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revision 1.1 by heimbach, Thu Oct 4 19:27:24 2001 UTC revision 1.11 by heimbach, Wed Apr 24 11:01:46 2002 UTC
# Line 250  Line 250 
250   pages          = {401 pp.},   pages          = {401 pp.},
251                    }                    }
252                                                                        
253    @incollection{gri:89,
254     author         = {A. Griewank},
255     year           = 1989,
256     title          = {On automatic differentiation},
257     booktitle      = {Mathematical Programming: Recent Developments and
258                      Applications},
259     pages          = {83--108},
260     editor         = {M. Iri and K. Tanabe},
261     publisher      = {Kluwer},
262     address        = {Dordrecht, NL},
263                      }
264    
265    @Article{gri:92,
266      author =       {A.~Griewank},
267      title =        {Achieving logarithmic growth of temporal and spatial
268      complexity in reverse {A}utomatic {D}ifferentiation},
269      journal       = {Optimization Methods and Software},
270      year          = {1992},
271      volume        = {1},
272      pages         = {35--54}
273    }
274    
275  @book{gri:00,  @book{gri:00,
276   author         = {A. Griewank},   author         = {A. Griewank},
277   title          = {Evaluating Derivatives. Principles and Techniques   title          = {Evaluating Derivatives. Principles and Techniques
# Line 271  Line 293 
293   volume         = {39},   volume         = {39},
294   pages          = {2038--3050},   pages          = {2038--3050},
295                    }                    }
296    
297    @Article{Haney,
298      author =       {R.L. Haney},
299      title =        {Surface thermal boundary conditions for ocean
300                      circulation models},
301      journal =      jpo,
302      year =         1971,
303      volume =       1,
304      pages =        {241--248}
305    }
306    
307  @Article{hil-eta:01,  @Article{hil-eta:01,
308   author         = {C. Hill and M. Follows and V. Bugnion and   author         = {C. Hill and M. Follows and V. Bugnion and
309                    J. Marshall},                    J. Marshall},
310   year           = {2001},   year           = {2002},
311   title          = {Spatial and Temporal Impacts of ocean general   title          = {Spatial and Temporal Impacts of ocean general
312                    circulation on carbon sequestration},                    circulation on carbon sequestration},
313   journal        = {journal ???},   journal        = {Global Biogeochemical Cycles},
314   note           = {submitted},   note           = {submitted},
315                    }                    }
316    
317    @Article{Holland75,
318     author         = {W.R. Holland and L. B. Lin},
319     year           = {1975a},
320     title          = {On the origin of mesoscale eddies and their contribution
321                       to the general circulation of the ocean. I. A preliminary
322                       numerical experiment},
323     journal        = jpo,
324     volume         = {5},
325     pages          = {642-657}
326                      }
327    
328    @Article{hol-lin:75b,
329     author         = {W.R. Holland and L. B. Lin},
330     year           = {1975b},
331     title          = {On the origin of mesoscale eddies and their contribution
332                       to the general circulation of the ocean. II. A parameter
333                       study},
334     journal        = jpo,
335     volume         = {5},
336     pages          = {658-669}
337                      }
338    
339  @book{kas-eta:00,  @book{kas-eta:00,
340   author         = {P. Kasibhatla and M. Heimann and P. Rayner and   author         = {P. Kasibhatla and M. Heimann and P. Rayner and
341                    N. Mahowald and R.G. Prinn and D.E. Hartley},                    N. Mahowald and R.G. Prinn and D.E. Hartley},
# Line 326  Line 380 
380   volume         = {38A},   volume         = {38A},
381   pages          = {97--110},   pages          = {97--110},
382                    }                    }
383    
384    @TechReport{lev:94a,
385      author =       {S. Levitus and T.P.Boyer},
386      title =        {{World Ocean Atlas 1994 Volume 3: Salinity}},
387      institution =  {NOAA Atlas NESDIS 3},
