MITgcm/manual/manual_references.bib

@string{arfm    = {Annu.~Rev.~Fluid Mech.}}
@string{bams    = {Bull.~Am.~Met.~Soc.}}
@string{blm     = {Bound.~Layer~Meteorol.}}
@string{climd   = {Clim.~Dynamics}}
@string{jgr     = {J.~Geophys.~Res.}}
@string{ijrs    = {Int.~J.~Remote Sensing}}
@string{jas     = {J.~Atmos.~Sci.}}
@string{jam     = {J.~Appl.~Meteor.}}
@string{jpo     = {J.~Phys.~Oceanogr.}}
@string{jclim   = {J.~Clim.}}
@string{jcp     = {J.~Comput.~Phys.}}
@string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}}
@string{jfm     = {J.~Fluid Mech.}}
@string{jaot    = {J.~Atmos.~Ocean.~Technol.}}
@string{jms     = {J.~Mar.~Sys.}}
@string{om      = {Ocean Modelling}}
@string{gaos    = {Global Atmos.~Ocean System}}
@string{grl     = {Geophys.~Res.~Lett.}}
@string{dsr     = {Deep Sea Res.}}
@string{dao     = {Dyn.~Atmos.~Oceans}}
@string{mwr     = {Mon.~Wea.~Rev.}}
@string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}}
@string{tel     = {Tellus}}
@string{cup     = {Cambridge University Press}}
@string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}}
@string{ifremer = {IFREMER/CERSAT}}
@string{igarss  = {IEEE Press, Piscataway, N.J., USA}}
@string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}}
@string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}}
@string{mpi     = {MPI f\"ur Meteorologie}}
@string{ecmwf   = {ECMWF}}
@string{estec   = {European Space Research and Technology Centre
                        (ESTEC)}}
@string{esa     = {European Space Agency (ESA)}}

@Article{bis-eta:92,
 author         = {C.H. Bishof and G.F. Corliss and L. Green and
                   A. Griewank and K. Haigler and P. Newman},
 year           = 1992,
 title          = {Automatic differentiation of advanced GFD codes
                  for multidisciplinary design},
 journal        = {Journal on Computing Systems in Engineering},
 volume         = {3},
 pages          = {625--638},
                  }
 
@incollection{bis:94,
 author         = {C.H. Bishof},
 year           = 1994,
 title          = {Automatic differentiation, tangent linear models
                  and pseudo-adjoints},
 booktitle      = {High Performance Computing in the Geosciences},
 series         = {Series C: Mathematical and Physical Sciences},
 pages          = {59--80},
 editor         = {F.X. {Le Dimet}},
 publisher      = {Kluwer},
 address        = {Dordrecht, NL},
                  }
 
@techreport{bis-eta:94,
 author         = {C. Bishof and A. Carle and P. Khademi and
                  A. Maurer},
 year           = 1994,
 title          = {The ADIFOR 2.0 system for the automatic
                  differentiation of FORTRAN 77 programs},
 institution    = {Argonne National Laboratory, Mathematics and
                  Computer Science Division},
 type           = {Argonne Preprint},
 number         = {ANL-MCS-P981-1194},
 address        = {ANL; 9700 South Cass Ave.; 
                  Argonne (ILL), 90439; USA},
 note           = {http://www.mcs.anl.gov/autodiff/},
                  }
 
@techreport{bis-roh:97,
 author         = {C. Bishof and L. Roh},
 year           = 1997,
 title          = {ADIC: An extensible automatic differentiation tool
                  for ANSI-C},
 institution    = {Argonne National Laboratory, Mathematics and
                  Computer Science Division},
 type           = {Argonne Preprint},
 number         = {ANL-MCS-P626-1196},
 address        = {ANL; 9700 South Cass Ave.; 
                  Argonne (ILL), 90439; USA},
 note           = {http://www.mcs.anl.gov/autodiff/},
                  }
 
@Article{cou-tal:87,
 author         = {P. Courtier and O. Talagrand},
 year           = 1987,
 title          = {Variational assimilation of meteorological 
                  observations with the adjoint vorticity equation.
                  II: Numerical results},
 journal        = qjrms,
 volume         = {113},
 pages          = {1329--1347},
                  }
 
@Article{cou-tal:90,
 author         = {P. Courtier and O. Talagrand},
 year           = 1990,
 title          = {Variational assimilation of meteorological
                  observations with direct and adjoint shallow-water
                  equations},
 journal        = tel,
 volume         = {42A},
 pages          = {531--549},
                  }
 
@Article{cou-eta:94,
 author         = {P. Courtier and J.-N. Th{\'e}paut and
                  A. Hollingsworth},
 year           = 1994,
 title          = {A strategy for operational implementation of
                  4-D-VAR using an incremental approach},
 journal        = qjrms,
 volume         = {120},
 pages          = {1367--1387},
                  }
 
@Article{err:97,
 author         = {R.M. Errico},
 year           = 1997,
 title          = {What is an adjoint model},
 journal        = bams,
 volume         = {78},
 pages          = {2577--2591},
                  }
 
@Article{far-moo:92,
 author         = {B.F. Farrell and A.M. Moore},
 year           = {1992},
 title          = {An adjoint method for obtaining the most rapidly
                  growing perturbation to oceanic flows},
 journal        = jpo,
 volume         = {22},
 pages          = {338--349},
                  }
 
@Article{far-ioa:96a,
 author         = {B.F. Farrell and P. Ioannou},
 year           = {1996a},
 title          = {Generalized stability theory. Part I:
                  Autonomous operators},
 journal        = jas,
 volume         = {53},
 pages          = {2025--2040},
                  }
 
@Article{far-ioa:96b,
 author         = {B.F. Farrell and P. Ioannou},
 year           = {1996b},
 title          = {Generalized stability theory. Part I:
                  Nonautonomous operators},
 journal        = jas,
 volume         = {53},
 pages          = {2041--2053},
                  }
 
@techreport{fau-pap:98,
 author         = {C. Faure and Y. Papegay},
 year           = 1998,
 title          = {Odyss{\'e}e User's Guide. Version 1.7},
 institution    = {Institut National de Recherche en Informatique
                  et en Automatique},
 type           = {Rapport Technique},
 number         = {0224},
 address        = {INRIA; 2004, route des Luciolis, B.P. 93;
                  06902 Sophia Antipolis Cedex; France},
 note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html},
                  }
 
