| 1 | 
 @string{arfm    = {Annu.~Rev.~Fluid Mech.}} | 
 @string{arfm    = {Annu.~Rev.~Fluid Mech.}} | 
| 2 | 
 @string{bams    = {Bull.~Am.~Met.~Soc.}} | 
 @string{bams    = {Bull.~Am.~Met.~Soc.}} | 
| 3 | 
 @string{blm     = {Bound.~Layer~Meteorol.}} | 
 @string{blm     = {Bound.~Layer~Meteorol.}} | 
| 4 | 
  | 
 @string{climd   = {Clim.~Dynamics}} | 
| 5 | 
 @string{jgr     = {J.~Geophys.~Res.}} | 
 @string{jgr     = {J.~Geophys.~Res.}} | 
| 6 | 
 @string{ijrs    = {Int.~J.~Remote Sensing}} | 
 @string{ijrs    = {Int.~J.~Remote Sensing}} | 
| 7 | 
 @string{jas     = {J.~Atmos.~Sci.}} | 
 @string{jas     = {J.~Atmos.~Sci.}} | 
| 11 | 
 @string{jfm     = {J.~Fluid Mech.}} | 
 @string{jfm     = {J.~Fluid Mech.}} | 
| 12 | 
 @string{jaot    = {J.~Atmos.~Ocean.~Technol.}} | 
 @string{jaot    = {J.~Atmos.~Ocean.~Technol.}} | 
| 13 | 
 @string{jms     = {J.~Mar.~Sys.}} | 
 @string{jms     = {J.~Mar.~Sys.}} | 
| 14 | 
  | 
 @string{om      = {Ocean Modelling}} | 
| 15 | 
 @string{gaos    = {Global Atmos.~Ocean System}} | 
 @string{gaos    = {Global Atmos.~Ocean System}} | 
| 16 | 
 @string{grl     = {Geophys.~Res.~Lett.}} | 
 @string{grl     = {Geophys.~Res.~Lett.}} | 
| 17 | 
 @string{dsr     = {Deep Sea Res.}} | 
 @string{dsr     = {Deep Sea Res.}} | 
| 252 | 
  pages          = {401 pp.}, | 
  pages          = {401 pp.}, | 
| 253 | 
                   } | 
                   } | 
| 254 | 
                                    | 
                                    | 
| 255 | 
  | 
 @incollection{gri:89, | 
| 256 | 
  | 
  author         = {A. Griewank}, | 
| 257 | 
  | 
  year           = 1989, | 
| 258 | 
  | 
  title          = {On automatic differentiation}, | 
| 259 | 
  | 
  booktitle      = {Mathematical Programming: Recent Developments and | 
| 260 | 
  | 
                   Applications}, | 
| 261 | 
  | 
  pages          = {83--108}, | 
| 262 | 
  | 
  editor         = {M. Iri and K. Tanabe}, | 
| 263 | 
  | 
  publisher      = {Kluwer}, | 
| 264 | 
  | 
  address        = {Dordrecht, NL}, | 
| 265 | 
  | 
                   } | 
| 266 | 
  | 
   | 
| 267 | 
  | 
 @Article{gri:92, | 
| 268 | 
  | 
   author =       {A.~Griewank}, | 
| 269 | 
  | 
   title =        {Achieving logarithmic growth of temporal and spatial | 
| 270 | 
  | 
   complexity in reverse {A}utomatic {D}ifferentiation}, | 
| 271 | 
  | 
   journal       = {Optimization Methods and Software}, | 
| 272 | 
  | 
   year          = {1992}, | 
| 273 | 
  | 
   volume        = {1}, | 
| 274 | 
  | 
   pages         = {35--54} | 
| 275 | 
  | 
 } | 
| 276 | 
  | 
  | 
| 277 | 
 @book{gri:00, | 
 @book{gri:00, | 
| 278 | 
  author         = {A. Griewank}, | 
  author         = {A. Griewank}, | 
| 279 | 
  title          = {Evaluating Derivatives. Principles and Techniques | 
  title          = {Evaluating Derivatives. Principles and Techniques | 
| 295 | 
  volume         = {39}, | 
  volume         = {39}, | 
| 296 | 
  pages          = {2038--3050}, | 
  pages          = {2038--3050}, | 
| 297 | 
                   } | 
                   } | 
| 298 | 
  | 
  | 
| 299 | 
  | 
 @Article{Haney, | 
| 300 | 
  | 
   author =       {R.L. Haney}, | 
| 301 | 
  | 
   title =        {Surface thermal boundary conditions for ocean | 
| 302 | 
  | 
                   circulation models}, | 
| 303 | 
  | 
   journal =      jpo, | 
| 304 | 
