| 1 | 
heimbach | 
1.1 | 
@string{arfm    = {Annu.~Rev.~Fluid Mech.}} | 
| 2 | 
  | 
  | 
@string{bams    = {Bull.~Am.~Met.~Soc.}} | 
| 3 | 
  | 
  | 
@string{blm     = {Bound.~Layer~Meteorol.}} | 
| 4 | 
jmc | 
1.14 | 
@string{climd   = {Clim.~Dynamics}} | 
| 5 | 
heimbach | 
1.1 | 
@string{jgr     = {J.~Geophys.~Res.}} | 
| 6 | 
  | 
  | 
@string{ijrs    = {Int.~J.~Remote Sensing}} | 
| 7 | 
  | 
  | 
@string{jas     = {J.~Atmos.~Sci.}} | 
| 8 | 
  | 
  | 
@string{jpo     = {J.~Phys.~Oceanogr.}} | 
| 9 | 
  | 
  | 
@string{jclim   = {J.~Clim.}} | 
| 10 | 
  | 
  | 
@string{ieee    = {IEEE Trans.~Geosci. Remote Sensing}} | 
| 11 | 
  | 
  | 
@string{jfm     = {J.~Fluid Mech.}} | 
| 12 | 
  | 
  | 
@string{jaot    = {J.~Atmos.~Ocean.~Technol.}} | 
| 13 | 
  | 
  | 
@string{jms     = {J.~Mar.~Sys.}} | 
| 14 | 
jmc | 
1.14 | 
@string{om      = {Ocean Modelling}} | 
| 15 | 
heimbach | 
1.1 | 
@string{gaos    = {Global Atmos.~Ocean System}} | 
| 16 | 
  | 
  | 
@string{grl     = {Geophys.~Res.~Lett.}} | 
| 17 | 
  | 
  | 
@string{dsr     = {Deep Sea Res.}} | 
| 18 | 
  | 
  | 
@string{dao     = {Dyn.~Atmos.~Oceans}} | 
| 19 | 
  | 
  | 
@string{mwr     = {Mon.~Wea.~Rev.}} | 
| 20 | 
  | 
  | 
@string{qjrms   = {{Q.~J.~R.~Meteorol.~Soc.}}} | 
| 21 | 
  | 
  | 
@string{tel     = {Tellus}} | 
| 22 | 
  | 
  | 
@string{cup     = {Cambridge University Press}} | 
| 23 | 
  | 
  | 
@string{esapub  = {ESA Publications Division, ESTEC, Noordwijk (NL)}} | 
| 24 | 
  | 
  | 
@string{ifremer = {IFREMER/CERSAT}} | 
| 25 | 
  | 
  | 
@string{igarss  = {IEEE Press, Piscataway, N.J., USA}} | 
| 26 | 
  | 
  | 
@string{dnmi    = {The Norwegian Meteorological Institute (DNMI)}} | 
| 27 | 
  | 
  | 
@string{dkrz    = {Deutsches Klimarechenzentrum (DKRZ)}} | 
| 28 | 
  | 
  | 
@string{mpi     = {MPI f\"ur Meteorologie}} | 
| 29 | 
  | 
  | 
@string{ecmwf   = {ECMWF}} | 
| 30 | 
  | 
  | 
@string{estec   = {European Space Research and Technology Centre | 
| 31 | 
  | 
  | 
                        (ESTEC)}} | 
| 32 | 
  | 
  | 
@string{esa     = {European Space Agency (ESA)}} | 
| 33 | 
  | 
  | 
 | 
| 34 | 
  | 
  | 
@Article{bis-eta:92, | 
| 35 | 
  | 
  | 
 author         = {C.H. Bishof and G.F. Corliss and L. Green and | 
| 36 | 
  | 
  | 
                   A. Griewank and K. Haigler and P. Newman}, | 
| 37 | 
  | 
  | 
 year           = 1992, | 
| 38 | 
  | 
  | 
 title          = {Automatic differentiation of advanced GFD codes | 
| 39 | 
  | 
  | 
                  for multidisciplinary design}, | 
| 40 | 
  | 
  | 
 journal        = {Journal on Computing Systems in Engineering}, | 
| 41 | 
  | 
  | 
 volume         = {3}, | 
| 42 | 
  | 
  | 
 pages          = {625--638}, | 
| 43 | 
  | 
  | 
                  } | 
| 44 | 
  | 
  | 
  | 
| 45 | 
  | 
  | 
@incollection{bis:94, | 
| 46 | 
  | 
  | 
 author         = {C.H. Bishof}, | 
| 47 | 
  | 
  | 
 year           = 1994, | 
| 48 | 
  | 
  | 
 title          = {Automatic differentiation, tangent linear models | 
| 49 | 
  | 
  | 
                  and pseudo-adjoints}, | 
| 50 | 
  | 
  | 
 booktitle      = {High Performance Computing in the Geosciences}, | 
| 51 | 
  | 
  | 
 series         = {Series C: Mathematical and Physical Sciences}, | 
| 52 | 
  | 
  | 
 pages          = {59--80}, | 
| 53 | 
  | 
  | 
 editor         = {F.X. {Le Dimet}}, | 
| 54 | 
  | 
  | 
 publisher      = {Kluwer}, | 
| 55 | 
  | 
  | 
 address        = {Dordrecht, NL}, | 
| 56 | 
  | 
  | 
                  } | 
| 57 | 
  | 
  | 
  | 
| 58 | 
  | 
  | 
@techreport{bis-eta:94, | 
| 59 | 
  | 
  | 
 author         = {C. Bishof and A. Carle and P. Khademi and | 
| 60 | 
  | 
  | 
                  A. Maurer}, | 
| 61 | 
  | 
  | 
 year           = 1994, | 
| 62 | 
  | 
  | 
 title          = {The ADIFOR 2.0 system for the automatic | 
| 63 | 
  | 
  | 
                  differentiation of FORTRAN 77 programs}, | 
| 64 | 
  | 
  | 
 institution    = {Argonne National Laboratory, Mathematics and | 
| 65 | 
  | 
  | 
                  Computer Science Division}, | 
| 66 | 
  | 
  | 
 type           = {Argonne Preprint}, | 
| 67 | 
  | 
  | 
 number         = {ANL-MCS-P981-1194}, | 
| 68 | 
  | 
  | 
 address        = {ANL; 9700 South Cass Ave.;  | 
| 69 | 
  | 
  | 
                  Argonne (ILL), 90439; USA}, | 
| 70 | 
  | 
  | 
 note           = {http://www.mcs.anl.gov/autodiff/}, | 
| 71 | 
  | 
  | 
                  } | 
| 72 | 
  | 
  | 
  | 
| 73 | 
  | 
  | 
@techreport{bis-roh:97, | 
| 74 | 
  | 
  | 
 author         = {C. Bishof and L. Roh}, | 
| 75 | 
  | 
  | 
 year           = 1997, | 
| 76 | 
  | 
  | 
 title          = {ADIC: An extensible automatic differentiation tool | 
| 77 | 
  | 
  | 
                  for ANSI-C}, | 
| 78 | 
  | 
  | 
 institution    = {Argonne National Laboratory, Mathematics and | 
| 79 | 
  | 
  | 
                  Computer Science Division}, | 
| 80 | 
  | 
  | 
 type           = {Argonne Preprint}, | 
| 81 | 
  | 
  | 
 number         = {ANL-MCS-P626-1196}, | 
| 82 | 
  | 
  | 
 address        = {ANL; 9700 South Cass Ave.;  | 
| 83 | 
  | 
  | 
                  Argonne (ILL), 90439; USA}, | 
| 84 | 
  | 
  | 
 note           = {http://www.mcs.anl.gov/autodiff/}, | 
| 85 | 
  | 
  | 
                  } | 
| 86 | 
  | 
  | 
  | 
| 87 | 
  | 
  | 
@Article{cou-tal:87, | 
| 88 | 
  | 
  | 
 author         = {P. Courtier and O. Talagrand}, | 
| 89 | 
  | 
  | 
 year           = 1987, | 
| 90 | 
  | 
  | 
 title          = {Variational assimilation of meteorological  | 
| 91 | 
  | 
  | 
                  observations with the adjoint vorticity equation. | 
| 92 | 
  | 
  | 
                  II: Numerical results}, | 
| 93 | 
  | 
  | 
 journal        = qjrms, | 
| 94 | 
  | 
  | 
 volume         = {113}, | 
| 95 | 
  | 
  | 
 pages          = {1329--1347}, | 
| 96 | 
  | 
  | 
                  } | 
| 97 | 
  | 
  | 
  | 
| 98 | 
  | 
  | 
@Article{cou-tal:90, | 
| 99 | 
  | 
  | 
 author         = {P. Courtier and O. Talagrand}, | 
| 100 | 
  | 
  | 
 year           = 1990, | 
| 101 | 
  | 
  | 
 title          = {Variational assimilation of meteorological | 
| 102 | 
  | 
  | 
                  observations with direct and adjoint shallow-water | 
| 103 | 
  | 
  | 
                  equations}, | 
| 104 | 
  | 
  | 
 journal        = tel, | 
| 105 | 
  | 
  | 
 volume         = {42A}, | 
| 106 | 
  | 
  | 
 pages          = {531--549}, | 
| 107 | 
  | 
  | 
                  } | 
| 108 | 
  | 
  | 
  | 
| 109 | 
  | 
  | 
@Article{cou-eta:94, | 
| 110 | 
  | 
  | 
 author         = {P. Courtier and J.-N. Th{\'e}paut and | 
| 111 | 
  | 
  | 
                  A. Hollingsworth}, | 
| 112 | 
  | 
  | 
 year           = 1994, | 
| 113 | 
  | 
  | 
 title          = {A strategy for operational implementation of | 
| 114 | 
  | 
  | 
                  4-D-VAR using an incremental approach}, | 
| 115 | 
  | 
  | 
 journal        = qjrms, | 
| 116 | 
  | 
  | 
 volume         = {120}, | 
| 117 | 
  | 
  | 
 pages          = {1367--1387}, | 
| 118 | 
  | 
  | 
                  } | 
| 119 | 
  | 
  | 
  | 
| 120 | 
  | 
  | 
@Article{err:97, | 
| 121 | 
  | 
  | 
 author         = {R.M. Errico}, | 
| 122 | 
  | 
  | 
