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revision 1.27 by jmc, Tue Apr 4 20:14:03 2006 UTC revision 1.46 by jmc, Wed May 15 22:49:36 2013 UTC
# Line 1  Line 1 
1    @string{angl    = {Ann.\ Glaciol.}}
2  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}
3  @string{bams    = {Bull.~Am.~Met.~Soc.}}  @string{bams    = {Bull.~Am.~Met.~Soc.}}
4  @string{blm     = {Bound.~Layer~Meteorol.}}  @string{blm     = {Bound.~Layer~Meteorol.}}
5  @string{climd   = {Clim.~Dynamics}}  @string{climd   = {Clim.~Dynamics}}
6    @string{cch     = {Clim.\ Change}}
7  @string{jgr     = {J.~Geophys.~Res.}}  @string{jgr     = {J.~Geophys.~Res.}}
8  @string{ijrs    = {Int.~J.~Remote Sensing}}  @string{ijrs    = {Int.~J.~Remote Sensing}}
9  @string{jas     = {J.~Atmos.~Sci.}}  @string{jas     = {J.~Atmos.~Sci.}}
# Line 32  Line 34 
34  @string{estec   = {European Space Research and Technology Centre  @string{estec   = {European Space Research and Technology Centre
35                          (ESTEC)}}                          (ESTEC)}}
36  @string{esa     = {European Space Agency (ESA)}}  @string{esa     = {European Space Agency (ESA)}}
37    @string{eos     = {Eos~Trans.\ AGU}}
38    
39  @Article{bis-eta:92,  @Article{bis-eta:92,
40   author         = {C.H. Bishof and G.F. Corliss and L. Green and   author         = {C.H. Bishof and G.F. Corliss and L. Green and
# Line 43  Line 46 
46   volume         = {3},   volume         = {3},
47   pages          = {625--638},   pages          = {625--638},
48                    }                    }
49    
50  @incollection{bis:94,  @incollection{bis:94,
51   author         = {C.H. Bishof},   author         = {C.H. Bishof},
52   year           = 1994,   year           = 1994,
# Line 56  Line 59 
59   publisher      = {Kluwer},   publisher      = {Kluwer},
60   address        = {Dordrecht, NL},   address        = {Dordrecht, NL},
61                    }                    }
62    
63  @techreport{bis-eta:94,  @techreport{bis-eta:94,
64   author         = {C. Bishof and A. Carle and P. Khademi and   author         = {C. Bishof and A. Carle and P. Khademi and
65                    A. Maurer},                    A. Maurer},
# Line 67  Line 70 
70                    Computer Science Division},                    Computer Science Division},
71   type           = {Argonne Preprint},   type           = {Argonne Preprint},
72   number         = {ANL-MCS-P981-1194},   number         = {ANL-MCS-P981-1194},
73   address        = {ANL; 9700 South Cass Ave.;   address        = {ANL; 9700 South Cass Ave.;
74                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
75   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
76                    }                    }
77    
78    @ARTICLE{bryan:84,
79      author = {Kirk Bryan},
80      title = {Accelerating the convergence to equilibrium of Ocean-Climate Models},
81      journal = jpo,
82      year = {1984},
83      volume = {14},
84      number = {4},
85      pages = {666-673},
86    }
87    
88    @ARTICLE{bugi-hill:06,
89      author = {V. Bugnion and C. Hill},
90      title = {Equilibration mechanisms in an adjoint ocean general
91               circulation model},
92      journal = {Ocean Dynamics},
93      year = {2006},
94      volume = {56},
95      number = {1},
96      pages = {51-61},
97      doi   = {10.1007/s10236-005-0052-z},
98    }
99    
100  @techreport{bis-roh:97,  @techreport{bis-roh:97,
101   author         = {C. Bishof and L. Roh},   author         = {C. Bishof and L. Roh},
102   year           = 1997,   year           = 1997,
# Line 81  Line 106 
106                    Computer Science Division},                    Computer Science Division},
107   type           = {Argonne Preprint},   type           = {Argonne Preprint},
108   number         = {ANL-MCS-P626-1196},   number         = {ANL-MCS-P626-1196},
109   address        = {ANL; 9700 South Cass Ave.;   address        = {ANL; 9700 South Cass Ave.;
110                    Argonne (ILL), 90439; USA},                    Argonne (ILL), 90439; USA},
111   note           = {http://www.mcs.anl.gov/autodiff/},   note           = {http://www.mcs.anl.gov/autodiff/},
112                    }                    }
113    
114  @Article{cou-tal:87,  @Article{cou-tal:87,
115   author         = {P. Courtier and O. Talagrand},   author         = {P. Courtier and O. Talagrand},
116   year           = 1987,   year           = 1987,
117   title          = {Variational assimilation of meteorological   title          = {Variational assimilation of meteorological
118                    observations with the adjoint vorticity equation.                    observations with the adjoint vorticity equation.
119                    II: Numerical results},                    II: Numerical results},
120   journal        = qjrms,   journal        = qjrms,
121   volume         = {113},   volume         = {113},
122   pages          = {1329--1347},   pages          = {1329--1347},
123                    }                    }
124    
125  @Article{cou-tal:90,  @Article{cou-tal:90,
126   author         = {P. Courtier and O. Talagrand},   author         = {P. Courtier and O. Talagrand},
127   year           = 1990,   year           = 1990,
# Line 107  Line 132 
132   volume         = {42A},   volume         = {42A},
133   pages          = {531--549},   pages          = {531--549},
134                    }                    }
135    
136  @Article{cou-eta:94,  @Article{cou-eta:94,
137   author         = {P. Courtier and J.-N. Th{\'e}paut and   author         = {P. Courtier and J.-N. Th{\'e}paut and
138                    A. Hollingsworth},                    A. Hollingsworth},
# Line 118  Line 143 
143   volume         = {120},   volume         = {120},
144   pages          = {1367--1387},   pages          = {1367--1387},
145                    }                    }
146    
147    @ARTICLE{durr:91,
148      author = {Dale R. Durran},
149      title = {The Third-Order Adams-Bashforth Method: An Attractive Alternative
150               to Leapfrog Time Differencing},
151      journal = mwr,
152      year = {1991},
153      volume = {119},
154      pages  = {702-720},
155    }
156    
157    
158    @ARTICLE{dutk-etal:06,
159      author = {S. Dutkiewicz and M.J. Follows and P. Heimbach and J. Marshall},
160      title = {Controls on ocean productivity and air-sea carbon flux:
161               An adjoint model sensitivity study},
162      journal = grl,
163      year = {2006},
164      volume = {33},
165      pages  = {L02603},
166      doi    = {10.1029/2005GL024987},
167    }
168    
169  @Article{err:97,  @Article{err:97,
170   author         = {R.M. Errico},   author         = {R.M. Errico},
171   year           = 1997,   year           = 1997,
# Line 127  Line 174 
174   volume         = {78},   volume         = {78},
175   pages          = {2577--2591},   pages          = {2577--2591},
176                    }                    }
177    
178  @Article{far-moo:92,  @Article{far-moo:92,
179   author         = {B.F. Farrell and A.M. Moore},   author         = {B.F. Farrell and A.M. Moore},
180   year           = {1992},   year           = {1992},
# Line 137  Line 184 
184   volume         = {22},   volume         = {22},
185   pages          = {338--349},   pages          = {338--349},
186                    }                    }
187    
188  @Article{far-ioa:96a,  @Article{far-ioa:96a,
189   author         = {B.F. Farrell and P. Ioannou},   author         = {B.F. Farrell and P. Ioannou},
190   year           = {1996a},   year           = {1996a},
# Line 147  Line 194 
194   volume         = {53},   volume         = {53},
195   pages          = {2025--2040},   pages          = {2025--2040},
196                    }                    }
197    
198  @Article{far-ioa:96b,  @Article{far-ioa:96b,
199   author         = {B.F. Farrell and P. Ioannou},   author         = {B.F. Farrell and P. Ioannou},
200   year           = {1996b},   year           = {1996b},
# Line 157  Line 204 
204   volume         = {53},   volume         = {53},
205   pages          = {2041--2053},   pages          = {2041--2053},
206                    }                    }
207    
208  @techreport{fau-pap:98,  @techreport{fau-pap:98,
209   author         = {C. Faure and Y. Papegay},   author         = {C. Faure and Y. Papegay},
210   year           = 1998,   year           = 1998,
# Line 170  Line 217 
217                    06902 Sophia Antipolis Cedex; France},                    06902 Sophia Antipolis Cedex; France},
218   note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},   note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},
219                    }                    }
220    
221  @Article{fau:00,  @Article{fau:00,
222   author         = {C. Faure},   author         = {C. Faure},
223   year           = {2000},   year           = {2000},
# Line 178  Line 225 
225   journal        = {Optimisation Methods and Software},   journal        = {Optimisation Methods and Software},
226   note           = {in press},   note           = {in press},
227                    }                    }
228    
229    @Article{fer-eta:05,
230     author         = {D. Ferreira and J. Marshall and P. Heimbach},
231     year           = 2005,
232     title          = {Estimating Eddy Stresses by Fitting Dynamics to Observations
233                       using a Residual-Mean Ocean Circulation Model and Its Adjoint},
234     journal        = jpo,
235     volume         = {35},
236     pages          = {1891--1910},
237                      }
238    
239    @Article{gas-eta:90,
240     author         = {P. Gaspar and Y. Gr\'egoris and J.-M. Lefevre},
241     year           = 1990,
242     title          = {A Simple Eddy Kinetic Energy Model for Simulations of the
243                       Oceanic Vertical Mixing: Tests at Station Papa and Long-Term
244                       Upper Ocean Study Site},
245     journal        = jgr,
246     volume         = {95 (C9)},
247     pages          = {16,179--16,193},
248                      }
249    
250  @Article{gen-mcw:90,  @Article{gen-mcw:90,
251   author         = {P.R. Gent and J.C. McWilliams},   author         = {P. R. Gent and J. C. McWilliams},
252   year           = 1990,   year           = 1990,
253   title          = {Isopycnal mixing in ocean circulation models},   title          = {Isopycnal mixing in ocean circulation models},
254   journal        = jpo,   journal        = jpo,
255   volume         = {20},   volume         = {20},
256   pages          = {150--155},   pages          = {150--155},
257                    }                    }
258    
259  @Article{gen-eta:95,  @Article{gen-eta:95,
260   author         = {P.R. Gent and J. Willebrand and T.J. McDougall   author         = {P. R. Gent and J. Willebrand and T. J. McDougall and J. C. McWilliams},
                   and J.C. McWilliams},  
261   year           = 1995,   year           = 1995,
262   title          = {Parameterizing eddy-induced tracer transports in   title          = {Parameterizing eddy-induced tracer transports in ocean circulation models},
                   ocean circulation models},  
263   journal        = jpo,   journal        = jpo,
264   volume         = {25},   volume         = {25},
265   pages          = {463--474},   pages          = {463--474},
266                    }                    }
267    
268  @Article{gie-kam:98,  @Article{gie-kam:98,
269   author         = {R. Giering and T. Kaminski},   author         = {R. Giering and T. Kaminski},
270   year           = 1998,   year           = 1998,
# Line 211  Line 277 
277  @techreport{gie:99,  @techreport{gie:99,
278   author         = {R. Giering},   author         = {R. Giering},
279   year           = 1999,   year           = 1999,
280   title          = {Tangent linear and Adjoint Model Compiler.   title          = {Tangent linear and Adjoint Model Compiler.