  | 
   year =         1971, | 
| 305 | 
  | 
   volume =       1, | 
| 306 | 
  | 
   pages =        {241--248} | 
| 307 | 
  | 
 } | 
| 308 | 
  | 
   | 
| 309 | 
  | 
 @Article{held-suar:94, | 
| 310 | 
  | 
  author         = {I.M. Held and M.J. Suarez}, | 
| 311 | 
  | 
  year           = {1994}, | 
| 312 | 
  | 
  title          = {A proposal for the intercomparison of the dynamical cores of atmospheric general circulation models}, | 
| 313 | 
  | 
  journal        = {Bulletin of the American Meteorological Society}, | 
| 314 | 
  | 
  volume         = {75(10)}, | 
| 315 | 
  | 
  pages          = {1825-1830} | 
| 316 | 
  | 
 } | 
| 317 | 
   | 
   | 
| 318 | 
 @Article{hil-eta:01, | 
 @Article{hil-eta:01, | 
| 319 | 
  author         = {C. Hill and M. Follows and V. Bugnion and  | 
  author         = {C. Hill and M. Follows and V. Bugnion and  | 
| 320 | 
                   J. Marshall}, | 
                   J. Marshall}, | 
| 321 | 
  year           = {2001}, | 
  year           = {2002}, | 
| 322 | 
  title          = {Spatial and Temporal Impacts of ocean general  | 
  title          = {Spatial and Temporal Impacts of ocean general  | 
| 323 | 
                   circulation on carbon sequestration}, | 
                   circulation on carbon sequestration}, | 
| 324 | 
  journal        = {journal ???}, | 
  journal        = {Global Biogeochemical Cycles}, | 
| 325 | 
  note           = {submitted}, | 
  note           = {submitted}, | 
| 326 | 
                   } | 
                   } | 
| 327 | 
   | 
  | 
| 328 | 
  | 
 @ARTICLE{hib80, | 
| 329 | 
  | 
   AUTHOR      = "W. D. {Hibler, III}", | 
| 330 | 
  | 
   TITLE       = "Modeling a Variable Thickness Sea Ice Cover", | 
| 331 | 
  | 
   JOURNAL     = mwr, | 
| 332 | 
  | 
   YEAR        = 1980, | 
| 333 | 
  | 
   VOLUME      = 1, | 
| 334 | 
  | 
   PAGES       = "1943-1973" | 
| 335 | 
  | 
 } | 
| 336 | 
  | 
  | 
| 337 | 
  | 
 @Article{Holland75, | 
| 338 | 
  | 
  author         = {W.R. Holland and L. B. Lin}, | 
| 339 | 
  | 
  year           = {1975a}, | 
| 340 | 
  | 
  title          = {On the origin of mesoscale eddies and their contribution  | 
| 341 | 
  | 
                    to the general circulation of the ocean. I. A preliminary  | 
| 342 | 
  | 
                    numerical experiment}, | 
| 343 | 
  | 
  journal        = jpo, | 
| 344 | 
  | 
  volume         = {5}, | 
| 345 | 
  | 
  pages          = {642-657} | 
| 346 | 
  | 
                   } | 
| 347 | 
  | 
  | 
| 348 | 
  | 
 @Article{hol-lin:75b, | 
| 349 | 
  | 
  author         = {W.R. Holland and L. B. Lin}, | 
| 350 | 
  | 
  year           = {1975b}, | 
| 351 | 
  | 
  title          = {On the origin of mesoscale eddies and their contribution  | 
| 352 | 
  | 
                    to the general circulation of the ocean. II. A parameter | 
| 353 | 
  | 
                    study}, | 
| 354 | 
  | 
  journal        = jpo, | 
| 355 | 
  | 
  volume         = {5}, | 
| 356 | 
  | 
  pages          = {658-669} | 
| 357 | 
  | 
                   } | 
| 358 | 
  | 
  | 
| 359 | 
 @book{kas-eta:00, | 
 @book{kas-eta:00, | 
| 360 | 
  author         = {P. Kasibhatla and M. Heimann and P. Rayner and | 
  author         = {P. Kasibhatla and M. Heimann and P. Rayner and | 
| 361 | 
                   N. Mahowald and R.G. Prinn and D.E. Hartley}, | 