 year           = 1997, | 
| 123 | 
  | 
  | 
 title          = {What is an adjoint model}, | 
| 124 | 
  | 
  | 
 journal        = bams, | 
| 125 | 
  | 
  | 
 volume         = {78}, | 
| 126 | 
  | 
  | 
 pages          = {2577--2591}, | 
| 127 | 
  | 
  | 
                  } | 
| 128 | 
  | 
  | 
  | 
| 129 | 
  | 
  | 
@Article{far-moo:92, | 
| 130 | 
  | 
  | 
 author         = {B.F. Farrell and A.M. Moore}, | 
| 131 | 
  | 
  | 
 year           = {1992}, | 
| 132 | 
  | 
  | 
 title          = {An adjoint method for obtaining the most rapidly | 
| 133 | 
  | 
  | 
                  growing perturbation to oceanic flows}, | 
| 134 | 
  | 
  | 
 journal        = jpo, | 
| 135 | 
  | 
  | 
 volume         = {22}, | 
| 136 | 
  | 
  | 
 pages          = {338--349}, | 
| 137 | 
  | 
  | 
                  } | 
| 138 | 
  | 
  | 
  | 
| 139 | 
  | 
  | 
@Article{far-ioa:96a, | 
| 140 | 
  | 
  | 
 author         = {B.F. Farrell and P. Ioannou}, | 
| 141 | 
  | 
  | 
 year           = {1996a}, | 
| 142 | 
  | 
  | 
 title          = {Generalized stability theory. Part I: | 
| 143 | 
  | 
  | 
                  Autonomous operators}, | 
| 144 | 
  | 
  | 
 journal        = jas, | 
| 145 | 
  | 
  | 
 volume         = {53}, | 
| 146 | 
  | 
  | 
 pages          = {2025--2040}, | 
| 147 | 
  | 
  | 
                  } | 
| 148 | 
  | 
  | 
  | 
| 149 | 
  | 
  | 
@Article{far-ioa:96b, | 
| 150 | 
  | 
  | 
 author         = {B.F. Farrell and P. Ioannou}, | 
| 151 | 
  | 
  | 
 year           = {1996b}, | 
| 152 | 
  | 
  | 
 title          = {Generalized stability theory. Part I: | 
| 153 | 
  | 
  | 
                  Nonautonomous operators}, | 
| 154 | 
  | 
  | 
 journal        = jas, | 
| 155 | 
  | 
  | 
 volume         = {53}, | 
| 156 | 
  | 
  | 
 pages          = {2041--2053}, | 
| 157 | 
  | 
  | 
                  } | 
| 158 | 
  | 
  | 
  | 
| 159 | 
  | 
  | 
@techreport{fau-pap:98, | 
| 160 | 
  | 
  | 
 author         = {C. Faure and Y. Papegay}, | 
| 161 | 
  | 
  | 
 year           = 1998, | 
| 162 | 
  | 
  | 
 title          = {Odyss{\'e}e User's Guide. Version 1.7}, | 
| 163 | 
  | 
  | 
 institution    = {Institut National de Recherche en Informatique | 
| 164 | 
  | 
  | 
                  et en Automatique}, | 
| 165 | 
  | 
  | 
 type           = {Rapport Technique}, | 
| 166 | 
  | 
  | 
 number         = {0224}, | 
| 167 | 
  | 
  | 
 address        = {INRIA; 2004, route des Luciolis, B.P. 93; | 
| 168 | 
  | 
  | 
                  06902 Sophia Antipolis Cedex; France}, | 
| 169 | 
  | 
  | 
 note           = {http://www-sop.inria.fr/safir/SAM/Odyssee/odyssee.html}, | 
| 170 | 
  | 
  | 
                  } | 
| 171 | 
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  | 
| 172 | 
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@Article{fau:00, | 
| 173 | 
  | 
  | 
 author         = {C. Faure}, | 
| 174 | 
  | 
  | 
 year           = {2000}, | 
| 175 | 
  | 
  | 
 title          = {Adjoining strategies for multi-layered programs}, | 
| 176 | 
  | 
  | 
 journal        = {Optimisation Methods and Software}, | 
| 177 | 
  | 
  | 
 note           = {in press}, | 
| 178 | 
  | 
  | 
                  } | 
| 179 | 
  | 
  | 
  | 
| 180 | 
  | 
  | 
@Article{gen-mcw:90, | 
| 181 | 
  | 
  | 
 author         = {P.R. Gent and J.C. McWilliams}, | 
| 182 | 
  | 
  | 
 year           = 1990, | 
| 183 | 
  | 
  | 
 title          = {Isopycnal mixing in ocean circulation models}, | 
| 184 | 
  | 
  | 
 journal        = jpo, | 
| 185 | 
  | 
  | 
 volume         = {20}, | 
| 186 | 
  | 
  | 
 pages          = {150--155}, | 
| 187 | 
  | 
  | 
                  } | 
| 188 | 
  | 
  | 
  | 
| 189 | 
  | 
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@Article{gen-eta:95, | 
| 190 | 
  | 
  | 
 author         = {P.R. Gent and J. Willebrand and T.J. McDougall | 
| 191 | 
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  | 
                  and J.C. McWilliams}, | 
| 192 | 
  | 
  | 
 year           = 1995, | 
| 193 | 
  | 
  | 
 title          = {Parameterizing eddy-induced tracer transports in  | 
| 194 | 
  | 
  | 
                  ocean circulation models}, | 
| 195 | 
  | 
  | 
 journal        = jpo, | 
| 196 | 
  | 
  | 
 volume         = {25}, | 
| 197 | 
  | 
  | 
 pages          = {463--474}, | 
| 198 | 
  | 
  | 
                  } | 
| 199 | 
  | 
  | 
  | 
| 200 | 
  | 
  | 
@Article{gie-kam:98, | 
| 201 | 
  | 
  | 
 author         = {R. Giering and T. Kaminski}, | 
| 202 | 
  | 
  | 
 year           = 1998, | 
| 203 | 
  | 
  | 
 title          = {Recipes for adjoint code construction}, | 
| 204 | 
  | 
  | 
 journal        = {ACM Transactions on Mathematical Software}, | 
| 205 | 
  | 
  | 
 volume         = 24, | 
| 206 | 
  | 
  | 
 pages          = {437--474}, | 
| 207 | 
  | 
  | 
                  } | 
| 208 | 
  | 
  | 
 | 
| 209 | 
  | 
  | 
@techreport{gie:99, | 
| 210 | 
  | 
  | 
 author         = {R. Giering}, | 
| 211 | 
  | 
  | 
 year           = 1999, | 
| 212 | 
  | 
  | 
 title          = {Tangent linear and Adjoint Model Compiler.  | 
| 213 | 
  | 
  | 
                  Users manual 1.4 (TAMC Version 5.2)}, | 
| 214 | 
  | 
  | 
 institution    = {Massachusetts Institute of Technology}, | 
| 215 | 
  | 
  | 
 type           = {Report}, | 
| 216 | 
  | 
  | 
 number         = {~}, | 
| 217 | 
  | 
  | 
 address        = {MIT/EAPS; 77 Massachusetts Ave.; Cambridge (MA) | 
| 218 | 
  | 
  | 
                  02139; USA}, | 
| 219 | 
  | 
  | 
 note           = {http://puddle.mit.edu/$\sim$ralf/tamc/tamc.html}, | 
| 220 | 
  | 
  | 
                  } | 
| 221 | 
  | 
  | 
  | 
| 222 | 
  | 
  | 
@incollection{gie:00, | 
| 223 | 
  | 
  | 
 author         = {R. Giering}, | 
| 224 | 
  | 
  | 
 editor         = {P. Kasibhatla and M. Heimann and P. Rayner and | 
| 225 | 
  | 
  | 
                  N. Mahowald and R.G. Prinn and D.E. Hartley}, | 
| 226 | 
  | 
  | 
 year           = 2000, | 
| 227 | 
  | 
  | 
 booktitle      = {Inverse methods in global biogeochemical cycles}, | 
| 228 | 
  | 
  | 
 title          = {Tangent linear and adjoint biogeochemical models}, | 
| 229 | 
  | 
  | 
 publisher      = {American Geophysical Union}, | 
| 230 | 
  | 
  | 
 series         = {Geophysical Monograph}, | 
| 231 | 
  | 
  | 
 volume         = {114}, | 
| 232 | 
  | 
  | 
 address        = {Washington, DC}, | 
| 233 | 
  | 
  | 
 pages          = {33--48}, | 
| 234 | 
  | 
  | 
                  } | 
| 235 | 
  | 
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 | 
| 236 | 
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  | 
@Article{gil-lem:89, | 
| 237 | 
  | 
  | 
 author         = {J.C. Gilbert and C. Lemar\'echal}, | 
| 238 | 
  | 
  | 
 year           = 1989, | 
| 239 | 
  | 
  | 
 title          = {Some numerical experiments with variable-storage | 
| 240 | 
  | 
  | 
                   quasi-Newton algorithms}, | 
| 241 | 
  | 
  | 
 journal        = {Math. Programming}, | 
| 242 | 
  | 
  | 
 volume         = {45}, | 
| 243 | 
  | 
  | 
 pages          = {407--435}, | 
| 244 | 
  | 
  | 
                  } | 
| 245 | 
  | 
  | 
  | 
| 246 | 
  | 
  | 
@book{gil-eta:81, | 
| 247 | 
  | 
  | 