281                    Users manual 1.4 (TAMC Version 5.2)},                    Users manual 1.4 (TAMC Version 5.2)},
282   institution    = {Massachusetts Institute of Technology},   institution    = {Massachusetts Institute of Technology},
283   type           = {Report},   type           = {Report},
# Line 220  Line 286 
286                    02139; USA},                    02139; USA},
287   note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},   note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},
288                    }                    }
289    
290  @incollection{gie:00,  @incollection{gie:00,
291   author         = {R. Giering},   author         = {R. Giering},
292   editor         = {P. Kasibhatla and M. Heimann and P. Rayner and   editor         = {P. Kasibhatla and M. Heimann and P. Rayner and
# Line 244  Line 310 
310   volume         = {45},   volume         = {45},
311   pages          = {407--435},   pages          = {407--435},
312                    }                    }
313    
314  @book{gil-eta:81,  @book{gil-eta:81,
315   author         = {P.E. Gill and W. Murray and M.H. Wright},   author         = {P.E. Gill and W. Murray and M.H. Wright},
316   title          = {Practical optimization},   title          = {Practical optimization},
317   year           = 1981,   year           = 1981,
318   publisher      = {Academic Press},   publisher      = {Academic Press},
319   address        = {London},   address        = {London},
320   pages          = {401 pp.},   pages          = {401 pp.},
321                    }                    }
322                                                                      
323  @incollection{gri:89,  @incollection{gri:89,
324   author         = {A. Griewank},   author         = {A. Griewank},
325   year           = 1989,   year           = 1989,
# Line 265  Line 331 
331   publisher      = {Kluwer},   publisher      = {Kluwer},
332   address        = {Dordrecht, NL},   address        = {Dordrecht, NL},
333                    }                    }
334    
335  @Article{gri:92,  @Article{gri:92,
336    author =       {A.~Griewank},    author =       {A.~Griewank},
337    title =        {Achieving logarithmic growth of temporal and spatial    title =        {Achieving logarithmic growth of temporal and spatial
# Line 284  Line 350 
350   series         = {Frontiers in Applied Mathematics},   series         = {Frontiers in Applied Mathematics},
351   volume         = {19},   volume         = {19},
352   publisher      = {SIAM},   publisher      = {SIAM},
353   address        = {Philadelphia},   address        = {Philadelphia},
354   pages          = {369 pp.},   pages          = {369 pp.},
355                    }                    }
356                                                                      
357  @Article{hal-eta:82,  @Article{hal-eta:82,
358   author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},   author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},
359   year           = 1982,   year           = 1982,
# Line 307  Line 373 
373    volume =       1,    volume =       1,
374    pages =        {241--248}    pages =        {241--248}
375  }  }
376    
377  @Article{held-suar:94,  @Article{held-suar:94,
378   author         = {I.M. Held and M.J. Suarez},   author         = {I.M. Held and M.J. Suarez},
379   year           = {1994},   year           = {1994},
# Line 316  Line 382 
382   volume         = {75(10)},   volume         = {75(10)},
383   pages          = {1825-1830}   pages          = {1825-1830}
384  }  }
385    
386  @Article{hil-eta:01,  @Article{hil-eta:01,
387   author         = {C. Hill and M. Follows and V. Bugnion and   author         = {C. Hill and M. Follows and V. Bugnion and
388                    J. Marshall},                    J. Marshall},
389   year           = {2002},   year           = {2002},
390   title          = {Spatial and Temporal Impacts of ocean general   title          = {Spatial and Temporal Impacts of ocean general
391                    circulation on carbon sequestration},                    circulation on carbon sequestration},
392   journal        = {Global Biogeochemical Cycles},   journal        = {Global Biogeochemical Cycles},
393   note           = {submitted},   note           = {submitted},
394                    }                    }
395    
396  @ARTICLE{hib80,  @ARTICLE{hib80,
397    AUTHOR      = "W. D. {Hibler, III}",    author =       {Hibler, III, William D.},
398    TITLE       = "Modeling a Variable Thickness Sea Ice Cover",    TITLE       = "Modeling a Variable Thickness Sea Ice Cover",
399    JOURNAL     = mwr,    JOURNAL     = mwr,
400    YEAR        = 1980,    YEAR        = 1980,
# Line 339  Line 405 
405  @Article{Holland75,  @Article{Holland75,
406   author         = {W.R. Holland and L. B. Lin},   author         = {W.R. Holland and L. B. Lin},
407   year           = {1975a},   year           = {1975a},
408   title          = {On the origin of mesoscale eddies and their contribution   title          = {On the origin of mesoscale eddies and their contribution
409                     to the general circulation of the ocean. I. A preliminary                     to the general circulation of the ocean. I. A preliminary
410                     numerical experiment},                     numerical experiment},
411   journal        = jpo,   journal        = jpo,
412   volume         = {5},   volume         = {5},
# Line 350  Line 416 
416  @Article{hol-lin:75b,  @Article{hol-lin:75b,
417   author         = {W.R. Holland and L. B. Lin},   author         = {W.R. Holland and L. B. Lin},
418   year           = {1975b},   year           = {1975b},
419   title          = {On the origin of mesoscale eddies and their contribution   title          = {On the origin of mesoscale eddies and their contribution
420                     to the general circulation of the ocean. II. A parameter                     to the general circulation of the ocean. II. A parameter
421                     study},                     study},
422   journal        = jpo,   journal        = jpo,
# Line 358  Line 424 
424   pages          = {658-669}   pages          = {658-669}
425                    }                    }
426    
427    @Article{jam-oze:86,
428     author         = {B.M. Jamart and J. Ozer},
429     year           = {1986},
430     title          = {Numerical boundary layers and spurious residual flows},
431     journal        = jgr,
432     volume         = {91},
433     pages          = {10,621-10,631}
434                      }
435    
436  @book{kas-eta:00,  @book{kas-eta:00,
437   author         = {P. Kasibhatla and M. Heimann and P. Rayner and   author         = {P. Kasibhatla and M. Heimann and P. Rayner and
438                    N. Mahowald and R.G. Prinn and D.E. Hartley},                    N. Mahowald and R.G. Prinn and D.E. Hartley},
# Line 373  Line 448 
448  @Article{lar-eta:94,  @Article{lar-eta:94,
449   author         = {W.G. Large and J.C. McWilliams and S.C. Doney},   author         = {W.G. Large and J.C. McWilliams and S.C. Doney},
450   year           = 1994,   year           = 1994,
451   title          = {Oceanic vertical mixing: A review and a model   title          = {Oceanic vertical mixing: A review and a model with nonlocal boundary layer parameterization},
                   with nonlocal boundary layer parameterization},  
452   journal        = {Rev.~Geophys.},   journal        = {Rev.~Geophys.},
453   volume         = {32},   volume         = {32},
454   pages          = {363--403},   pages          = {363--403},
455                    }                    }
456    
457  @Article{lar-eta:97,  @Article{lar-eta:97,
458   author         = {W.G. Large and G. Danabasoglu and S.C. Doney   author         = {W. G. Large and G. Danabasoglu and S. C. Doney
459                    and J.C. McWilliams},                    and J. C. McWilliams},
460   year           = 1997,   year           = 1997,
461   title          = {Sensitivity to surface forcing and boundary layer   title          = {Sensitivity to surface forcing and boundary layer
462                    mixing in a global ocean model: annual-mean                    mixing in a global ocean model: Annual-mean climatology},
                   climatology},  
463   journal        = jpo,   journal        = jpo,
464   volume         = {27},   volume         = {27},
465     number         = 11,
466   pages          = {2418--2447},   pages          = {2418--2447},
467                    }                    }
468    
469  @Article{led-tal:86,  @Article{led-tal:86,
470   author         = {F.-X. {Le Dimet} and O. Talagrand},   author         = {F.-X. {Le Dimet} and O. Talagrand},
471   year           = 1986,   year           = 1986,
# Line 432  Line 506 
506    OPTannote =    {}    OPTannote =    {}
507  }  }
508    
509    
510  @Article{lew-der:85,  @Article{lew-der:85,
511   author         = {J. Lewis and J. Derber},   author         = {J. Lewis and J. Derber},
512   year           = {1985},   year           = {1985},
# Line 442  Line 516 
516   volume         = {37A},   volume         = {37A},
517   pages          = {309--322},   pages          = {309--322},
518                    }                    }
519    
520  @techreport{lon:88,  @techreport{lon:88,
521   author         = {R.B. Long},   author         = {R.B. Long},
522   year           = 1988,   year           = 1988,
# Line 454  Line 528 
528   pages          = {38 pp.},   pages          = {38 pp.},
529   address        = {Delft (NL)},   address        = {Delft (NL)},
530                    }                    }
531    
532    @ARTICLE{losc-heim:06,
533      author =       {Martin Losch and Patrick Heimbach},
534      title =        {Adjoint Sensitivity of an Ocean General Circulation
535                      Model to Bottom Topography},
536      journal =      jpo,
537      year =         2007,
538      volume =       37,
539      doi =          {10.1175/JPO3017.1},
540      number =       2,
541      pages =        {377--393},
542      url    = {http://mitgcm.org/pdfs/Los2006a.pdf},
543    }
544    
545    
546  @Article{maro-wun:93,  @Article{maro-wun:93,
547   author         = {J. Marotzke and C. Wunsch},   author         = {J. Marotzke and C. Wunsch},
548   year           = 1993,   year           = 1993,
# Line 465  Line 553 
553   volume         = {98, C11},   volume         = {98, C11},
554   pages          = {20,149--20,167},   pages          = {20,149--20,167},
555                    }                    }
556    
557  @Article{maro-eta:99,  @Article{maro-eta:99,
558   author         = {J. Marotzke and R. Giering and K.Q. Zhang and   author         = {J. Marotzke and R. Giering and K.Q. Zhang and
559                    D. Stammer and C. Hill and T. Lee},                    D. Stammer and C. Hill and T. Lee},