@Article{fau:00,
 author         = {C. Faure},
 year           = {2000},
 title          = {Adjoining strategies for multi-layered programs},
 journal        = {Optimisation Methods and Software},
 note           = {in press},
                  }
 
@Article{gen-mcw:90,
 author         = {P.R. Gent and J.C. McWilliams},
 year           = 1990,
 title          = {Isopycnal mixing in ocean circulation models},
 journal        = jpo,
 volume         = {20},
 pages          = {150--155},
                  }
 
@Article{gen-eta:95,
 author         = {P.R. Gent and J. Willebrand and T.J. McDougall
                  and J.C. McWilliams},
 year           = 1995,
 title          = {Parameterizing eddy-induced tracer transports in 
                  ocean circulation models},
 journal        = jpo,
 volume         = {25},
 pages          = {463--474},
                  }
 
@Article{gie-kam:98,
 author         = {R. Giering and T. Kaminski},
 year           = 1998,
 title          = {Recipes for adjoint code construction},
 journal        = {ACM Transactions on Mathematical Software},
 volume         = 24,
 pages          = {437--474},
                  }

@techreport{gie:99,
 author         = {R. Giering},
 year           = 1999,
 title          = {Tangent linear and Adjoint Model Compiler. 
                  Users manual 1.4 (TAMC Version 5.2)},
 institution    = {Massachusetts Institute of Technology},
 type           = {Report},
 number         = {~},
 address        = {MIT/EAPS; 77 Massachusetts Ave.; Cambridge (MA)
                  02139; USA},
 note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html},
                  }
 
@incollection{gie:00,
 author         = {R. Giering},
 editor         = {P. Kasibhatla and M. Heimann and P. Rayner and
                  N. Mahowald and R.G. Prinn and D.E. Hartley},
 year           = 2000,
 booktitle      = {Inverse methods in global biogeochemical cycles},
 title          = {Tangent linear and adjoint biogeochemical models},
 publisher      = {American Geophysical Union},
 series         = {Geophysical Monograph},
 volume         = {114},
 address        = {Washington, DC},
 pages          = {33--48},
                  }

@Article{gil-lem:89,
 author         = {J.C. Gilbert and C. Lemar\'echal},
 year           = 1989,
 title          = {Some numerical experiments with variable-storage
                   quasi-Newton algorithms},
 journal        = {Math. Programming},
 volume         = {45},
 pages          = {407--435},
                  }
 
@book{gil-eta:81,
 author         = {P.E. Gill and W. Murray and M.H. Wright},
 title          = {Practical optimization},
 year           = 1981,
 publisher      = {Academic Press},
 address        = {London}, 
 pages          = {401 pp.},
                  }
                                  
@incollection{gri:89,
 author         = {A. Griewank},
 year           = 1989,
 title          = {On automatic differentiation},
 booktitle      = {Mathematical Programming: Recent Developments and
                  Applications},
 pages          = {83--108},
 editor         = {M. Iri and K. Tanabe},
 publisher      = {Kluwer},
 address        = {Dordrecht, NL},
                  }
 
@Article{gri:92,
  author =       {A.~Griewank},
  title =        {Achieving logarithmic growth of temporal and spatial
  complexity in reverse {A}utomatic {D}ifferentiation},
  journal       = {Optimization Methods and Software},
  year          = {1992},
  volume        = {1},
  pages         = {35--54}
}

@book{gri:00,
 author         = {A. Griewank},
 title          = {Evaluating Derivatives. Principles and Techniques
                  of Algorithmic Differentiation},
 year           = 2000,
 series         = {Frontiers in Applied Mathematics},
 volume         = {19},
 publisher      = {SIAM},
 address        = {Philadelphia}, 
 pages          = {369 pp.},
                  }
                                  
@Article{hal-eta:82,
 author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger},
 year           = 1982,
 title          = {Sensitivity analysis of a radiative-convective
                  model by the adjoint method},
 journal        = jas,
 volume         = {39},
 pages          = {2038--3050},
                  }

@Article{Haney,
  author =       {R.L. Haney},
  title =        {Surface thermal boundary conditions for ocean
                  circulation models},
  journal =      jpo,
  year =         1971,
  volume =       1,
  pages =        {241--248}
}
 
@Article{held-suar:94,
 author         = {I.M. Held and M.J. Suarez},
 year           = {1994},
 title          = {A proposal for the intercomparison of the dynamical cores of atmospheric general circulation models},
 journal        = {Bulletin of the American Meteorological Society},
 volume         = {75(10)},
 pages          = {1825-1830}
}
 
@Article{hil-eta:01,
 author         = {C. Hill and M. Follows and V. Bugnion and 
                  J. Marshall},
 year           = {2002},
 title          = {Spatial and Temporal Impacts of ocean general 
                  circulation on carbon sequestration},
 journal        = {Global Biogeochemical Cycles},
 note           = {submitted},
                  }

@ARTICLE{hib80,
  AUTHOR      = "W. D. {Hibler, III}",
  TITLE       = "Modeling a Variable Thickness Sea Ice Cover",
  JOURNAL     = mwr,
  YEAR        = 1980,
  VOLUME      = 1,
  PAGES       = "1943-1973"
}

@Article{Holland75,
 author         = {W.R. Holland and L. B. Lin},
 year           = {1975a},
 title          = {On the origin of mesoscale eddies and their contribution 
                   to the general circulation of the ocean. I. A preliminary 
                   numerical experiment},
 journal        = jpo,
 volume         = {5},
 pages          = {642-657}
                  }

@Article{hol-lin:75b,
 author         = {W.R. Holland and L. B. Lin},
 year           = {1975b},
 title          = {On the origin of mesoscale eddies and their contribution 
                   to the general circulation of the ocean. II. A parameter
                   study},
 journal        = jpo,
 volume         = {5},
 pages          = {658-669}
                  }

@book{kas-eta:00,
 author         = {P. Kasibhatla and M. Heimann and P. Rayner and
                  N. Mahowald and R.G. Prinn and D.E. Hartley},
 year           = 2000,
 title          = {Inverse methods in global biogeochemical cycles},
 publisher      = {American Geophysical Union},
 series         = {Geophysical Monograph},
 volume         = {114},
 address        = {Washington, DC},
 pages          = {324 pp.},
                  }

