293      OPTmonth =     {},
1294      OPTnote =      {{\textup{In press}}},
1295      OPTannote =    {}
1296    }
1297    
1298    @TechReport{fofonoff83,
1299      author =       "Fofonoff, P. and Millard, Jr., R.C.",
1300      title =        "Algorithms for Computation of Fundamental Properties
1301                      of Seawater",
1302      institution =  "Unesco",
1303      year =         1983,
1304      type =         "Unesco Technical Papers in Marine Science",
1305      number =       44,
1306      pages =        {53 pp.}
1307    }
1308    
1309    @ARTICLE{zha98a,
1310      AUTHOR      = "J. Zhang and Hibler, III, W. D. and M. Steele
1311                     and D. A. Rothrock",
1312      TITLE       = "Arctic ice-ocean modeling with and without climate restoring",
1313      JOURNAL     = jpo,
1314      YEAR        = 1998,
1315      VOLUME      = 28,
1316      PAGES       = "191-217"
1317    }
1318    
1319    @ARTICLE{sem76,
1320      AUTHOR      = "Semtner, Jr., Albert J.",
1321      TITLE       = "A model for the thermodynamic growth of sea ice in
1322                     numerical investigations of climate",
1323      JOURNAL     = jpo,
1324      YEAR        = 1976,
1325      VOLUME      = 6,
1326      PAGES       = "379-389"
1327    }
1328    
1329    @ARTICLE{win00,
1330      AUTHOR      = "M. Winton",
1331      TITLE       = "A reformulated three-layer sea ice model",
1332      JOURNAL     = jaot,
1333      YEAR        = 2000,
1334      VOLUME      = 17,
1335      PAGES       = "525-531"
1336    }
1337    
1338    @ARTICLE{hib79,
1339      author =       {Hibler, III, W. D.},
1340      TITLE       = "A Dynamic Thermodynamic Sea Ice Model",
1341      JOURNAL     = jpo,
1342      YEAR        = 1979,
1343      VOLUME      = 9,
1344      PAGES       = "815-846"
1345    }
1346    
1347    @ARTICLE{fla92,
1348      AUTHOR      = "G. M. Flato and Hibler, III, W. D.",
1349      TITLE       = "Modeling pack ice as a cavitating fluid",
1350      JOURNAL     = jpo,
1351      YEAR        = 1992,
1352      VOLUME      = 22,
1353      PAGES       = "626-651"
1354    }
1355    
1356    @ARTICLE{hun97,
1357      AUTHOR      = "E. C. Hunke and J. K. Dukowicz",
1358      TITLE       = "An elastic-viscous-plastic model for sea ice dynamics",
1359      JOURNAL     = jpo,
1360      YEAR        = 1997,
1361      VOLUME      = 27,
1362      PAGES       = "1849--1867"
1363    }
1364    
1365    @Article{hun01,
1366      author =       {Elizabeth C. Hunke},
1367      title =        {Viscous-Plastic Sea Ice Dynamics with the {EVP}
1368                      Model: Linearization Issues},
1369      journal =      jcp,
1370      year =         2001,
1371      volume =       170,
1372      pages =        {18--38},
1373      doi =          {10.1006/jcph.2001.6710}
1374    }
1375    
1376    @ARTICLE{zha00,
1377      AUTHOR      = "Jinlun Zhang and Drew Rothrock",
1378      TITLE       = "Modeling Arctic Sea Ice with an Efficient Plastic Solution",
1379      JOURNAL     = jgr,
1380      YEAR        = 2000,
1381      VOLUME      = 105,
1382      PAGES       = "3325--3338"
1383    }
1384    
1385    @Article{Shapiro_70,
1386      author =       {Shapiro, R.},
1387      title =        {Smoothing, filtering, and boundary effects},
1388      journal =      {Reviews of Geophysics and Space Physics},
1389      year =         {1970},
1390      volume =       {8},
1391      number =       {2},
1392      pages =        {359--387},
1393    }
1394    
1395    @TechReport{Dutkiewicz_etal_05,
1396      author =       {S. Dutkiewicz and A. Sokolov and J. Scott and P. Stone},
1397      title =        {A Three-Dimensional Ocean-Seaice-Carbon Cycle Model and
1398                      its Coupling to a Two-Dimensional Atmospheric Model: Uses
1399                      in Climate Change Studies, Report 122},
1400      institution =  {MIT Joint Program of the Science and Policy of Global Change},
1401      year =         {2005},
1402      OPTnumber =    {122},
1403      address =      {Cambridge, MA},