560   year           = 1999,   year           = 1999,
561   title          = {Construction of the adjoint MIT ocean general   title          = {Construction of the adjoint MIT ocean general
# Line 477  Line 565 
565   volume         = {104, C12},   volume         = {104, C12},
566   pages          = {29,529--29,547},   pages          = {29,529--29,547},
567                    }                    }
568    
569  @Article{mars-eta:97a,  @Article{mars-eta:97a,
570   author         = {J. Marshall and C. Hill and L. Perelman and   author         = {J. Marshall and C. Hill and L. Perelman and
571                    A. Adcroft},                    A. Adcroft},
# Line 488  Line 576 
576   volume         = {102, C3},   volume         = {102, C3},
577   pages          = {5,733--5,752},   pages          = {5,733--5,752},
578                    }                    }
579    
580  @Article{mars-eta:97b,  @Article{mars-eta:97b,
581   author         = {J. Marshall and A. Adcroft and C. Hill and   author         = {J. Marshall and A. Adcroft and C. Hill and
582                    L. Perelman and C. Heisey},                    L. Perelman and C. Heisey},
583   year           = {1997b},   year           = {1997b},
584   title          = {Hydrostatic, quasi-hydrostatic and   title          = {Hydrostatic, quasi-hydrostatic and
# Line 499  Line 587 
587   volume         = {102, C3},   volume         = {102, C3},
588   pages          = {5,753--5,766},   pages          = {5,753--5,766},
589                    }                    }
590    
591  @Article{mars-sha:98,  @Article{mars-eta:98,
592   author         = {J. Marshall and H. Jones and C. Hill},   author         = {J. Marshall and H. Jones and C. Hill},
593   year           = 1998,   year           = 1998,
594   title          = {Efficient ocean modeling using   title          = {Efficient ocean modeling using
# Line 508  Line 596 
596   journal        = jms,   journal        = jms,
597   volume         = {18},   volume         = {18},
598   pages          = {115--134},   pages          = {115--134},
599     url            = {http://mitgcm.org/pdfs/journal_of_marine_systems_1998.pdf},
600     doi            = {10.1016/S0924-7963\%2898\%2900008-6},
601                    }                    }
602    
603  @Article{mcw:96,  @Article{mol:09,
604   author         = {J. McWilliams},   author         = {Andrea Molod},
605   year           = 1996,   year           = 2009,
606   title          = {Modeling the oceanic general circulation},   title          = {Running {GCM} physics and dynamics on different grids:
607   journal        = arfm,                     algorithm and tests},
608   volume         = {28},   journal        = tel,
609   pages          = {215--248},   volume         = {61A},
610     pages          = {381--393},
611                    }                    }
612    
613  %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies  %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
614  %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.  %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.
615  %% (Available from Unidata or in PostScript form by anonymous FTP from  %% (Available from Unidata or in PostScript form by anonymous FTP from
616  %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also  %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also
617  %%   a hypertext version of the User's Guide available at  %%   a hypertext version of the User's Guide available at
618  %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's  %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's
619  %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are  %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are
620  %%   also available.  %%   also available.
621    
622    @incollection{naum-etal:06,
623            Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout},
624            Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},
625            Editor = {{P. Wesseling, E. O~nate and J. Periaux}},
626            Pages = {~},
627            Publisher = {TU Delft},
628            Title = {Adjoint code by source transformation with OpenAD/F},
629            Year = {2006}}
630    
631    @Article{orl:76,
632     author         = {I. Orlanski},
633     year           = 1976,
634     title          = {A simple boundary condition for unbounded hyperbolic flows},
635     journal        = jcp,
636     volume         = {21},
637     pages          = {251--269},
638                    }
639    
640    @Article{pal-rom:97,
641     author         = {T. Paluszkiewicz and R.D. Romea},
642     year           = 1997,
643     title          = {A one-dimensional model for the parameterization
644                      of deep convection in the ocean},
645     journal        = dao,
646     volume         = {26},
647     pages          = {95--130},
648                      }
649    
650  @TechReport{rew:97,  @TechReport{rew:97,
651    author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},    author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
652    title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},    title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},
653                    An Interface for Data Access, Version 3},                    An Interface for Data Access, Version 3},
654    institution =  {Unidata Program Center},    institution =  {Unidata Program Center},
655    type =         {Report},    type =         {Report},
# Line 549  Line 668 
668   volume         = {19},   volume         = {19},
669   pages          = {1586--1605},   pages          = {1586--1605},
670                    }                    }
671    
672  @Article{ros-eta:93,  @Article{ros-eta:93,
673   author         = {N. Rostaing and S. Dalmas and A. Galligo},   author         = {N. Rostaing and S. Dalmas and A. Galligo},
674   year           = 1993,   year           = 1993,
# Line 558  Line 677 
677   volume         = {45A},   volume         = {45A},
678   pages          = {558--568},   pages          = {558--568},
679                    }                    }
680    
681  @incollection{she-and:89,  @incollection{she-and:89,
682   author         = {J. Sheinbaum and D.L.T. Anderson},   author         = {J. Sheinbaum and D.L.T. Anderson},
683   year           = 1989,   year           = 1989,
684   title          = {Assimilation of XBT data using a variational   title          = {Assimilation of XBT data using a variational
685                    technique},                    technique},
686   booktitle      = {Oceanic circulation models:   booktitle      = {Oceanic circulation models:
687                    Combining data and dynamics},                    Combining data and dynamics},
# Line 574  Line 693 
693   address        = {Berlin (Germany)},   address        = {Berlin (Germany)},
694                    }                    }
695    
696    @article{utke-etal:08,
697            Author = {J. Utke and U. Naumann and M. Fagan and N. Tallent and M. Strout and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch},
698            Date-Modified = {2007-11-19 10:15:08 -0500},
699            Journal = {{ACM} Transactions on Mathematical Software},
700            Pages = {~},
701            Title = {OpenAD/F: A modular open source tool for automatic differentiation of Fortran codes},
702            Volume = {34(4)},
703            Year = {2008}}
704    
705  @Article{DaSilva94,  @Article{DaSilva94,
706   author         = {A. da Silva and A. C. Young and S. Levitus},   author         = {A. da Silva and A. C. Young and S. Levitus},
707   year           = 1994,   year           = 1994,
# Line 583  Line 711 
711   publisher      = {U.S. Department of Commerce},   publisher      = {U.S. Department of Commerce},
712   address        = {Washington, D.C. (USA)},   address        = {Washington, D.C. (USA)},
713   note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},   note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
714     url            = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
715                    }                    }
716    
717  @techreport{sta-eta:97,  @techreport{stam-etal:97,
718   author         = {D. Stammer and C. Wunsch and R. Giering and   author         = {D. Stammer and C. Wunsch and R. Giering and
719                    Q. Zhang and J. Marotzke and J. Marshall and                    Q. Zhang and J. Marotzke and J. Marshall and
720                    C. Hill},                    C. Hill},
721   year           = 1997,   year           = 1997,
722   title          = {The global ocean circulation estimated from   title          = {The global ocean circulation estimated from
723                    TOPEX/POSEIDON altimetry and a general circulation                    TOPEX/POSEIDON altimetry and a general circulation
724                    model},                    model},
725   institution    = {Center for Global Change Science, Massachusetts   institution    = {Center for Global Change Science, Massachusetts
# Line 600  Line 729 
729   pages          = {40 pp.},   pages          = {40 pp.},
730   address        = {Cambridge (MA), USA},   address        = {Cambridge (MA), USA},
731                    }                    }
732    
733  @Article{sta-eta:01,  @ARTICLE{stam-etal:02,
734   author         = {D. Stammer and C. Wunsch and R. Giering and    author = {D. Stammer and C. Wunsch and R. Giering and C. Eckert and P. Heimbach and J. Marotzke and A. Adcroft and C.N. Hill and J. Marshall},
735                    C. Eckert and P. Heimbach and J. Marotzke and    title = {The global ocean circulation and transports during 1992 -- 1997, estimated from ocean observations and a general circulation model.},
736                    A. Adcroft and C. Hill and J. Marshall},    journal = jgr,
737   year           = 2001,    year = {2002a},
738   title          = {The global ocean circulation during 1992 -- 1997,    volume = {107(C9)},
739                    estimated from ocean observations and a general    pages = {3118},
740                    circulation model},    doi   = {10.1029/2001JC000888},
741   journal        = jgr,  }
742   note           = {in press},  
                   }  
743    
744  @Article{Stommel66,  @Article{Stommel66,
745   author         = {H. Stommel},   author         = {H. Stommel},
# Line 625  Line 753 
753  @Article{tal-cou:87,  @Article{tal-cou:87,
754   author         = {O. Talagrand and P. Courtier},   author         = {O. Talagrand and P. Courtier},
755   year           = 1987,   year           = 1987,
756   title          = {Variational assimilation of meteorological   title          = {Variational assimilation of meteorological
757                    observations with the adjoint vorticity equation.                    observations with the adjoint vorticity equation.