@Article{lar-eta:94,
 author         = {W.G. Large and J.C. McWilliams and S.C. Doney},
 year           = 1994,
 title          = {Oceanic vertical mixing: A review and a model
                  with nonlocal boundary layer parameterization},
 journal        = {Rev.~Geophys.},
 volume         = {32},
 pages          = {363--403},
                  }
 
@Article{lar-eta:97,
 author         = {W.G. Large and G. Danabasoglu and S.C. Doney 
                  and J.C. McWilliams},
 year           = 1997,
 title          = {Sensitivity to surface forcing and boundary layer
                  mixing in a global ocean model: annual-mean
                  climatology},
 journal        = jpo,
 volume         = {27},
 pages          = {2418--2447},
                  }
 
@Article{led-tal:86,
 author         = {F.-X. {Le Dimet} and O. Talagrand},
 year           = 1986,
 title          = {Variational algorithms for analysis and
                  assimilation of meteorological observations:
                  theoretical aspects},
 journal        = tel,
 volume         = {38A},
 pages          = {97--110},
                  }

@TechReport{lev:94a,
  author =       {S. Levitus and T.P.Boyer},
  title =        {{World Ocean Atlas 1994 Volume 3: Salinity}},
  institution =  {NOAA Atlas NESDIS 3},
  year =         1994,
  OPTkey =       {},
  OPTtype =      {},
  OPTnumber =    {},
  OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
  OPTmonth =     {},
  OPTnote =      {},
  OPTannote =    {}
}


@TechReport{Levitus94,
  author =       {S. Levitus and T.P.Boyer},
  title =        {{World Ocean Atlas 1994 Volume 4: Temperature}},
  institution =  {NOAA Atlas NESDIS 4},
  year =         1994,
  OPTkey =       {},
  OPTtype =      {},
  OPTnumber =    {},
  OPTaddress =   {U.S. Department of Commerce, Washington D.C.},
  OPTmonth =     {},
  OPTnote =      {},
  OPTannote =    {}
}

 
@Article{lew-der:85,
 author         = {J. Lewis and J. Derber},
 year           = {1985},
 title          = {The use of adjoint equations to solve a variational
                  adjustment problem with advective constraints},
 journal        = {Tellus},
 volume         = {37A},
 pages          = {309--322},
                  }
 
@techreport{lon:88,
 author         = {R.B. Long},
 year           = 1988,
 title          = {Notes on assimilating observations into
                  numerical models},
 institution    = {Delft Hydraulics},
 type           = {Report},
 number         = {~},
 pages          = {38 pp.},
 address        = {Delft (NL)},
                  }
 
@Article{maro-wun:93,
 author         = {J. Marotzke and C. Wunsch},
 year           = 1993,
 title          = {Finding the steady state of a general circulation
                  model through data assimilation:
                  Application to the North Atlantic Ocean},
 journal        = jgr,
 volume         = {98, C11},
 pages          = {20,149--20,167},
                  }
 
@Article{maro-eta:99,
 author         = {J. Marotzke and R. Giering and K.Q. Zhang and 
                  D. Stammer and C. Hill and T. Lee},
 year           = 1999,
 title          = {Construction of the adjoint MIT ocean general
                  circulation model and application to Atlantic heat
                  transport variability},
 journal        = jgr,
 volume         = {104, C12},
 pages          = {29,529--29,547},
                  }
 
@Article{mars-eta:97a,
 author         = {J. Marshall and C. Hill and L. Perelman and
                  A. Adcroft},
 year           = {1997a},
 title          = {Hydrostatic, quasi-hydrostatic and
                  nonhydrostatic ocean modeling},
 journal        = jgr,
 volume         = {102, C3},
 pages          = {5,733--5,752},
                  }
 
@Article{mars-eta:97b,
 author         = {J. Marshall and A. Adcroft and C. Hill and 
                  L. Perelman and C. Heisey},
 year           = {1997b},
 title          = {Hydrostatic, quasi-hydrostatic and
                  nonhydrostatic ocean modeling},
 journal        = jgr,
 volume         = {102, C3},
 pages          = {5,753--5,766},
                  }
 
@Article{mars-sha:98,
 author         = {J. Marshall and H. Jones and C. Hill},
 year           = 1998,
 title          = {Efficient ocean modeling using
                  non-hydrostatic algorithms},
 journal        = jms,
 volume         = {18},
 pages          = {115--134},
                  }
 
@Article{mcw:96,
 author         = {J. McWilliams},
 year           = 1996,
 title          = {Modeling the oceanic general circulation},
 journal        = arfm,
 volume         = {28},
 pages          = {215--248},
                  }

%% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies
%% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997.
%% (Available from Unidata or in PostScript form by anonymous FTP from 
%%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also 
%%   a hypertext version of the User's Guide available at 
%%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's 
%%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are 
%%   also available.

@TechReport{rew:97,
  author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies},
  title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90}, 
                  An Interface for Data Access, Version 3},
  institution =  {Unidata Program Center},
  type =         {Report},
  address =      {Boulder, Colorado},
  year =         1997,
  note =         {http://www.unidata.ucar.edu/packages/netcdf/},
}


@Article{res-eta:98,
 author         = {J.M. Restrepo and G.K. Leaf and A. Griewank},
 year           = 1998,
 title          = {Circumventing storage limitations in variational
                  data assimilation studies},
 journal        = {SIAM J. Sci. Comput.},
 volume         = {19},
 pages          = {1586--1605},
                  }
 
@Article{ros-eta:93,
 author         = {N. Rostaing and S. Dalmas and A. Galligo},
 year           = 1993,
 title          = {Automatic differentiation in Odyss{\'e}e},
 journal        = {Tellus},
 volume         = {45A},
 pages          = {558--568},
                  }
 
@incollection{she-and:89,
 author         = {J. Sheinbaum and D.L.T. Anderson},
 year           = 1989,
 title          = {Assimilation of XBT data using a variational 
                  technique},
 booktitle      = {Oceanic circulation models:
                  Combining data and dynamics},
 pages          = {257--285},
 series         = {NATO ASI Series},
 volume         = {C 284},
 editor         = {{D.L.T. Anderson and J. Willebrand}},
 publisher      = {Springer-Verlag},
 address        = {Berlin (Germany)},
                  }

@Article{DaSilva94,
 author         = {A. da Silva and A. C. Young and S. Levitus},
 year           = 1994,
 title          = {Atlas of Surface Marine Data 1994, Volume 1: Algorithms and Procedures},
 journal        = {NOAA Atlas NESDIS},
 volume         = {6},
 publisher      = {U.S. Department of Commerce},
 address        = {Washington, D.C. (USA)},
 note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/},
                  }
 