 author         = {P.E. Gill and W. Murray and M.H. Wright}, | 
| 248 | 
  | 
  | 
 title          = {Practical optimization}, | 
| 249 | 
  | 
  | 
 year           = 1981, | 
| 250 | 
  | 
  | 
 publisher      = {Academic Press}, | 
| 251 | 
  | 
  | 
 address        = {London},  | 
| 252 | 
  | 
  | 
 pages          = {401 pp.}, | 
| 253 | 
  | 
  | 
                  } | 
| 254 | 
  | 
  | 
                                   | 
| 255 | 
heimbach | 
1.11 | 
@incollection{gri:89, | 
| 256 | 
  | 
  | 
 author         = {A. Griewank}, | 
| 257 | 
  | 
  | 
 year           = 1989, | 
| 258 | 
  | 
  | 
 title          = {On automatic differentiation}, | 
| 259 | 
  | 
  | 
 booktitle      = {Mathematical Programming: Recent Developments and | 
| 260 | 
  | 
  | 
                  Applications}, | 
| 261 | 
  | 
  | 
 pages          = {83--108}, | 
| 262 | 
  | 
  | 
 editor         = {M. Iri and K. Tanabe}, | 
| 263 | 
  | 
  | 
 publisher      = {Kluwer}, | 
| 264 | 
  | 
  | 
 address        = {Dordrecht, NL}, | 
| 265 | 
  | 
  | 
                  } | 
| 266 | 
  | 
  | 
  | 
| 267 | 
  | 
  | 
@Article{gri:92, | 
| 268 | 
  | 
  | 
  author =       {A.~Griewank}, | 
| 269 | 
  | 
  | 
  title =        {Achieving logarithmic growth of temporal and spatial | 
| 270 | 
  | 
  | 
  complexity in reverse {A}utomatic {D}ifferentiation}, | 
| 271 | 
  | 
  | 
  journal       = {Optimization Methods and Software}, | 
| 272 | 
  | 
  | 
  year          = {1992}, | 
| 273 | 
  | 
  | 
  volume        = {1}, | 
| 274 | 
  | 
  | 
  pages         = {35--54} | 
| 275 | 
  | 
  | 
} | 
| 276 | 
  | 
  | 
 | 
| 277 | 
heimbach | 
1.1 | 
@book{gri:00, | 
| 278 | 
  | 
  | 
 author         = {A. Griewank}, | 
| 279 | 
  | 
  | 
 title          = {Evaluating Derivatives. Principles and Techniques | 
| 280 | 
  | 
  | 
                  of Algorithmic Differentiation}, | 
| 281 | 
  | 
  | 
 year           = 2000, | 
| 282 | 
  | 
  | 
 series         = {Frontiers in Applied Mathematics}, | 
| 283 | 
  | 
  | 
 volume         = {19}, | 
| 284 | 
  | 
  | 
 publisher      = {SIAM}, | 
| 285 | 
  | 
  | 
 address        = {Philadelphia},  | 
| 286 | 
  | 
  | 
 pages          = {369 pp.}, | 
| 287 | 
  | 
  | 
                  } | 
| 288 | 
  | 
  | 
                                   | 
| 289 | 
  | 
  | 
@Article{hal-eta:82, | 
| 290 | 
  | 
  | 
 author         = {M.C.G. Hall and D.G. Caccuci and M.E. Schlesinger}, | 
| 291 | 
  | 
  | 
 year           = 1982, | 
| 292 | 
  | 
  | 
 title          = {Sensitivity analysis of a radiative-convective | 
| 293 | 
  | 
  | 
                  model by the adjoint method}, | 
| 294 | 
  | 
  | 
 journal        = jas, | 
| 295 | 
  | 
  | 
 volume         = {39}, | 
| 296 | 
  | 
  | 
 pages          = {2038--3050}, | 
| 297 | 
  | 
  | 
                  } | 
| 298 | 
cnh | 
1.6 | 
 | 
| 299 | 
  | 
  | 
@Article{Haney, | 
| 300 | 
  | 
  | 
  author =       {R.L. Haney}, | 
| 301 | 
  | 
  | 
  title =        {Surface thermal boundary conditions for ocean | 
| 302 | 
  | 
  | 
                  circulation models}, | 
| 303 | 
  | 
  | 
  journal =      jpo, | 
| 304 | 
  | 
  | 
  year =         1971, | 
| 305 | 
  | 
  | 
  volume =       1, | 
| 306 | 
  | 
  | 
  pages =        {241--248} | 
| 307 | 
  | 
  | 
} | 
| 308 | 
heimbach | 
1.1 | 
  | 
| 309 | 
cnh | 
1.16 | 
@Article{held-suar:94, | 
| 310 | 
  | 
  | 
 author         = {I.M. Held and M.J. Suarez}, | 
| 311 | 
  | 
  | 
 year           = {1994}, | 
| 312 | 
  | 
  | 
 title          = {A proposal for the intercomparison of the dynamical cores of atmospheric general circulation models}, | 
| 313 | 
  | 
  | 
 journal        = {Bulletin of the American Meteorological Society}, | 
| 314 | 
  | 
  | 
 volume         = {75(10)}, | 
| 315 | 
  | 
  | 
 pages          = {1825-1830} | 
| 316 | 
  | 
  | 
} | 
| 317 | 
  | 
  | 
  | 
| 318 | 
heimbach | 
1.1 | 
@Article{hil-eta:01, | 
| 319 | 
  | 
  | 
 author         = {C. Hill and M. Follows and V. Bugnion and  | 
| 320 | 
  | 
  | 
                  J. Marshall}, | 
| 321 | 
cnh | 
1.10 | 
 year           = {2002}, | 
| 322 | 
heimbach | 
1.1 | 
 title          = {Spatial and Temporal Impacts of ocean general  | 
| 323 | 
  | 
  | 
                  circulation on carbon sequestration}, | 
| 324 | 
cnh | 
1.6 | 
 journal        = {Global Biogeochemical Cycles}, | 
| 325 | 
heimbach | 
1.1 | 
 note           = {submitted}, | 
| 326 | 
  | 
  | 
                  } | 
| 327 | 
cnh | 
1.6 | 
 | 
| 328 | 
edhill | 
1.15 | 
@ARTICLE{hib80, | 
| 329 | 
  | 
  | 
  AUTHOR      = "W. D. {Hibler, III}", | 
| 330 | 
  | 
  | 
  TITLE       = "Modeling a Variable Thickness Sea Ice Cover", | 
| 331 | 
  | 
  | 
  JOURNAL     = mwr, | 
| 332 | 
  | 
  | 
  YEAR        = 1980, | 
| 333 | 
  | 
  | 
  VOLUME      = 1, | 
| 334 | 
  | 
  | 
  PAGES       = "1943-1973" | 
| 335 | 
  | 
  | 
} | 
| 336 | 
  | 
  | 
 | 
| 337 | 
cnh | 
1.6 | 
@Article{Holland75, | 
| 338 | 
  | 
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 author         = {W.R. Holland and L. B. Lin}, | 
| 339 | 
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 year           = {1975a}, | 
| 340 | 
  | 
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 title          = {On the origin of mesoscale eddies and their contribution  | 
| 341 | 
  | 
  | 
                   to the general circulation of the ocean. I. A preliminary  | 
| 342 | 
  | 
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                   numerical experiment}, | 
| 343 | 
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 journal        = jpo, | 
| 344 | 
  | 
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 volume         = {5}, | 
| 345 | 
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 pages          = {642-657} | 
| 346 | 
  | 
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                  } | 
| 347 | 
  | 
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 | 
| 348 | 
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@Article{hol-lin:75b, | 
| 349 | 
  | 
  | 
 author         = {W.R. Holland and L. B. Lin}, | 
| 350 | 
  | 
  | 
 year           = {1975b}, | 
| 351 | 
  | 
  | 
 title          = {On the origin of mesoscale eddies and their contribution  | 
| 352 | 
  | 
  | 
                   to the general circulation of the ocean. II. A parameter | 
| 353 | 
  | 
  | 
                   study}, | 
| 354 | 
  | 
  | 
 journal        = jpo, | 
| 355 | 
  | 
  | 
 volume         = {5}, | 
| 356 | 
  | 
  | 
 pages          = {658-669} | 
| 357 | 
  | 
  | 
                  } | 
| 358 | 
  | 
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 | 
| 359 | 
heimbach | 
1.1 | 
@book{kas-eta:00, | 
| 360 | 
  | 
  | 
 author         = {P. Kasibhatla and M. Heimann and P. Rayner and | 
| 361 | 
  | 
  | 
                  N. Mahowald and R.G. Prinn and D.E. Hartley}, | 
| 362 | 
  | 
  | 
 year           = 2000, | 
| 363 | 
  | 
  | 
 title          = {Inverse methods in global biogeochemical cycles}, | 
| 364 | 
  | 
  | 
 publisher      = {American Geophysical Union}, | 
| 365 | 
  | 
  | 
 series         = {Geophysical Monograph}, | 
| 366 | 
  | 
  | 