1404      note =         {http://web.mit.edu/globalchange/www/MITJPSPGC\_Rpt122.pdf},
1405    }
1406    
1407    @Article{Follows_etal_05,
1408      author =       {M. Follows and T. Ito and S. Dutkiewicz},
1409      title =        {A Compact and Accurate Carbonate Chemistry Solver for Ocean
1410                      Biogeochemistry Models},
1411      journal =      {Ocean Modeling},
1412      year =         {{in press}},
1413      OPTkey =       {},
1414      OPTvolume =    {},
1415      OPTnumber =    {},
1416      OPTpages =     {},
1417    }
1418    
1419    @Article{McKinley_etal_04,
1420      author =       {G. McKinley and M. J. Follows and J. C. Marshall},
1421      title =        {Mechanisms of air-sea CO$_2$ flux variability in the
1422                      Equatorial Pacific and the North Atlantic},
1423      journal =      {Global Biogeochemical Cycles},
1424      year =         {2004},
1425      OPTkey =       {},
1426      volume =       {18},
1427      number =       {doi:10.1029/2003GB002179},
1428      OPTpages =     {},
1429    }
1430    
1431    @TechReport{Trenberth_etal_89,
1432      author =       {K. Trenberth and J. Olson and W. Large},
1433      title =        {A global wind stress climatology based on ECMWF analyses},
1434      institution =  {NCAR},
1435      year =         {1989},
1436      OPTkey =       {},
1437      OPTtype =      {},
1438      number =       {NCAR/TN-338+STR},
1439      address =      {Boulder, CO},
1440      OPTmonth =     {},
1441    }
1442    
1443    @Article{Wanninkhof_92,
1444      author =       {R. Wanninkhof},
1445      title =        {Relationship between wind speed and gas exchange over the ocean},
1446      journal =      jgr,
1447      year =         {1992},
1448      OPTkey =       {},
1449      volume =       {97},
1450      OPTnumber =    {},
1451      pages =        {7373--7382},
1452      OPTmonth =     {},
1453    }
1454    
1455    @incollection{black:77,
1456     author       = {A. K. Blackadar},
1457     year         = {1977},
1458     title        = {High Resolution Models of the Planetary Boundary Layer.},
1459     booktitle    = {Advances in Environmental Science and Engineering, Vol 1 } ,
1460     editor       = {Pfafflin and Zeigler},
1461     publisher    = {Gordon and Breach, Scientific Publishers}
1462    }
1463    
1464    @Article{chou:92,
1465     author       = {M-D. Chou},
1466     year         = {1992},
1467     title        = {A solar radiation model for use in climate studies.},
1468     journal      = jas,
1469     volume       = {49},
1470     pages        = {762-772}
1471    }
1472    
1473    @Article{chou:90,
1474     author       = {M-D. Chou},
1475     year         = {1990},
1476     title        = {Parameterizations for the absorption of solar radiation
1477                       by O$_2$ and CO$_2$ with applications to climate studies.},
1478     journal      = jclim,
1479     volume       = {3},
1480     pages        = {209-217}
1481    }
1482    
1483    @techreport{chsz:94,
1484     author       = {M.-D. Chou and M.J.Suarez},
1485     year         = {1994},
1486     title        = {An efficient thermal infrared radiation parameterization
1487    for use in general circulation models},
1488     institution  = {National Aeronautics and Space Administration},
1489     type         = {NASA Technical Memorandum},
1490     number       = {104606-Vol 3},
1491     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1492     note         = {http://www.gmao.nasa.gov/}
1493    }
1494    
1495    @Article{clarke:70,
1496     author       = {R. H. Clarke},
1497     year         = {1970},
1498     title        = {Observational studies in the atmospheric boundary layer.},
1499     journal      = qjrms,
1500     volume       = {96},
1501     pages        = {91-114}
1502    }
1503    
1504    @Article{deftow:94,
1505     author       = { R. S. Defries and J. R. G. Townshend},
1506     year         = {1994},
1507     title        = {NDVI-derived Land Cover Classification at Global Scales. },
1508     journal      = {Int'l J. Rem. Sens.} ,