@techreport{sta-eta:97,
 author         = {D. Stammer and C. Wunsch and R. Giering and
                  Q. Zhang and J. Marotzke and J. Marshall and
                  C. Hill},
 year           = 1997,
 title          = {The global ocean circulation estimated from 
                  TOPEX/POSEIDON altimetry and a general circulation
                  model},
 institution    = {Center for Global Change Science, Massachusetts
                  Institute of Technology},
 type           = {Technical Report},
 number         = {49},
 pages          = {40 pp.},
 address        = {Cambridge (MA), USA},
                  }
 
@Article{sta-eta:01,
 author         = {D. Stammer and C. Wunsch and R. Giering and
                  C. Eckert and P. Heimbach and J. Marotzke and
                  A. Adcroft and C. Hill and J. Marshall},
 year           = 2001,
 title          = {The global ocean circulation during 1992 -- 1997,
                  estimated from ocean observations and a general
                  circulation model},
 journal        = jgr,
 note           = {in press},
                  }

@Article{Stommel66,
 author         = {H. Stommel},
 year           = 1948,
 title          = {The western intensification of wind-driven ocean currents},
 journal        = {Trans. Am. Geophys. Union},
 volume         = {29},
 pages          = {206},
                  }

@Article{tal-cou:87,
 author         = {O. Talagrand and P. Courtier},
 year           = 1987,
 title          = {Variational assimilation of meteorological 
                  observations with the adjoint vorticity equation.
                  I: Theory},
 journal        = qjrms,
 volume         = {113},
 pages          = {1311--1328},
                  }
 
@Article{tal:97,
 author         = {O. Talagrand},
 year           = 1997,
 title          = {Assimilation of observations, an introduction},
 journal        = {J.~Meteor.~Soc.~Japan},
 volume         = {75},
 pages          = {191--209},
                  }
 
@book{tar:87,
 author         = {A. Tarantola},
 title          = {Inverse Problem Theory: Methods for data fitting
                  and model parameter estimation},
 year           = 1987,
 publisher      = {Elsevier},
 address        = {Amsterdam}, 
 pages          = {629 pp.},
                  }
                                  
@techreport{tha:87,
 author         = {W.C. Thacker},
 year           = 1987,
 title          = {Three lectures on fitting numerical models to
                  observations},
 institution    = {GKSS},
 type           = {Report},
 number         = {87/E/65},
 pages          = {64 pp.},
 address        = {Geesthacht (D)},
                  }
 
@Article{tha-lon:88,
 author         = {W.C. Thacker and R.B. Long},
 year           = 1988,
 title          = {Fitting dynamics to data},
 journal        = jgr,
 volume         = {93, C2},
 pages          = {1,227--1,240},
                  }
 
@Article{tha:88,
 author         = {W.C. Thacker},
 year           = 1988,
 title          = {Fitting models to inadequate data by enforcing
                  spatial and temporal smoothness},
 journal        = jgr,
 volume         = {93},
 pages          = {10,655--10,665},
                  }
 
@Article{tha:89,
 author         = {W.C. Thacker},
 year           = 1989,
 title          = {The role of the Hessian matrix in fitting models
                  to measurements},
 journal        = jgr,
 volume         = {94, C5},
 pages          = {6,177--6,196},
                  }
 
@Article{tha-rag:94,
 author         = {W.C. Thacker and R. Raghunath},
 year           = 1994,
 title          = {The rigid lid's contribution to the ill-conditioning
                  of oceanic inverse problems},
 journal        = jgr,
 volume         = {99, C5},
 pages          = {10,131--10,141},
                  }
 
@Article{tzi-tha:89,
 author         = {E. Tziperman and W.C. Thacker},
 year           = {1989},
 title          = {An optimal control / adjoint equation approach
                  to studying the ocean general circulation},
 journal        = jpo,
 volume         = {19},
 pages          = {1471--1485},
                  }
 
@Article{tzi-eta:92a,
 author         = {E. Tziperman and W.C. Thacker and R.B. Long and
                  S. Hwang},
 year           = {1992a},
 title          = {Oceanic data analysis using a general circulation
                  model. I: Simulations},
 journal        = jpo,
 volume         = {22},
 pages          = {1434--1457},
                  }
 
@Article{tzi-eta:92b,
 author         = {E. Tziperman and W.C. Thacker and R.B. Long and
                  S. Hwang and S.R. Rintoul},
 year           = {1992b},
 title          = {Oceanic data analysis using a general circulation
                  model. I: A North Atlantic model},
 journal        = jpo,
 volume         = {22},
 pages          = {1458--1485},
                  }
 
@book{wun:96,
 author         = {C. Wunsch},
 title          = {The ocean circulation inverse problem},
 year           = 1996,
 publisher      = cup,
 address        = {Cambridge (UK)}, 
 pages          = {442 pp.},
                  }
                                  
@Article{zha-mar:99,
 author         = {K.Q. Zhang and J. Marotzke},
 year           = 1999,
 title          = {The importance of open-boundary estimation for an
                  Indian Ocean GCM-data synthesis},
 journal        = {J.~Marine Res.},
 volume         = {57},
 pages          = {305--334},
                  }


@InCollection{hill:95,
  author =       {Hill, C. and J. Marshall},
  title =        {Application of a Parallel Navier-Stokes Model to
                  Ocean Circulation in Parallel Computational Fluid
                  Dynamics},
  booktitle =    {Implementations and Results Using Parallel
                  Computers},
  pages =        {545-552},
  publisher =    {Elsevier Science B.V.: New York},
  year =         1995,
  editor =       {A. Ecer, J. Periaux, N. Satofuka and S. Taylor}
}


@Article{marshall:97a,
  author =       {Marshall, J. and C. Hill and L. Perelman and A. Adcroft},
  title =        {Hydrostatic, quasi-hydrostatic, and nonhydrostatic ocean
                 modeling},
  journal =      jgr,
  year =         1997,
  volume =       102,
  number =       {C3},
  pages =        {5733-5752}
}

@Article{marshall:97b,
  author =       {Marshall, J. and A. Adcroft and C. Hill and L. Perelman and C. Heisey},
  title =        {A finite-volume, incompressible Navier Stokes model for
                  studies of the ocean on parallel computers},
  journal =      jgr,
  year =         1997,
  volume =       102,
  number =       {C3},
  pages =        {5753-5766}
}

