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# Line 4  Line 4 
4  @string{blm     = {Bound.~Layer~Meteorol.}}  @string{blm     = {Bound.~Layer~Meteorol.}}
5  @string{climd   = {Clim.~Dynamics}}  @string{climd   = {Clim.~Dynamics}}
6  @string{cch     = {Clim.\ Change}}  @string{cch     = {Clim.\ Change}}
7  @string{jgr     = {J.~Geophys.~Res.}}  @string{cup     = {Cambridge University Press}}
8  @string{ijrs    = {Int.~J.~Remote Sensing}}  @string{dao     = {Dyn.~Atmos.~Oceans}}
9  @string{jas     = {J.~Atmos.~Sci.}}  @string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}}
10    @string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}}
11    @string{dsr     = {Deep Sea Res.}}
12    @string{ecmwf   = {ECMWF}}
13    @string{eos     = {Eos~Trans.\ AGU}}
14    @string{esa     = {European Space Agency (ESA)}}
15    @string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}}
16    @string{estec   = {European Space Research and Technology Centre (ESTEC)}}
17    @string{gaos    = {Global Atmos.~Ocean System}}
18    @string{grl     = {Geophys.~Res.~Lett.}}
19    @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}
20    @string{ifremer = {IFREMER/CERSAT}}
21    @string{igarss  = {IEEE Press, Piscataway, N.J., USA}}
22  @string{jam     = {J.~Appl.~Meteor.}}  @string{jam     = {J.~Appl.~Meteor.}}
23  @string{jpo     = {J.~Phys.~Oceanogr.}}  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}
24    @string{jas     = {J.~Atmos.~Sci.}}
25  @string{jclim   = {J.~Clim.}}  @string{jclim   = {J.~Clim.}}
26  @string{jcp     = {J.~Comput.~Phys.}}  @string{jcp     = {J.~Comput.~Phys.}}
 @string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}  
27  @string{jfm     = {J.~Fluid Mech.}}  @string{jfm     = {J.~Fluid Mech.}}
28  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}  @string{jgr     = {J.~Geophys.~Res.}}
29    @string{ijrs    = {Int.~J.~Remote Sensing}}
30  @string{jms     = {J.~Mar.~Sys.}}  @string{jms     = {J.~Mar.~Sys.}}
31  @string{om      = {Ocean Modelling}}  @string{jpo     = {J.~Phys.~Oceanogr.}}
32  @string{gaos    = {Global Atmos.~Ocean System}}  @string{mpi     = {MPI f\"ur Meteorologie}}
 @string{grl     = {Geophys.~Res.~Lett.}}  
 @string{dsr     = {Deep Sea Res.}}  
 @string{dao     = {Dyn.~Atmos.~Oceans}}  
33  @string{mwr     = {Mon.~Wea.~Rev.}}  @string{mwr     = {Mon.~Wea.~Rev.}}
34    @string{om      = {Ocean Modelling}}
35    @string{ptrsl   = {{Phil.~Trans.~R.~Soc.~Lond.}}}
36  @string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}}  @string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}}
37    @string{siscicom= {SIAM J.\ Sci.\ Comput.}}
38  @string{tel     = {Tellus}}  @string{tel     = {Tellus}}
 @string{cup     = {Cambridge University Press}}  
 @string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}}  
 @string{ifremer = {IFREMER/CERSAT}}  
 @string{igarss  = {IEEE Press, Piscataway, N.J., USA}}  
 @string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}}  
 @string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}}  
 @string{mpi     = {MPI f\"ur Meteorologie}}  
 @string{ecmwf   = {ECMWF}}  
 @string{estec   = {European Space Research and Technology Centre  
                         (ESTEC)}}  
 @string{esa     = {European Space Agency (ESA)}}  
 @string{eos     = {Eos~Trans.\ AGU}}  
39    
40  @Article{bis-eta:92,  @Article{bis-eta:92,
41   author         = {C.H. Bishof and G.F. Corliss and L. Green and   author         = {C.H. Bishof and G.F. Corliss and L. Green and
# Line 694  Line 695 
695                    }                    }
696    
697  @article{utke-etal:08,  @article{utke-etal:08,
698          Author = {J. Utke and U. Naumann and M. Fagan and N. Tallent and M. Strout and P. Heimbach and C. Hill and D. Ozyurt and C. Wunsch},    Author =       {J. Utke and U. Naumann and M. Fagan and N. Tallent
699          Date-Modified = {2007-11-19 10:15:08 -0500},                    and M. Strout and P. Heimbach and C. Hill and
700          Journal = {{ACM} Transactions on Mathematical Software},                    D. Ozyurt and C. Wunsch},
701          Pages = {~},    Date-Modified ={2007-11-19 10:15:08 -0500},
702          Title = {OpenAD/F: A modular open source tool for automatic differentiation of Fortran codes},    Journal =      {{ACM} Transactions on Mathematical Software},
703          Volume = {34(4)},    Pages =        {~},
704          Year = {2008}}    Title =        {OpenAD/F: A modular open source tool for automatic
705                      differentiation of Fortran codes},
706      Volume =       {34(4)},
707      Year =         2008
708    }
709    
710  @Article{DaSilva94,  @Article{DaSilva94,