 volume         = {114}, | 
| 367 | 
  | 
  | 
 address        = {Washington, DC}, | 
| 368 | 
  | 
  | 
 pages          = {324 pp.}, | 
| 369 | 
  | 
  | 
                  } | 
| 370 | 
  | 
  | 
 | 
| 371 | 
  | 
  | 
@Article{lar-eta:94, | 
| 372 | 
  | 
  | 
 author         = {W.G. Large and J.C. McWilliams and S.C. Doney}, | 
| 373 | 
  | 
  | 
 year           = 1994, | 
| 374 | 
  | 
  | 
 title          = {Oceanic vertical mixing: A review and a model | 
| 375 | 
  | 
  | 
                  with nonlocal boundary layer parameterization}, | 
| 376 | 
  | 
  | 
 journal        = {Rev.~Geophys.}, | 
| 377 | 
  | 
  | 
 volume         = {32}, | 
| 378 | 
  | 
  | 
 pages          = {363--403}, | 
| 379 | 
  | 
  | 
                  } | 
| 380 | 
  | 
  | 
  | 
| 381 | 
  | 
  | 
@Article{lar-eta:97, | 
| 382 | 
  | 
  | 
 author         = {W.G. Large and G. Danabasoglu and S.C. Doney  | 
| 383 | 
  | 
  | 
                  and J.C. McWilliams}, | 
| 384 | 
  | 
  | 
 year           = 1997, | 
| 385 | 
  | 
  | 
 title          = {Sensitivity to surface forcing and boundary layer | 
| 386 | 
  | 
  | 
                  mixing in a global ocean model: annual-mean | 
| 387 | 
  | 
  | 
                  climatology}, | 
| 388 | 
  | 
  | 
 journal        = jpo, | 
| 389 | 
  | 
  | 
 volume         = {27}, | 
| 390 | 
  | 
  | 
 pages          = {2418--2447}, | 
| 391 | 
  | 
  | 
                  } | 
| 392 | 
  | 
  | 
  | 
| 393 | 
  | 
  | 
@Article{led-tal:86, | 
| 394 | 
  | 
  | 
 author         = {F.-X. {Le Dimet} and O. Talagrand}, | 
| 395 | 
  | 
  | 
 year           = 1986, | 
| 396 | 
  | 
  | 
 title          = {Variational algorithms for analysis and | 
| 397 | 
  | 
  | 
                  assimilation of meteorological observations: | 
| 398 | 
  | 
  | 
                  theoretical aspects}, | 
| 399 | 
  | 
  | 
 journal        = tel, | 
| 400 | 
  | 
  | 
 volume         = {38A}, | 
| 401 | 
  | 
  | 
 pages          = {97--110}, | 
| 402 | 
  | 
  | 
                  } | 
| 403 | 
cnh | 
1.6 | 
 | 
| 404 | 
  | 
  | 
@TechReport{lev:94a, | 
| 405 | 
  | 
  | 
  author =       {S. Levitus and T.P.Boyer}, | 
| 406 | 
  | 
  | 
  title =        {{World Ocean Atlas 1994 Volume 3: Salinity}}, | 
| 407 | 
  | 
  | 
  institution =  {NOAA Atlas NESDIS 3}, | 
| 408 | 
  | 
  | 
  year =         1994, | 
| 409 | 
  | 
  | 
  OPTkey =       {}, | 
| 410 | 
  | 
  | 
  OPTtype =      {}, | 
| 411 | 
  | 
  | 
  OPTnumber =    {}, | 
| 412 | 
  | 
  | 
  OPTaddress =   {U.S. Department of Commerce, Washington D.C.}, | 
| 413 | 
  | 
  | 
  OPTmonth =     {}, | 
| 414 | 
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  OPTnote =      {}, | 
| 415 | 
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  | 
  OPTannote =    {} | 
| 416 | 
  | 
  | 
} | 
| 417 | 
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 | 
| 418 | 
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 | 
| 419 | 
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@TechReport{Levitus94, | 
| 420 | 
  | 
  | 
  author =       {S. Levitus and T.P.Boyer}, | 
| 421 | 
  | 
  | 
  title =        {{World Ocean Atlas 1994 Volume 4: Temperature}}, | 
| 422 | 
  | 
  | 
  institution =  {NOAA Atlas NESDIS 4}, | 
| 423 | 
  | 
  | 
  year =         1994, | 
| 424 | 
  | 
  | 
  OPTkey =       {}, | 
| 425 | 
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  OPTtype =      {}, | 
| 426 | 
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  OPTnumber =    {}, | 
| 427 | 
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  | 
  OPTaddress =   {U.S. Department of Commerce, Washington D.C.}, | 
| 428 | 
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  OPTmonth =     {}, | 
| 429 | 
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  OPTnote =      {}, | 
| 430 | 
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  OPTannote =    {} | 
| 431 | 
  | 
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} | 
| 432 | 
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 | 
| 433 | 
heimbach | 
1.1 | 
  | 
| 434 | 
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@Article{lew-der:85, | 
| 435 | 
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 author         = {J. Lewis and J. Derber}, | 
| 436 | 
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  | 
 year           = {1985}, | 
| 437 | 
  | 
  | 
 title          = {The use of adjoint equations to solve a variational | 
| 438 | 
  | 
  | 
                  adjustment problem with advective constraints}, | 
| 439 | 
  | 
  | 
 journal        = {Tellus}, | 
| 440 | 
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  | 
 volume         = {37A}, | 
| 441 | 
  | 
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 pages          = {309--322}, | 
| 442 | 
  | 
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                  } | 
| 443 | 
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  | 
| 444 | 
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@techreport{lon:88, | 
| 445 | 
  | 
  | 
 author         = {R.B. Long}, | 
| 446 | 
  | 
  | 
 year           = 1988, | 
| 447 | 
  | 
  | 
 title          = {Notes on assimilating observations into | 
| 448 | 
  | 
  | 
                  numerical models}, | 
| 449 | 
  | 
  | 
 institution    = {Delft Hydraulics}, | 
| 450 | 
  | 
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 type           = {Report}, | 
| 451 | 
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  | 
 number         = {~}, | 
| 452 | 
  | 
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 pages          = {38 pp.}, | 
| 453 | 
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 address        = {Delft (NL)}, | 
| 454 | 
  | 
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                  } | 
| 455 | 
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| 456 | 
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@Article{maro-wun:93, | 
| 457 | 
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 author         = {J. Marotzke and C. Wunsch}, | 
| 458 | 
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 year           = 1993, | 
| 459 | 
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  | 
 title          = {Finding the steady state of a general circulation | 
| 460 | 
  | 
  | 
                  model through data assimilation: | 
| 461 | 
  | 
  | 
                  Application to the North Atlantic Ocean}, | 
| 462 | 
  | 
  | 
 journal        = jgr, | 
| 463 | 
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 volume         = {98, C11}, | 
| 464 | 
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  | 
 pages          = {20,149--20,167}, | 
| 465 | 
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                  } | 
| 466 | 
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| 467 | 
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@Article{maro-eta:99, | 
| 468 | 
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 author         = {J. Marotzke and R. Giering and K.Q. Zhang and  | 
| 469 | 
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  | 
                  D. Stammer and C. Hill and T. Lee}, | 
| 470 | 
  | 
  | 