@Article{adcroft:97,
  author =       {Adcroft, A.J. and Hill, C.N. and J. Marshall},
  title =        {Representation of topography by shaved cells in a height
                  coordinate ocean model},
  journal =      mwr,
  year =         1997,
  volume =       125,
  pages =        {2293-2315}
}

@Article{adcroft:04a,
  author =       {Adcroft, A. and J.-M. Campin},
  title =        {Re-scaled height coordinates for accurate representation
                  of free-surface flows in ocean circulation models},
  journal =      om,
  year =         2004,
  volume =       7,
  pages =        {269-284}
}

@Article{adcroft:04b,
  author =       {Adcroft, A. and J.-M. Campin and C. Hill and J. Marshall},
  title =        {Implementation of an Atmosphere-Ocean General Circulation Model
                  on the Expanded Spherical Cube},
  journal =      mwr,
  year =         2004,
  volume =       132,
  pages =        {2845-2863}
}

@Article{marshall:04,
  author =       {Marshall, J. and A. Adcroft and J.-M. Campin and C. Hill and A. White},
  title =        {Atmosphere-Ocean Modeling Exploiting Fluid Isomorphisms},
  journal =      mwr,
  year =         2004,
  volume =       132,
  pages =        {2882-2894}
}

@Article{visbeck:97,
  author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall},
  title =        {Specification of eddy transfer coefficients in
                  coarse-resolution ocean circulation models},
  journal =      jpo,
  year =         1997,
  volume =       27,
  number =       3,
  pages =        {381-402}
}

@Article{shaw:98,
  author =       {Shaw; A. Arvind, Cho, K.-C., Hill, C., Johnson, R.P.
                  and Marshall, J.},
  title =        {A comparison of implicitly parallel multi-threaded and
                  data-parallel implementations of an ocean model based
                  on the Navier-Stokes equations},
  journal =      {J. of Parallel and Distributed Computing},
  year =         1998,
  volume =       48,
  number =       1,
  pages =        {1-51}
}

@Article{marshall:98,
  author =       {J. Marshall and H. Jones and C. Hill},
  title =        {Efficient ocean modeling using non-hydrostatic algorithms},
  journal =      {JMR},
  year =         1998,
  volume =       18,
  pages =        {115-134}
}

@Article{mjn:99,
  author =       {Marshall, J., Jamous, D and J. Nilsson},
  title =        {Reconciling `thermodynamic' and `dynamic' methods of
                  computation of water-mass transformation rates},
  journal =      {DSR},
  year =         1999,
  volume =       46,
  pages =        {545-572}
}

@Article{ms:99,
  author =       {Marshall, J and F. Schott},
  title =        {Open ocean deep convection: observations, models and theory},
  journal =      {Rev. Geophys.},
  year =         1999,
  volume =       37,
  number =       1,
  pages =        {1-64}
}

@Article{adcroft:99,
  author =       {Adcroft, A., Hill C. and J. Marshall},
  title =        {A new treatment of the Coriolis terms in C-grid models
                  at both high and low resolutions},
  journal =      mwr,
  year =         1999,
  volume =       127,
  pages =        {1928-1936}
}

@InProceedings{hill:99,
  author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall},
  title =        {A Strategy for Terascale Climate Modeling},
  booktitle =    {In Proceedings of the Eighth ECMWF Workshop on the Use of Parallel Processors in Meteorology},
  year =         1999,
  pages = {406-425},
  publisher =    {World Scientific},
}

@Article{wardle:00,
  author =       {Wardle R. and Marshall J.},
  title =        {Representation of eddies in primitive equation models by a PV flux},
  journal =      jpo,
  year =         2000,
  volume =       30,
  number =       10,
  pages =        {2481-2503}
}

@Article{ac:02,
  author =       {Adcroft, A. and J.-M. Campin},
  title =        {Comparison of finite volume schemes and direct-space-time
                  methods for ocean circulation models},
  journal =      om,
  year =         2002,
  note =         {in preparation}
}

@Article{adcroft:02,
  author =       {Adcroft, A., et~al.},
  title =        {Energy conversion in discrete numerical models},
  journal =      om,
  year =         2002,
  note =         {in preparation}
}

@InCollection{arakawa:77,
  author =       {Arakawa, A. and Lamb, V.},
  title =        {Computational Design of the Basic Dynamical Processes of
                  the UCLA General Circulation Model},
  booktitle =    {Methods in Computational Physics},
  pages =        {174-267},
  publisher =    {Academic Press},
  year =         1977,
  volume =       17
}

@Article{miller_white:84,
  author =       {Miller, M. J. and White, A. A.},
  title =        {On the non-hydrostatic equations in pressure
                  and sigma coordiantes},
  journal =      qjrms,
  year =         1984,
  volume =       110,
  pages =        {515-533}
}

@Article{white:89,
  author =       {White, A. A.},
  title =        {An extended version of a nonhydrostatic, pressure coordiante model},
  journal =      qjrms,
  year =         1989,
  volume =       115,
  pages =        {1243-1251}
}

@Article{adcroft:98,
  author =       {Adcroft, A. and Marshall, D.},
  title =        {How slippery are piecewise-constant coastlines in numerical
                  ocean models?},
  journal =      {Tellus},
  year =         1998,
  volume =       50,
  number =       1,
  pages =        {95-108}
}

@PhdThesis{adcroft:95,
  author =       {Adcroft, A.},
  title =        {Numerical Algorithms for use in a Dynamical Model of the
                  Ocean},
  school =       {Imperial College, London},
  year =         1995
}

@Article{griffies:00,
  author =       {Griffies, S.,M. and Hallberg, R.,W.},
  title =        {Biharmonic friction with a Smagorinsky-like viscosity for
                  use in large-scale eddy-permitting ocean models},
  journal =      mwr,
  year =         2000,
  volume =       128,
  number =       8,
  pages =        {2935-2946}
}

@Article{wajsowicz:93,
  author =       {Wajsowicz, R.},
  title =        {A CONSISTENT FORMULATION OF THE ANISOTROPIC STRESS TENSOR
                  FOR USE IN MODELS OF THE LARGE-SCALE OCEAN CIRCULATION},
  journal =      jcp,
  year =         1993,
  volume =       105,
  number =       2,
  pages =        {333-338}
}