711   author         = {A. da Silva and A. C. Young and S. Levitus},   author         = {A. da Silva and A. C. Young and S. Levitus},
# Line 730  Line 735 
735   address        = {Cambridge (MA), USA},   address        = {Cambridge (MA), USA},
736                    }                    }
737    
738  @ARTICLE{stam-etal:02,  @article{stam-etal:02,
739    author = {D. Stammer and C. Wunsch and R. Giering and C. Eckert and P. Heimbach and J. Marotzke and A. Adcroft and C.N. Hill and J. Marshall},    author =       {D. Stammer and C. Wunsch and R. Giering and
740    title = {The global ocean circulation and transports during 1992 -- 1997, estimated from ocean observations and a general circulation model.},                    C. Eckert and P. Heimbach and J. Marotzke and
741    journal = jgr,                    A. Adcroft and C.N. Hill and J. Marshall},
742    year = {2002a},    title =        {The global ocean circulation and transports during
743    volume = {107(C9)},                    1992 -- 1997, estimated from ocean observations and
744    pages = {3118},                    a general circulation model.},
745    doi   = {10.1029/2001JC000888},    journal =      jgr,
746      year =         {2002a},
747      volume =       {107(C9)},
748      pages =        {3118},
749      doi =          {10.1029/2001JC000888},
750  }  }
751    
752    
# Line 1852  atmospheric boundary layer.}, Line 1861  atmospheric boundary layer.},
1861    number =       {393--426}    number =       {393--426}
1862  }  }
1863    
1864  @ARTICLE{menemenlis05,  @Article{menemenlis05,
1865    author =       {D. Menemenlis and C. Hill and A. Adcroft and    author =       {D. Menemenlis and C. Hill and A. Adcroft and
1866                    J.-M. Campin and B. Cheng and B. Ciotti and                    J.-M. Campin and B. Cheng and B. Ciotti and
1867                    I. Fukumori and A. Koehl and P. Heimbach and                    I. Fukumori and A. Koehl and P. Heimbach and
# Line 1970  atmospheric boundary layer.}, Line 1979  atmospheric boundary layer.},
1979    volume =       31,    volume =       31,
1980    pages =        {285--296}}    pages =        {285--296}}
1981    
1982    @Article{kalnay96,
1983      author =       {E. Kalnay and M. Kanamitsu and R. Kistler and
1984                      W. Collins and D. Deaven and L. Gandin and
1985                      M. Iredell and S. Saha and G. White and J. Woollen
1986                      and Y. Zhu and M. Chelliah and W. Ebisuzaki and
1987                      W. Higgins and J. Janowiak and K. C. Mo and
1988                      C. Ropelewski and J. Wang and A. Leetmaa and
1989                      R. Reynolds and R. Jenne and D. Joseph},
1990      title =        {The {NMC/NCAR} 40-Year Reanalysis Project},
1991      journal =      bams,
1992      year =         1996,
1993      volume =       77,
1994      pages =        {437--471}
1995    }
1996    
1997    @Article{klymaklegg10,
1998      author =       {Klymak, Jody M. and Sonya M. Legg},
1999      title =        {A simple mixing scheme for models that resolve
2000                      breaking internal waves},
2001      journal =      om,
2002      year =         2010,
2003      volume =       33,
2004      pages =        {224--234},
2005      doi =          {10.1016/j.ocemod.2010.02.005}
2006    }
2007    
2008  @Article{losch08,  @Article{losch08,
2009    author =       {Martin Losch},    author =       {Martin Losch},
2010    title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean    title =        {Modeling Ice Shelf Cavities in a z-Coordinate Ocean
# Line 1981  atmospheric boundary layer.}, Line 2016  atmospheric boundary layer.},
2016    doi =          {10.1029/2007JC004368}    doi =          {10.1029/2007JC004368}
2017  }  }
2018    
2019    @Article{losch10:_mitsim,
2020      author =       {Losch, Martin and Menemenlis, Dimitris and Campin,
2021                      Jean-Michel and Heimbach, Patrick and Hill, Chris},
2022      title =        {On the formulation of sea-ice models. {P}art 1:
2023                      Effects of different solver implementations and
2024                      parameterizations},
2025      journal =      om,
2026      year =         2010,
2027      volume =       33,
2028      number =       {1--2},
2029      pages =        {129--144},
2030      doi =          {10.1016/j.ocemod.2009.12.008}
2031    }
2032    
2033    @Article{losch14:_jfnk,
2034      author =       {Martin Losch and Annika Fuchs and
2035                      Jean-Fran{\c{c}}ois Lemieux and Anna Vanselow},
2036      title =        {A Parallel {J}Acobian-Free {N}ewton-{K}rylov Solver
2037                      for a Coupled Sea Ice-Ocean Model },
2038      journal =      jcp,