 year           = 1999, | 
| 471 | 
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 title          = {Construction of the adjoint MIT ocean general | 
| 472 | 
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                  circulation model and application to Atlantic heat | 
| 473 | 
  | 
  | 
                  transport variability}, | 
| 474 | 
  | 
  | 
 journal        = jgr, | 
| 475 | 
  | 
  | 
 volume         = {104, C12}, | 
| 476 | 
  | 
  | 
 pages          = {29,529--29,547}, | 
| 477 | 
  | 
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                  } | 
| 478 | 
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  | 
| 479 | 
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@Article{mars-eta:97a, | 
| 480 | 
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| 481 | 
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  | 
                  A. Adcroft}, | 
| 482 | 
  | 
  | 
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| 483 | 
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  | 
 title          = {Hydrostatic, quasi-hydrostatic and | 
| 484 | 
  | 
  | 
                  nonhydrostatic ocean modeling}, | 
| 485 | 
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  | 
 journal        = jgr, | 
| 486 | 
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| 487 | 
  | 
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 pages          = {5,733--5,752}, | 
| 488 | 
  | 
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                  } | 
| 489 | 
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@Article{mars-eta:97b, | 
| 491 | 
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 author         = {J. Marshall and A. Adcroft and C. Hill and  | 
| 492 | 
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                  L. Perelman and C. Heisey}, | 
| 493 | 
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  | 
 year           = {1997b}, | 
| 494 | 
  | 
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 title          = {Hydrostatic, quasi-hydrostatic and | 
| 495 | 
  | 
  | 
                  nonhydrostatic ocean modeling}, | 
| 496 | 
  | 
  | 
 journal        = jgr, | 
| 497 | 
  | 
  | 
 volume         = {102, C3}, | 
| 498 | 
  | 
  | 
 pages          = {5,753--5,766}, | 
| 499 | 
  | 
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                  } | 
| 500 | 
  | 
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  | 
| 501 | 
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@Article{mars-sha:98, | 
| 502 | 
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 author         = {J. Marshall and H. Jones and C. Hill}, | 
| 503 | 
  | 
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 year           = 1998, | 
| 504 | 
  | 
  | 
 title          = {Efficient ocean modeling using | 
| 505 | 
  | 
  | 
                  non-hydrostatic algorithms}, | 
| 506 | 
  | 
  | 
 journal        = jms, | 
| 507 | 
  | 
  | 
 volume         = {18}, | 
| 508 | 
  | 
  | 
 pages          = {115--134}, | 
| 509 | 
  | 
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                  } | 
| 510 | 
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  | 
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@Article{mcw:96, | 
| 512 | 
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 author         = {J. McWilliams}, | 
| 513 | 
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  | 
 year           = 1996, | 
| 514 | 
  | 
  | 
 title          = {Modeling the oceanic general circulation}, | 
| 515 | 
  | 
  | 
 journal        = arfm, | 
| 516 | 
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  | 
 volume         = {28}, | 
| 517 | 
  | 
  | 
 pages          = {215--248}, | 
| 518 | 
  | 
  | 
                  } | 
| 519 | 
edhill | 
1.13 | 
 | 
| 520 | 
  | 
  | 
%% Rew, R. K., G. P. Davis, S. Emmerson, and H. Davies | 
| 521 | 
  | 
  | 
%% NetCDF User's Guide for C, An Interface for Data Access, Version 3, April 1997. | 
| 522 | 
  | 
  | 
%% (Available from Unidata or in PostScript form by anonymous FTP from  | 
| 523 | 
  | 
  | 
%%   ftp://ftp.unidata.ucar.edu/pub/netcdf/guidec.ps.Z). There is also  | 
| 524 | 
  | 
  | 
%%   a hypertext version of the User's Guide available at  | 
| 525 | 
  | 
  | 
%%   http://www.unidata.ucar.edu/packages/netcdf/guidec. NetCDF User's  | 
| 526 | 
  | 
  | 
%%   Guide for Fortran 90 and NetCDF User's Guide for Fortran 77 are  | 
| 527 | 
  | 
  | 
%%   also available. | 
| 528 | 
  | 
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 | 
| 529 | 
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  | 
@TechReport{rew:97, | 
| 530 | 
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  author =       {R. K. Rew and G. P. Davis and S. Emmerson and H. Davies}, | 
| 531 | 
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  | 
  title =        {{NetCDF User's Guide for C, FORTRAN 77, and FORTRAN 90},  | 
| 532 | 
  | 
  | 
                  An Interface for Data Access, Version 3}, | 
| 533 | 
  | 
  | 
  institution =  {Unidata Program Center}, | 
| 534 | 
  | 
  | 
  type =         {Report}, | 
| 535 | 
  | 
  | 
  address =      {Boulder, Colorado}, | 
| 536 | 
  | 
  | 
  year =         1997, | 
| 537 | 
  | 
  | 
  note =         {http://www.unidata.ucar.edu/packages/netcdf/}, | 
| 538 | 
  | 
  | 
} | 
| 539 | 
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  | 
 | 
| 540 | 
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 | 
| 541 | 
heimbach | 
1.1 | 
@Article{res-eta:98, | 
| 542 | 
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 author         = {J.M. Restrepo and G.K. Leaf and A. Griewank}, | 
| 543 | 
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 year           = 1998, | 
| 544 | 
cnh | 
1.5 | 
 title          = {Circumventing storage limitations in variational | 
| 545 | 
heimbach | 
1.1 | 
                  data assimilation studies}, | 
| 546 | 
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 journal        = {SIAM J. Sci. Comput.}, | 
| 547 | 
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 volume         = {19}, | 
| 548 | 
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 pages          = {1586--1605}, | 
| 549 | 
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| 550 | 
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@Article{ros-eta:93, | 
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 author         = {N. Rostaing and S. Dalmas and A. Galligo}, | 
| 553 | 
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 year           = 1993, | 
| 554 | 
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 title          = {Automatic differentiation in Odyss{\'e}e}, | 
| 555 | 
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 journal        = {Tellus}, | 
| 556 | 
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 volume         = {45A}, | 
| 557 | 
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 pages          = {558--568}, | 
| 558 | 
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                  } | 
| 559 | 
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@incollection{she-and:89, | 
| 561 | 