1509     volume       = {15},
1510     pages        = {3567-3586}
1511    }
1512    
1513    @Article{dorsell:89,
1514     author       = { J. L. Dorman and P. J. Sellers},
1515     year         = {1989},
1516     title        = {A global climatology of albedo, roughness length and stomatal
1517    resistance for atmospheric general circulation models as represented by the Simple Biosphere model (SiB).},
1518     journal      = jam,
1519     volume       = {28},
1520     pages        = {833-855}
1521    }
1522    
1523    @Article{helflab:88,
1524     author       = { H. M. Helfand and J. C. Labraga},
1525     year         = {1988},
1526     title        = { Design of a non-singular level 2.5 second-order closure
1527    model for the prediction of atmospheric turbulence. },
1528     journal      = jas,
1529     volume       = {45},
1530     pages        = {113-132}
1531    }
1532    
1533    @inproceedings{helfetal:91,
1534     author       = {H. M. Helfand and M. Fox-Rabinovitz and L. Takacs and A. Molod},
1535     year         = {1991},
1536     title        = {Simulation of the planetary boundary layer and turbulence in the GLA GCM},
1537     booktitle    = {Proceedings of the AMS Ninth Conference on Numerical Weather Predicition},
1538     year         = 1991,
1539     pages        = {406-425},
1540     publisher    = {American Meteorological Society}
1541    }
1542    
1543    @Article{helfschu:95,
1544     author       = {H. M. Helfand and S. D. Schubert},
1545     year         = {1995},
1546     title        = { Climatology of the
1547    Simulated Great Plains Low-Level Jet and Its contribution to the
1548    Continental Moisture Budget of the United States. },
1549     journal      = jclim,
1550     volume       = {8},
1551     pages        = {784-806}
1552    }
1553    
1554    @Article{kondo:75,
1555     author       = {J. Kondo},
1556     year         = {1975},
1557     title        = {Air-sea bulk transfer coefficients in diabatic conditions.},
1558     journal      = blm,
1559     volume       = {9},
1560     pages        = {91-112}
1561    }
1562    
1563    @techreport{ks:91,
1564     author       = { Randal D. Koster and Max J. Suarez},
1565     year         = {1991},
1566     title        = { A Simplified Treatment of SiB's Land Surface Albedo Parameterization.},
1567     institution  = {National Aeronautics and Space Administration},
1568     type         = {NASA Technical Memorandum},
1569     number       = {104538},
1570     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1571     note         = {http://www.gmao.nasa.gov/},
1572    }
1573    
1574    @Article{ks:92,
1575     author       = { Randal D. Koster and Max J. Suarez},
1576     year         = {1992},
1577     title        = { Modeling the Land Surface Boundary
1578    in Climate Models as a Composite of Independent Vegetation Stands.},
1579     journal      = jgr,
1580     volume       = {97},
1581     pages        = {2697-2715}
1582    }
1583    
1584    @Article{lhans:74,
1585     author       = {A. A. Lacis and J. E. Hansen},
1586     year         = {1974},
1587     title        = { A parameterization for the absorption of solar radiation
1588    in the Earth's atmosphere.  },
1589     journal      = jas,
1590     volume       = {31},
1591     pages        = {118-133}
1592    }
1593    
1594    @Article{larpond:81,
1595     author       = {W. G. Large and S. Pond},
1596     year         = {1981},
1597     title        = {Open ocean momentum flux measurements in moderate to strong winds.},
1598     journal      = jpo,
1599     volume       = {11},
1600     pages        = {324-336}
1601    }
1602    
1603    @Article{moorsz:92,
1604     author       = {S. Moorthi and M. J. Suarez},
1605     year         = {1992},
1606     title        = {  Relaxed Arakawa Schubert: A parameterization of moist
1607    convection for general circulation models.},
1608     journal      = mwr,
1609     volume       = {120},
1610     pages        = {978-1002}
1611    }
1612    
1613    @incollection{pano:73,