@Article{campin:02,
  author =       {Campin, J.-M. and A. Adcroft and C. Hill and J. Marshall},
  title =        {Conservation of properties in a free-surface model},
  journal =      om,
  year =         2004,
  volume =       6,
  pages =        {221-244}
}

@Article{dm:95,
  author =       {Danabasoglu, G. and McWilliams J.C.},
  title =        {Sensitivity of the global ocean circulation to parameterizations of mesoscale tracer transports},
  journal =      jclim,
  year =         1995,
  volume =       8,
  number =       12,
  pages =        {2967-2987}
}

@Article{ldd:97,
  author =       {Large, W.G. and Danabasoglu, G. and Doney, S.C. and McWilliams, J.C.},
  title =        {Sensitivity to surface forcing and boundary layer mixing in a global ocean model: Annual-mean climatology},
  journal =      jpo,
  year =         1997,
  volume =       27,
  number =       11,
  pages =        {2418-2447}
}

@Article{gkw:99,
  author =       {Gerdes R. and Koberle C. and Beckmann A. and Herrmann P. and Willebrand J.},
  title =        {Mechanisms for spreading of Mediterranean water in
                  coarse-resolution numerical models},
  journal =      jpo,
  year =         1999,
  volume =       29,
  number =       8,
  pages =        {1682-1700}
}

@incollection{roe:85,
 author         = {P.L. Roe},
 year           = 1985,
 title          = {Some contributions to the modelling of discontinuous flows},
 booktitle      = {Large-Scale Computations in Fluid Mechanics},
 series         = {Lectures in Applied Mathematics},
 volume         = 22,
 pages          = {163-193},
 editor         = {B.E. Engquist and S. Osher and R.C.J. Somerville},
 publisher      = {American Mathematical Society},
 address        = {Providence, RI},
}

@Article{trenberth90,
  author =       {K. M. Trenberth and J. Olson and W. G. Large},
  title =        {The Mean Annual Cycle in {G}lobal {O}cean Wind
                  Stress},
  journal =      jpo,
  year =         1990,
  volume =       20,
  pages =        {1742--1760}
}

@Article{molteni:03,
  author =       {F. Molteni},
  title =        {Atmospheric simulations using a GCM with simplified physical
                  parametrizations, I: Model climatology and variability in 
                  multidecadal experiments},
  journal =      climd,
  year =         2003,
  volume =       20,
  pages =        {175--191}
}

@Article{jiang99,
  author =       {S. Jiang and P. H. Stone and P. Malanotte-Rizzoli},
  title =        {An Assessment of the {G}eophysical {F}luid
                  {D}ynamics {L}aboratory Ocean Model with Coarse
                  Resolution: Annual-Mean Climatology},
  journal =      jgr,
  year =         1999,
  volume =       104,
  number =       {C11},
  pages =        {25,623--25,645}
}

@Article{szoeke02,
  author =       {de Szoeke, Roland A. and Roger M. Samelson},
  title =        {The Duality between the {B}oussinesq and
                  {N}on-{B}oussinesq Hydrostatic Equations of Motion},
  journal =      jpo,
  year =         2002,
  volume =       32,
  number =       8,
  pages =        {2194--2203}
}

@Article{jackett95,
  author =       {David R. Jackett and Trevor J. McDougall},
  title =        {Minimal Adjustment of Hydrographic Profiles to
                  Achieve Static Stability},
  journal =      jaot,
  year =         1995,
  volume =       12,
  number =       4,
  pages =        {381--389}
}

@Article{mcdougall03,
  author =       {Trevor J. McDougall and David R. Jackett and Daniel
                  G. Wright and Rainer Feistel},
  title =        {Accurate and Computationally Efficient Algorithms
                  for Potential Temperature and Density of Seawater},
  journal =      jaot,
  year =         {2003},
  OPTkey =       {},
  OPTvolume =    {},
  OPTnumber =    {},
  OPTpages =     {},
  OPTmonth =     {},
  OPTnote =      {{\textup{In press}}},
  OPTannote =    {}
}

@TechReport{fofonoff83,
  author =       "Fofonoff, P. and Millard, Jr., R.C.",
  title =        "Algorithms for Computation of Fundamental Properties
                  of Seawater",
  institution =  "Unesco",
  year =         1983,
  type =         "Unesco Technical Papers in Marine Science",
  number =       44,
  pages =        {53 pp.}
}

@ARTICLE{zha98a,
  AUTHOR      = "J. Zhang and W. D. {Hibler, III} and M. Steele
                 and D. A. Rothrock",
  TITLE       = "Arctic ice-ocean modeling with and without climate restoring",
  JOURNAL     = jpo,
  YEAR        = 1998,
  VOLUME      = 28,
  PAGES       = "191-217"
}

@ARTICLE{sem76,
  AUTHOR      = "Semtner, Jr., Albert J.",
  TITLE       = "A model for the thermodynamic growth of sea ice in
                 numerical investigations of climate",
  JOURNAL     = jpo,
  YEAR        = 1976,
  VOLUME      = 6,
  PAGES       = "379-389"
}

@ARTICLE{win00,
  AUTHOR      = "M. Winton",
  TITLE       = "A reformulated three-layer sea ice model",
  JOURNAL     = jaot,
  YEAR        = 2000,
  VOLUME      = 17,
  PAGES       = "525-531"
}

@ARTICLE{hib79, 
  AUTHOR      = "W. D. {Hibler, III}", 
  TITLE       = "A Dynamic Thermodynamic Sea Ice Model",
  JOURNAL     = jpo,
  YEAR        = 1979,
  VOLUME      = 9,
  PAGES       = "815-846"
}

@ARTICLE{fla92,
  AUTHOR      = "G. M. Flato and W. D. {Hibler, III}",
  TITLE       = "Modeling pack ice as a cavitating fluid",
  JOURNAL     = jpo,
  YEAR        = 1992,
  VOLUME      = 22,
  PAGES       = "626-651"
}

@ARTICLE{hun97,
  AUTHOR      = "E. C. Hunke and J. K. Dukowicz",
  TITLE       = "An elastic-viscous-plastic model for sea ice dynamics",
  JOURNAL     = jpo,
  YEAR        = 1997,
  VOLUME      = 27,
  PAGES       = "1849-1867"
}