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 author         = {J. Sheinbaum and D.L.T. Anderson}, | 
| 562 | 
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 year           = 1989, | 
| 563 | 
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 title          = {Assimilation of XBT data using a variational  | 
| 564 | 
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                  technique}, | 
| 565 | 
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 booktitle      = {Oceanic circulation models: | 
| 566 | 
  | 
  | 
                  Combining data and dynamics}, | 
| 567 | 
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 pages          = {257--285}, | 
| 568 | 
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 series         = {NATO ASI Series}, | 
| 569 | 
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 volume         = {C 284}, | 
| 570 | 
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 editor         = {{D.L.T. Anderson and J. Willebrand}}, | 
| 571 | 
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 publisher      = {Springer-Verlag}, | 
| 572 | 
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 address        = {Berlin (Germany)}, | 
| 573 | 
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                  } | 
| 574 | 
cnh | 
1.6 | 
 | 
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@Article{DaSilva94, | 
| 576 | 
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 author         = {A. da Silva and A. C. Young and S. Levitus}, | 
| 577 | 
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 year           = 1994, | 
| 578 | 
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 title          = {Atlas of Surface Marine Data 1994, Volume 1: Algorithms and Procedures}, | 
| 579 | 
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| 580 | 
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 volume         = {6}, | 
| 581 | 
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 publisher      = {U.S. Department of Commerce}, | 
| 582 | 
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 address        = {Washington, D.C. (USA)}, | 
| 583 | 
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 note           = {http:////ingrid.ldeo.columbia.edu/SOURCES/.DASILVA/.SMD94/}, | 
| 584 | 
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                  } | 
| 585 | 
heimbach | 
1.1 | 
  | 
| 586 | 
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@techreport{sta-eta:97, | 
| 587 | 
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 author         = {D. Stammer and C. Wunsch and R. Giering and | 
| 588 | 
cnh | 
1.6 | 
                  Q. Zhang and J. Marotzke and J. Marshall and | 
| 589 | 
heimbach | 
1.1 | 
                  C. Hill}, | 
| 590 | 
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 year           = 1997, | 
| 591 | 
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 title          = {The global ocean circulation estimated from  | 
| 592 | 
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                  TOPEX/POSEIDON altimetry and a general circulation | 
| 593 | 
  | 
  | 
                  model}, | 
| 594 | 
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  | 
 institution    = {Center for Global Change Science, Massachusetts | 
| 595 | 
  | 
  | 
                  Institute of Technology}, | 
| 596 | 
  | 
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 type           = {Technical Report}, | 
| 597 | 
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 number         = {49}, | 
| 598 | 
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 pages          = {40 pp.}, | 
| 599 | 
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 address        = {Cambridge (MA), USA}, | 
| 600 | 
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                  } | 
| 601 | 
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| 602 | 
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@Article{sta-eta:01, | 
| 603 | 
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 author         = {D. Stammer and C. Wunsch and R. Giering and | 
| 604 | 
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                  C. Eckert and P. Heimbach and J. Marotzke and | 
| 605 | 
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                  A. Adcroft and C. Hill and J. Marshall}, | 
| 606 | 
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 year           = 2001, | 
| 607 | 
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 title          = {The global ocean circulation during 1992 -- 1997, | 
| 608 | 
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                  estimated from ocean observations and a general | 
| 609 | 
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                  circulation model}, | 
| 610 | 
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 journal        = jgr, | 
| 611 | 
cnh | 
1.6 | 
 note           = {in press}, | 
| 612 | 
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| 613 | 
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@Article{Stommel66, | 
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 author         = {H. Stommel}, | 
| 616 | 
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 year           = 1948, | 
| 617 | 
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 title          = {The western intensification of wind-driven ocean currents}, | 
| 618 | 
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| 619 | 
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| 620 | 
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| 621 | 
heimbach | 
1.1 | 
                  } | 
| 622 | 
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@Article{tal-cou:87, | 
| 624 | 
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 author         = {O. Talagrand and P. Courtier}, | 
| 625 | 
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 year           = 1987, | 
| 626 | 
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 title          = {Variational assimilation of meteorological  | 
| 627 | 
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  | 
                  observations with the adjoint vorticity equation. | 
| 628 | 
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  | 
                  I: Theory}, | 
| 629 | 
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 journal        = qjrms, | 
| 630 | 
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 volume         = {113}, | 
| 631 | 
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| 633 | 
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@Article{tal:97, | 
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| 636 | 
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| 637 | 
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 title          = {Assimilation of observations, an introduction}, | 
| 638 | 
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| 639 | 
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| 640 | 
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@book{tar:87, | 
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| 645 | 