758                    I: Theory},                    I: Theory},
759   journal        = qjrms,   journal        = qjrms,
760   volume         = {113},   volume         = {113},
761   pages          = {1311--1328},   pages          = {1311--1328},
762                    }                    }
763    
764  @Article{tal:97,  @Article{tal:97,
765   author         = {O. Talagrand},   author         = {O. Talagrand},
766   year           = 1997,   year           = 1997,
# Line 641  Line 769 
769   volume         = {75},   volume         = {75},
770   pages          = {191--209},   pages          = {191--209},
771                    }                    }
772    
773  @book{tar:87,  @book{tar:87,
774   author         = {A. Tarantola},   author         = {A. Tarantola},
775   title          = {Inverse Problem Theory: Methods for data fitting   title          = {Inverse Problem Theory: Methods for data fitting
776                    and model parameter estimation},                    and model parameter estimation},
777   year           = 1987,   year           = 1987,
778   publisher      = {Elsevier},   publisher      = {Elsevier},
779   address        = {Amsterdam},   address        = {Amsterdam},
780   pages          = {629 pp.},   pages          = {629 pp.},
781                    }                    }
782                                                                      
783  @techreport{tha:87,  @techreport{tha:87,
784   author         = {W.C. Thacker},   author         = {W.C. Thacker},
785   year           = 1987,   year           = 1987,
# Line 663  Line 791 
791   pages          = {64 pp.},   pages          = {64 pp.},
792   address        = {Geesthacht (D)},   address        = {Geesthacht (D)},
793                    }                    }
794    
795  @Article{tha-lon:88,  @Article{tha-lon:88,
796   author         = {W.C. Thacker and R.B. Long},   author         = {W.C. Thacker and R.B. Long},
797   year           = 1988,   year           = 1988,
# Line 672  Line 800 
800   volume         = {93, C2},   volume         = {93, C2},
801   pages          = {1,227--1,240},   pages          = {1,227--1,240},
802                    }                    }
803    
804  @Article{tha:88,  @Article{tha:88,
805   author         = {W.C. Thacker},   author         = {W.C. Thacker},
806   year           = 1988,   year           = 1988,
# Line 682  Line 810 
810   volume         = {93},   volume         = {93},
811   pages          = {10,655--10,665},   pages          = {10,655--10,665},
812                    }                    }
813    
814  @Article{tha:89,  @Article{tha:89,
815   author         = {W.C. Thacker},   author         = {W.C. Thacker},
816   year           = 1989,   year           = 1989,
# Line 692  Line 820 
820   volume         = {94, C5},   volume         = {94, C5},
821   pages          = {6,177--6,196},   pages          = {6,177--6,196},
822                    }                    }
823    
824  @Article{tha-rag:94,  @Article{tha-rag:94,
825   author         = {W.C. Thacker and R. Raghunath},   author         = {W.C. Thacker and R. Raghunath},
826   year           = 1994,   year           = 1994,
# Line 702  Line 830 
830   volume         = {99, C5},   volume         = {99, C5},
831   pages          = {10,131--10,141},   pages          = {10,131--10,141},
832                    }                    }
833    
834  @Article{tzi-tha:89,  @Article{tzi-tha:89,
835   author         = {E. Tziperman and W.C. Thacker},   author         = {E. Tziperman and W.C. Thacker},
836   year           = {1989},   year           = {1989},
# Line 712  Line 840 
840   volume         = {19},   volume         = {19},
841   pages          = {1471--1485},   pages          = {1471--1485},
842                    }                    }
843    
844  @Article{tzi-eta:92a,  @Article{tzi-eta:92a,
845   author         = {E. Tziperman and W.C. Thacker and R.B. Long and   author         = {E. Tziperman and W.C. Thacker and R.B. Long and
846                    S. Hwang},                    S. Hwang},
# Line 723  Line 851 
851   volume         = {22},   volume         = {22},
852   pages          = {1434--1457},   pages          = {1434--1457},
853                    }                    }
854    
855  @Article{tzi-eta:92b,  @Article{tzi-eta:92b,
856   author         = {E. Tziperman and W.C. Thacker and R.B. Long and   author         = {E. Tziperman and W.C. Thacker and R.B. Long and
857                    S. Hwang and S.R. Rintoul},                    S. Hwang and S.R. Rintoul},
# Line 734  Line 862 
862   volume         = {22},   volume         = {22},
863   pages          = {1458--1485},   pages          = {1458--1485},
864                    }                    }
865    
866  @book{wun:96,  @book{wun:96,
867   author         = {C. Wunsch},   author         = {C. Wunsch},
868   title          = {The ocean circulation inverse problem},   title          = {The ocean circulation inverse problem},
869   year           = 1996,   year           = 1996,
870   publisher      = cup,   publisher      = cup,
871   address        = {Cambridge (UK)},   address        = {Cambridge (UK)},
872   pages          = {442 pp.},   pages          = {442 pp.},
873                    }                    }
874                                                                      
875  @Article{zha-mar:99,  @Article{zha-mar:99,
876   author         = {K.Q. Zhang and J. Marotzke},   author         = {K.Q. Zhang and J. Marotzke},
877   year           = 1999,   year           = 1999,
# Line 777  Line 905 
905    year =         1997,    year =         1997,
906    volume =       102,    volume =       102,
907    number =       {C3},    number =       {C3},
908    pages =        {5733-5752}    pages =        {5733-5752},
909      url      =     {http://mitgcm.org/pdfs/96JC02775.pdf},
910  }  }
911    
912  @Article{marshall:97b,  @Article{marshall:97b,
# Line 788  Line 917 
917    year =         1997,    year =         1997,
918    volume =       102,    volume =       102,
919    number =       {C3},    number =       {C3},
920    pages =        {5753-5766}    pages =        {5753-5766},
921      url      =     {http://mitgcm.org/pdfs/96JC02776.pdf},
922  }  }
923    
924  @Article{adcroft:97,  @Article{adcroft:97,
# Line 798  Line 928 
928    journal =      mwr,    journal =      mwr,
929    year =         1997,    year =         1997,
930    volume =       125,    volume =       125,
931    pages =        {2293-2315}    pages =        {2293-2315},
932      url   =        {http://mitgcm.org/pdfs/mwr_1997.pdf},
933      doi       =    {10.1175/1520-0493\%281997\%29125<2293:ROTBSC>2.0.CO;2},
934  }  }
935    
936  @Article{adcroft:04a,  @Article{adcroft:04a,
# Line 808  Line 940 
940    journal =      om,    journal =      om,
941    year =         2004,    year =         2004,
942    volume =       7,    volume =       7,
943    pages =        {269-284}    pages =        {269-284},
944      doi   =        {10.1016/j.ocemod.2003.09.003},
945  }  }
946    
947  @Article{adcroft:04b,  @Article{adcroft:04b,
# Line 818  Line 951 
951    journal =      mwr,    journal =      mwr,
952    year =         2004,    year =         2004,
953    volume =       132,    volume =       132,
954    pages =        {2845-2863}    pages =        {2845-2863},
955      url   =        {http://mitgcm.org/pdfs/mwr_2004.pdf},
956      doi     =      {10.1175/MWR2823.1},
957    }
958    
959    @inproceedings{adcroft:04c,
960      author =       {Adcroft, A. and C. Hill and J.-M. Campin and J. Marshall
961                      and P. Heimbach},
962      title =        {Overview of the Formulation and Numerics of the {MIT}GCM},
963      booktitle =   {Proceedings of the ECMWF seminar series on Numerical Methods,
964                     Recent developments in numerical methods for atmosphere and
965                     ocean modelling},
966      year =         2004,
967      pages =        {139-149},
968      url   =        {http://mitgcm.org/pdfs/ECMWF2004-Adcroft.pdf},
969     publisher =     ecmwf
970  }  }
971    
972  @Article{marshall:04,  @Article{marshall:04,
# Line 827  Line 975 
975    journal =      mwr,    journal =      mwr,
976    year =         2004,    year =         2004,
977    volume =       132,    volume =       132,
978    pages =        {2882-2894}    pages =        {2882-2894},
979      url   =        {http://mitgcm.org/pdfs/a_o_iso.pdf},
980      doi    =       {10.1175/MWR2835.1},
981  }  }
982    
983  @Article{visbeck:97,  @Article{visbeck:97,
984    author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall},    author =       {M. Visbeck and J. Marshall and T. Haine and M. Spall},
985    title =        {Specification of eddy transfer coefficients in    title =        {Specification of eddy transfer coefficients in coarse-resolution ocean circulation models},
                   coarse-resolution ocean circulation models},  
986    journal =      jpo,    journal =      jpo,
987    year =         1997,    year =         1997,
988    volume =       27,    volume =       27,
# Line 854  Line 1003 
1003    pages =        {1-51}    pages =        {1-51}
1004  }  }
1005    
 @Article{marshall:98,  
   author =       {J. Marshall and H. Jones and C. Hill},  
   title =        {Efficient ocean modeling using non-hydrostatic algorithms},  
   journal =      {JMR},  
   year =         1998,  
   volume =       18,  
   pages =        {115-134}  
 }  
   
1006  @Article{mjn:99,  @Article{mjn:99,