@ARTICLE{zha00,
  AUTHOR      = "Jinlun Zhang and Drew Rothrock",
  TITLE       = "Modeling Arctic Sea Ice with an Efficient Plastic Solution",
  JOURNAL     = jgr,
  YEAR        = 2000,
  VOLUME      = 105,
  PAGES       = "3325-3338"
}

@Article{Shapiro_70,
  author =       {Shapiro, R.},
  title =        {Smoothing, filtering, and boundary effects},
  journal =      {Reviews of Geophysics and Space Physics},
  year =         {1970},
  volume =       {8},
  number =       {2},
  pages =        {359--387},
}

@TechReport{Dutkiewicz_etal_05,
  author =       {S. Dutkiewicz and A. Sokolov and J. Scott and P. Stone},
  title =        {A Three-Dimensional Ocean-Seaice-Carbon Cycle Model and 
                  its Coupling to a Two-Dimensional Atmospheric Model: Uses 
                  in Climate Change Studies, Report 122},
  institution =  {MIT Joint Program of the Science and Policy of Global Change},
  year =         {2005},
  OPTnumber =    {122},
  address =      {Cambridge, MA},
  note =         {http://web.mit.edu/globalchange/www/MITJPSPGC\_Rpt122.pdf},
}

@Article{Follows_etal_05,
  author =       {M. Follows and T. Ito and S. Dutkiewicz},
  title =        {A Compact and Accurate Carbonate Chemistry Solver for Ocean
                  Biogeochemistry Models},
  journal =      {Ocean Modeling},
  year =         {{in press}},
  OPTkey =       {},
  OPTvolume =    {},
  OPTnumber =    {},
  OPTpages =     {},
}

@Article{McKinley_etal_04,
  author =       {G. McKinley and M. J. Follows and J. C. Marshall},
  title =        {Mechanisms of air-sea CO$_2$ flux variability in the 
                  Equatorial Pacific and the North Atlantic},
  journal =      {Global Biogeochemical Cycles},
  year =         {2004},
  OPTkey =       {},
  volume =       {18},
  number =       {doi:10.1029/2003GB002179},
  OPTpages =     {},
}

@TechReport{Trenberth_etal_89,
  author =       {K. Trenberth and J. Olson and W. Large},
  title =        {A global wind stress climatology based on ECMWF analyses},
  institution =  {NCAR},
  year =         {1989},
  OPTkey =       {},
  OPTtype =      {},
  number =       {NCAR/TN-338+STR},
  address =      {Boulder, CO},
  OPTmonth =     {},
}

@Article{Wanninkhof_92,
  author =       {R. Wanninkhof},
  title =        {Relationship between wind speed and gas exchange over the ocean},
  journal =      jgr,
  year =         {1992},
  OPTkey =       {},
  volume =       {97},
  OPTnumber =    {},
  pages =        {7373--7382},
  OPTmonth =     {},
}

@incollection{black:77,
 author       = {A. K. Blackadar},
 year         = {1977},
 title        = {High Resolution Models of the Planetary Boundary Layer.},
 booktitle    = {Advances in Environmental Science and Engineering, Vol 1 } ,
 editor       = {Pfafflin and Zeigler},
 publisher    = {Gordon and Breach, Scientific Publishers}
}
 
@Article{chou:92,
 author       = {M-D. Chou},
 year         = {1992},
 title        = {A solar radiation model for use in climate studies.},
 journal      = jas, 
 volume       = {49},
 pages        = {762-772}
}

@Article{chou:90,
 author       = {M-D. Chou},
 year         = {1990},
 title        = {Parameterizations for the absorption of solar radiation
                   by O$_2$ and CO$_2$ with applications to climate studies.},
 journal      = jclim,
 volume       = {3},
 pages        = {209-217}
}

@techreport{chsz:94,
 author       = {M.-D. Chou and M.J.Suarez},
 year         = {1994},
 title        = {An efficient thermal infrared radiation parameterization
for use in general circulation models},
 institution  = {National Aeronautics and Space Administration}, 
 type         = {NASA Technical Memorandum}, 
 number       = {104606-Vol 3}, 
 address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
 note         = {http://www.gmao.nasa.gov/}
}

@Article{clarke:70,
 author       = {R. H. Clarke},
 year         = {1970},
 title        = {Observational studies in the atmospheric boundary layer.},
 journal      = qjrms, 
 volume       = {96},
 pages        = {91-114}
}

@Article{deftow:94,
 author       = { R. S. Defries and J. R. G. Townshend},
 year         = {1994},
 title        = {NDVI-derived Land Cover Classification at Global Scales. },
 journal      = {Int'l J. Rem. Sens.} ,
 volume       = {15},
 pages        = {3567-3586} 
}

@Article{dorsell:89,
 author       = { J. L. Dorman and P. J. Sellers},
 year         = {1989},
 title        = {A global climatology of albedo, roughness length and stomatal 
resistance for atmospheric general circulation models as represented by the Simple Biosphere model (SiB).},
 journal      = jam, 
 volume       = {28},
 pages        = {833-855}
}

@Article{helflab:88,
 author       = { H. M. Helfand and J. C. Labraga},
 year         = {1988},
 title        = { Design of a non-singular level 2.5 second-order closure
model for the prediction of atmospheric turbulence. },
 journal      = jas, 
 volume       = {45},
 pages        = {113-132}
}

@inproceedings{helfetal:91,
 author       = {H. M. Helfand and M. Fox-Rabinovitz and L. Takacs and A. Molod},
 year         = {1991},
 title        = {Simulation of the planetary boundary layer and turbulence in the GLA GCM},
 booktitle    = {Proceedings of the AMS Ninth Conference on Numerical Weather Predicition},
 year         = 1991,
 pages        = {406-425},
 publisher    = {American Meteorological Society}
}

@Article{helfschu:95,
 author       = {H. M. Helfand and S. D. Schubert},
 year         = {1995},
 title        = { Climatology of the
Simulated Great Plains Low-Level Jet and Its contribution to the
Continental Moisture Budget of the United States. },
 journal      = jclim,
 volume       = {8},
 pages        = {784-806}
}

@Article{kondo:75,
 author       = {J. Kondo},
 year         = {1975},
 title        = {Air-sea bulk transfer coefficients in diabatic conditions.},
 journal      = blm, 
 volume       = {9},
 pages        = {91-112}
}