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 title          = {Inverse Problem Theory: Methods for data fitting | 
| 646 | 
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                  and model parameter estimation}, | 
| 647 | 
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| 648 | 
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| 649 | 
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| 668 | 
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| 671 | 
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| 720 | 
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                  model. I: A North Atlantic model}, | 
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  | 
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                  Indian Ocean GCM-data synthesis}, | 
| 750 | 
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adcroft | 
1.2 | 
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@InCollection{hill:95, | 
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  title =        {Application of a Parallel Navier-Stokes Model to | 
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                  Ocean Circulation in Parallel Computational Fluid | 
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                  Dynamics}, | 
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| 765 | 
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  editor =       {A. Ecer, J. Periaux, N. Satofuka and S. Taylor} | 
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@Article{marshall:97a, | 
| 771 | 
adcroft | 
1.4 | 
  author =       {Marshall, J. and C. Hill and L. Perelman and A. Adcroft}, | 
| 772 | 
adcroft | 
1.2 | 
  title =        {Hydrostatic, quasi-hydrostatic, and nonhydrostatic ocean | 
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                 modeling}, | 
| 774 | 
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} | 
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@Article{marshall:97b, | 
| 782 | 
cnh | 
1.10 | 
  author =       {Marshall, J. and A. Adcroft and C. Hill and L. Perelman and C. Heisey}, | 
| 783 | 
adcroft | 
1.2 | 
  title =        {A finite-volume, incompressible Navier Stokes model for | 
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  | 
                  studies of the ocean on parallel computers}, | 
| 785 | 
  | 
  | 
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| 786 | 
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  year =         1997, | 
| 787 | 
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  volume =       102, | 
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  number =       {C3}, | 
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  pages =        {5753-5766} | 
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} | 
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@Article{adcroft:97, | 
| 793 | 
adcroft | 
1.4 | 
  author =       {Adcroft, A.J. and Hill, C.N. and J. Marshall}, | 
| 794 | 
adcroft | 
1.2 | 
  title =        {Representation of topography by shaved cells in a height | 
| 795 | 
  | 
  | 
                  coordinate ocean model}, | 
| 796 | 
  | 
  | 
  journal =      {MWR}, | 
| 797 | 
  | 
  | 
  year =         1997, | 
| 798 | 
  | 
  | 
  volume =       125, | 
| 799 | 
  | 
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  pages =        {2293-2315} | 
| 800 | 
  | 
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} | 
| 801 | 
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jmc | 
1.14 | 
@Article{adcroft:04, | 
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| 804 | 
  | 
  | 
  title =        {Re-scaled height coordinates for accurate representation | 
| 805 | 
  | 
  | 
                  of free-surface flows in ocean circulation models}, | 
| 806 | 
  | 
  | 
  journal =      om, | 
| 807 | 
  | 
  | 
  year =         2004, | 
| 808 | 
  | 
  | 
  note =         {in press} | 
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  | 
  | 
} | 
| 810 | 
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 | 
| 811 | 
adcroft | 
1.2 | 
@Article{visbeck:97, | 
| 812 | 
  | 
  | 
  author =       {Visbeck, M., J. Marshall, T. Haine, and M. Spall}, | 
| 813 | 
  | 
  | 
  title =        {Specification of eddy transfer coefficients in | 
| 814 | 
  | 
  | 
                  coarse-resolution ocean circulation models}, | 
| 815 | 
  | 
  | 
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| 816 | 
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  | 
  year =         1997, | 
| 817 | 
  | 
  | 
  volume =       27, | 
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  number =       3, | 
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  pages =        {381-402} | 
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} | 
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@Article{shaw:98, | 
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  author =       {Shaw; A. Arvind, Cho, K.-C., Hill, C., Johnson, R.P. | 
| 824 | 
  | 
  | 
                  and Marshall, J.}, | 
| 825 | 
  | 
  | 
  title =        {A comparison of implicitly parallel multi-threaded and | 
| 826 | 
  | 
  | 
                  data-parallel implementations of an ocean model based | 
| 827 | 
  | 
  | 
                  on the Navier-Stokes equations}, | 
| 828 | 
  | 
  | 
  journal =      {J. of Parallel and Distributed Computing}, | 
| 829 | 
  | 
  | 
  year =         1998, | 
| 830 | 
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  volume =       48, | 
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  number =       1, | 
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} | 
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@Article{marshall:98, | 
| 836 | 
cnh | 
1.10 | 
  author =       {J. Marshall and H. Jones and C. Hill}, | 
| 837 | 
adcroft | 
1.2 | 
  title =        {Efficient ocean modeling using non-hydrostatic algorithms}, | 
| 838 | 
  | 
  | 
  journal =      {JMR}, | 
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@Article{mjn:99, | 
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  author =       {Marshall, J., Jamous, D and J. Nilsson}, | 
| 846 | 
  | 
  | 
  title =        {Reconciling `thermodynamic' and `dynamic' methods of | 
| 847 | 
  | 
  | 
                  computation of water-mass transformation rates}, | 
| 848 | 
  | 
  | 
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| 850 | 
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} | 
| 853 | 
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@Article{ms:99, | 
| 855 | 
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  | 
  author =       {Marshall, J and F. Schott}, | 
| 856 | 
  | 
  | 
  title =        {Open ocean deep convection: observations, models and theory}, | 
| 857 | 
  | 
  | 
  journal =      {Rev. Geophys.}, | 
| 858 | 
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  | 
  year =         1999, | 
| 859 | 
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  volume =       37, | 
| 860 | 
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  number =       1, | 
| 861 | 
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  pages =        {1-64} | 