1614     author       = {H. A. Panofsky},
1615     year         = {1973},
1616     title        = {Tower Micrometeorology. },
1617     booktitle    = {Workshop on Micrometeorology},
1618     editor       = {D. A. Haugen},
1619     publisher    = {American Meteorological Society}
1620    }
1621    
1622    @Article{reynetal:94,
1623     author       = {R. W. Reynolds and T. M. Smith},
1624     year         = {1994},
1625     title        = {Improved global sea surface temperature analyses using optimum interpolation.},
1626     journal      = jclim,
1627     volume       = {7},
1628     pages        = {929-948}
1629    }
1630    
1631    @Article{rosen:87,
1632     author       = {J. E. Rosenfield and M. R. Schoeberl and M. A. Geller},
1633     year         = {1987},
1634     title        = {  A computation of the stratospheric
1635    diabatic circulation using an accurate radiative transfer model},
1636     journal      = jas,
1637     volume       = {44},
1638     pages        = {859-876}
1639    }
1640    
1641    @Article{sudm:88,
1642     author       = {Y. C. Sud and A. Molod},
1643     year         = {1988},
1644     title        = {  The roles of dry convection, cloud-radiation feedback processes
1645    and the influence of recent improvements in the parameterization of convection in the GLA GCM.  },
1646     journal      = mwr,
1647     volume       = {116},
1648     pages        = {2366-2387}
1649    }
1650    
1651    @techreport{taksz:96,
1652     author       = {L. L. Takacs and M.J. Suarez},
1653     year         = {1996},
1654     title        = {  Dynamical aspects of climate simulations Using the GEOS
1655    General Circulation Model},
1656     institution  = {National Aeronautics and Space Administration},
1657     type         = {NASA Technical Memorandum},
1658     number       = {104606 Volume 10},
1659     address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1660     note         = {http://www.gmao.nasa.gov/},
1661    }
1662    
1663    @Article{yagkad:74,
1664     author       = {A. M. Yaglom and B. A. Kader},
1665     year         = {1974},
1666     title        = {Heat and mass transfer between a rough wall and
1667    turbulent fluid flow at high Reynolds and Peclet numbers.  },
1668     journal      = jfm,
1669     volume       = {62},
1670     pages        = {601-623}
1671    }
1672    
1673    @Article{yam:77,
1674     author       = {T. Yamada},
1675     year         = {1977},
1676     title        = {  A numerical experiment on pollutant dispersion in a horizontally-homogenious
1677    atmospheric boundary layer.},
1678     journal      = {Atmos. Environ.},
1679     volume       = {11},
1680     pages        = {1015-1024}
1681    }
1682    
1683    @Article{zhouetal:95,
1684     author       = {J. Zhou and Y.C. Sud and K.-M. Lau},
1685     year         = {1995},
1686     title        = {Impact of Orographically Induced Gravity Wave Drag in the GLA GCM},
1687     journal      = qjrms,
1688     volume       = {122},
1689     pages        = {903-927}
1690    }
1691    
1692    @Article{breth:99,
1693     author         = {C. S. Bretherton and M.K. MacVean and P. Bechtold and A. Chlond
1694                       and W.R. Cotton and J. Cuxart and H. Cuijpers and M. Khairoutdinov
1695                       and B. Kosovic and D. Lewellen and C-H. Moeng and P. Siebesma and
1696                       B. Stevens and D.E. Stevens and I. Sykes and M.C. Wyant},
1697     year           = 1999,
1698     title          = {An intercomparison of radiatively driven entrainment and turbulence
1699                      in a smoke cloud, as simulated by different numerical models.},
1700     journal        = qjrms,
1701     volume         = {125},
1702     pages          = {391-423}
1703                      }
1704    
1705    @Article{bm:99,
1706     author         = {A. C. Bushell and G.M. Martin},
1707     year           = 1999,
1708     title          = {The Impact of Vertical Resolution Upon GCM Simulations of Marine Stratocumulus.},
1709     journal        = {Climate Dyn.},