388      year =         1994,
389      OPTkey =       {},
390      OPTtype =      {},
391      OPTnumber =    {},
392      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
393      OPTmonth =     {},
394      OPTnote =      {},
395      OPTannote =    {}
396    }
397    
398    
399    @TechReport{Levitus94,
400      author =       {S. Levitus and T.P.Boyer},
401      title =        {{World Ocean Atlas 1994 Volume 4: Temperature}},
402      institution =  {NOAA Atlas NESDIS 4},
403      year =         1994,
404      OPTkey =       {},
405      OPTtype =      {},
406      OPTnumber =    {},
407      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
408      OPTmonth =     {},
409      OPTnote =      {},
410      OPTannote =    {}
411    }
412    
413    
414  @Article{lew-der:85,  @Article{lew-der:85,
415   author         = {J. Lewis and J. Derber},   author         = {J. Lewis and J. Derber},
# Line 416  Line 500 
500  @Article{res-eta:98,  @Article{res-eta:98,
501   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},
502   year           = 1998,   year           = 1998,
503   title          = {Circumvening storage limitations in variational   title          = {Circumventing storage limitations in variational
504                    data assimilation studies},                    data assimilation studies},
505   journal        = {SIAM J. Sci. Comput.},   journal        = {SIAM J. Sci. Comput.},
506   volume         = {19},   volume         = {19},
# Line 446  Line 530 
530   publisher      = {Springer-Verlag},   publisher      = {Springer-Verlag},
531   address        = {Berlin (Germany)},   address        = {Berlin (Germany)},
532                    }                    }
533    
534    @Article{DaSilva94,
535     author         = {A. da Silva and A. C. Young and S. Levitus},
536     year           = 1994,
537     title          = {Atlas of Surface Marine Data 1994, Volume 1: Algorithms and Procedures},
538     journal        = {NOAA Atlas NESDIS},
539     volume         = {6},
540     publisher      = {U.S. Department of Commerce},
541     address        = {Washington, D.C. (USA)},
542     note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
543                      }
544    
545  @techreport{sta-eta:97,  @techreport{sta-eta:97,
546   author         = {D. Stammer and C. Wunsch and R. Giering and   author         = {D. Stammer and C. Wunsch and R. Giering and
547                    Q. Zhang and J. Marotzke an J. Marshall and                    Q. Zhang and J. Marotzke and J. Marshall and
548                    C. Hill},                    C. Hill},
549   year           = 1997,   year           = 1997,
550   title          = {The global ocean circulation estimated from   title          = {The global ocean circulation estimated from
# Line 472  Line 567 
567                    estimated from ocean observations and a general                    estimated from ocean observations and a general
568                    circulation model},                    circulation model},
569   journal        = jgr,   journal        = jgr,
570   note           = {submitted},   note           = {in press},
571                      }
572    
573    @Article{Stommel66,
574     author         = {H. Stommel},
575     year           = 1948,
576     title          = {The western intensification of wind-driven ocean currents},
577     journal        = {Trans. Am. Geophys. Union},
578     volume         = {29},
579     pages          = {206},
580                    }                    }
581    
582  @Article{tal-cou:87,  @Article{tal-cou:87,
# Line 606  Line 710 
710   volume         = {57},   volume         = {57},
711   pages          = {305--334},   pages          = {305--334},
712                    }                    }
713    
714    
715    @InCollection{hill:95,
716      author =       {Hill, C. and J. Marshall},
717      title =        {Application of a Parallel Navier-Stokes Model to
718                      Ocean Circulation in Parallel Computational Fluid
719                      Dynamics},
720      booktitle =    {Implementations and Results Using Parallel
721                      Computers},
722      pages =        {545-552},
723      publisher =    {Elsevier Science B.V.: New York},
724      year =         1995,
725      editor =       {A. Ecer, J. Periaux, N. Satofuka and S. Taylor}
726    }
727    
