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revision 1.5 by cnh, Tue Nov 13 20:23:27 2001 UTC revision 1.20 by edhill, Mon Aug 1 23:46:25 2005 UTC
# Line 1  Line 1 
1  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}  @string{arfm    = {Annu.~Rev.~Fluid Mech.}}
2  @string{bams    = {Bull.~Am.~Met.~Soc.}}  @string{bams    = {Bull.~Am.~Met.~Soc.}}
3  @string{blm     = {Bound.~Layer~Meteorol.}}  @string{blm     = {Bound.~Layer~Meteorol.}}
4    @string{climd   = {Clim.~Dynamics}}
5  @string{jgr     = {J.~Geophys.~Res.}}  @string{jgr     = {J.~Geophys.~Res.}}
6  @string{ijrs    = {Int.~J.~Remote Sensing}}  @string{ijrs    = {Int.~J.~Remote Sensing}}
7  @string{jas     = {J.~Atmos.~Sci.}}  @string{jas     = {J.~Atmos.~Sci.}}
# Line 10  Line 11 
11  @string{jfm     = {J.~Fluid Mech.}}  @string{jfm     = {J.~Fluid Mech.}}
12  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}  @string{jaot    = {J.~Atmos.~Ocean.~Technol.}}
13  @string{jms     = {J.~Mar.~Sys.}}  @string{jms     = {J.~Mar.~Sys.}}
14    @string{om      = {Ocean Modelling}}
15  @string{gaos    = {Global Atmos.~Ocean System}}  @string{gaos    = {Global Atmos.~Ocean System}}
16  @string{grl     = {Geophys.~Res.~Lett.}}  @string{grl     = {Geophys.~Res.~Lett.}}
17  @string{dsr     = {Deep Sea Res.}}  @string{dsr     = {Deep Sea Res.}}
# Line 250  Line 252 
252   pages          = {401 pp.},   pages          = {401 pp.},
253                    }                    }
254                                                                        
255    @incollection{gri:89,
256     author         = {A. Griewank},
257     year           = 1989,
258     title          = {On automatic differentiation},
259     booktitle      = {Mathematical Programming: Recent Developments and
260                      Applications},
261     pages          = {83--108},
262     editor         = {M. Iri and K. Tanabe},
263     publisher      = {Kluwer},
264     address        = {Dordrecht, NL},
265                      }
266    
267    @Article{gri:92,
268      author =       {A.~Griewank},
269      title =        {Achieving logarithmic growth of temporal and spatial
270      complexity in reverse {A}utomatic {D}ifferentiation},
271      journal       = {Optimization Methods and Software},
272      year          = {1992},
273      volume        = {1},
274      pages         = {35--54}
275    }
276    
277  @book{gri:00,  @book{gri:00,
278   author         = {A. Griewank},   author         = {A. Griewank},
279   title          = {Evaluating Derivatives. Principles and Techniques   title          = {Evaluating Derivatives. Principles and Techniques
# Line 271  Line 295 
295   volume         = {39},   volume         = {39},
296   pages          = {2038--3050},   pages          = {2038--3050},
297                    }                    }
298    
299    @Article{Haney,
300      author =       {R.L. Haney},
301      title =        {Surface thermal boundary conditions for ocean
302                      circulation models},
303      journal =      jpo,
304      year =         1971,
305      volume =       1,
306      pages =        {241--248}
307    }
308    
309    @Article{held-suar:94,
310     author         = {I.M. Held and M.J. Suarez},
311     year           = {1994},
312     title          = {A proposal for the intercomparison of the dynamical cores of atmospheric general circulation models},
313     journal        = {Bulletin of the American Meteorological Society},
314     volume         = {75(10)},
315     pages          = {1825-1830}
316    }
317    
318  @Article{hil-eta:01,  @Article{hil-eta:01,
319   author         = {C. Hill and M. Follows and V. Bugnion and   author         = {C. Hill and M. Follows and V. Bugnion and
320                    J. Marshall},                    J. Marshall},
321   year           = {2001},   year           = {2002},
322   title          = {Spatial and Temporal Impacts of ocean general   title          = {Spatial and Temporal Impacts of ocean general
323                    circulation on carbon sequestration},                    circulation on carbon sequestration},
324   journal        = {journal ???},   journal        = {Global Biogeochemical Cycles},
325   note           = {submitted},   note           = {submitted},
326                    }                    }
327    
328    @ARTICLE{hib80,
329      AUTHOR      = "W. D. {Hibler, III}",
330      TITLE       = "Modeling a Variable Thickness Sea Ice Cover",
331      JOURNAL     = mwr,
332      YEAR        = 1980,
333      VOLUME      = 1,
334      PAGES       = "1943-1973"
335    }
336    
337    @Article{Holland75,
338     author         = {W.R. Holland and L. B. Lin},
339     year           = {1975a},
340     title          = {On the origin of mesoscale eddies and their contribution
341                       to the general circulation of the ocean. I. A preliminary
342                       numerical experiment},