1710     volume         = {15},
1711     pages          = {293-318}
1712                      }
1713    
1714    @Article{Inn:01,
1715     author         = {P. M. Inness and S.J. Slingo and R.B. Woolnough and B. Neale and V.D. Pope},
1716     year           = 2001,
1717     title          = {Organization of Tropical Convection in a GCM with Verying Vertical Resolution;
1718                      Implications for the Simulation of the Madden-Julian Oscillation.},
1719     journal        = {Climate Dyn.},
1720     volume         = {17},
1721     pages          = {777-794}
1722                      }
1723    
1724    @Article{kal:89,
1725     author         = {E. Kalnay and M. Kanamitsu and J. Pfaendtner and J. Sela and M. Suarez and
1726                       J. Stackpole and J. Tucillo and L. Umscheid and and D. Williamson},
1727     year           = 1989,
1728     title          = {Rules for Interchange of Physical Parameterizations.},
1729     journal        = bams,
1730     volume         = {70},
1731     pages          = {620-622}
1732                      }
1733    
1734    @Article{wo:98,
1735     author         = {D. Williamson and J.G. Olsen},
1736     year           = 1998,
1737     title          = {A Comparison of Semi-Langrangian and Eulerian Polar Climate Simulations.},
1738     journal        = mwr,
1739     volume         = {126},
1740     pages          = {991-1000}
1741                      }
1742    
1743    @TechReport{MPI-std-20,
1744      author =       {{Message Passing Interface Forum}},
1745      title =        {{MPI}: A Message-Passing Interface standard (version 2.0)},
1746      institution =  {mpi-forum.org},
1747      year =         {1998},
1748    }
1749    
1750    @Article{cam08,
1751      author =       {Jean-Michel Campin and John Marshall and David
1752                      Ferreira},
1753      title =        {Sea-Ice Ocean Coupling Using a Rescaled Vertical
1754                      Coordinate z$^\ast$},
1755      journal =      om,
1756      volume =       24,
1757      number =       {1--2},
1758      pages =        {1--14},
1759      doi =          {10.1016/j.ocemod.2008.05.005},
1760      year =         2008
1761    }
1762    
1763    @Article{geiger98,
1764      author =       {Cathleen A. Geiger and Hibler, III, William D. and
1765                      Stephen F. Ackley},
1766      title =        {Large-Scale Sea Ice Drift and Deformation:
1767                      {C}omparison between Models and Observations in the
1768                      Western {W}eddell {S}ea during 1992},
1769      journal =      jgr,
1770      year =         1998,
1771      volume =       103,
1772      number =       {C10},
1773      pages =        {21893--21913}
1774    }
1775    
1776    @InCollection{hibler84,
1777      author =       {Hibler, III, William D.},
1778      title =        {The role of sea ice dynamics in modeling CO{$_2$}
1779                      increases},
1780      booktitle =    {Climate processes and climate sensitivity},
1781      pages =        {238--253},
1782      publisher =    {AGU},
1783      year =         1984,
1784      editor =       {J. E. Hansen and T. Takahashi},
1785      volume =       29,
1786      series =       {Geophysical Monograph},
1787      address =      {Washington, D.C.}
1788    }
1789    
1790    @Article{hibler87,
1791      author =       {Hibler, III, William D. and Kirk Bryan},
1792      title =        {A Diagnostic Ice-Ocean Model},
1793      journal =      jpo,
1794      year =         1987,
1795      volume =       17,
1796      number =       7,
1797      pages =        {987--1015}
1798    }
1799    
1800    @InCollection{hibler95,
1801      author =       {Hibler, III, William D. and Chi F. Ip},
1802      title =        {The effect of sea ice rheology on {A}rcitc buoy
1803                      drift},
1804      booktitle =    {Ice Mechanics},
1805      pages =        {255--264},
1806      publisher =    {Am. Soc. of Mech. Eng.},
1807      year =         1995,
1808      editor =       {John P. Dempsey and Y. D. S. Rajapakse},