728    
729    @Article{marshall:97a,
730      author =       {Marshall, J. and C. Hill and L. Perelman and A. Adcroft},
731      title =        {Hydrostatic, quasi-hydrostatic, and nonhydrostatic ocean
732                     modeling},
733      journal =      {JGR},
734      year =         1997,
735      volume =       102,
736      number =       {C3},
737      pages =        {5733-5752}
738    }
739    
740    @Article{marshall:97b,
741      author =       {Marshall, J. and A. Adcroft and C. Hill and L. Perelman and C. Heisey},
742      title =        {A finite-volume, incompressible Navier Stokes model for
743                      studies of the ocean on parallel computers},
744      journal =      {JGR},
745      year =         1997,
746      volume =       102,
747      number =       {C3},
748      pages =        {5753-5766}
749    }
750    
751    @Article{adcroft:97,
752      author =       {Adcroft, A.J. and Hill, C.N. and J. Marshall},
753      title =        {Representation of topography by shaved cells in a height
754                      coordinate ocean model},
755      journal =      {MWR},
756      year =         1997,
757      volume =       125,
758      pages =        {2293-2315}
759    }
760    
761    @Article{visbeck:97,
762      author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall},
763      title =        {Specification of eddy transfer coefficients in
764                      coarse-resolution ocean circulation models},
765      journal =      {JPO},
766      year =         1997,
767      volume =       27,
768      number =       3,
769      pages =        {381-402}
770    }
771    
772    @Article{shaw:98,
773      author =       {Shaw; A. Arvind, Cho, K.-C., Hill, C., Johnson, R.P.
774                      and Marshall, J.},
775      title =        {A comparison of implicitly parallel multi-threaded and
776                      data-parallel implementations of an ocean model based
777                      on the Navier-Stokes equations},
778      journal =      {J. of Parallel and Distributed Computing},
779      year =         1998,
780      volume =       48,
781      number =       1,
782      pages =        {1-51}
783    }
784    
785    @Article{marshall:98,
786      author =       {J. Marshall and H. Jones and C. Hill},
787      title =        {Efficient ocean modeling using non-hydrostatic algorithms},
788      journal =      {JMR},
789      year =         1998,
790      volume =       18,
791      pages =        {115-134}
792    }
793    
794    @Article{mjn:99,
795      author =       {Marshall, J., Jamous, D and J. Nilsson},
796      title =        {Reconciling `thermodynamic' and `dynamic' methods of
797                      computation of water-mass transformation rates},
798      journal =      {DSR},
799      year =         1999,
800      volume =       46,
801      pages =        {545-572}
802    }
803    
804    @Article{ms:99,
805      author =       {Marshall, J and F. Schott},
806      title =        {Open ocean deep convection: observations, models and theory},
807      journal =      {Rev. Geophys.},
808      year =         1999,
809      volume =       37,
810      number =       1,
811      pages =        {1-64}
812    }
813    
814    @Article{adcroft:99,
815      author =       {Adcroft, A., Hill C. and J. Marshall},
816      title =        {A new treatment of the Coriolis terms in C-grid models
817                      at both high and low resolutions},
818      journal =      {MWR},
819      year =         1999,
820      volume =       127,
821      pages =        {1928-1936}
822    }
823    
824    @InProceedings{hill:99,
825      author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall},
826      title =        {A Strategy for Terascale Climate Modeling},
827      booktitle =    {In Proceedings of the Eighth ECMWF Workshop on the Use of Parallel Processors in Meteorology},
828      year =         1999,
829      pages = {406-425},
830      publisher =    {World Scientific},
831    }
832    
833    @Article{wardle:00,
834      author =       {Wardle R. and Marshall J.},
835      title =        {Representation of eddies in primitive equation models by a PV flux},
836      journal =      {JPO},
837      year =         2000,
838      volume =       30,
839      number =       10,
840      pages =        {2481-2503}
841    }
842    