                   N. Mahowald and R.G. Prinn and D.E. Hartley}, | 
| 400 | 
  volume         = {38A}, | 
  volume         = {38A}, | 
| 401 | 
  pages          = {97--110}, | 
  pages          = {97--110}, | 
| 402 | 
                   } | 
                   } | 
| 403 | 
  | 
  | 
| 404 | 
  | 
 @TechReport{lev:94a, | 
| 405 | 
  | 
   author =       {S. Levitus and T.P.Boyer}, | 
| 406 | 
  | 
   title =        {{World Ocean Atlas 1994 Volume 3: Salinity}}, | 
| 407 | 
  | 
   institution =  {NOAA Atlas NESDIS 3}, | 
| 408 | 
  | 
   year =         1994, | 
| 409 | 
  | 
   OPTkey =       {}, | 
| 410 | 
  | 
   OPTtype =      {}, | 
| 411 | 
  | 
   OPTnumber =    {}, | 
| 412 | 
  | 
   OPTaddress =   {U.S. Department of Commerce, Washington D.C.}, | 
| 413 | 
  | 
   OPTmonth =     {}, | 
| 414 | 
  | 
   OPTnote =      {}, | 
| 415 | 
  | 
   OPTannote =    {} | 
| 416 | 
  | 
 } | 
| 417 | 
  | 
  | 
| 418 | 
  | 
  | 
| 419 | 
  | 
 @TechReport{Levitus94, | 
| 420 | 
  | 
   author =       {S. Levitus and T.P.Boyer}, | 
| 421 | 
  | 
   title =        {{World Ocean Atlas 1994 Volume 4: Temperature}}, | 
| 422 | 
  | 
   institution =  {NOAA Atlas NESDIS 4}, | 
| 423 | 
  | 
   year =         1994, | 
| 424 | 
  | 
   OPTkey =       {}, | 
| 425 | 
  | 
   OPTtype =      {}, | 
| 426 | 
  | 
   OPTnumber =    {}, | 
| 427 | 
  | 
   OPTaddress =   {U.S. Department of Commerce, Washington D.C.}, | 
| 428 | 
  | 
   OPTmonth =     {}, | 
| 429 | 
  | 
   OPTnote =      {}, | 
| 430 | 
  | 
   OPTannote =    {} | 
| 431 | 
  | 
 } | 
| 432 | 
  | 
  | 
| 433 | 
   | 
   | 
| 434 | 
 @Article{lew-der:85, | 
 @Article{lew-der:85, | 
| 435 | 
  author         = {J. Lewis and J. Derber}, | 
  author         = {J. Lewis and J. Derber}, | 
| 516 | 
  volume         = {28}, | 
  volume         = {28}, | 
| 517 | 
  pages          = {215--248}, | 
  pages          = {215--248}, | 
| 518 | 
                   } | 
                   } | 
| 519 | 
   | 
  | 
| 520 | 
  | 
 %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies | 
| 521 | 
  | 
 %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997. | 
| 522 | 
  | 
 %% (Available from Unidata or in PostScript form by anonymous FTP from  | 
| 523 | 
  | 
 %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also  | 
| 524 | 
  | 
 %%   a hypertext version of the User's Guide available at  | 
| 525 | 
  | 
 %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's  | 
| 526 | 
  | 
 %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are  | 
| 527 | 
  | 
 %%   also available. | 
| 528 | 
  | 
  | 
| 529 | 
  | 
 @TechReport{rew:97, | 
| 530 | 
  | 
   author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies}, | 
| 531 | 
  | 
   title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},  | 
| 532 | 
  | 
                   An Interface for Data Access, Version 3}, | 
| 533 | 
  | 
   institution =  {Unidata Program Center}, | 
| 534 | 
  | 
   type =         {Report}, | 
| 535 | 
  | 
   address =      {Boulder, Colorado}, | 
| 536 | 
  | 
   year =         1997, | 
| 537 | 
  | 
   note =         {http://www.unidata.ucar.edu/packages/netcdf/}, | 
| 538 | 
  | 
 } | 
| 539 | 
  | 
  | 
| 540 | 
  | 
  | 
| 541 | 
 @Article{res-eta:98, | 
 @Article{res-eta:98, | 
| 542 | 
  author         = {J.M. Restrepo and G.K. Leaf and A. Griewank}, | 