| 862 | 
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} | 
| 863 | 
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@Article{adcroft:99, | 
| 865 | 
  | 
  | 
  author =       {Adcroft, A., Hill C. and J. Marshall}, | 
| 866 | 
  | 
  | 
  title =        {A new treatment of the Coriolis terms in C-grid models | 
| 867 | 
  | 
  | 
                  at both high and low resolutions}, | 
| 868 | 
  | 
  | 
  journal =      {MWR}, | 
| 869 | 
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  | 
  year =         1999, | 
| 870 | 
  | 
  | 
  volume =       127, | 
| 871 | 
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  pages =        {1928-1936} | 
| 872 | 
  | 
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} | 
| 873 | 
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  | 
  | 
@InProceedings{hill:99, | 
| 875 | 
  | 
  | 
  author =       {Chris Hill, Alistair Adcroft, Daniel Jamous and John Marshall}, | 
| 876 | 
  | 
  | 
  title =        {A Strategy for Terascale Climate Modeling}, | 
| 877 | 
cnh | 
1.8 | 
  booktitle =    {In Proceedings of the Eighth ECMWF Workshop on the Use of Parallel Processors in Meteorology}, | 
| 878 | 
cnh | 
1.9 | 
  year =         1999, | 
| 879 | 
  | 
  | 
  pages = {406-425}, | 
| 880 | 
  | 
  | 
  publisher =    {World Scientific}, | 
| 881 | 
adcroft | 
1.2 | 
} | 
| 882 | 
  | 
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 | 
| 883 | 
  | 
  | 
@Article{wardle:00, | 
| 884 | 
  | 
  | 
  author =       {Wardle R. and Marshall J.}, | 
| 885 | 
  | 
  | 
  title =        {Representation of eddies in primitive equation models by a PV flux}, | 
| 886 | 
  | 
  | 
  journal =      {JPO}, | 
| 887 | 
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  | 
  year =         2000, | 
| 888 | 
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  volume =       30, | 
| 889 | 
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  number =       10, | 
| 890 | 
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| 891 | 
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} | 
| 892 | 
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@Article{ac:02, | 
| 894 | 
  | 
  | 
  author =       {Adcroft, A. and J.-M. Campin}, | 
| 895 | 
  | 
  | 
  title =        {Comparison of finite volume schemes and direct-space-time | 
| 896 | 
  | 
  | 
                  methods for ocean circulation models}, | 
| 897 | 
jmc | 
1.14 | 
  journal =      om, | 
| 898 | 
adcroft | 
1.2 | 
  year =         2002, | 
| 899 | 
  | 
  | 
  note =         {in preparation} | 
| 900 | 
  | 
  | 
} | 
| 901 | 
  | 
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| 902 | 
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  | 
@Article{adcroft:02, | 
| 903 | 
  | 
  | 
  author =       {Adcroft et al.}, | 
| 904 | 
  | 
  | 
  title =        {Energy conversion in discrete numerical models}, | 
| 905 | 
jmc | 
1.14 | 
  journal =      om, | 
| 906 | 
adcroft | 
1.2 | 
  year =         2002, | 
| 907 | 
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  note =         {in preparation} | 
| 908 | 
  | 
  | 
} | 
| 909 | 
  | 
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| 910 | 
  | 
  | 
@InCollection{arakawa:77, | 
| 911 | 
  | 
  | 
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| 912 | 
  | 
  | 
  title =        {Computational Design of the Basic Dynamical Processes of | 
| 913 | 
  | 
  | 
                  the UCLA General Circulation Model}, | 
| 914 | 
  | 
  | 
  booktitle =    {Methods in Computational Physics}, | 
| 915 | 
  | 
  | 
  pages =        {174-267}, | 
| 916 | 
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  | 
  publisher =    {Academic Press}, | 
| 917 | 
  | 
  | 
  year =         1977, | 
| 918 | 
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  | 
  volume =       17 | 
| 919 | 
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} | 
| 920 | 
  | 
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 | 
| 921 | 
  | 
  | 
@Article{adcroft:98, | 
| 922 | 
  | 
  | 
  author =       {Adcroft, A. and Marshall, D.}, | 
| 923 | 
adcroft | 
1.3 | 
  title =        {How slippery are piecewise-constant coastlines in numerical | 
| 924 | 
  | 
  | 
                  ocean models?}, | 
| 925 | 
adcroft | 
1.2 | 
  journal =      {Tellus}, | 
| 926 | 
adcroft | 
1.3 | 
  year =         1998, | 
| 927 | 
  | 
  | 
  volume =       50, | 
| 928 | 
  | 
  | 
  number =       1, | 
| 929 | 
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  pages =        {95-108} | 
| 930 | 
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} | 
| 931 | 
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 | 
| 932 | 
  | 
  | 
@PhdThesis{adcroft:95, | 
| 933 | 
  | 
  | 
  author =       {Adcroft, A.}, | 
| 934 | 
  | 
  | 
  title =        {Numerical Algorithms for use in a Dynamical Model of the | 
| 935 | 
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                  Ocean}, | 
| 936 | 
  | 
  | 
  school =       {Imperial College, London}, | 
| 937 | 
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  | 
  year =         1995 | 
| 938 | 
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} | 
| 939 | 
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@Article{griffies:00, | 
| 941 | 
  | 
  | 
  author =       {Griffies, S.,M. and Hallberg, R.,W.}, | 
| 942 | 
  | 
  | 
  title =        {Biharmonic friction with a Smagorinsky-like viscosity for | 
| 943 | 
  | 
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                  use in large-scale eddy-permitting ocean models}, | 
| 944 | 
  | 
  | 
  journal =      {MWR}, | 
| 945 | 
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  year =         2000, | 
| 946 | 
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| 950 | 
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@Article{wajsowicz:93, | 
| 952 | 
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| 953 | 
  | 
  | 
  title =        {A CONSISTENT FORMULATION OF THE ANISOTROPIC STRESS TENSOR | 
| 954 | 
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  | 
                  FOR USE IN MODELS OF THE LARGE-SCALE OCEAN CIRCULATION}, | 
| 955 | 
  | 
  | 
  journal =      {JCP}, | 
| 956 | 
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  | 
  year =         1993, | 
| 957 | 
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| 958 | 
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| 960 | 
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} | 
| 961 | 
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| 962 | 
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@Article{campin:02, | 
| 963 | 
jmc | 
1.14 | 
  author =       {Campin, J.-M. and A. Adcroft and C. Hill and J. Marshall}, | 
| 964 | 
adcroft | 
1.3 | 
  title =        {Conservation of properties in a free-surface model}, | 
| 965 | 
jmc | 
1.14 | 
  journal =      om, | 
| 966 | 
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| 967 | 
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| 968 | 
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| 969 | 
adcroft | 
1.4 | 
} | 
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