| 226 | pages          = {1891--1910}, | pages          = {1891--1910}, | 
| 227 | } | } | 
| 228 |  |  | 
| 229 |  | @Article{gas-eta:90, | 
| 230 |  | author         = {P. Gaspar and Y. Gr\'egoris and J.-M. Lefevre}, | 
| 231 |  | year           = 1990, | 
| 232 |  | title          = {A Simple Eddy Kinetic Energy Model for Simulations of the | 
| 233 |  | Oceanic Vertical Mixing: Tests at Station Papa and Long-Term | 
| 234 |  | Upper Ocean Study Site}, | 
| 235 |  | journal        = jgr, | 
| 236 |  | volume         = {95 (C9)}, | 
| 237 |  | pages          = {16,179--16,193}, | 
| 238 |  | } | 
| 239 |  |  | 
| 240 | @Article{gen-mcw:90, | @Article{gen-mcw:90, | 
| 241 | author         = {P.R. Gent and J.C. McWilliams}, | author         = {P.R. Gent and J.C. McWilliams}, | 
| 242 | year           = 1990, | year           = 1990, | 
| 523 | } | } | 
| 524 |  |  | 
| 525 | @ARTICLE{losc-heim:06, | @ARTICLE{losc-heim:06, | 
| 526 | author = {M. Losch and P. Heimbach}, | author =       {Martin Losch and Patrick Heimbach}, | 
| 527 | title = {Adjoint sensitivity of an ocean general circulation model | title =        {Adjoint Sensitivity of an Ocean General Circulation | 
| 528 | to bottom topography}, | Model to Bottom Topography}, | 
| 529 | journal = jpo, | journal =      jpo, | 
| 530 | year = {2006}, | year =         2007, | 
| 531 | volume = {{in press}}, | volume =       37, | 
| 532 |  | doi =          {10.1175/JPO3017.1}, | 
| 533 |  | number =       2, | 
| 534 |  | pages =        {377--393}, | 
| 535 | url    = {http://mitgcm.org/pdfs/Los2006a.pdf}, | url    = {http://mitgcm.org/pdfs/Los2006a.pdf}, | 
| 536 | } | } | 
| 537 |  |  | 
| 593 | doi            = {10.1016/S0924-7963\%2898\%2900008-6}, | doi            = {10.1016/S0924-7963\%2898\%2900008-6}, | 
| 594 | } | } | 
| 595 |  |  | 
| 596 | @Article{mcw:96, | @Article{mol:09, | 
| 597 | author         = {J. McWilliams}, | author         = {Andrea Molod}, | 
| 598 | year           = 1996, | year           = 2009, | 
| 599 | title          = {Modeling the oceanic general circulation}, | title          = {Running {GCM} physics and dynamics on different grids: | 
| 600 | journal        = arfm, | algorithm and tests}, | 
| 601 | volume         = {28}, | journal        = tel, | 
| 602 | pages          = {215--248}, | volume         = {61A}, | 
| 603 |  | pages          = {381--393}, | 
| 604 | } | } | 
| 605 |  |  | 
| 606 | %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies | %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies | 
| 611 | %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's | %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's | 
| 612 | %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are | %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are | 
| 613 | %%   also available. | %%   also available. | 
| 614 |  |  | 
| 615 | @incollection{naum-etal:06, | @incollection{naum-etal:06, | 
| 616 | Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout}, | Author = {U. Naumann and J. Utke and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch and M. Fagan and N. Tallent and M. Strout}, | 
| 617 | Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006}, | Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006}, | 
| 621 | Title = {Adjoint code by source transformation with OpenAD/F}, | Title = {Adjoint code by source transformation with OpenAD/F}, | 
| 622 | Year = {2006}} | Year = {2006}} | 
| 623 |  |  | 
| 624 |  | @Article{orl:76, | 
| 625 |  | author         = {I. Orlanski}, | 
| 626 |  | year           = 1976, | 
| 627 |  | title          = {A simple boundary condition for unbounded hyperbolic flows}, | 
| 628 |  | journal        = jcp, | 
| 629 |  | volume         = {21}, | 
| 630 |  | pages          = {251--269}, | 
| 631 |  | } | 
| 632 |  |  | 