  author         = {J.M. Restrepo and G.K. Leaf and A. Griewank}, | 
| 543 | 
  year           = 1998, | 
  year           = 1998, | 
| 544 | 
  title          = {Circumvening storage limitations in variational | 
  title          = {Circumventing storage limitations in variational | 
| 545 | 
                   data assimilation studies}, | 
                   data assimilation studies}, | 
| 546 | 
  journal        = {SIAM J. Sci. Comput.}, | 
  journal        = {SIAM J. Sci. Comput.}, | 
| 547 | 
  volume         = {19}, | 
  volume         = {19}, | 
| 571 | 
  publisher      = {Springer-Verlag}, | 
  publisher      = {Springer-Verlag}, | 
| 572 | 
  address        = {Berlin (Germany)}, | 
  address        = {Berlin (Germany)}, | 
| 573 | 
                   } | 
                   } | 
| 574 | 
  | 
  | 
| 575 | 
  | 
 @Article{DaSilva94, | 
| 576 | 
  | 
  author         = {A. da Silva and A. C. Young and S. Levitus}, | 
| 577 | 
  | 
  year           = 1994, | 
| 578 | 
  | 
  title          = {Atlas of Surface Marine Data 1994, Volume 1: Algorithms and Procedures}, | 
| 579 | 
  | 
  journal        = {NOAA Atlas NESDIS}, | 
| 580 | 
  | 
  volume         = {6}, | 
| 581 | 
  | 
  publisher      = {U.S. Department of Commerce}, | 
| 582 | 
  | 
  address        = {Washington, D.C. (USA)}, | 
| 583 | 
  | 
  note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/}, | 
| 584 | 
  | 
                   } | 
| 585 | 
   | 
   | 
| 586 | 
 @techreport{sta-eta:97, | 
 @techreport{sta-eta:97, | 
| 587 | 
  author         = {D. Stammer and C. Wunsch and R. Giering and | 
  author         = {D. Stammer and C. Wunsch and R. Giering and | 
| 588 | 
                   Q. Zhang and J. Marotzke an J. Marshall and | 
                   Q. Zhang and J. Marotzke and J. Marshall and | 
| 589 | 
                   C. Hill}, | 
                   C. Hill}, | 
| 590 | 
  year           = 1997, | 
  year           = 1997, | 
| 591 | 
  title          = {The global ocean circulation estimated from  | 
  title          = {The global ocean circulation estimated from  | 
| 608 | 
                   estimated from ocean observations and a general | 
                   estimated from ocean observations and a general | 
| 609 | 
                   circulation model}, | 
                   circulation model}, | 
| 610 | 
  journal        = jgr, | 
  journal        = jgr, | 
| 611 | 
  note           = {submitted}, | 
  note           = {in press}, | 
| 612 | 
  | 
                   } | 
| 613 | 
  | 
  | 
| 614 | 
  | 
 @Article{Stommel66, | 
| 615 | 
  | 
  author         = {H. Stommel}, | 
| 616 | 
  | 
  year           = 1948, | 
| 617 | 
  | 
  title          = {The western intensification of wind-driven ocean currents}, | 
| 618 | 
  | 
  journal        = {Trans. Am. Geophys. Union}, | 
| 619 | 
  | 
  volume         = {29}, | 
| 620 | 
  | 
  pages          = {206}, | 
| 621 | 
                   } | 
                   } | 
| 622 | 
  | 
  | 
| 623 | 
 @Article{tal-cou:87, | 
 @Article{tal-cou:87, | 
| 779 | 
 } | 
 } | 
| 780 | 
  | 
  | 
| 781 | 
 @Article{marshall:97b, | 
 @Article{marshall:97b, | 
| 782 | 
   author =       {Marshall, J., A. Adcroft, C. Hill, L. Perelman, and C. Heise}, | 
   author =       {Marshall, J. and A. Adcroft and C. Hill and L. Perelman and C. Heisey}, | 