1007    author =       {Marshall, J., Jamous, D and J. Nilsson},    author =       {Marshall, J., Jamous, D and J. Nilsson},
1008    title =        {Reconciling `thermodynamic' and `dynamic' methods of    title =        {Reconciling `thermodynamic' and `dynamic' methods of
# Line 890  Line 1030 
1030    journal =      mwr,    journal =      mwr,
1031    year =         1999,    year =         1999,
1032    volume =       127,    volume =       127,
1033    pages =        {1928-1936}    pages =        {1928-1936},
1034      url   =        {http://mitgcm.org/pdfs/mwr_1999.pdf},
1035      doi   =        {10.1175/1520-0493\%281999\%29127<1928:ANTOTC>2.0.CO;2},
1036  }  }
1037    
1038  @InProceedings{hill:99,  @InProceedings{hill:99,
# Line 980  Line 1122 
1122    
1123  @Article{griffies:00,  @Article{griffies:00,
1124    author =       {Griffies, S.,M. and Hallberg, R.,W.},    author =       {Griffies, S.,M. and Hallberg, R.,W.},
1125    title =        {Biharmonic friction with a Smagorinsky-like viscosity for    title =        {Biharmonic friction with a {Smagorinsky}-like viscosity for
1126                    use in large-scale eddy-permitting ocean models},                    use in large-scale eddy-permitting ocean models},
1127    journal =      mwr,    journal =      mwr,
1128    year =         2000,    year =         2000,
# Line 1009  Line 1151 
1151    pages =        {221-244}    pages =        {221-244}
1152  }  }
1153    
1154    @Article{Cox87,
1155      author =       {M. D. Cox},
1156      title =        {An isopycnal diffusion in a z-coordinate ocean model},
1157      journal =      {Ocean modelling},
1158      year =         1987,
1159      volume =       74,
1160      pages =        {1-5 (Unpublished manuscript)}
1161    }
1162    
1163    @Article{gretal:98,
1164      author =       {S. M. Griffies and A. Gnanadesikan and R. C. Pacanowski and V. Larichev and J.  K. Dukowicz and R. D. Smith},
1165      title =        {Isoneutral diffusion in a z-coordinate ocean model},
1166      journal =      jpo,
1167      year =         1998,
1168      volume =       28,
1169      pages =        {805-830}
1170    }
1171    
1172    @ARTICLE{gr:98,
1173      author =       {S. M. Griffies},
1174      title =        {The {Gent-McWilliams} Skew Flux},
1175      journal =      jpo,
1176      year =         1998,
1177      volume =       28,
1178      pages =        {831-841}
1179    }
1180    
1181    
1182    @Article{gkw:91,
1183      author =       {R. Gerdes and C. Koberle and J. Willebrand},
1184      title =        {The influence of numerical advection schemes on the results of ocean general circulation models},
1185      journal =      climd,
1186      year =         1991,
1187      volume =       5,
1188      number =       4,
1189      pages =        {211-226},
1190      doi   =        {10.1007/BF00210006}
1191    }
1192    
1193  @Article{dm:95,  @Article{dm:95,
1194    author =       {Danabasoglu, G. and McWilliams J.C.},    author =       {G. Danabasoglu and J. C. McWilliams},
1195    title =        {Sensitivity of the global ocean circulation to parameterizations of mesoscale tracer transports},    title =        {Sensitivity of the global ocean circulation to parameterizations of mesoscale tracer transports},
1196    journal =      jclim,    journal =      jclim,
1197    year =         1995,    year =         1995,
# Line 1019  Line 1200 
1200    pages =        {2967-2987}    pages =        {2967-2987}
1201  }  }
1202    
 @Article{ldd:97,  
   author =       {Large, W.G. and Danabasoglu, G. and Doney, S.C. and McWilliams, J.C.},  
   title =        {Sensitivity to surface forcing and boundary layer mixing in a global ocean model: Annual-mean climatology},  
   journal =      jpo,  
   year =         1997,  
   volume =       27,  
   number =       11,  
   pages =        {2418-2447}  
 }  
   
1203  @Article{gkw:99,  @Article{gkw:99,
1204    author =       {Gerdes R. and Koberle C. and Beckmann A. and Herrmann P. and Willebrand J.},    author =       {R. Gerdes and C. Koberle and A. Beckmann and P. Herrmann and J. Willebrand},
1205    title =        {Mechanisms for spreading of Mediterranean water in    title =        {Mechanisms for spreading of Mediterranean water in coarse-resolution numerical models},
                   coarse-resolution numerical models},  
1206    journal =      jpo,    journal =      jpo,
1207    year =         1999,    year =         1999,
1208    volume =       29,    volume =       29,
# Line 1065  Line 1235 
1235    
1236  @Article{molteni:03,  @Article{molteni:03,
1237    author =       {F. Molteni},    author =       {F. Molteni},
1238    title =        {Atmospheric simulations using a GCM with simplified physical    title =        {Atmospheric simulations using a {GCM} with simplified physical
1239                    parametrizations, I: Model climatology and variability in                    parametrization, {I}: Model climatology and variability in
1240                    multidecadal experiments},                    multidecadal experiments},
1241    journal =      climd,    journal =      climd,
1242    year =         2003,    year =         2003,
# Line 1136  Line 1306 
1306  }  }
1307    
1308  @ARTICLE{zha98a,  @ARTICLE{zha98a,
1309    AUTHOR      = "J. Zhang and W. D. {Hibler, III} and M. Steele    AUTHOR      = "J. Zhang and Hibler, III, W. D. and M. Steele
1310                   and D. A. Rothrock",                   and D. A. Rothrock",
1311    TITLE       = "Arctic ice-ocean modeling with and without climate restoring",    TITLE       = "Arctic ice-ocean modeling with and without climate restoring",
1312    JOURNAL     = jpo,    JOURNAL     = jpo,
# Line 1164  Line 1334 
1334    PAGES       = "525-531"    PAGES       = "525-531"
1335  }  }
1336    
1337  @ARTICLE{hib79,  @ARTICLE{hib79,
1338    AUTHOR      = "W. D. {Hibler, III}",    author =       {Hibler, III, W. D.},
1339    TITLE       = "A Dynamic Thermodynamic Sea Ice Model",    TITLE       = "A Dynamic Thermodynamic Sea Ice Model",
1340    JOURNAL     = jpo,    JOURNAL     = jpo,
1341    YEAR        = 1979,    YEAR        = 1979,
# Line 1174  Line 1344 
1344  }  }
1345    
1346  @ARTICLE{fla92,  @ARTICLE{fla92,
1347    AUTHOR      = "G. M. Flato and W. D. {Hibler, III}",    AUTHOR      = "G. M. Flato and Hibler, III, W. D.",
1348    TITLE       = "Modeling pack ice as a cavitating fluid",    TITLE       = "Modeling pack ice as a cavitating fluid",
1349    JOURNAL     = jpo,    JOURNAL     = jpo,
1350    YEAR        = 1992,    YEAR        = 1992,
# Line 1188  Line 1358 
1358    JOURNAL     = jpo,    JOURNAL     = jpo,
1359    YEAR        = 1997,    YEAR        = 1997,
1360    VOLUME      = 27,    VOLUME      = 27,
1361    PAGES       = "1849-1867"    PAGES       = "1849--1867"
1362    }
1363    
1364    @Article{hun01,
1365      author =       {Elizabeth C. Hunke},
1366      title =        {Viscous-Plastic Sea Ice Dynamics with the {EVP}
1367                      Model: Linearization Issues},
1368      journal =      jcp,
1369      year =         2001,
1370      volume =       170,
1371      pages =        {18--38},
1372      doi =          {10.1006/jcph.2001.6710}
1373  }  }
1374    
1375  @ARTICLE{zha00,  @ARTICLE{zha00,
# Line 1197  Line 1378 
1378    JOURNAL     = jgr,    JOURNAL     = jgr,
1379    YEAR        = 2000,    YEAR        = 2000,
1380    VOLUME      = 105,    VOLUME      = 105,
1381    PAGES       = "3325-3338"    PAGES       = "3325--3338"
1382  }  }
1383    
1384  @Article{Shapiro_70,  @Article{Shapiro_70,
# Line 1212  Line 1393 
1393    
1394  @TechReport{Dutkiewicz_etal_05,  @TechReport{Dutkiewicz_etal_05,
1395    author =       {S. Dutkiewicz and A. Sokolov and J. Scott and P. Stone},    author =       {S. Dutkiewicz and A. Sokolov and J. Scott and P. Stone},
1396    title =        {A Three-Dimensional Ocean-Seaice-Carbon Cycle Model and    title =        {A Three-Dimensional Ocean-Seaice-Carbon Cycle Model and
1397                    its Coupling to a Two-Dimensional Atmospheric Model: Uses                    its Coupling to a Two-Dimensional Atmospheric Model: Uses
1398                    in Climate Change Studies, Report 122},                    in Climate Change Studies, Report 122},
1399    institution =  {MIT Joint Program of the Science and Policy of Global Change},    institution =  {MIT Joint Program of the Science and Policy of Global Change},
1400    year =         {2005},    year =         {2005},
# Line 1236  Line 1417 
1417    
1418  @Article{McKinley_etal_04,  @Article{McKinley_etal_04,
1419    author =       {G. McKinley and M. J. Follows and J. C. Marshall},    author =       {G. McKinley and M. J. Follows and J. C. Marshall},
1420    title =        {Mechanisms of air-sea CO$_2$ flux variability in the    title =        {Mechanisms of air-sea CO$_2$ flux variability in the
1421                    Equatorial Pacific and the North Atlantic},                    Equatorial Pacific and the North Atlantic},
1422    journal =      {Global Biogeochemical Cycles},    journal =      {Global Biogeochemical Cycles},
1423    year =         {2004},    year =         {2004},
# Line 1278  Line 1459 
1459   editor       = {Pfafflin and Zeigler},   editor       = {Pfafflin and Zeigler},
1460   publisher    = {Gordon and Breach, Scientific Publishers}   publisher    = {Gordon and Breach, Scientific Publishers}
1461  }  }
1462    
1463  @Article{chou:92,  @Article{chou:92,
1464   author       = {M-D. Chou},   author       = {M-D. Chou},
