MITgcm/manual/manual.tex

% $Header: /u/gcmpack/mitgcmdoc/manual.tex,v 1.2 2001/08/08 22:14:44 adcroft Exp $
% $Name:  $

\documentclass[12pt]{book}

\usepackage{amsfonts}
\usepackage{amsmath}
\usepackage{html}
\usepackage{epsfig}
\usepackage{graphics,subfigure}
\usepackage{array}
\usepackage{multirow}
\usepackage{fancyhdr}
\usepackage{psfrag}
%\usepackage{oldgerm}
% I commented the following because it introduced excessive white space
%\usepackage{palatcm}              % better PDF 

% page headers and footers
%\pagestyle{fancy}
\fancyhead{}
\fancyhead[LO]{\slshape \rightmark}
\fancyhead[RE]{\slshape \leftmark}
\fancyhead[RO,LE]{\thepage}
\fancyfoot[CO,CE]{\today}
\fancyfoot[RO,LE]{ }
\renewcommand{\headrulewidth}{0.4pt}
\renewcommand{\footrulewidth}{0.4pt}

% referencing
\newcommand{\refequ}[1]{equation (\ref{equ:#1})}
\newcommand{\refequbig}[1]{Equation (\ref{equ:#1})}
\newcommand{\reftab}[1]{Tab.~\ref{tab:#1}}
\newcommand{\reftabno}[1]{\ref{tab:#1}}
\newcommand{\reffig}[1]{Fig.~\ref{fig:#1}}
\newcommand{\reffigno}[1]{\ref{fig:#1}}

% stuff for psfrag
\newcommand{\textinfigure}[1]{{\footnotesize\textbf{\textsf{#1}}}}
\newcommand{\mathinfigure}[1]{\small\ensuremath{{#1}}}

% This allows numbering of subsubsections
\setcounter{secnumdepth}{3}
% This changes the the chapter title
%\renewcommand{\chaptername}{Section}


\begin{document}

\tableofcontents
\pagebreak

\part{The MIT GCM basics}

% Section: Overview
\input{part1/part1}
\pagebreak

% Section: Discretization and Algorithm
\input{part2/part2}
\pagebreak

% Section: Getting started
\input{part3/part3}
\pagebreak

% Section: Software Architecture
\input{part4/part4}
\pagebreak


\part{Adjoint of the MIT GCM}

% Section: Automatic Differentiation
\input{part5/part5}
\pagebreak


\part{Additional features}

% Section: Physical Packages
\input{part6/part6}
\pagebreak

% Section: Diagnostics
\input{part7/part7}
\pagebreak

% Section: ECCO Interface
\input{part8/part8}

\end{document}
1	% $Header: /u/gcmpack/mitgcmdoc/manual.tex,v 1.2 2001/08/08 22:14:44 adcroft Exp $
2	% $Name: $
3
4	\documentclass[12pt]{book}
5
6	\usepackage{amsfonts}
7	\usepackage{amsmath}
8	\usepackage{html}
9	\usepackage{epsfig}
10	\usepackage{graphics,subfigure}
11	\usepackage{array}
12	\usepackage{multirow}
13	\usepackage{fancyhdr}
14	\usepackage{psfrag}
15	%\usepackage{oldgerm}
16	% I commented the following because it introduced excessive white space
17	%\usepackage{palatcm} % better PDF
18
19	% page headers and footers
20	%\pagestyle{fancy}
21	\fancyhead{}
22	\fancyhead[LO]{\slshape \rightmark}
23	\fancyhead[RE]{\slshape \leftmark}
24	\fancyhead[RO,LE]{\thepage}
25	\fancyfoot[CO,CE]{\today}
26	\fancyfoot[RO,LE]{ }
27	\renewcommand{\headrulewidth}{0.4pt}
28	\renewcommand{\footrulewidth}{0.4pt}
29
30	% referencing
31	\newcommand{\refequ}[1]{equation (\ref{equ:#1})}
32	\newcommand{\refequbig}[1]{Equation (\ref{equ:#1})}
33	\newcommand{\reftab}[1]{Tab.~\ref{tab:#1}}
34	\newcommand{\reftabno}[1]{\ref{tab:#1}}
35	\newcommand{\reffig}[1]{Fig.~\ref{fig:#1}}
36	\newcommand{\reffigno}[1]{\ref{fig:#1}}
37
38	% stuff for psfrag
39	\newcommand{\textinfigure}[1]{{\footnotesize\textbf{\textsf{#1}}}}
40	\newcommand{\mathinfigure}[1]{\small\ensuremath{{#1}}}
41
42	% This allows numbering of subsubsections
43	\setcounter{secnumdepth}{3}
44	% This changes the the chapter title
45	%\renewcommand{\chaptername}{Section}
46
47
48
49	\begin{document}
50
51	\tableofcontents
52	\pagebreak
53
54	\part{The MIT GCM basics}
55
56	% Section: Overview
57	\input{part1/part1}
58	\pagebreak
59
60	% Section: Discretization and Algorithm
61	\input{part2/part2}
62	\pagebreak
63
64	% Section: Getting started
65	\input{part3/part3}
66	\pagebreak
67
68	% Section: Software Architecture
69	\input{part4/part4}
70	\pagebreak
71
72
73	\part{Adjoint of the MIT GCM}
74
75	% Section: Automatic Differentiation
76	\input{part5/part5}
77	\pagebreak
78
79
80	\part{Additional features}
81
82	% Section: Physical Packages
83	\input{part6/part6}
84	\pagebreak
85
86	% Section: Diagnostics
87	\input{part7/part7}
88	\pagebreak
89
90	% Section: ECCO Interface
91	\input{part8/part8}
92
93	\end{document}