343     journal        = jpo,
344     volume         = {5},
345     pages          = {642-657}
346                      }
347    
348    @Article{hol-lin:75b,
349     author         = {W.R. Holland and L. B. Lin},
350     year           = {1975b},
351     title          = {On the origin of mesoscale eddies and their contribution
352                       to the general circulation of the ocean. II. A parameter
353                       study},
354     journal        = jpo,
355     volume         = {5},
356     pages          = {658-669}
357                      }
358    
359  @book{kas-eta:00,  @book{kas-eta:00,
360   author         = {P. Kasibhatla and M. Heimann and P. Rayner and   author         = {P. Kasibhatla and M. Heimann and P. Rayner and
361                    N. Mahowald and R.G. Prinn and D.E. Hartley},                    N. Mahowald and R.G. Prinn and D.E. Hartley},
# Line 326  Line 400 
400   volume         = {38A},   volume         = {38A},
401   pages          = {97--110},   pages          = {97--110},
402                    }                    }
403    
404    @TechReport{lev:94a,
405      author =       {S. Levitus and T.P.Boyer},
406      title =        {{World Ocean Atlas 1994 Volume 3: Salinity}},
407      institution =  {NOAA Atlas NESDIS 3},
408      year =         1994,
409      OPTkey =       {},
410      OPTtype =      {},
411      OPTnumber =    {},
412      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
413      OPTmonth =     {},
414      OPTnote =      {},
415      OPTannote =    {}
416    }
417    
418    
419    @TechReport{Levitus94,
420      author =       {S. Levitus and T.P.Boyer},
421      title =        {{World Ocean Atlas 1994 Volume 4: Temperature}},
422      institution =  {NOAA Atlas NESDIS 4},
423      year =         1994,
424      OPTkey =       {},
425      OPTtype =      {},
426      OPTnumber =    {},
427      OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
428      OPTmonth =     {},
429      OPTnote =      {},
430      OPTannote =    {}
431    }
432    
433    
434  @Article{lew-der:85,  @Article{lew-der:85,
435   author         = {J. Lewis and J. Derber},   author         = {J. Lewis and J. Derber},
# Line 412  Line 516 
516   volume         = {28},   volume         = {28},
517   pages          = {215--248},   pages          = {215--248},
518                    }                    }
519    
520    %% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
521    %% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.
522    %% (Available from Unidata or in PostScript form by anonymous FTP from
523    %%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also
524    %%   a hypertext version of the User's Guide available at
525    %%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's
526    %%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are
527    %%   also available.
528    
529    @TechReport{rew:97,
530      author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
531      title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},
532                      An Interface for Data Access, Version 3},
533      institution =  {Unidata Program Center},
534      type =         {Report},
535      address =      {Boulder, Colorado},
536      year =         1997,
537      note =         {http://www.unidata.ucar.edu/packages/netcdf/},
538    }
539    
540    
541  @Article{res-eta:98,  @Article{res-eta:98,
542   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},   author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},
543   year           = 1998,   year           = 1998,
# Line 446  Line 571 
571   publisher      = {Springer-Verlag},   publisher      = {Springer-Verlag},
572   address        = {Berlin (Germany)},   address        = {Berlin (Germany)},
573                    }                    }
574    
575    @Article{DaSilva94,
576     author         = {A. da Silva and A. C. Young and S. Levitus},
577     year           = 1994,
578     title          = {Atlas of Surface Marine Data 1994, Volume 1: Algorithms and Procedures},
579     journal        = {NOAA Atlas NESDIS},
580     volume         = {6},
581     publisher      = {U.S. Department of Commerce},
582     address        = {Washington, D.C. (USA)},
583     note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
584                      }
585    
586  @techreport{sta-eta:97,  @techreport{sta-eta:97,
587   author         = {D. Stammer and C. Wunsch and R. Giering and   author         = {D. Stammer and C. Wunsch and R. Giering and
588                    Q. Zhang and J. Marotzke an J. Marshall and                    Q. Zhang and J. Marotzke and J. Marshall and
589                    C. Hill},                    C. Hill},
590   year           = 1997,   year           = 1997,
591   title          = {The global ocean circulation estimated from   title          = {The global ocean circulation estimated from