1809      volume =       204,
1810      series =       {AMD},
1811      address =      {New York}
1812    }
1813    
1814    @Article{hibler97,
1815      author =       {Hibler, III, William D. and Erland M. Schulson},
1816      title =        {On Modeling Sea-Ice Fracture and Flow in Numerical
1817                      Investigations of Climate},
1818      journal =      angl,
1819      year =         1997,
1820      volume =       25,
1821      pages =        {26--32}
1822    }
1823    
1824    @Article{hundsdorfer94,
1825      author =       {Willem Hundsdorfer and R. A. Trompert},
1826      title =        {Method of Lines and Direct Discretization: a
1827                      Comparison for Linear Advection},
1828      journal =      {Applied Numerical Mathematics},
1829      year =         1994,
1830      volume =       13,
1831      number =       6,
1832      pages =        {469--490},
1833      doi =          {10.1016/0168-9274(94)90009-4}
1834    }
1835    
1836    @Article{leppaeranta83,
1837      author =       {Matti Lepp{\"a}ranta},
1838      title =        {A Growth Model for Black Ice, Snow Ican and Snow
1839                      Thickness in Subarctic Basins},
1840      journal =      {Nordic Hydrology},
1841      year =         1983,
1842      volume =       14,
1843      pages =        {59--70}
1844    }
1845    
1846    @Article{manabe79,
1847      author =       {S. Manabe and Kirk Bryan and M. J. Spelman},
1848      title =        {A Global Ocean-Atmosphere Climate Model with Seasonal
1849                      Variation for Future Studies of Climate Sensitivity},
1850      journal =      dao,
1851      year =         1979,
1852      volume =       3,
1853      number =       {393--426}
1854    }
1855    
1856    @ARTICLE{menemenlis05,
1857      author =       {D. Menemenlis and C. Hill and A. Adcroft and
1858                      J.-M. Campin and B. Cheng and B. Ciotti and
1859                      I. Fukumori and A. Koehl and P. Heimbach and
1860                      C. Henze and T. Lee and D. Stammer and J. Taft and
1861                      J. Zhang},
1862      title =        {{NASA} Supercomputer Improves Prospects for Ocean
1863                      Climate Research},
1864      journal =      eos,
1865      year =         2005,
1866      volume =       86,
1867      number =       9,
1868      pages =        {89, 95--96}
1869    }
1870    
1871    @Article{parkinson79,
1872      author =       {{Parkinson}, Claire~L. and {Washington}, Warren~M.},
1873      title =        "{A Large-Scale Numerical Model of Sea Ice}",
1874      journal =      jgr,
1875      year =         1979,
1876      month =        jan,
1877      volume =       84,
1878      number =       {C1},
1879      pages =        {311--337},
1880      adsurl =       {http://adsabs.harvard.edu/cgi-bin/nph-bib_query?bibcode=1979JGR....84..311P&db_key=PHY},
1881      adsnote =      {Provided by the Smithsonian/NASA Astrophysics Data
1882                      System}
1883    }
1884    
1885    @Article{semtner84,
1886      author =       {Semtner, Jr., Albert J.},
1887      title =        {On Modelling the Seasonal Thermodynamic Cycle of Sea
1888                      Ice in Studies of Climatic Change},
1889      journal =      cch,
1890      year =         1984,
1891      volume =       6,
1892      number =       1,
1893      pages =        {27--37}
1894    }
1895    
1896    @Article{zhang97,
1897      author =       {Jinlun Zhang and Hibler, III, William D.},
1898      title =        {On an Efficient Numerical Method for Modeling Sea Ice Dynamics},
1899      journal =      jgr,
1900      year =         1997,
1901      volume =       102,
1902      number =       {C4},
1903      pages =        {8691--8702}
1904    }
1905    
1906    @Article{zhang03,
1907      author =       {Jinlun Zhang and Drew A. Rothrock},
1908      title =        {Modeling Global Sea Ice with a Thickness and
1909                      Enthalpy Distribution Model in Generalized
1910                      Curvilinear Coordinates},