| 633 |  | @Article{pal-rom:97, | 
| 634 |  | author         = {T. Paluszkiewicz and R.D. Romea}, | 
| 635 |  | year           = 1997, | 
| 636 |  | title          = {A one-dimensional model for the parameterization | 
| 637 |  | of deep convection in the ocean}, | 
| 638 |  | journal        = dao, | 
| 639 |  | volume         = {26}, | 
| 640 |  | pages          = {95--130}, | 
| 641 |  | } | 
| 642 |  |  | 
| 643 | @TechReport{rew:97, | @TechReport{rew:97, | 
| 644 | author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies}, | author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies}, | 
| 645 | title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90}, | title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90}, | 
| 1324 | JOURNAL     = jpo, | JOURNAL     = jpo, | 
| 1325 | YEAR        = 1997, | YEAR        = 1997, | 
| 1326 | VOLUME      = 27, | VOLUME      = 27, | 
| 1327 | PAGES       = "1849-1867" | PAGES       = "1849--1867" | 
| 1328 |  | } | 
| 1329 |  |  | 
| 1330 |  | @Article{hun01, | 
| 1331 |  | author =       {Elizabeth C. Hunke}, | 
| 1332 |  | title =        {Viscous-Plastic Sea Ice Dynamics with the {EVP} | 
| 1333 |  | Model: Linearization Issues}, | 
| 1334 |  | journal =      jcp, | 
| 1335 |  | year =         2001, | 
| 1336 |  | volume =       170, | 
| 1337 |  | pages =        {18--38}, | 
| 1338 |  | doi =          {10.1006/jcph.2001.6710} | 
| 1339 | } | } | 
| 1340 |  |  | 
| 1341 | @ARTICLE{zha00, | @ARTICLE{zha00, | 
| 1344 | JOURNAL     = jgr, | JOURNAL     = jgr, | 
| 1345 | YEAR        = 2000, | YEAR        = 2000, | 
| 1346 | VOLUME      = 105, | VOLUME      = 105, | 
| 1347 | PAGES       = "3325-3338" | PAGES       = "3325--3338" | 
| 1348 | } | } | 
| 1349 |  |  | 
| 1350 | @Article{Shapiro_70, | @Article{Shapiro_70, | 
| 1704 | volume         = {126}, | volume         = {126}, | 
| 1705 | pages          = {991-1000} | pages          = {991-1000} | 
| 1706 | } | } | 
| 1707 |  |  | 
| 1708 | @TechReport{MPI-std-20, | @TechReport{MPI-std-20, | 
| 1709 | author =       {{Message Passing Interface Forum}}}, | author =       {{Message Passing Interface Forum}}, | 
| 1710 | title =        {{MPI}: A Message-Passing Interface standard (version 2.0)}, | title =        {{MPI}: A Message-Passing Interface standard (version 2.0)}, | 
| 1711 | institution =  {mpi-forum.org}, | institution =  {mpi-forum.org}, | 
| 1712 | year =         {1998}, | year =         {1998}, | 
| 1880 | pages =        {845--861} | pages =        {845--861} | 
| 1881 | } | } | 
| 1882 |  |  | 
| 1883 |  | @Article{beckmann99, | 
| 1884 |  | author =       {Aike Beckmann and Hartmut H. Hellmer and Ralph | 
| 1885 |  | Timmermann}, | 
| 1886 |  | title =        {A Numerical Model of the {W}eddell {S}ea: | 
| 1887 |  | Large-Scale Circulation and Water Mass Distribution}, | 
| 1888 |  | journal =      jgr, | 
| 1889 |  | year =         1999, | 
| 1890 |  | volume =       104, | 
| 1891 |  | number =       {C10}, | 
| 1892 |  | pages =        {23,375--23,392} | 
| 1893 |  | } | 
| 1894 |  |  | 
| 1895 |  | @Article{grosfeld97, | 
| 1896 |  | author =       {Klaus Grosfeld and R{\"u}diger Gerdes and J{\"u}rgen | 
| 1897 |  | Determann}, | 
| 1898 |  | title =        {Thermohaline Circulation and Interaction between Ice | 
| 1899 |  | Shelf Cavities and the Adjacent Open Water}, | 
| 1900 |  | journal =      jgr, | 
| 1901 |  | year =         1997, | 
| 1902 |  | volume =       102, | 
| 1903 |  | number =       {C7}, | 
| 1904 |  | pages =        {15,595--15,610} | 
| 1905 |  | } | 
| 1906 |  |  | 
| 1907 |  | @Article{hellmer89, | 
| 1908 |  | author =       {Hartmut H. Hellmer and Dirk J. Olbers}, | 
| 1909 |  | title =        {A Two-Dimensional Model of the Thermohaline | 
| 1910 |  | Circulation Under an Ice Shelf}, | 
| 1911 |  | journal =      {Antarct. Sci.}, | 