# Line 472  Line 608 
608                    estimated from ocean observations and a general                    estimated from ocean observations and a general
609                    circulation model},                    circulation model},
610   journal        = jgr,   journal        = jgr,
611   note           = {submitted},   note           = {in press},
612                      }
613    
614    @Article{Stommel66,
615     author         = {H. Stommel},
616     year           = 1948,
617     title          = {The western intensification of wind-driven ocean currents},
618     journal        = {Trans. Am. Geophys. Union},
619     volume         = {29},
620     pages          = {206},
621                    }                    }
622    
623  @Article{tal-cou:87,  @Article{tal-cou:87,
# Line 634  Line 779 
779  }  }
780    
781  @Article{marshall:97b,  @Article{marshall:97b,
782    author =       {Marshall, J., A. Adcroft, C. Hill, L. Perelman, and C. Heise},    author =       {Marshall, J. and A. Adcroft and C. Hill and L. Perelman and C. Heisey},
783    title =        {A finite-volume, incompressible Navier Stokes model for    title =        {A finite-volume, incompressible Navier Stokes model for
784                    studies of the ocean on parallel computers},                    studies of the ocean on parallel computers},
785    journal =      {JGR},    journal =      {JGR},
# Line 654  Line 799 
799    pages =        {2293-2315}    pages =        {2293-2315}
800  }  }
801    
802    @Article{adcroft:04a,
803      author =       {Adcroft, A. and J.-M. Campin},
804      title =        {Re-scaled height coordinates for accurate representation
805                      of free-surface flows in ocean circulation models},
806      journal =      om,
807      year =         2004,
808      volume =       7,
809      pages =        {269-284}
810    }
811    
812    @Article{adcroft:04b,
813      author =       {Adcroft, A. and J.-M. Campin and C. Hill and J. Marshall},
814      title =        {Implementation of an Atmosphere-Ocean General Circulation Model
815                      on the Expanded Spherical Cube},
816      journal =      mwr,
817      year =         2004,
818      volume =       132,
819      pages =        {2845-2863}
820    }
821    
822    @Article{marshall:04,
823      author =       {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White},
824      title =        {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms},
825      journal =      mwr,
826      year =         2004,
827      volume =       132,
828      pages =        {2882-2894}
829    }
830    
831  @Article{visbeck:97,  @Article{visbeck:97,
832    author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall},    author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall},
833    title =        {Specification of eddy transfer coefficients in    title =        {Specification of eddy transfer coefficients in
# Line 679  Line 853 
853  }  }
854    
855  @Article{marshall:98,  @Article{marshall:98,
856    author =       {Marshall, J., Jones, H. and C. Hill},    author =       {J. Marshall and H. Jones and C. Hill},
857    title =        {Efficient ocean modeling using non-hydrostatic algorithms},    title =        {Efficient ocean modeling using non-hydrostatic algorithms},
858    journal =      {JMR},    journal =      {JMR},
859    year =         1998,    year =         1998,
# Line 720  Line 894 
894  @InProceedings{hill:99,  @InProceedings{hill:99,
895    author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall},    author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall},
896    title =        {A Strategy for Terascale Climate Modeling},    title =        {A Strategy for Terascale Climate Modeling},
897    booktitle =    {In Proceedings of the Eight ECMWF Workshop on the Use of Parallel Processors in Meteorology},    booktitle =    {In Proceedings of the Eighth ECMWF Workshop on the Use of Parallel Processors in Meteorology},
898    year =         1999    year =         1999,
899      pages = {406-425},
900      publisher =    {World Scientific},
901  }  }
902    
903  @Article{wardle:00,  @Article{wardle:00,
# Line 738  Line 914 
914    author =       {Adcroft, A. and J.-M. Campin},    author =       {Adcroft, A. and J.-M. Campin},
915    title =        {Comparison of finite volume schemes and direct-space-time    title =        {Comparison of finite volume schemes and direct-space-time
916                    methods for ocean circulation models},                    methods for ocean circulation models},
917    journal =      {OM},    journal =      om,
918    year =         2002,    year =         2002,
919    note =         {in preparation}    note =         {in preparation}
920  }  }
# Line 746  Line 922 
922  @Article{adcroft:02,  @Article{adcroft:02,