1911      journal =      mwr,
1912      year =         2003,
1913      volume =       131,
1914      number =       5,
1915      pages =        {845--861}
1916    }
1917    
1918    @Article{beckmann99,
1919      author =       {Aike Beckmann and Hartmut H. Hellmer and Ralph
1920                      Timmermann},
1921      title =        {A Numerical Model of the {W}eddell {S}ea:
1922                      Large-Scale Circulation and Water Mass Distribution},
1923      journal =      jgr,
1924      year =         1999,
1925      volume =       104,
1926      number =       {C10},
1927      pages =        {23,375--23,392}
1928    }
1929    
1930    @Article{grosfeld97,
1931      author =       {Klaus Grosfeld and R{\"u}diger Gerdes and J{\"u}rgen
1932                      Determann},
1933      title =        {Thermohaline Circulation and Interaction between Ice
1934                      Shelf Cavities and the Adjacent Open Water},
1935      journal =      jgr,
1936      year =         1997,
1937      volume =       102,
1938      number =       {C7},
1939      pages =        {15,595--15,610}
1940    }
1941    
1942    @Article{hellmer89,
1943      author =       {Hartmut H. Hellmer and Dirk J. Olbers},
1944      title =        {A Two-Dimensional Model of the Thermohaline
1945                      Circulation Under an Ice Shelf},
1946      journal =      {Antarct. Sci.},
1947      year =         1989,
1948      volume =       1,
1949      pages =        {325--336}
1950    }
1951    
1952    @Article{holland99,
1953      author =       {David M. Holland and Adrian Jenkins},
1954      title =        {Modeling Thermodynamic Ice-Ocean Interactions at the
1955                      Base of an Ice Shelf},
1956      journal =      jpo,
1957      year =         1999,
1958      volume =       29,
1959      number =       8,
1960      pages =        {1787--1800}
1961  }  }
1962    
1963    @Article{jenkins01,
1964      author =       {Adrian Jenkins and Hartmut H. Hellmer and David
1965                      M. Holland},
1966      title =        {The Role of Meltwater Advection in the Formulation
1967                      of Conservative Boundary Conditions at an Ice-Ocean
1968                      Interface},
1969      journal =      jpo,
1970      year =         2001,
1971      volume =       31,
1972      pages =        {285--296}}
1973    
1974    @Article{losch08,
1975      author =       {Martin Losch},
1976      title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean
1977                      General Circulation Model},
1978      journal =      jgr,
1979      year =         2008,
1980      volume =       113,
1981      number =       {C08043},
1982      doi =          {10.1029/2007JC004368}
1983    }
1984    
1985    @Article{losch14:_jfnk,
1986      author =       {Martin Losch and Annika Fuchs and
1987                      Jean-Fran{\c{c}}ois Lemieux and Anna Vanselow},
1988      title =        {A Parallel {J}Acobian-Free {N}ewton-{K}rylov Solver
1989                      for a Coupled Sea Ice-Ocean Model },
1990      journal =      jcp,
1991      volume =       {257},
1992      number =       {A},
1993      pages =        {901--910},
1994      year =         {2014},
1995      doi =          {10.1016/j.jcp.2013.09.026}
1996    }
1997    
1998    @Article{lemieux09,
1999      author =       {Jean-Fran{\c{c}}ois Lemieux and Bruno Tremblay},
2000      title =        {Numerical Convergence of Viscous-Plastic Sea Ice
2001                      Models},
2002      journal =      jgr,
2003      year =         2009,
2004      volume =       114,
2005      number =       {C05009},
2006      doi =          {10.1029/2008JC005017}}
2007    
2008    @Article{lemieux10,
2009      author =       {Jean-Fran{\c{c}}ois Lemieux and Bruno Tremblay and Jan
2010                      Sedl{\'a}{\v{c}}ek and Paul Tupper and Stephen
2011                      Thomas and David Huard and Jean-Pierre Auclair},
2012      title =        {Improving the Numerical Convergence of