| 1912 |  | year =         1989, | 
| 1913 |  | volume =       1, | 
| 1914 |  | pages =        {325--336} | 
| 1915 |  | } | 
| 1916 |  |  | 
| 1917 |  | @Article{holland99, | 
| 1918 |  | author =       {David M. Holland and Adrian Jenkins}, | 
| 1919 |  | title =        {Modeling Thermodynamic Ice-Ocean Interactions at the | 
| 1920 |  | Base of an Ice Shelf}, | 
| 1921 |  | journal =      jpo, | 
| 1922 |  | year =         1999, | 
| 1923 |  | volume =       29, | 
| 1924 |  | number =       8, | 
| 1925 |  | pages =        {1787--1800} | 
| 1926 |  | } | 
| 1927 |  |  | 
| 1928 |  | @Article{jenkins01, | 
| 1929 |  | author =       {Adrian Jenkins and Hartmut H. Hellmer and David | 
| 1930 |  | M. Holland}, | 
| 1931 |  | title =        {The Role of Meltwater Advection in the Formulation | 
| 1932 |  | of Conservative Boundary Conditions at an Ice-Ocean | 
| 1933 |  | Interface}, | 
| 1934 |  | journal =      jpo, | 
| 1935 |  | year =         2001, | 
| 1936 |  | volume =       31, | 
| 1937 |  | pages =        {285--296}} | 
| 1938 |  |  | 
| 1939 |  | @Article{losch08, | 
| 1940 |  | author =       {Martin Losch}, | 
| 1941 |  | title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean | 
| 1942 |  | General Circulation Model}, | 
| 1943 |  | journal =      jgr, | 
| 1944 |  | year =         2008, | 
| 1945 |  | volume =       113, | 
| 1946 |  | number =       {C08043}, | 
| 1947 |  | doi =          {10.1029/2007JC004368} | 
| 1948 |  | } | 
| 1949 |  |  | 
| 1950 |  | @Article{Dutay02, | 
| 1951 |  | author         = {Dutay, J.-C. and J.L. Bullister and S.C. Doney and J.C. Orr | 
| 1952 |  | and R. Najjar and K. Caldeira and J.-M. Campin and H. Drange and M. Follows | 
| 1953 |  | and Y. Gao and N. Gruber and M.W. Hecht and A. Ishida and F. Joos and K. Lindsay | 
| 1954 |  | and G. Madec and E. Maier-Reimer and J.C. Marshall and R.J. Matear and P. Monfray | 
| 1955 |  | and A. Mouchet and G.-K. Plattner and J. sarmiento and R. Schlitzer and R. Slater | 
| 1956 |  | and I.J. Totterdell and M.-F. Weirig and Y. Yammanaka and A. Yool}, | 
| 1957 |  | year           = 2002, | 
| 1958 |  | title          = {Evaluation of ocean model ventilation with CFC-11: | 
| 1959 |  | comparison of 13 global ocean models}, | 
| 1960 |  | journal        = om, | 
| 1961 |  | volume         = {4},          number= {},             month   = {}, | 
| 1962 |  | pages          = {89-120} | 
| 1963 |  | } | 
| 1964 |  |  | 
| 1965 |  | @Article{marsh06, | 
| 1966 |  | author         = {Marshall, John and Emily Shuckburgh and Helen Jones and Chris Hill}, | 
| 1967 |  | year           = 2006, | 
| 1968 |  | title          = {Estimates and Implications of Surface Eddy Diffusivity | 
| 1969 |  | in the Southern Ocean Derived from Tracer Transport}, | 
| 1970 |  | journal        = jpo, | 
| 1971 |  | volume         = {36},          number= {},             month   = {}, | 
| 1972 |  | pages          = {1806-1821} | 
| 1973 |  | } | 
| 1974 |  |  | 
| 1975 |  | @InProceedings{hoe-hill:99, | 
| 1976 |  | author =       {Hoe, James C. and Chris Hill and Alistair Adcroft}, | 
| 1977 |  | title =        {A Personal Supercomputer for Climate Research}, | 
| 1978 |  | booktitle =    {In Proceedings of the ACM/IEEE Super-Computing Confrence}, | 
| 1979 |  | year =         1999, | 
| 1980 |  | pages = {10.1109/SC.1999}, | 
| 1981 |  | publisher =    {IEEE}, | 
| 1982 |  | } | 
| 1983 |  |  | 
| 1984 |  | @Article{stevens:90, | 
| 1985 |  | author =       {Stevens, D. P.}, | 
| 1986 |  | title =        {On Open Boundary Conditions for Three Dimensional | 
| 1987 |  | Primitive Equation Ocean Circulation Models}, | 
| 1988 |  | journal =      {Geophys. Astrophys. Fl. Dyn.}, | 
| 1989 |  | year =         1990, | 
| 1990 |  | volume =       51, | 
| 1991 |  | pages =        {103--133}} | 
| 1992 |  |  |