923    author =       {Adcroft et al.},    author =       {Adcroft et al.},
924    title =        {Energy conversion in discrete numerical models},    title =        {Energy conversion in discrete numerical models},
925    journal =      {OM},    journal =      om,
926    year =         2002,    year =         2002,
927    note =         {in preparation}    note =         {in preparation}
928  }  }
# Line 804  Line 980 
980  }  }
981    
982  @Article{campin:02,  @Article{campin:02,
983    author =       {Campin et al.},    author =       {Campin, J.-M. and A. Adcroft and C. Hill and J. Marshall},
984    title =        {Conservation of properties in a free-surface model},    title =        {Conservation of properties in a free-surface model},
985    journal =      {OM},    journal =      om,
986    year =         2002,    year =         2004,
987    note =         {in preparation}    volume =       6,
988      pages =        {221-244}
989  }  }
990    
991  @Article{dm:95,  @Article{dm:95,
# Line 842  Line 1019 
1019    pages =        {1682-1700}    pages =        {1682-1700}
1020  }  }
1021    
1022  @Article{roe:85,  @incollection{roe:85,
1023    author =       {Roe, P.L.},   author         = {P.L. Roe},
1024    title =        {Some contributions to the modeling of discontinuous flows},   year           = 1985,
1025    journal =      {Lect. Notes Appl. Math.},   title          = {Some contributions to the modelling of discontinuous flows},
1026    year =         1985,   booktitle      = {Large-Scale Computations in Fluid Mechanics},
1027    volume =       22,   series         = {Lectures in Applied Mathematics},
1028    pages =        {163-193}   volume         = 22,
1029     pages          = {163-193},
1030     editor         = {B.E. Engquist and S. Osher and R.C.J. Somerville},
1031     publisher      = {American Mathematical Society},
1032     address        = {Providence, RI},
1033    }
1034    
1035    @Article{trenberth90,
1036      author =       {K. M. Trenberth and J. Olson and W. G. Large},
1037      title =        {The Mean Annual Cycle in {G}lobal {O}cean Wind
1038                      Stress},
1039      journal =      jpo,
1040      year =         1990,
1041      volume =       20,
1042      pages =        {1742--1760}
1043    }
1044    
1045    @Article{molteni:03,
1046      author =       {K. M. Trenberth and J. Olson and W. G. Large},
1047      title =        {Atmospheric simulations using a GCM with simplified physical
1048                      parametrization, I model climatology and variability in
1049                      multidecadal experiments},
1050      journal =      climd,
1051      year =         2003,
1052      volume =       20,
1053      pages =        {175--191}
1054    }
1055    
1056    @Article{jiang99,
1057      author =       {Shi Jiang and Peter H. Stone and Paola
1058                      Malanotte-Rizzoli},
1059      title =        {An Assessment of the {G}eophysical {F}luid
1060                      {D}ynamics {L}aboratory Ocean Model with Coarse
1061                      Resolution: Annual-Mean Climatology},
1062      journal =      jgr,
1063      year =         1999,
1064      volume =       104,
1065      number =       {C11},
1066      pages =        {25,623--25,645}
1067    }
1068    
1069    @Article{szoeke02,
1070      author =       {de Szoeke, Roland A. and Roger M. Samelson},
1071      title =        {The Duality between the {B}oussinesq and
1072                      {N}on-{B}oussinesq Hydrostatic Equations of Motion},
1073      journal =      jpo,
1074      year =         2002,
1075      volume =       32,
1076      number =       8,
1077      pages =        {2194--2203}
1078    }
1079    
1080    @Article{jackett95,
1081      author =       {David R. Jackett and Trevor J. McDougall},
1082      title =        {Minimal Adjustment of Hydrographic Profiles to
1083                      Achieve Static Stability},
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1085      year =         1995,
1086      volume =       12,
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1088      pages =        {381--389}
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1091    @Article{mcdougall03,
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1093                      G. Wright and Rainer Feistel},
1094      title =        {Accurate and Computationally Efficient Algorithms
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1096      journal =      jaot,
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1101      OPTpages =     {},
1102      OPTmonth =     {},
1103      OPTnote =      {{\textup{In press}}},
1104      OPTannote =    {}
1105    }
1106    
1107    @TechReport{fofonoff83,
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1109      title =        "Algorithms for Computation of Fundamental Properties
1110                      of Seawater",
1111      institution =  "Unesco",