2013                      Viscous-Plastic Sea Ice Models with the
2014                      {J}acobian-Free {N}ewton-{K}rylov Method},
2015      journal =      jcp,
2016      year =         2010,
2017      volume =       229,
2018      pages =        {2840--2852},
2019      doi =          {10.1016/j.jcp.2009.12.011c}}
2020    
2021    @article{knoll04:_jfnk,
2022      Author =       {D.A. Knoll and D.E. Keyes},
2023      Title =        {{J}acobian-free {N}ewton-{K}rylov Methods: a Survey
2024                      of Approaches and Applications},
2025      Journal =      jcp,
2026      Year =         2004,
2027      Volume =       193,
2028      Pages =        {357--397},
2029      doi =          {10.1016/j.jcp.2003.08.010},
2030    }
2031    
2032    @Article{saad93:_fgmres,
2033      author =       {Y. Saad},
2034      title =        {A Flexible Inner-Outer Preconditioned {GMRES}
2035                      Method},
2036      journal =      siscicom,
2037      year =         1993,
2038      volume =       14,
2039      number =       2,
2040      pages =        {461--469}}
2041    
2042    @Article{Dutay02,
2043     author         = {Dutay, J.-C. and J.L. Bullister and S.C. Doney and J.C. Orr
2044        and R. Najjar and K. Caldeira and J.-M. Campin and H. Drange and M. Follows
2045        and Y. Gao and N. Gruber and M.W. Hecht and A. Ishida and F. Joos and K. Lindsay
2046        and G. Madec and E. Maier-Reimer and J.C. Marshall and R.J. Matear and P. Monfray
2047        and A. Mouchet and G.-K. Plattner and J. sarmiento and R. Schlitzer and R. Slater
2048        and I.J. Totterdell and M.-F. Weirig and Y. Yammanaka and A. Yool},
2049     year           = 2002,
2050     title          = {Evaluation of ocean model ventilation with CFC-11:
2051                       comparison of 13 global ocean models},
2052     journal        = om,
2053     volume         = {4},          number= {},             month   = {},
2054     pages          = {89-120}
2055                    }
2056    
2057    @Article{marsh06,
2058     author         = {Marshall, John and Emily Shuckburgh and Helen Jones and Chris Hill},
2059     year           = 2006,
2060     title          = {Estimates and Implications of Surface Eddy Diffusivity
2061                       in the Southern Ocean Derived from Tracer Transport},
2062     journal        = jpo,
2063     volume         = {36},          number= {},             month   = {},
2064     pages          = {1806-1821}
2065                    }
2066    
2067    @InProceedings{hoe-hill:99,
2068      author =       {Hoe, James C. and Chris Hill and Alistair Adcroft},
2069      title =        {A Personal Supercomputer for Climate Research},
2070      booktitle =    {In Proceedings of the ACM/IEEE Super-Computing Confrence},
2071      year =         1999,
2072      pages = {10.1109/SC.1999},
2073      publisher =    {IEEE},
2074    }
2075    
2076    @Article{stevens:90,
2077      author =       {Stevens, D. P.},
2078      title =        {On Open Boundary Conditions for Three Dimensional
2079                      Primitive Equation Ocean Circulation Models},
2080      journal =      {Geophys. Astrophys. Fl. Dyn.},
2081      year =         1990,
2082      volume =       51,
2083      pages =        {103--133}}
2084    
2085    @Article{kalnay96,
2086      author =       {E. Kalnay and M. Kanamitsu and R. Kistler and
2087                      W. Collins and D. Deaven and L. Gandin and
2088                      M. Iredell and S. Saha and G. White and J. Woollen
2089                      and Y. Zhu and M. Chelliah and W. Ebisuzaki and
2090                      W. Higgins and J. Janowiak and K. C. Mo and
2091                      C. Ropelewski and J. Wang and A. Leetmaa and
2092                      R. Reynolds and R. Jenne and D. Joseph},
2093      title =        {The {NMC/NCAR} 40-Year Reanalysis Project},
2094      journal =      bams,
2095      year =         1996,
2096      volume =       77,
2097      pages =        {437--471}
2098    }
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