843    @Article{ac:02,
844      author =       {Adcroft, A. and J.-M. Campin},
845      title =        {Comparison of finite volume schemes and direct-space-time
846                      methods for ocean circulation models},
847      journal =      {OM},
848      year =         2002,
849      note =         {in preparation}
850    }
851    
852    @Article{adcroft:02,
853      author =       {Adcroft et al.},
854      title =        {Energy conversion in discrete numerical models},
855      journal =      {OM},
856      year =         2002,
857      note =         {in preparation}
858    }
859    
860    @InCollection{arakawa:77,
861      author =       {Arakawa, A. and Lamb, V.},
862      title =        {Computational Design of the Basic Dynamical Processes of
863                      the UCLA General Circulation Model},
864      booktitle =    {Methods in Computational Physics},
865      pages =        {174-267},
866      publisher =    {Academic Press},
867      year =         1977,
868      volume =       17
869    }
870    
871    @Article{adcroft:98,
872      author =       {Adcroft, A. and Marshall, D.},
873      title =        {How slippery are piecewise-constant coastlines in numerical
874                      ocean models?},
875      journal =      {Tellus},
876      year =         1998,
877      volume =       50,
878      number =       1,
879      pages =        {95-108}
880    }
881    
882    @PhdThesis{adcroft:95,
883      author =       {Adcroft, A.},
884      title =        {Numerical Algorithms for use in a Dynamical Model of the
885                      Ocean},
886      school =       {Imperial College, London},
887      year =         1995
888    }
889    
890    @Article{griffies:00,
891      author =       {Griffies, S.,M. and Hallberg, R.,W.},
892      title =        {Biharmonic friction with a Smagorinsky-like viscosity for
893                      use in large-scale eddy-permitting ocean models},
894      journal =      {MWR},
895      year =         2000,
896      volume =       128,
897      number =       8,
898      pages =        {2935-2946}
899    }
900    
901    @Article{wajsowicz:93,
902      author =       {Wajsowicz, R.},
903      title =        {A CONSISTENT FORMULATION OF THE ANISOTROPIC STRESS TENSOR
904                      FOR USE IN MODELS OF THE LARGE-SCALE OCEAN CIRCULATION},
905      journal =      {JCP},
906      year =         1993,
907      volume =       105,
908      number =       2,
909      pages =        {333-338}
910    }
911    
912    @Article{campin:02,
913      author =       {Campin et al.},
914      title =        {Conservation of properties in a free-surface model},
915      journal =      {OM},
916      year =         2002,
917      note =         {in preparation}
918    }
919    
920    @Article{dm:95,
921      author =       {Danabasoglu, G. and McWilliams J.C.},
922      title =        {Sensitivity of the global ocean circulation to parameterizations of mesoscale tracer transports},
923      journal =      {JC},
924      year =         1995,
925      volume =       8,
926      number =       12,
927      pages =        {2967-2987}
928    }
929    
930    @Article{ldd:97,
931      author =       {Large, W.G. and Danabasoglu, G. and Doney, S.C. and McWilliams, J.C.},
932      title =        {Sensitivity to surface forcing and boundary layer mixing in a global ocean model: Annual-mean climatology},
933      journal =      {JPO},
934      year =         1997,
935      volume =       27,
936      number =       11,
937      pages =        {2418-2447}
938    }
939    
940    @Article{gkw:99,
941      author =       {Gerdes R. and Koberle C. and Beckmann A. and Herrmann P. and Willebrand J.},
942      title =        {Mechanisms for spreading of Mediterranean water in
943                      coarse-resolution numerical models},
944      journal =      {JPO},
945      year =         1999,
946      volume =       29,
947      number =       8,
948      pages =        {1682-1700}
949    }
950    
951    @Article{roe:85,
952      author =       {Roe, P.L.},
953      title =        {Some contributions to the modeling of discontinuous flows},
954      journal =      {Lect. Notes Appl. Math.},
955      year =         1985,
956      volume =       22,
957      pages =        {163-193}
958    }
959    
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