2039      volume =       {257},
2040      number =       {A},
2041      pages =        {901--910},
2042      year =         {2014},
2043      doi =          {10.1016/j.jcp.2013.09.026}
2044    }
2045    
2046    @Article{lemieux09,
2047      author =       {Jean-Fran{\c{c}}ois Lemieux and Bruno Tremblay},
2048      title =        {Numerical Convergence of Viscous-Plastic Sea Ice
2049                      Models},
2050      journal =      jgr,
2051      year =         2009,
2052      volume =       114,
2053      number =       {C05009},
2054      doi =          {10.1029/2008JC005017}}
2055    
2056    @Article{lemieux10,
2057      author =       {Jean-Fran{\c{c}}ois Lemieux and Bruno Tremblay and Jan
2058                      Sedl{\'a}{\v{c}}ek and Paul Tupper and Stephen
2059                      Thomas and David Huard and Jean-Pierre Auclair},
2060      title =        {Improving the Numerical Convergence of
2061                      Viscous-Plastic Sea Ice Models with the
2062                      {J}acobian-Free {N}ewton-{K}rylov Method},
2063      journal =      jcp,
2064      year =         2010,
2065      volume =       229,
2066      pages =        {2840--2852},
2067      doi =          {10.1016/j.jcp.2009.12.011c}}
2068    
2069    @article{knoll04:_jfnk,
2070      Author =       {D.A. Knoll and D.E. Keyes},
2071      Title =        {{J}acobian-free {N}ewton-{K}rylov Methods: a Survey
2072                      of Approaches and Applications},
2073      Journal =      jcp,
2074      Year =         2004,
2075      Volume =       193,
2076      Pages =        {357--397},
2077      doi =          {10.1016/j.jcp.2003.08.010},
2078    }
2079    
2080    @Article{saad93:_fgmres,
2081      author =       {Y. Saad},
2082      title =        {A Flexible Inner-Outer Preconditioned {GMRES}
2083                      Method},
2084      journal =      siscicom,
2085      year =         1993,
2086      volume =       14,
2087      number =       2,
2088      pages =        {461--469}}
2089    
2090  @Article{Dutay02,  @Article{Dutay02,
2091   author         = {Dutay, J.-C. and J.L. Bullister and S.C. Doney and J.C. Orr   author         = {Dutay, J.-C. and J.L. Bullister and S.C. Doney and J.C. Orr
2092      and R. Najjar and K. Caldeira and J.-M. Campin and H. Drange and M. Follows      and R. Najjar and K. Caldeira and J.-M. Campin and H. Drange and M. Follows
# Line 2022  atmospheric boundary layer.}, Line 2128  atmospheric boundary layer.},
2128    journal =      {Geophys. Astrophys. Fl. Dyn.},    journal =      {Geophys. Astrophys. Fl. Dyn.},
2129    year =         1990,    year =         1990,
2130    volume =       51,    volume =       51,
2131    pages =        {103--133}}    pages =        {103--133}
2132    }
2133    
2134  @Article{kalnay96,  
2135    author =       {E. Kalnay and M. Kanamitsu and R. Kistler and  @Article{moum96,
2136                    W. Collins and D. Deaven and L. Gandin and    author        = {Moum, J.N.},
2137                    M. Iredell and S. Saha and G. White and J. Woollen    title         = {Energy-containing scales of turbulence in the ocean thermocline},
2138                    and Y. Zhu and M. Chelliah and W. Ebisuzaki and    journal       = jgr,
2139                    W. Higgins and J. Janowiak and K. C. Mo and    year          = 1996,
2140                    C. Ropelewski and J. Wang and A. Leetmaa and    volume        = {101 (C3)},
2141                    R. Reynolds and R. Jenne and D. Joseph},    pages         = {14095--14109}
2142    title =        {The {NMC/NCAR} 40-Year Reanalysis Project},  }
2143    journal =      bams,  
2144    year =         1996,  @Article{seimgregg94,
2145    volume =       77,    author        = {Seim, Harvey E. and Michael C. Gregg},
2146    pages =        {437--471}    title         = {Detailed observations of a naturally occurring shear instability},
2147      journal       = jgr,
2148      year          = 1994,
2149      volume        = {99 (C5)},
2150      pages         = {10049--10073},
2151    }
2152    
2153    @Article{thorpe77,
2154      author        = {Thorpe, S.A.},
2155      title         = {Turbulence and mixing in a Scottish loch},
2156      journal       = ptrsl,
2157      year          = 1977,
2158      volume        = {286},
2159      pages         = {125--181}
2160    }
2161    
2162    @Article{wesson94,
2163      author        = {Wesson, J. C. and  Michael C. Gregg},
2164      title         = {Mixing at Camarinal Sill in the Strait of Gibraltar},
2165      journal       = jgr,
2166      year          = 1994,
2167      volume        = {99 (C5)},
2168      pages         = { 9847--9878}
2169  }  }
2170    
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