1465   year         = {1992},   year         = {1992},
1466   title        = {A solar radiation model for use in climate studies.},   title        = {A solar radiation model for use in climate studies.},
1467   journal      = jas,   journal      = jas,
1468   volume       = {49},   volume       = {49},
1469   pages        = {762-772}   pages        = {762-772}
1470  }  }
# Line 1303  Line 1484 
1484   year         = {1994},   year         = {1994},
1485   title        = {An efficient thermal infrared radiation parameterization   title        = {An efficient thermal infrared radiation parameterization
1486  for use in general circulation models},  for use in general circulation models},
1487   institution  = {National Aeronautics and Space Administration},   institution  = {National Aeronautics and Space Administration},
1488   type         = {NASA Technical Memorandum},   type         = {NASA Technical Memorandum},
1489   number       = {104606-Vol 3},   number       = {104606-Vol 3},
1490   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1491   note         = {http://www.gmao.nasa.gov/}   note         = {http://www.gmao.nasa.gov/}
1492  }  }
# Line 1314  for use in general circulation models}, Line 1495  for use in general circulation models},
1495   author       = {R. H. Clarke},   author       = {R. H. Clarke},
1496   year         = {1970},   year         = {1970},
1497   title        = {Observational studies in the atmospheric boundary layer.},   title        = {Observational studies in the atmospheric boundary layer.},
1498   journal      = qjrms,   journal      = qjrms,
1499   volume       = {96},   volume       = {96},
1500   pages        = {91-114}   pages        = {91-114}
1501  }  }
# Line 1325  for use in general circulation models}, Line 1506  for use in general circulation models},
1506   title        = {NDVI-derived Land Cover Classification at Global Scales. },   title        = {NDVI-derived Land Cover Classification at Global Scales. },
1507   journal      = {Int'l J. Rem. Sens.} ,   journal      = {Int'l J. Rem. Sens.} ,
1508   volume       = {15},   volume       = {15},
1509   pages        = {3567-3586}   pages        = {3567-3586}
1510  }  }
1511    
1512  @Article{dorsell:89,  @Article{dorsell:89,
1513   author       = { J. L. Dorman and P. J. Sellers},   author       = { J. L. Dorman and P. J. Sellers},
1514   year         = {1989},   year         = {1989},
1515   title        = {A global climatology of albedo, roughness length and stomatal   title        = {A global climatology of albedo, roughness length and stomatal
1516  resistance for atmospheric general circulation models as represented by the Simple Biosphere model (SiB).},  resistance for atmospheric general circulation models as represented by the Simple Biosphere model (SiB).},
1517   journal      = jam,   journal      = jam,
1518   volume       = {28},   volume       = {28},
1519   pages        = {833-855}   pages        = {833-855}
1520  }  }
# Line 1343  resistance for atmospheric general circu Line 1524  resistance for atmospheric general circu
1524   year         = {1988},   year         = {1988},
1525   title        = { Design of a non-singular level 2.5 second-order closure   title        = { Design of a non-singular level 2.5 second-order closure
1526  model for the prediction of atmospheric turbulence. },  model for the prediction of atmospheric turbulence. },
1527   journal      = jas,   journal      = jas,
1528   volume       = {45},   volume       = {45},
1529   pages        = {113-132}   pages        = {113-132}
1530  }  }
# Line 1373  Continental Moisture Budget of the Unite Line 1554  Continental Moisture Budget of the Unite
1554   author       = {J. Kondo},   author       = {J. Kondo},
1555   year         = {1975},   year         = {1975},
1556   title        = {Air-sea bulk transfer coefficients in diabatic conditions.},   title        = {Air-sea bulk transfer coefficients in diabatic conditions.},
1557   journal      = blm,   journal      = blm,
1558   volume       = {9},   volume       = {9},
1559   pages        = {91-112}   pages        = {91-112}
1560  }  }
# Line 1382  Continental Moisture Budget of the Unite Line 1563  Continental Moisture Budget of the Unite
1563   author       = { Randal D. Koster and Max J. Suarez},   author       = { Randal D. Koster and Max J. Suarez},
1564   year         = {1991},   year         = {1991},
1565   title        = { A Simplified Treatment of SiB's Land Surface Albedo Parameterization.},   title        = { A Simplified Treatment of SiB's Land Surface Albedo Parameterization.},
1566   institution  = {National Aeronautics and Space Administration},   institution  = {National Aeronautics and Space Administration},
1567   type         = {NASA Technical Memorandum},   type         = {NASA Technical Memorandum},
1568   number       = {104538},   number       = {104538},
1569   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1570   note         = {http://www.gmao.nasa.gov/},   note         = {http://www.gmao.nasa.gov/},
1571  }  }
# Line 1404  in Climate Models as a Composite of Inde Line 1585  in Climate Models as a Composite of Inde
1585   year         = {1974},   year         = {1974},
1586   title        = { A parameterization for the absorption of solar radiation   title        = { A parameterization for the absorption of solar radiation
1587  in the Earth's atmosphere.  },  in the Earth's atmosphere.  },
1588   journal      = jas,   journal      = jas,
1589   volume       = {31},   volume       = {31},
1590   pages        = {118-133}   pages        = {118-133}
1591  }  }
# Line 1413  in the Earth's atmosphere.  }, Line 1594  in the Earth's atmosphere.  },
1594   author       = {W. G. Large and S. Pond},   author       = {W. G. Large and S. Pond},
1595   year         = {1981},   year         = {1981},
1596   title        = {Open ocean momentum flux measurements in moderate to strong winds.},   title        = {Open ocean momentum flux measurements in moderate to strong winds.},
1597   journal      = jpo,   journal      = jpo,
1598   volume       = {11},   volume       = {11},
1599   pages        = {324-336}   pages        = {324-336}
1600  }  }
# Line 1423  in the Earth's atmosphere.  }, Line 1604  in the Earth's atmosphere.  },
1604   year         = {1992},   year         = {1992},
1605   title        = {  Relaxed Arakawa Schubert: A parameterization of moist   title        = {  Relaxed Arakawa Schubert: A parameterization of moist
1606  convection for general circulation models.},  convection for general circulation models.},
1607   journal      = mwr,   journal      = mwr,
1608   volume       = {120},   volume       = {120},
1609   pages        = {978-1002}   pages        = {978-1002}
1610  }  }
# Line 1441  convection for general circulation model Line 1622  convection for general circulation model
1622   author       = {R. W. Reynolds and T. M. Smith},   author       = {R. W. Reynolds and T. M. Smith},
1623   year         = {1994},   year         = {1994},
1624   title        = {Improved global sea surface temperature analyses using optimum interpolation.},   title        = {Improved global sea surface temperature analyses using optimum interpolation.},
1625   journal      = jclim,   journal      = jclim,
1626   volume       = {7},   volume       = {7},
1627   pages        = {929-948}   pages        = {929-948}
1628  }  }
# Line 1451  convection for general circulation model Line 1632  convection for general circulation model
1632   year         = {1987},   year         = {1987},
1633   title        = {  A computation of the stratospheric   title        = {  A computation of the stratospheric
1634  diabatic circulation using an accurate radiative transfer model},  diabatic circulation using an accurate radiative transfer model},
1635   journal      = jas,   journal      = jas,
1636   volume       = {44},   volume       = {44},
1637   pages        = {859-876}   pages        = {859-876}
1638  }  }
# Line 1461  diabatic circulation using an accurate r Line 1642  diabatic circulation using an accurate r
1642   year         = {1988},   year         = {1988},
1643   title        = {  The roles of dry convection, cloud-radiation feedback processes   title        = {  The roles of dry convection, cloud-radiation feedback processes
1644  and the influence of recent improvements in the parameterization of convection in the GLA GCM.  },  and the influence of recent improvements in the parameterization of convection in the GLA GCM.  },
1645   journal      = mwr,   journal      = mwr,
1646   volume       = {116},   volume       = {116},
1647   pages        = {2366-2387}   pages        = {2366-2387}
1648  }  }
# Line 1471  and the influence of recent improvements Line 1652  and the influence of recent improvements
1652   year         = {1996},   year         = {1996},
1653   title        = {  Dynamical aspects of climate simulations Using the GEOS   title        = {  Dynamical aspects of climate simulations Using the GEOS
1654  General Circulation Model},  General Circulation Model},
1655   institution  = {National Aeronautics and Space Administration},   institution  = {National Aeronautics and Space Administration},
1656   type         = {NASA Technical Memorandum},   type         = {NASA Technical Memorandum},
1657   number       = {104606 Volume 10},   number       = {104606 Volume 10},
1658   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},   address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