| 783 | 
   title =        {A finite-volume, incompressible Navier Stokes model for | 
   title =        {A finite-volume, incompressible Navier Stokes model for | 
| 784 | 
                   studies of the ocean on parallel computers}, | 
                   studies of the ocean on parallel computers}, | 
| 785 | 
   journal =      {JGR}, | 
   journal =      {JGR}, | 
| 799 | 
   pages =        {2293-2315} | 
   pages =        {2293-2315} | 
| 800 | 
 } | 
 } | 
| 801 | 
  | 
  | 
| 802 | 
  | 
 @Article{adcroft:04a, | 
| 803 | 
  | 
   author =       {Adcroft, A. and J.-M. Campin}, | 
| 804 | 
  | 
   title =        {Re-scaled height coordinates for accurate representation | 
| 805 | 
  | 
                   of free-surface flows in ocean circulation models}, | 
| 806 | 
  | 
   journal =      om, | 
| 807 | 
  | 
   year =         2004, | 
| 808 | 
  | 
   volume =       7, | 
| 809 | 
  | 
   pages =        {269-284} | 
| 810 | 
  | 
 } | 
| 811 | 
  | 
  | 
| 812 | 
  | 
 @Article{adcroft:04b, | 
| 813 | 
  | 
   author =       {Adcroft, A. and J.-M. Campin and C. Hill and J. Marshall}, | 
| 814 | 
  | 
   title =        {Implementation of an Atmosphere-Ocean General Circulation Model | 
| 815 | 
  | 
                   on the Expanded Spherical Cube}, | 
| 816 | 
  | 
   journal =      mwr, | 
| 817 | 
  | 
   year =         2004, | 
| 818 | 
  | 
   volume =       132, | 
| 819 | 
  | 
   pages =        {2845-2863} | 
| 820 | 
  | 
 } | 
| 821 | 
  | 
  | 
| 822 | 
  | 
 @Article{marshall:04, | 
| 823 | 
  | 
   author =       {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White}, | 
| 824 | 
  | 
   title =        {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms}, | 
| 825 | 
  | 
   journal =      mwr, | 
| 826 | 
  | 
   year =         2004, | 
| 827 | 
  | 
   volume =       132, | 
| 828 | 
  | 
   pages =        {2882-2894} | 
| 829 | 
  | 
 } | 
| 830 | 
  | 
  | 
| 831 | 
 @Article{visbeck:97, | 
 @Article{visbeck:97, | 
| 832 | 
   author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall}, | 
   author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall}, | 
| 833 | 
   title =        {Specification of eddy transfer coefficients in | 
   title =        {Specification of eddy transfer coefficients in | 
| 853 | 
 } | 
 } | 
| 854 | 
  | 
  | 
| 855 | 
 @Article{marshall:98, | 
 @Article{marshall:98, | 
| 856 | 
   author =       {Marshall, J., Jones, H. and C. Hill}, | 
   author =       {J. Marshall and H. Jones and C. Hill}, | 
| 857 | 
   title =        {Efficient ocean modeling using non-hydrostatic algorithms}, | 
   title =        {Efficient ocean modeling using non-hydrostatic algorithms}, | 
| 858 | 
   journal =      {JMR}, | 
   journal =      {JMR}, | 
| 859 | 
   year =         1998, | 
   year =         1998, | 
| 894 | 
 @InProceedings{hill:99, | 
 @InProceedings{hill:99, | 
| 895 | 
   author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall}, | 
   author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall}, | 
| 896 | 
   title =        {A Strategy for Terascale Climate Modeling}, | 
   title =        {A Strategy for Terascale Climate Modeling}, | 
| 897 | 
   booktitle =    {In Proceedings of the Eight ECMWF Workshop on the Use of Parallel Processors in Meteorology}, | 
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