@techreport{ks:91,
 author       = { Randal D. Koster and Max J. Suarez},
 year         = {1991},
 title        = { A Simplified Treatment of SiB's Land Surface Albedo Parameterization.},
 institution  = {National Aeronautics and Space Administration}, 
 type         = {NASA Technical Memorandum}, 
 number       = {104538}, 
 address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
 note         = {http://www.gmao.nasa.gov/},
}

@Article{ks:92,
 author       = { Randal D. Koster and Max J. Suarez},
 year         = {1992},
 title        = { Modeling the Land Surface Boundary
in Climate Models as a Composite of Independent Vegetation Stands.},
 journal      = jgr,
 volume       = {97},
 pages        = {2697-2715}
}

@Article{lhans:74,
 author       = {A. A. Lacis and J. E. Hansen},
 year         = {1974},
 title        = { A parameterization for the absorption of solar radiation
in the Earth's atmosphere.  },
 journal      = jas, 
 volume       = {31},
 pages        = {118-133}
}

@Article{larpond:81,
 author       = {W. G. Large and S. Pond},
 year         = {1981},
 title        = {Open ocean momentum flux measurements in moderate to strong winds.},
 journal      = jpo, 
 volume       = {11},
 pages        = {324-336}
}

@Article{moorsz:92,
 author       = {S. Moorthi and M. J. Suarez},
 year         = {1992},
 title        = {  Relaxed Arakawa Schubert: A parameterization of moist
convection for general circulation models.},
 journal      = mwr, 
 volume       = {120},
 pages        = {978-1002}
}

@incollection{pano:73,
 author       = {H. A. Panofsky},
 year         = {1973},
 title        = {Tower Micrometeorology. },
 booktitle    = {Workshop on Micrometeorology},
 editor       = {D. A. Haugen},
 publisher    = {American Meteorological Society}
}

@Article{reynetal:94,
 author       = {R. W. Reynolds and T. M. Smith},
 year         = {1994},
 title        = {Improved global sea surface temperature analyses using optimum interpolation.},
 journal      = jclim, 
 volume       = {7},
 pages        = {929-948}
}

@Article{rosen:87,
 author       = {J. E. Rosenfield and M. R. Schoeberl and M. A. Geller},
 year         = {1987},
 title        = {  A computation of the stratospheric
diabatic circulation using an accurate radiative transfer model},
 journal      = jas, 
 volume       = {44},
 pages        = {859-876}
}

@Article{sudm:88,
 author       = {Y. C. Sud and A. Molod},
 year         = {1988},
 title        = {  The roles of dry convection, cloud-radiation feedback processes
and the influence of recent improvements in the parameterization of convection in the GLA GCM.  },
 journal      = mwr, 
 volume       = {116},
 pages        = {2366-2387}
}

@techreport{taksz:96,
 author       = {L. L. Takacs and M.J. Suarez},
 year         = {1996},
 title        = {  Dynamical aspects of climate simulations Using the GEOS
General Circulation Model},
 institution  = {National Aeronautics and Space Administration}, 
 type         = {NASA Technical Memorandum}, 
 number       = {104606 Volume 10}, 
 address      = {NASA; Goddard Space Flight Center; Greenbelt (MD), 20771; USA},
 note         = {http://www.gmao.nasa.gov/},
}

@Article{yagkad:74,
 author       = {A. M. Yaglom and B. A. Kader},
 year         = {1974},
 title        = {Heat and mass transfer between a rough wall and
turbulent fluid flow at high Reynolds and Peclet numbers.  },
 journal      = jfm, 
 volume       = {62},
 pages        = {601-623}
}

@Article{yam:77,
 author       = {T. Yamada},
 year         = {1977},
 title        = {  A numerical experiment on pollutant dispersion in a horizontally-homogenious
atmospheric boundary layer.},
 journal      = {Atmos. Environ.}, 
 volume       = {11},
 pages        = {1015-1024}
}

@Article{zhouetal:95,
 author       = {J. Zhou and Y.C. Sud and K.-M. Lau},
 year         = {1995},
 title        = {Impact of Orographically Induced Gravity Wave Drag in the GLA GCM},
 journal      = qjrms, 
 volume       = {122},
 pages        = {903-927}
}

@Article{breth:99,
 author         = {C. S. Bretherton and M.K. MacVean and P. Bechtold and A. Chlond 
                   and W.R. Cotton and J. Cuxart and H. Cuijpers and M. Khairoutdinov 
                   and B. Kosovic and D. Lewellen and C-H. Moeng and P. Siebesma and 
                   B. Stevens and D.E. Stevens and I. Sykes and M.C. Wyant}, 
 year           = 1999,
 title          = {An intercomparison of radiatively driven entrainment and turbulence 
                  in a smoke cloud, as simulated by different numerical models.}, 
 journal        = qjrms,
 volume         = {125}, 
 pages          = {391-423}
                  }

@Article{bm:99,
 author         = {A. C. Bushell and G.M. Martin}, 
 year           = 1999,
 title          = {The Impact of Vertical Resolution Upon GCM Simulations of Marine Stratocumulus.}, 
 journal        = {Climate Dyn.}, 
 volume         = {15}, 
 pages          = {293-318}
                  }

@Article{Inn:01,
 author         = {P. M. Inness and S.J. Slingo and R.B. Woolnough and B. Neale and V.D. Pope}, 
 year           = 2001,
 title          = {Organization of Tropical Convection in a GCM with Verying Vertical Resolution;
                  Implications for the Simulation of the Madden-Julian Oscillation.},
 journal        = {Climate Dyn.}, 
 volume         = {17}, 
 pages          = {777-794}
                  }

@Article{kal:89,
 author         = {E. Kalnay and M. Kanamitsu and J. Pfaendtner and J. Sela and M. Suarez and 
                   J. Stackpole and J. Tucillo and L. Umscheid and and D. Williamson}, 
 year           = 1989,
 title          = {Rules for Interchange of Physical Parameterizations.}, 
 journal        = bams, 
 volume         = {70}, 
 pages          = {620-622}
                  }

@Article{wo:98,
 author         = {D. Williamson and J.G. Olsen}, 
 year           = 1998,
 title          = {A Comparison of Semi-Langrangian and Eulerian Polar Climate Simulations.},
 journal        = mwr, 
 volume         = {126}, 
 pages          = {991-1000}
                  }
@TechReport{MPI-std-20,
  author =       {{Message Passing Interface Forum}}},
  title =        {{MPI}: A Message-Passing Interface standard (version 2.0)},
  institution =  {mpi-forum.org},
  year =         {1998},
}