1659   note         = {http://www.gmao.nasa.gov/},   note         = {http://www.gmao.nasa.gov/},
1660  }  }
# Line 1483  General Circulation Model}, Line 1664  General Circulation Model},
1664   year         = {1974},   year         = {1974},
1665   title        = {Heat and mass transfer between a rough wall and   title        = {Heat and mass transfer between a rough wall and
1666  turbulent fluid flow at high Reynolds and Peclet numbers.  },  turbulent fluid flow at high Reynolds and Peclet numbers.  },
1667   journal      = jfm,   journal      = jfm,
1668   volume       = {62},   volume       = {62},
1669   pages        = {601-623}   pages        = {601-623}
1670  }  }
# Line 1493  turbulent fluid flow at high Reynolds an Line 1674  turbulent fluid flow at high Reynolds an
1674   year         = {1977},   year         = {1977},
1675   title        = {  A numerical experiment on pollutant dispersion in a horizontally-homogenious   title        = {  A numerical experiment on pollutant dispersion in a horizontally-homogenious
1676  atmospheric boundary layer.},  atmospheric boundary layer.},
1677   journal      = {Atmos. Environ.},   journal      = {Atmos. Environ.},
1678   volume       = {11},   volume       = {11},
1679   pages        = {1015-1024}   pages        = {1015-1024}
1680  }  }
# Line 1502  atmospheric boundary layer.}, Line 1683  atmospheric boundary layer.},
1683   author       = {J. Zhou and Y.C. Sud and K.-M. Lau},   author       = {J. Zhou and Y.C. Sud and K.-M. Lau},
1684   year         = {1995},   year         = {1995},
1685   title        = {Impact of Orographically Induced Gravity Wave Drag in the GLA GCM},   title        = {Impact of Orographically Induced Gravity Wave Drag in the GLA GCM},
1686   journal      = qjrms,   journal      = qjrms,
1687   volume       = {122},   volume       = {122},
1688   pages        = {903-927}   pages        = {903-927}
1689  }  }
1690    
1691  @Article{breth:99,  @Article{breth:99,
1692   author         = {C. S. Bretherton and M.K. MacVean and P. Bechtold and A. Chlond   author         = {C. S. Bretherton and M.K. MacVean and P. Bechtold and A. Chlond
1693                     and W.R. Cotton and J. Cuxart and H. Cuijpers and M. Khairoutdinov                     and W.R. Cotton and J. Cuxart and H. Cuijpers and M. Khairoutdinov
1694                     and B. Kosovic and D. Lewellen and C-H. Moeng and P. Siebesma and                     and B. Kosovic and D. Lewellen and C-H. Moeng and P. Siebesma and
1695                     B. Stevens and D.E. Stevens and I. Sykes and M.C. Wyant},                     B. Stevens and D.E. Stevens and I. Sykes and M.C. Wyant},
1696   year           = 1999,   year           = 1999,
1697   title          = {An intercomparison of radiatively driven entrainment and turbulence   title          = {An intercomparison of radiatively driven entrainment and turbulence
1698                    in a smoke cloud, as simulated by different numerical models.},                    in a smoke cloud, as simulated by different numerical models.},
1699   journal        = qjrms,   journal        = qjrms,
1700   volume         = {125},   volume         = {125},
1701   pages          = {391-423}   pages          = {391-423}
1702                    }                    }
1703    
1704  @Article{bm:99,  @Article{bm:99,
1705   author         = {A. C. Bushell and G.M. Martin},   author         = {A. C. Bushell and G.M. Martin},
1706   year           = 1999,   year           = 1999,
1707   title          = {The Impact of Vertical Resolution Upon GCM Simulations of Marine Stratocumulus.},   title          = {The Impact of Vertical Resolution Upon GCM Simulations of Marine Stratocumulus.},
1708   journal        = {Climate Dyn.},   journal        = {Climate Dyn.},
1709   volume         = {15},   volume         = {15},
1710   pages          = {293-318}   pages          = {293-318}
1711                    }                    }
1712    
1713  @Article{Inn:01,  @Article{Inn:01,
1714   author         = {P. M. Inness and S.J. Slingo and R.B. Woolnough and B. Neale and V.D. Pope},   author         = {P. M. Inness and S.J. Slingo and R.B. Woolnough and B. Neale and V.D. Pope},
1715   year           = 2001,   year           = 2001,
1716   title          = {Organization of Tropical Convection in a GCM with Verying Vertical Resolution;   title          = {Organization of Tropical Convection in a GCM with Verying Vertical Resolution;
1717                    Implications for the Simulation of the Madden-Julian Oscillation.},                    Implications for the Simulation of the Madden-Julian Oscillation.},
1718   journal        = {Climate Dyn.},   journal        = {Climate Dyn.},
1719   volume         = {17},   volume         = {17},
1720   pages          = {777-794}   pages          = {777-794}
1721                    }                    }
1722    
1723  @Article{kal:89,  @Article{kal:89,
1724   author         = {E. Kalnay and M. Kanamitsu and J. Pfaendtner and J. Sela and M. Suarez and   author         = {E. Kalnay and M. Kanamitsu and J. Pfaendtner and J. Sela and M. Suarez and
1725                     J. Stackpole and J. Tucillo and L. Umscheid and and D. Williamson},                     J. Stackpole and J. Tucillo and L. Umscheid and and D. Williamson},
1726   year           = 1989,   year           = 1989,
1727   title          = {Rules for Interchange of Physical Parameterizations.},   title          = {Rules for Interchange of Physical Parameterizations.},
1728   journal        = bams,   journal        = bams,
1729   volume         = {70},   volume         = {70},
1730   pages          = {620-622}   pages          = {620-622}
1731                    }                    }
1732    
1733  @Article{wo:98,  @Article{wo:98,
1734   author         = {D. Williamson and J.G. Olsen},   author         = {D. Williamson and J.G. Olsen},
1735   year           = 1998,   year           = 1998,
1736   title          = {A Comparison of Semi-Langrangian and Eulerian Polar Climate Simulations.},   title          = {A Comparison of Semi-Langrangian and Eulerian Polar Climate Simulations.},
1737   journal        = mwr,   journal        = mwr,
1738   volume         = {126},   volume         = {126},
1739   pages          = {991-1000}   pages          = {991-1000}
1740                    }                    }
1741    
1742  @TechReport{MPI-std-20,  @TechReport{MPI-std-20,
1743    author =       {{Message Passing Interface Forum}}},    author =       {{Message Passing Interface Forum}},
1744    title =        {{MPI}: A Message-Passing Interface standard (version 2.0)},    title =        {{MPI}: A Message-Passing Interface standard (version 2.0)},
1745    institution =  {mpi-forum.org},    institution =  {mpi-forum.org},
1746    year =         {1998},    year =         {1998},
1747  }  }
1748    
1749    @Article{cam08,
1750      author =       {Jean-Michel Campin and John Marshall and David
1751                      Ferreira},
1752      title =        {Sea-Ice Ocean Coupling Using a Rescaled Vertical
1753                      Coordinate z$^\ast$},
1754      journal =      om,
1755      volume =       24,
1756      number =       {1--2},
1757      pages =        {1--14},
1758      doi =          {10.1016/j.ocemod.2008.05.005},
1759      year =         2008
1760    }
1761    
1762    @Article{geiger98,
1763      author =       {Cathleen A. Geiger and Hibler, III, William D. and
1764                      Stephen F. Ackley},
1765      title =        {Large-Scale Sea Ice Drift and Deformation:
1766                      {C}omparison between Models and Observations in the
1767                      Western {W}eddell {S}ea during 1992},
1768      journal =      jgr,
1769      year =         1998,
1770      volume =       103,
1771      number =       {C10},
1772      pages =        {21893--21913}
1773    }
1774    
1775    @InCollection{hibler84,
1776      author =       {Hibler, III, William D.},
1777      title =        {The role of sea ice dynamics in modeling CO{$_2$}
1778                      increases},
1779      booktitle =    {Climate processes and climate sensitivity},
1780      pages =        {238--253},
1781      publisher =    {AGU},
1782      year =         1984,
1783      editor =       {J. E. Hansen and T. Takahashi},
1784      volume =       29,
1785      series =       {Geophysical Monograph},
1786      address =      {Washington, D.C.}
1787    }
1788    
1789    @Article{hibler87,
1790      author =       {Hibler, III, William D. and Kirk Bryan},
1791      title =        {A Diagnostic Ice-Ocean Model},
1792      journal =      jpo,
1793      year =         1987,
1794      volume =       17,
1795      number =       7,
1796      pages =        {987--1015}
1797    }
1798    
1799    @InCollection{hibler95,
1800      author =       {Hibler, III, William D. and Chi F. Ip},
1801      title =        {The effect of sea ice rheology on {A}rcitc buoy
1802                      drift},
1803      booktitle =    {Ice Mechanics},
1804      pages =        {255--264},
1805      publisher =    {Am. Soc. of Mech. Eng.},
1806      year =         1995,
1807      editor =       {John P. Dempsey and Y. D. S. Rajapakse},
1808      volume =       204,
1809      series =       {AMD},
1810      address =      {New York}
1811    }
1812    
1813    @Article{hibler97,
1814      author =       {Hibler, III, William D. and Erland M. Schulson},
1815      title =        {On Modeling Sea-Ice Fracture and Flow in Numerical