1112      year =         1983,
1113      type =         "Unesco Technical Papers in Marine Science",
1114      number =       44,
1115      pages =        {53 pp.}
1116    }
1117    
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1122      JOURNAL     = jpo,
1123      YEAR        = 1998,
1124      VOLUME      = 28,
1125      PAGES       = "191-217"
1126    }
1127    
1128    @ARTICLE{sem76,
1129      AUTHOR      = "Semtner, Jr., Albert J.",
1130      TITLE       = "A model for the thermodynamic growth of sea ice in
1131                     numerical investigations of climate",
1132      JOURNAL     = jpo,
1133      YEAR        = 1976,
1134      VOLUME      = 6,
1135      PAGES       = "379-389"
1136    }
1137    
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1139      AUTHOR      = "M. Winton",
1140      TITLE       = "A reformulated three-layer sea ice model",
1141      JOURNAL     = jaot,
1142      YEAR        = 2000,
1143      VOLUME      = 17,
1144      PAGES       = "525-531"
1145    }
1146    
1147    @ARTICLE{hib79,
1148      AUTHOR      = "W. D. {Hibler, III}",
1149      TITLE       = "A Dynamic Thermodynamic Sea Ice Model",
1150      JOURNAL     = jpo,
1151      YEAR        = 1979,
1152      VOLUME      = 9,
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1155    
1156    @ARTICLE{fla92,
1157      AUTHOR      = "G. M. Flato and W. D. {Hibler, III}",
1158      TITLE       = "Modeling pack ice as a cavitating fluid",
1159      JOURNAL     = jpo,
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1161      VOLUME      = 22,
1162      PAGES       = "626-651"
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1164    
1165    @ARTICLE{hun97,
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1167      TITLE       = "An elastic-viscous-plastic model for sea ice dynamics",
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1171      PAGES       = "1849-1867"
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1176      TITLE       = "Modeling Arctic Sea Ice with an Efficient Plastic Solution",
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1179      VOLUME      = 105,
1180      PAGES       = "3325-3338"
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1189      number =       {2},
1190      pages =        {359--387},
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1193    @TechReport{Dutkiewicz_etal_05,
1194      author =       {S. Dutkiewicz and A. Sokolov and J. Scott and P. Stone},
1195      title =        {A Three-Dimensional Ocean-Seaice-Carbon Cycle Model and
1196                      its Coupling to a Two-Dimensional Atmospheric Model: Uses
1197                      in Climate Change Studies, Report 122},
1198      institution =  {MIT Joint Program of the Science and Policy of Global Change},
1199      year =         {2005},
1200      OPTnumber =    {122},
1201      address =      {Cambridge, MA},
1202      note =         {http://web.mit.edu/globalchange/www/MITJPSPGC\_Rpt122.pdf},
1203    }
1204    
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1207      title =        {A Compact and Accurate Carbonate Chemistry Solver for Ocean
1208                      Biogeochemistry Models},
1209      journal =      {Ocean Modeling},
1210      year =         {{in press}},
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1212      OPTvolume =    {},
1213      OPTnumber =    {},
1214      OPTpages =     {},
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1216    
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1218      author =       {G. McKinley and M. J. Follows and J. C. Marshall},
1219      title =        {Mechanisms of air-sea CO$_2$ flux variability in the
1220                      Equatorial Pacific and the North Atlantic},
1221      journal =      {Global Biogeochemical Cycles},
1222      year =         {},
1223      OPTkey =       {},
1224      volume =       {18},
1225      number =       {doi:10.1029/2003GB002179},
1226      OPTpages =     {},
1227    }
1228    
1229    @TechReport{Trenberth_etal_89,
1230      author =       {K. Trenberth and J. Olson and W. Large},
1231      title =        {A global wind stress climatology based on ECMWF analyses},
1232      institution =  {NCAR},
1233      year =         {1989},
1234      OPTkey =       {},
1235      OPTtype =      {},
1236      number =       {NCAR/TN-338+STR},
1237      address =      {Boulder, CO},
1238      OPTmonth =     {},
1239    }
1240    
1241    @Article{Wanninkhof_92,
1242      author =       {R. Wanninkhof},
1243      title =        {Relationship between wind speed and gas exchange over the ocean},
1244      journal =      jgr,
1245      year =         {1992},
1246      OPTkey =       {},
1247      volume =       {97},
1248      OPTnumber =    {},
1249      pages =        {7373--7382},
1250      OPTmonth =     {},
1251  }  }
1252    
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