1816                      Investigations of Climate},
1817      journal =      angl,
1818      year =         1997,
1819      volume =       25,
1820      pages =        {26--32}
1821    }
1822    
1823    @Article{hundsdorfer94,
1824      author =       {Willem Hundsdorfer and R. A. Trompert},
1825      title =        {Method of Lines and Direct Discretization: a
1826                      Comparison for Linear Advection},
1827      journal =      {Applied Numerical Mathematics},
1828      year =         1994,
1829      volume =       13,
1830      number =       6,
1831      pages =        {469--490},
1832      doi =          {10.1016/0168-9274(94)90009-4}
1833    }
1834    
1835    @Article{leppaeranta83,
1836      author =       {Matti Lepp{\"a}ranta},
1837      title =        {A Growth Model for Black Ice, Snow Ican and Snow
1838                      Thickness in Subarctic Basins},
1839      journal =      {Nordic Hydrology},
1840      year =         1983,
1841      volume =       14,
1842      pages =        {59--70}
1843    }
1844    
1845    @Article{manabe79,
1846      author =       {S. Manabe and Kirk Bryan and M. J. Spelman},
1847      title =        {A Global Ocean-Atmosphere Climate Model with Seasonal
1848                      Variation for Future Studies of Climate Sensitivity},
1849      journal =      dao,
1850      year =         1979,
1851      volume =       3,
1852      number =       {393--426}
1853    }
1854    
1855    @ARTICLE{menemenlis05,
1856      author =       {D. Menemenlis and C. Hill and A. Adcroft and
1857                      J.-M. Campin and B. Cheng and B. Ciotti and
1858                      I. Fukumori and A. Koehl and P. Heimbach and
1859                      C. Henze and T. Lee and D. Stammer and J. Taft and
1860                      J. Zhang},
1861      title =        {{NASA} Supercomputer Improves Prospects for Ocean
1862                      Climate Research},
1863      journal =      eos,
1864      year =         2005,
1865      volume =       86,
1866      number =       9,
1867      pages =        {89, 95--96}
1868    }
1869    
1870    @Article{parkinson79,
1871      author =       {{Parkinson}, Claire~L. and {Washington}, Warren~M.},
1872      title =        "{A Large-Scale Numerical Model of Sea Ice}",
1873      journal =      jgr,
1874      year =         1979,
1875      month =        jan,
1876      volume =       84,
1877      number =       {C1},
1878      pages =        {311--337},
1879      adsurl =       {http://adsabs.harvard.edu/cgi-bin/nph-bib_query?bibcode=1979JGR....84..311P&db_key=PHY},
1880      adsnote =      {Provided by the Smithsonian/NASA Astrophysics Data
1881                      System}
1882    }
1883    
1884    @Article{semtner84,
1885      author =       {Semtner, Jr., Albert J.},
1886      title =        {On Modelling the Seasonal Thermodynamic Cycle of Sea
1887                      Ice in Studies of Climatic Change},
1888      journal =      cch,
1889      year =         1984,
1890      volume =       6,
1891      number =       1,
1892      pages =        {27--37}
1893    }
1894    
1895    @Article{zhang97,
1896      author =       {Jinlun Zhang and Hibler, III, William D.},
1897      title =        {On an Efficient Numerical Method for Modeling Sea Ice Dynamics},
1898      journal =      jgr,
1899      year =         1997,
1900      volume =       102,
1901      number =       {C4},
1902      pages =        {8691--8702}
1903    }
1904    
1905    @Article{zhang03,
1906      author =       {Jinlun Zhang and Drew A. Rothrock},
1907      title =        {Modeling Global Sea Ice with a Thickness and
1908                      Enthalpy Distribution Model in Generalized
1909                      Curvilinear Coordinates},
1910      journal =      mwr,
1911      year =         2003,
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1914      pages =        {845--861}
1915    }
1916    
1917    @Article{beckmann99,
1918      author =       {Aike Beckmann and Hartmut H. Hellmer and Ralph
1919                      Timmermann},
1920      title =        {A Numerical Model of the {W}eddell {S}ea:
1921                      Large-Scale Circulation and Water Mass Distribution},
1922      journal =      jgr,
1923      year =         1999,
1924      volume =       104,
1925      number =       {C10},
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1927    }
1928    
1929    @Article{grosfeld97,
1930      author =       {Klaus Grosfeld and R{\"u}diger Gerdes and J{\"u}rgen
1931                      Determann},
1932      title =        {Thermohaline Circulation and Interaction between Ice
1933                      Shelf Cavities and the Adjacent Open Water},
1934      journal =      jgr,
1935      year =         1997,
1936      volume =       102,
1937      number =       {C7},
1938      pages =        {15,595--15,610}
1939    }
1940    
1941    @Article{hellmer89,
1942      author =       {Hartmut H. Hellmer and Dirk J. Olbers},
1943      title =        {A Two-Dimensional Model of the Thermohaline
1944                      Circulation Under an Ice Shelf},
1945      journal =      {Antarct. Sci.},
1946      year =         1989,
1947      volume =       1,
1948      pages =        {325--336}
1949    }
1950    
1951    @Article{holland99,
1952      author =       {David M. Holland and Adrian Jenkins},
1953      title =        {Modeling Thermodynamic Ice-Ocean Interactions at the
1954                      Base of an Ice Shelf},
1955      journal =      jpo,
1956      year =         1999,
1957      volume =       29,
1958      number =       8,
1959      pages =        {1787--1800}
1960    }
1961    
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1963      author =       {Adrian Jenkins and Hartmut H. Hellmer and David
1964                      M. Holland},
1965      title =        {The Role of Meltwater Advection in the Formulation
1966                      of Conservative Boundary Conditions at an Ice-Ocean
1967                      Interface},
1968      journal =      jpo,
1969      year =         2001,
1970      volume =       31,
1971      pages =        {285--296}}
1972    
1973    @Article{losch08,
1974      author =       {Martin Losch},
1975      title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean
1976                      General Circulation Model},
1977      journal =      jgr,
1978      year =         2008,
1979      volume =       113,
1980      number =       {C08043},
1981      doi =          {10.1029/2007JC004368}
1982    }
1983    
1984    @Article{Dutay02,
1985     author         = {Dutay, J.-C. and J.L. Bullister and S.C. Doney and J.C. Orr
1986        and R. Najjar and K. Caldeira and J.-M. Campin and H. Drange and M. Follows
1987        and Y. Gao and N. Gruber and M.W. Hecht and A. Ishida and F. Joos and K. Lindsay
1988        and G. Madec and E. Maier-Reimer and J.C. Marshall and R.J. Matear and P. Monfray
1989        and A. Mouchet and G.-K. Plattner and J. sarmiento and R. Schlitzer and R. Slater
1990        and I.J. Totterdell and M.-F. Weirig and Y. Yammanaka and A. Yool},
1991     year           = 2002,
1992     title          = {Evaluation of ocean model ventilation with CFC-11:
1993                       comparison of 13 global ocean models},
1994     journal        = om,
1995     volume         = {4},          number= {},             month   = {},
1996     pages          = {89-120}
1997                    }
1998    
1999    @Article{marsh06,
2000     author         = {Marshall, John and Emily Shuckburgh and Helen Jones and Chris Hill},
2001     year           = 2006,
2002     title          = {Estimates and Implications of Surface Eddy Diffusivity
2003                       in the Southern Ocean Derived from Tracer Transport},
2004     journal        = jpo,
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2006     pages          = {1806-1821}
2007                    }
2008    
2009    @InProceedings{hoe-hill:99,
2010      author =       {Hoe, James C. and Chris Hill and Alistair Adcroft},
2011      title =        {A Personal Supercomputer for Climate Research},
2012      booktitle =    {In Proceedings of the ACM/IEEE Super-Computing Confrence},
2013      year =         1999,
2014      pages = {10.1109/SC.1999},
2015      publisher =    {IEEE},
2016    }
2017    
2018    @Article{stevens:90,
2019      author =       {Stevens, D. P.},
2020      title =        {On Open Boundary Conditions for Three Dimensional
2021                      Primitive Equation Ocean Circulation Models},
2022      journal =      {Geophys. Astrophys. Fl. Dyn.},
2023      year =         1990,
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2025      pages =        {103--133}}
2026    
2027    @Article{kalnay96,
2028      author =       {E. Kalnay and M. Kanamitsu and R. Kistler and
2029                      W. Collins and D. Deaven and L. Gandin and
2030                      M. Iredell and S. Saha and G. White and J. Woollen
2031                      and Y. Zhu and M. Chelliah and W. Ebisuzaki and
2032                      W. Higgins and J. Janowiak and K. C. Mo and
2033                      C. Ropelewski and J. Wang and A. Leetmaa and
2034                      R. Reynolds and R. Jenne and D. Joseph},
2035      title =        {The {NMC/NCAR} 40-Year Reanalysis Project},
2036      journal =      bams,
2037      year =         1996,
2038      volume =       77,
2039      pages =        {437--471}
2040    }
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